BLASTX nr result

ID: Ephedra28_contig00019585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00019585
         (454 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006841839.1| hypothetical protein AMTR_s00003p00270500 [A...    42   5e-06
ref|XP_002306376.1| hypothetical protein POPTR_0005s09290g [Popu...    44   6e-06

>ref|XP_006841839.1| hypothetical protein AMTR_s00003p00270500 [Amborella trichopoda]
           gi|548843860|gb|ERN03514.1| hypothetical protein
           AMTR_s00003p00270500 [Amborella trichopoda]
          Length = 427

 Score = 41.6 bits (96), Expect(2) = 5e-06
 Identities = 17/34 (50%), Positives = 25/34 (73%)
 Frame = -3

Query: 269 FIEGGIQEAVSQIIKGILLAIRLGMMDVGEISKG 168
           F+EGGIQ  +SQ++ GILL ++ G+   G +SKG
Sbjct: 261 FLEGGIQMFISQVLIGILLGVKFGLSGTGHLSKG 294



 Score = 34.3 bits (77), Expect(2) = 5e-06
 Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 13/44 (29%)
 Frame = -1

Query: 367 GINVIMFCVLVLFKMMAFGNNASF-------------TLMSIFT 275
           GINVIMF   VLFK + FG+NAS              T +SIFT
Sbjct: 208 GINVIMFYAPVLFKTIGFGSNASLMSAVITGVVNVVATFVSIFT 251


>ref|XP_002306376.1| hypothetical protein POPTR_0005s09290g [Populus trichocarpa]
           gi|222855825|gb|EEE93372.1| hypothetical protein
           POPTR_0005s09290g [Populus trichocarpa]
          Length = 512

 Score = 44.3 bits (103), Expect(2) = 6e-06
 Identities = 19/34 (55%), Positives = 26/34 (76%)
 Frame = -3

Query: 269 FIEGGIQEAVSQIIKGILLAIRLGMMDVGEISKG 168
           F+EGG+Q  +SQI+ GI++AI  G   VGE+SKG
Sbjct: 352 FLEGGVQMIISQILVGIMIAINFGTRGVGELSKG 385



 Score = 31.2 bits (69), Expect(2) = 6e-06
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -1

Query: 367 GINVIMFCVLVLFKMMAFGNNAS 299
           GINVIMF   VLFK + FG++A+
Sbjct: 299 GINVIMFYAPVLFKTLGFGDDAA 321


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