BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00019896
         (388 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]        63   4e-08
gb|EMT09823.1| hypothetical protein F775_07530 [Aegilops tauschii]     60   4e-07
gb|EMS63072.1| hypothetical protein TRIUR3_17311 [Triticum urartu]     60   4e-07
gb|EOX92255.1| Pentatricopeptide repeat (PPR) superfamily protei...    59   7e-07
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|XP_002451732.1| hypothetical protein SORBIDRAFT_04g006810 [S...    58   1e-06
ref|XP_004954664.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus...    57   3e-06
ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [S...    57   3e-06
ref|XP_002887500.1| pentatricopeptide repeat-containing protein ...    57   3e-06
gb|EMJ16204.1| hypothetical protein PRUPE_ppa002414mg [Prunus pe...    56   4e-06
gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]         56   4e-06
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...    55   7e-06

>gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]
          Length = 627

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/113 (30%), Positives = 60/113 (53%)
 Frame = -2

Query: 381 FSDMVASGCKPDCKVLQALVLHLCKKERGMDAYNLVRKAVVELKIQPSHPTYVELFRELI 202
           F+ M+  G  PD  +L+A+V  L KK R  DA+ L+ +   +LK++P   T+  L ++L+
Sbjct: 469 FARMMEKGFDPDADLLEAIVDELSKKSRAPDAFRLLVELAEKLKLRPWQSTFKNLIQQLL 528

Query: 201 RSSMVKEVCEIFGLMKEYNHASDGYYPIIMRQIIHFLARRGTLEDASSFLSKL 43
                +E   +  +MK  N      YP      + ++++ G+++DA  FLS L
Sbjct: 529 DGRRFEEAVRLLAMMKRQN------YPPHCEPFVDYVSKFGSVDDALEFLSSL 575


>gb|EMT09823.1| hypothetical protein F775_07530 [Aegilops tauschii]
          Length = 595

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/101 (33%), Positives = 57/101 (56%)
 Frame = -2

Query: 336 LQALVLHLCKKERGMDAYNLVRKAVVELKIQPSHPTYVELFRELIRSSMVKEVCEIFGLM 157
           L+ALV  LC+K+   +A+ +++  V++  + P   TY  L  +LIR   +KE  ++ GLM
Sbjct: 444 LEALVYGLCRKKEAKEAFKVLKDLVLKKDVVPWQSTYKYLIHKLIRQGHLKEAFDVLGLM 503

Query: 156 KEYNHASDGYYPIIMRQIIHFLARRGTLEDASSFLSKLKKD 34
           K     S+G+ P I   I H L + GT++DA   L+ +  +
Sbjct: 504 K-----SNGFPPYINPFITHIL-KSGTVDDALGLLNAMSSE 538


>gb|EMS63072.1| hypothetical protein TRIUR3_17311 [Triticum urartu]
          Length = 570

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/101 (33%), Positives = 56/101 (55%)
 Frame = -2

Query: 336 LQALVLHLCKKERGMDAYNLVRKAVVELKIQPSHPTYVELFRELIRSSMVKEVCEIFGLM 157
           L+ LV  LC+K+   +A+ +++  V+E  + P   TY  L  +LIR   +KE  ++ GLM
Sbjct: 419 LEVLVYGLCRKKEAKEAFKVLKDLVLEKDVVPWQSTYKYLIHKLIRQGHLKEAFDVLGLM 478

Query: 156 KEYNHASDGYYPIIMRQIIHFLARRGTLEDASSFLSKLKKD 34
           K     S+G+ P I   I H L + GT++DA   L+ +  +
Sbjct: 479 K-----SNGFPPYINPFITHIL-KSGTVDDALGLLNAMSSE 513


>gb|EOX92255.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 660

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
 Frame = -2

Query: 387 ALFSDMVAS-GCKPDCKVLQALVLHLCKKERGMDAYNLVRKAVVELKIQPSHPTYVELFR 211
           A F +MV   G        + LV   C ++R MDA  L+ K V E +++P H TY EL R
Sbjct: 487 AYFQNMVEKEGVSHAGYAFEWLVNSYCSRKRAMDACKLLHKYVSENQLRPWHTTYKELIR 546

Query: 210 ELIRSSMVKEVCEIFGLMKEYNHASDGYYPIIMRQIIHFLARRGTLEDASSFLSKL 43
           +L+     ++   + GLMK++       +P  +   I ++++ G+ EDA +FL  +
Sbjct: 547 KLLAQGGFRDGLSLLGLMKDHG------FPPFVDPFIDYVSKSGSSEDAIAFLKSM 596


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/113 (30%), Positives = 56/113 (49%)
 Frame = -2

Query: 381 FSDMVASGCKPDCKVLQALVLHLCKKERGMDAYNLVRKAVVELKIQPSHPTYVELFRELI 202
           F+ M+  GC PD  +L  L      ++R   AY LV +   + +I P   TY +L  +L+
Sbjct: 464 FAKMIEKGCDPDADLLDVLADGFLSQKRIEGAYELVAEISRKCRISPWQATYKKLIEKLL 523

Query: 201 RSSMVKEVCEIFGLMKEYNHASDGYYPIIMRQIIHFLARRGTLEDASSFLSKL 43
                +E  E+  LMK +N      YP      + ++++ G++EDA +FL  L
Sbjct: 524 GVMKFEEALELLRLMKSHN------YPPYHLPFVPYISKFGSVEDAEAFLKAL 570


>ref|XP_002451732.1| hypothetical protein SORBIDRAFT_04g006810 [Sorghum bicolor]
           gi|241931563|gb|EES04708.1| hypothetical protein
           SORBIDRAFT_04g006810 [Sorghum bicolor]
          Length = 608

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/106 (30%), Positives = 54/106 (50%)
 Frame = -2

Query: 336 LQALVLHLCKKERGMDAYNLVRKAVVELKIQPSHPTYVELFRELIRSSMVKEVCEIFGLM 157
           L+ALV  LCKK+   +A+ +++  V +  + P   TY  L   LIR   +K+  E+ GLM
Sbjct: 453 LEALVSGLCKKKGAKEAFKVLKNLVSKKIVVPWQTTYKYLIHNLIRQGHLKQAFEVLGLM 512

Query: 156 KEYNHASDGYYPIIMRQIIHFLARRGTLEDASSFLSKLKKDGISDK 19
           K +       YP  +   I  +++ GT++DA   L+     G+  +
Sbjct: 513 KSHG------YPSFIDPCITHISKSGTVDDALGLLNATSSKGLPSR 552


>ref|XP_004954664.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Setaria italica]
          Length = 555

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/106 (30%), Positives = 54/106 (50%)
 Frame = -2

Query: 336 LQALVLHLCKKERGMDAYNLVRKAVVELKIQPSHPTYVELFRELIRSSMVKEVCEIFGLM 157
           L+ALV  L KK+   +A+ +++  + E  + P   TY  L  +LIR   +K+  E+ GLM
Sbjct: 400 LEALVSGLYKKKGAKEAFQVLKNLIAEKAVVPWQTTYKYLIHKLIRQGHLKQAFEVLGLM 459

Query: 156 KEYNHASDGYYPIIMRQIIHFLARRGTLEDASSFLSKLKKDGISDK 19
           K +       YP  +   I  +++ GTL+DA   L+     G+  +
Sbjct: 460 KSHG------YPTFVDPFIPHISKSGTLDDALGLLNATSLRGLPSR 499


>gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus vulgaris]
          Length = 631

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/113 (29%), Positives = 56/113 (49%)
 Frame = -2

Query: 381 FSDMVASGCKPDCKVLQALVLHLCKKERGMDAYNLVRKAVVELKIQPSHPTYVELFRELI 202
           FS M+   C PD  +L  LV     ++R   AY +  +   + +I P   TY +L  +L+
Sbjct: 462 FSKMIEKDCNPDADLLDVLVDGFFSQKRIQGAYEVFIEISRKCRISPWQATYKKLIEKLL 521

Query: 201 RSSMVKEVCEIFGLMKEYNHASDGYYPIIMRQIIHFLARRGTLEDASSFLSKL 43
             +  +E  E+  LMK +N      YP      + ++++ G++EDA +FL  L
Sbjct: 522 EVTKFEEALELLRLMKTHN------YPPYHLPFVPYISKFGSVEDAEAFLKAL 568


>ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
           gi|241918963|gb|EER92107.1| hypothetical protein
           SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 40/123 (32%), Positives = 63/123 (51%)
 Frame = -2

Query: 381 FSDMVASGCKPDCKVLQALVLHLCKKERGMDAYNLVRKAVVELKIQPSHPTYVELFRELI 202
           FSDMV +GC PD   L +L+  L K  +G +A+ L  + + E+KI+P++ TY  L   L 
Sbjct: 516 FSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQ-LKEMKIEPTNGTYNTLLSGLG 574

Query: 201 RSSMVKEVCEIFGLMKEYNHASDGYYPIIMRQIIHFLARRGTLEDASSFLSKLKKDGISD 22
           R   VKEV     L++E  H+      I    ++  L++ G +  A   L  +     ++
Sbjct: 575 REGKVKEVMH---LLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSM-----TE 626

Query: 21  KGC 13
           KGC
Sbjct: 627 KGC 629


>ref|XP_002887500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297333341|gb|EFH63759.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 989

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/118 (29%), Positives = 60/118 (50%)
 Frame = -2

Query: 384 LFSDMVASGCKPDCKVLQALVLHLCKKERGMDAYNLVRKAVVELKIQPSHPTYVELFREL 205
           + ++M+ SGCKP CK   AL+    +     DA +L  +A+ +  ++P+   Y  L    
Sbjct: 569 ILAEMLDSGCKPGCKTYAALIASYVRLGLLSDAVDLY-EAMKKTGVKPNEVVYGSLINGF 627

Query: 204 IRSSMVKEVCEIFGLMKEYNHASDGYYPIIMRQIIHFLARRGTLEDASSFLSKLKKDG 31
             S MV+E  + F LM+E+   S+    I++  +I   ++ G LE+A     K+K  G
Sbjct: 628 AESGMVEEAIQYFKLMEEHGVQSN---HIVLTSLIKAYSKVGCLEEARRVYDKMKDSG 682


>gb|EMJ16204.1| hypothetical protein PRUPE_ppa002414mg [Prunus persica]
          Length = 675

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/97 (34%), Positives = 53/97 (54%)
 Frame = -2

Query: 333 QALVLHLCKKERGMDAYNLVRKAVVELKIQPSHPTYVELFRELIRSSMVKEVCEIFGLMK 154
           + LV   C+K R  DAY L+  +V E +++P H TY  L  +L+     K+   I GLMK
Sbjct: 509 ELLVNAYCRKNRATDAYKLLHDSVNERQLKPWHMTYKLLISKLLVQGGFKDALNILGLMK 568

Query: 153 EYNHASDGYYPIIMRQIIHFLARRGTLEDASSFLSKL 43
                +DG+ P +    I ++++ GT +DA +FL  +
Sbjct: 569 -----NDGFPPFV-DPFIEYVSKSGTGDDAIAFLKAM 599


>gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 41/123 (33%), Positives = 62/123 (50%)
 Frame = -2

Query: 381 FSDMVASGCKPDCKVLQALVLHLCKKERGMDAYNLVRKAVVELKIQPSHPTYVELFRELI 202
           FSDMV SGC PD   L +L+  L K  +G +A+ L  K + E+KI+P++ TY  L   L 
Sbjct: 509 FSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHK-LKEMKIEPTNGTYNTLLSGLG 567

Query: 201 RSSMVKEVCEIFGLMKEYNHASDGYYPIIMRQIIHFLARRGTLEDASSFLSKLKKDGISD 22
           R   VKEV +   L++E          I    ++  L++ G +  A   L  +     ++
Sbjct: 568 REGKVKEVMQ---LLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSM-----TE 619

Query: 21  KGC 13
           KGC
Sbjct: 620 KGC 622


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/113 (25%), Positives = 55/113 (48%)
 Frame = -2

Query: 381 FSDMVASGCKPDCKVLQALVLHLCKKERGMDAYNLVRKAVVELKIQPSHPTYVELFRELI 202
           F+ M+   C PD  +L  L+     +++   AY L+ +   +  ++P   TY +L + L+
Sbjct: 458 FAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLL 517

Query: 201 RSSMVKEVCEIFGLMKEYNHASDGYYPIIMRQIIHFLARRGTLEDASSFLSKL 43
               ++E   +  LMK+ N      YP      + ++++ GT++DA  FL  L
Sbjct: 518 EVRKLEEAIALLRLMKKQN------YPPFPEPFVQYISKFGTVQDADDFLKVL 564


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/110 (28%), Positives = 54/110 (49%)
 Frame = -2

Query: 372 MVASGCKPDCKVLQALVLHLCKKERGMDAYNLVRKAVVELKIQPSHPTYVELFRELIRSS 193
           M+   C PD  +L  L+     ++R   AY L    V + +++P   TY  L  +L+   
Sbjct: 466 MMEKHCDPDADLLAVLINAFLSQKRIDGAYTLFMDMVDKARLRPWQATYKLLIEKLLEVR 525

Query: 192 MVKEVCEIFGLMKEYNHASDGYYPIIMRQIIHFLARRGTLEDASSFLSKL 43
            ++E   +  LMK++NH      P      + +++R GT++DA+ FL  L
Sbjct: 526 KLEEALNLLRLMKQHNH------PPFPEPFVQYISRFGTVDDAADFLKAL 569