BLASTX nr result
ID: Ephedra28_contig00019625
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00019625
(860 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAJ95361.1| predicted protein [Hordeum vulgare subsp. vulgare] 102 2e-19
ref|XP_002517522.1| ring finger protein, putative [Ricinus commu... 102 2e-19
ref|XP_002971210.1| hypothetical protein SELMODRAFT_171829 [Sela... 100 5e-19
ref|XP_003568812.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 100 7e-19
ref|XP_002961593.1| hypothetical protein SELMODRAFT_76977 [Selag... 100 7e-19
ref|XP_004291419.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 99 2e-18
ref|XP_006654104.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 99 2e-18
ref|XP_001765272.1| predicted protein [Physcomitrella patens] gi... 99 2e-18
ref|XP_001765270.1| predicted protein [Physcomitrella patens] gi... 99 2e-18
ref|NP_001054802.1| Os05g0179000 [Oryza sativa Japonica Group] g... 99 2e-18
ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 99 3e-18
emb|CBI28122.3| unnamed protein product [Vitis vinifera] 99 3e-18
ref|XP_002516614.1| ring finger protein, putative [Ricinus commu... 98 4e-18
ref|XP_002324833.1| zinc finger family protein [Populus trichoca... 98 4e-18
ref|XP_004251592.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 97 6e-18
ref|XP_006465443.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 97 8e-18
ref|XP_006465441.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 97 8e-18
ref|XP_006465440.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 97 8e-18
ref|XP_006465439.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 97 8e-18
ref|XP_004498626.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 97 8e-18
>dbj|BAJ95361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 420
Score = 102 bits (254), Expect = 2e-19
Identities = 46/70 (65%), Positives = 53/70 (75%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDESGETQVQSS 680
+DAVCCICL RY + +DLRELPCTHFFH +CVDKWLKINA CPLCK EID SG T +
Sbjct: 343 EDAVCCICLARYSNNDDLRELPCTHFFHKECVDKWLKINALCPLCKAEID-SGPTTAPAI 401
Query: 679 GDAGQQSDRQ 650
G + SD +
Sbjct: 402 GFGRRHSDNR 411
>ref|XP_002517522.1| ring finger protein, putative [Ricinus communis]
gi|223543154|gb|EEF44686.1| ring finger protein,
putative [Ricinus communis]
Length = 421
Score = 102 bits (253), Expect = 2e-19
Identities = 43/66 (65%), Positives = 53/66 (80%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDESGETQVQSS 680
+DA+CCICL +Y D ++LRELPC+H FH+DCVDKWLKINASCPLCK E+ ES Q S+
Sbjct: 357 EDAICCICLNKYADNDELRELPCSHVFHVDCVDKWLKINASCPLCKSELGESSSAQ-PSA 415
Query: 679 GDAGQQ 662
D+ QQ
Sbjct: 416 RDSSQQ 421
>ref|XP_002971210.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
gi|300161192|gb|EFJ27808.1| hypothetical protein
SELMODRAFT_171829 [Selaginella moellendorffii]
Length = 392
Score = 100 bits (250), Expect = 5e-19
Identities = 45/68 (66%), Positives = 52/68 (76%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDESGETQVQSS 680
DDAVCCICL RY+DGE LREL CTH FH+DCVDKWLKINASCPLCK ++ G QS
Sbjct: 323 DDAVCCICLARYRDGEPLRELSCTHHFHVDCVDKWLKINASCPLCKLDV---GGANDQSG 379
Query: 679 GDAGQQSD 656
AG +++
Sbjct: 380 NAAGNEAN 387
>ref|XP_003568812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 419
Score = 100 bits (249), Expect = 7e-19
Identities = 45/70 (64%), Positives = 52/70 (74%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDESGETQVQSS 680
+DAVCCICL RY + +DLRELPCTHFFH +CVDKWLKINA CPLCK EID G T +
Sbjct: 342 EDAVCCICLARYVNNDDLRELPCTHFFHKECVDKWLKINALCPLCKAEID-GGSTSSSAL 400
Query: 679 GDAGQQSDRQ 650
G + SD +
Sbjct: 401 GFGRRHSDNR 410
>ref|XP_002961593.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
gi|300170252|gb|EFJ36853.1| hypothetical protein
SELMODRAFT_76977 [Selaginella moellendorffii]
Length = 403
Score = 100 bits (249), Expect = 7e-19
Identities = 45/67 (67%), Positives = 51/67 (76%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDESGETQVQSS 680
DDAVCCICL RY+DGE LREL CTH FH+DCVDKWLKINASCPLCK ++ G QS
Sbjct: 334 DDAVCCICLARYRDGEPLRELSCTHHFHVDCVDKWLKINASCPLCKLDV---GGANDQSG 390
Query: 679 GDAGQQS 659
AG ++
Sbjct: 391 NAAGNEA 397
>ref|XP_004291419.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Fragaria
vesca subsp. vesca]
Length = 430
Score = 99.4 bits (246), Expect = 2e-18
Identities = 42/68 (61%), Positives = 53/68 (77%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDESGETQVQSS 680
+DAVCCICL +Y + ++LRELPC+HFFH +CVDKWLKINASCPLCK E+ ES + S
Sbjct: 349 EDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKINASCPLCKSEVGESLLGSLSSL 408
Query: 679 GDAGQQSD 656
+ Q+SD
Sbjct: 409 NGSQQRSD 416
>ref|XP_006654104.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Oryza
brachyantha]
Length = 406
Score = 99.0 bits (245), Expect = 2e-18
Identities = 41/50 (82%), Positives = 43/50 (86%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEID 710
+DAVCCICL RY D +DLRELPC HFFH DCVDKWLKINA CPLCK EID
Sbjct: 329 EDAVCCICLARYADNDDLRELPCAHFFHKDCVDKWLKINALCPLCKAEID 378
>ref|XP_001765272.1| predicted protein [Physcomitrella patens]
gi|162683591|gb|EDQ70000.1| predicted protein
[Physcomitrella patens]
Length = 304
Score = 99.0 bits (245), Expect = 2e-18
Identities = 40/49 (81%), Positives = 46/49 (93%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEI 713
DDAVCCICLG+YKDG +LREL CTH FH++CVDKWLKINASCPLCK++I
Sbjct: 254 DDAVCCICLGKYKDGVELRELVCTHHFHVECVDKWLKINASCPLCKYDI 302
>ref|XP_001765270.1| predicted protein [Physcomitrella patens]
gi|162683589|gb|EDQ69998.1| predicted protein
[Physcomitrella patens]
Length = 300
Score = 99.0 bits (245), Expect = 2e-18
Identities = 40/49 (81%), Positives = 46/49 (93%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEI 713
DDAVCCICLG+YKDG +LREL CTH FH++CVDKWLKINASCPLCK++I
Sbjct: 250 DDAVCCICLGKYKDGVELRELVCTHHFHVECVDKWLKINASCPLCKYDI 298
>ref|NP_001054802.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|113578353|dbj|BAF16716.1| Os05g0179000 [Oryza sativa
Japonica Group] gi|215701280|dbj|BAG92704.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218196198|gb|EEC78625.1| hypothetical protein
OsI_18674 [Oryza sativa Indica Group]
gi|222630401|gb|EEE62533.1| hypothetical protein
OsJ_17331 [Oryza sativa Japonica Group]
Length = 407
Score = 99.0 bits (245), Expect = 2e-18
Identities = 45/70 (64%), Positives = 50/70 (71%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDESGETQVQSS 680
+DAVCCICL RY D +DLRELPC HFFH DCVDKWLKINA CPLCK EID T +
Sbjct: 330 EDAVCCICLARYVDNDDLRELPCAHFFHKDCVDKWLKINALCPLCKAEID-GVSTSAPAI 388
Query: 679 GDAGQQSDRQ 650
G + SD +
Sbjct: 389 GFGRRHSDNR 398
>ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 427
Score = 98.6 bits (244), Expect = 3e-18
Identities = 42/66 (63%), Positives = 52/66 (78%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDESGETQVQSS 680
+DAVCCICL RY D ++LRELPC+HFFH +CVDKWLKINASCPLCK E+ E+ + SS
Sbjct: 362 EDAVCCICLTRYADDDELRELPCSHFFHSECVDKWLKINASCPLCKCEVGENTGSLPSSS 421
Query: 679 GDAGQQ 662
+ Q+
Sbjct: 422 NSSQQR 427
>emb|CBI28122.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 98.6 bits (244), Expect = 3e-18
Identities = 42/66 (63%), Positives = 52/66 (78%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDESGETQVQSS 680
+DAVCCICL RY D ++LRELPC+HFFH +CVDKWLKINASCPLCK E+ E+ + SS
Sbjct: 342 EDAVCCICLTRYADDDELRELPCSHFFHSECVDKWLKINASCPLCKCEVGENTGSLPSSS 401
Query: 679 GDAGQQ 662
+ Q+
Sbjct: 402 NSSQQR 407
>ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
gi|223544434|gb|EEF45955.1| ring finger protein,
putative [Ricinus communis]
Length = 437
Score = 97.8 bits (242), Expect = 4e-18
Identities = 43/69 (62%), Positives = 52/69 (75%), Gaps = 10/69 (14%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDES-------- 704
+DAVCCICL +Y + ++LRELPC+HFFH DCVDKWLKINASCPLCK E+ ES
Sbjct: 358 EDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKTEVGESVMGSLTAT 417
Query: 703 --GETQVQS 683
G+ QV+S
Sbjct: 418 NTGQRQVES 426
>ref|XP_002324833.1| zinc finger family protein [Populus trichocarpa]
gi|222866267|gb|EEF03398.1| zinc finger family protein
[Populus trichocarpa]
Length = 434
Score = 97.8 bits (242), Expect = 4e-18
Identities = 39/52 (75%), Positives = 46/52 (88%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDES 704
+DAVCCICL +Y + ++LRELPC+HFFH DCVDKWLKINASCPLCK E+ ES
Sbjct: 355 EDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEVGES 406
>ref|XP_004251592.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Solanum lycopersicum] gi|460412408|ref|XP_004251593.1|
PREDICTED: E3 ubiquitin-protein ligase At4g11680-like
isoform 2 [Solanum lycopersicum]
Length = 419
Score = 97.4 bits (241), Expect = 6e-18
Identities = 41/67 (61%), Positives = 49/67 (73%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDESGETQVQSS 680
+DAVCCICL +Y+D ++LRELPC+HFFH CVDKWLKINA+CPLCK EID
Sbjct: 353 EDAVCCICLAKYEDNDELRELPCSHFFHTQCVDKWLKINATCPLCKSEIDAKNRDLPSVE 412
Query: 679 GDAGQQS 659
+ QQS
Sbjct: 413 EEPLQQS 419
>ref|XP_006465443.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X5
[Citrus sinensis]
Length = 369
Score = 97.1 bits (240), Expect = 8e-18
Identities = 41/60 (68%), Positives = 48/60 (80%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDESGETQVQSS 680
+DAVCCICL +Y D ++LREL C+H FH+DCVDKWLKINASCPLCK EI +S VQ S
Sbjct: 307 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEISDSSSPLVQDS 366
>ref|XP_006465441.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X3
[Citrus sinensis] gi|568822028|ref|XP_006465442.1|
PREDICTED: E3 ubiquitin-protein ligase At1g12760-like
isoform X4 [Citrus sinensis]
Length = 423
Score = 97.1 bits (240), Expect = 8e-18
Identities = 41/60 (68%), Positives = 48/60 (80%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDESGETQVQSS 680
+DAVCCICL +Y D ++LREL C+H FH+DCVDKWLKINASCPLCK EI +S VQ S
Sbjct: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEISDSSSPLVQDS 420
>ref|XP_006465440.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X2
[Citrus sinensis]
Length = 425
Score = 97.1 bits (240), Expect = 8e-18
Identities = 41/60 (68%), Positives = 48/60 (80%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDESGETQVQSS 680
+DAVCCICL +Y D ++LREL C+H FH+DCVDKWLKINASCPLCK EI +S VQ S
Sbjct: 363 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEISDSSSPLVQDS 422
>ref|XP_006465439.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X1
[Citrus sinensis]
Length = 437
Score = 97.1 bits (240), Expect = 8e-18
Identities = 41/60 (68%), Positives = 48/60 (80%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDESGETQVQSS 680
+DAVCCICL +Y D ++LREL C+H FH+DCVDKWLKINASCPLCK EI +S VQ S
Sbjct: 375 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEISDSSSPLVQDS 434
>ref|XP_004498626.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X1
[Cicer arietinum] gi|502124683|ref|XP_004498627.1|
PREDICTED: E3 ubiquitin-protein ligase At1g12760-like
isoform X2 [Cicer arietinum]
gi|502124686|ref|XP_004498628.1| PREDICTED: E3
ubiquitin-protein ligase At1g12760-like isoform X3
[Cicer arietinum] gi|502124688|ref|XP_004498629.1|
PREDICTED: E3 ubiquitin-protein ligase At1g12760-like
isoform X4 [Cicer arietinum]
gi|502124691|ref|XP_004498630.1| PREDICTED: E3
ubiquitin-protein ligase At1g12760-like isoform X5
[Cicer arietinum] gi|502124693|ref|XP_004498631.1|
PREDICTED: E3 ubiquitin-protein ligase At1g12760-like
isoform X6 [Cicer arietinum]
Length = 403
Score = 97.1 bits (240), Expect = 8e-18
Identities = 43/68 (63%), Positives = 52/68 (76%)
Frame = -2
Query: 859 DDAVCCICLGRYKDGEDLRELPCTHFFHLDCVDKWLKINASCPLCKHEIDESGETQVQSS 680
+DAVCCICL +Y++ ++LRELPC+H FH DCVDKWLKINA CPLCK E+ E T + S
Sbjct: 326 EDAVCCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCKSEVGED-LTGLGSG 384
Query: 679 GDAGQQSD 656
DA QQ D
Sbjct: 385 EDATQQRD 392