BLASTX nr result
ID: Ephedra28_contig00019430
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00019430
(1013 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004238773.1| PREDICTED: single-stranded DNA-bindig protei... 187 4e-45
ref|NP_001275155.1| single-stranded DNA-binding protein WHY1, ch... 187 4e-45
pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regul... 187 4e-45
ref|XP_006303274.1| hypothetical protein CARUB_v10010024mg [Caps... 184 4e-44
ref|XP_006656631.1| PREDICTED: single-stranded DNA-binding prote... 183 8e-44
ref|XP_002520128.1| conserved hypothetical protein [Ricinus comm... 183 8e-44
ref|XP_006395762.1| hypothetical protein EUTSA_v10004763mg [Eutr... 183 1e-43
dbj|BAD68418.1| putative DNA-binding protein p24 [Oryza sativa J... 182 1e-43
ref|XP_003557198.1| PREDICTED: uncharacterized protein LOC100824... 182 1e-43
gb|EEC79990.1| hypothetical protein OsI_21637 [Oryza sativa Indi... 182 1e-43
gb|ABL85062.1| expressed protein [Brachypodium sylvaticum] 182 1e-43
ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253... 182 2e-43
gb|EPS66445.1| hypothetical protein M569_08332, partial [Genlise... 181 3e-43
dbj|BAJ85014.1| predicted protein [Hordeum vulgare subsp. vulgar... 181 3e-43
ref|XP_002892804.1| ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyra... 180 7e-43
ref|XP_002311601.1| hypothetical protein POPTR_0008s14840g [Popu... 180 7e-43
ref|NP_001077872.1| single-stranded DNA-binding protein WHY3 [Ar... 180 7e-43
ref|XP_002875143.1| ATWHY3/PTAC11 [Arabidopsis lyrata subsp. lyr... 180 9e-43
pdb|4KOQ|A Chain A, Crystal Structure Of Why3 From Arabidopsis T... 179 1e-42
ref|XP_006842726.1| hypothetical protein AMTR_s00133p00020030 [A... 179 1e-42
>ref|XP_004238773.1| PREDICTED: single-stranded DNA-bindig protein WHY1,
chloroplastic-like [Solanum lycopersicum]
Length = 268
Score = 187 bits (476), Expect = 4e-45
Identities = 83/165 (50%), Positives = 124/165 (75%)
Frame = -2
Query: 829 KVFAPYAIYKGKTAMRIKLIQPQFTKFNSGYLRRTKEGIILLEFAPAKGVRQYDWDRKQL 650
KVF Y+IYKGK A+ ++ P+F+ +SG + +KEG+++L+FAPA GVRQYDW RKQ+
Sbjct: 85 KVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSKEGMVMLQFAPAAGVRQYDWSRKQV 144
Query: 649 FALSVSEVGQLLAMGPQDSCEFFHDPNMQKSDAGKVIKVLKVASIPGKASYSFVLNVSDK 470
F+LSV+E+G ++++G +DSCEFFHDPN +SD G+V KVLKV +P + + F L+V +K
Sbjct: 145 FSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNK 204
Query: 469 KLNVEEKLYMPVEKGELAVMKSSFNSILPYLIGWNFVMNSAHTTD 335
+N++E +Y+PV K E AV+ S+FN ++PYL+GW+ +NS D
Sbjct: 205 LINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNSFKPED 249
>ref|NP_001275155.1| single-stranded DNA-binding protein WHY1, chloroplastic [Solanum
tuberosum] gi|75174555|sp|Q9LL85.1|WHY1_SOLTU RecName:
Full=Single-stranded DNA-binding protein WHY1,
chloroplastic; AltName: Full=DNA-binding protein p24;
AltName: Full=PR-10a binding factor 2; Short=PBF-2;
AltName: Full=Protein WHIRLY 1; Short=StWhy1; Flags:
Precursor gi|9651810|gb|AAF91282.1|AF233342_1
DNA-binding protein p24 [Solanum tuberosum]
Length = 274
Score = 187 bits (476), Expect = 4e-45
Identities = 85/172 (49%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Frame = -2
Query: 847 PRGQSG-KVFAPYAIYKGKTAMRIKLIQPQFTKFNSGYLRRTKEGIILLEFAPAKGVRQY 671
P+G S KVF Y+IYKGK A+ ++ P+F+ +SG + ++EG+++L+FAPA GVRQY
Sbjct: 84 PQGASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMVMLQFAPAAGVRQY 143
Query: 670 DWDRKQLFALSVSEVGQLLAMGPQDSCEFFHDPNMQKSDAGKVIKVLKVASIPGKASYSF 491
DW RKQ+F+LSV+E+G ++++G +DSCEFFHDPN +SD G+V KVLKV +P + + F
Sbjct: 144 DWSRKQVFSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRVRKVLKVEPLPDGSGHFF 203
Query: 490 VLNVSDKKLNVEEKLYMPVEKGELAVMKSSFNSILPYLIGWNFVMNSAHTTD 335
L+V +K +N++E +Y+PV K E AV+ S+FN ++PYL+GW+ +NS D
Sbjct: 204 NLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNSFKPED 255
>pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regulator Pbf-2
gi|157878743|pdb|1L3A|B Chain B, Structure Of The Plant
Transcriptional Regulator Pbf-2 gi|157878744|pdb|1L3A|C
Chain C, Structure Of The Plant Transcriptional
Regulator Pbf-2 gi|157878745|pdb|1L3A|D Chain D,
Structure Of The Plant Transcriptional Regulator Pbf-2
Length = 227
Score = 187 bits (476), Expect = 4e-45
Identities = 85/172 (49%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Frame = -2
Query: 847 PRGQSG-KVFAPYAIYKGKTAMRIKLIQPQFTKFNSGYLRRTKEGIILLEFAPAKGVRQY 671
P+G S KVF Y+IYKGK A+ ++ P+F+ +SG + ++EG+++L+FAPA GVRQY
Sbjct: 30 PQGASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMVMLQFAPAAGVRQY 89
Query: 670 DWDRKQLFALSVSEVGQLLAMGPQDSCEFFHDPNMQKSDAGKVIKVLKVASIPGKASYSF 491
DW RKQ+F+LSV+E+G ++++G +DSCEFFHDPN +SD G+V KVLKV +P + + F
Sbjct: 90 DWSRKQVFSLSVTEIGSIISLGTKDSCEFFHDPNKGRSDEGRVRKVLKVEPLPDGSGHFF 149
Query: 490 VLNVSDKKLNVEEKLYMPVEKGELAVMKSSFNSILPYLIGWNFVMNSAHTTD 335
L+V +K +N++E +Y+PV K E AV+ S+FN ++PYL+GW+ +NS D
Sbjct: 150 NLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNSFKPED 201
>ref|XP_006303274.1| hypothetical protein CARUB_v10010024mg [Capsella rubella]
gi|482571985|gb|EOA36172.1| hypothetical protein
CARUB_v10010024mg [Capsella rubella]
Length = 266
Score = 184 bits (468), Expect = 4e-44
Identities = 85/194 (43%), Positives = 130/194 (67%)
Frame = -2
Query: 916 KTSLYRSRPFSISSDEGAVDDEVPRGQSGKVFAPYAIYKGKTAMRIKLIQPQFTKFNSGY 737
+T + + F SS + + G + + ++IYKGK A+ ++ P+F +SG
Sbjct: 54 QTDYFEKQRFGDSSSSPSYSSQNAEGSPARFYVGHSIYKGKAALTVEPRAPEFVALDSGA 113
Query: 736 LRRTKEGIILLEFAPAKGVRQYDWDRKQLFALSVSEVGQLLAMGPQDSCEFFHDPNMQKS 557
+ +K+G +LL+FAP+ GVRQYDW +KQ+F+LSV+E+G L+++GP++SCEFFHDP KS
Sbjct: 114 FKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPKESCEFFHDPFKGKS 173
Query: 556 DAGKVIKVLKVASIPGKASYSFVLNVSDKKLNVEEKLYMPVEKGELAVMKSSFNSILPYL 377
D GKV KVLKV +P + + F L+V +K LNV++ +Y+P+ + E AV+ S+FN +LPYL
Sbjct: 174 DEGKVRKVLKVEPLPDGSGHFFNLSVQNKLLNVDDNIYIPITRAEFAVLISAFNFVLPYL 233
Query: 376 IGWNFVMNSAHTTD 335
IGW+ NS D
Sbjct: 234 IGWHAFANSIKPED 247
>ref|XP_006656631.1| PREDICTED: single-stranded DNA-binding protein WHY1,
chloroplastic-like, partial [Oryza brachyantha]
Length = 201
Score = 183 bits (465), Expect = 8e-44
Identities = 89/171 (52%), Positives = 118/171 (69%)
Frame = -2
Query: 847 PRGQSGKVFAPYAIYKGKTAMRIKLIQPQFTKFNSGYLRRTKEGIILLEFAPAKGVRQYD 668
P Q+G+VF+ Y+IYKGK A+ + PQF +SG + KEG +LL+FAPA RQYD
Sbjct: 14 PGTQNGRVFSTYSIYKGKAALSLDPSPPQFAPLDSGAYKVVKEGFVLLQFAPAVATRQYD 73
Query: 667 WDRKQLFALSVSEVGQLLAMGPQDSCEFFHDPNMQKSDAGKVIKVLKVASIPGKASYSFV 488
W RKQ+F+LSV E+G LL +GP DSCEFFHDP +SD GKV KVLKV P S F
Sbjct: 74 WTRKQVFSLSVWEMGSLLTLGPTDSCEFFHDPFKGRSDEGKVRKVLKVEPTPDGNSRFFN 133
Query: 487 LNVSDKKLNVEEKLYMPVEKGELAVMKSSFNSILPYLIGWNFVMNSAHTTD 335
L+V ++ LN++E +Y+P+ KGE AV+ S+FN I+P+L+GW+ NS D
Sbjct: 134 LSVQNRLLNIDENIYIPISKGEFAVIVSTFNYIIPHLMGWSTFTNSIKPED 184
>ref|XP_002520128.1| conserved hypothetical protein [Ricinus communis]
gi|223540620|gb|EEF42183.1| conserved hypothetical
protein [Ricinus communis]
Length = 271
Score = 183 bits (465), Expect = 8e-44
Identities = 95/207 (45%), Positives = 132/207 (63%)
Frame = -2
Query: 970 RVCHFLKNQQQLLRQMHPKTSLYRSRPFSISSDEGAVDDEVPRGQSGKVFAPYAIYKGKT 791
R F QQQ P S S +S A VPR V+ ++IYKGK
Sbjct: 54 RQSEFYDQQQQKYNPSRPS-----SNDSSFASQSPAA---VPR-----VYVGHSIYKGKA 100
Query: 790 AMRIKLIQPQFTKFNSGYLRRTKEGIILLEFAPAKGVRQYDWDRKQLFALSVSEVGQLLA 611
A+ ++ P+F +SG + +EG +LL+FAPA GVRQYDW RKQ+F+LSV+E+G +++
Sbjct: 101 ALTVEPRAPEFAALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIIS 160
Query: 610 MGPQDSCEFFHDPNMQKSDAGKVIKVLKVASIPGKASYSFVLNVSDKKLNVEEKLYMPVE 431
+G +DSCEFFHDPN KSD GK+ KVLKV +P + + F L+V +K +N++E +Y+PV
Sbjct: 161 LGARDSCEFFHDPNKGKSDEGKIRKVLKVEPLPDGSGHFFNLSVQNKPMNMDESIYIPVT 220
Query: 430 KGELAVMKSSFNSILPYLIGWNFVMNS 350
K E AV+ S+FN ILPYL+GW+ NS
Sbjct: 221 KAEFAVLISAFNYILPYLLGWHTFANS 247
>ref|XP_006395762.1| hypothetical protein EUTSA_v10004763mg [Eutrema salsugineum]
gi|557092401|gb|ESQ33048.1| hypothetical protein
EUTSA_v10004763mg [Eutrema salsugineum]
Length = 273
Score = 183 bits (464), Expect = 1e-43
Identities = 92/191 (48%), Positives = 125/191 (65%), Gaps = 1/191 (0%)
Frame = -2
Query: 904 YRSRPFSISSDEGAVDDEVPRGQSGKVFAPYAIYKGKTAMRIKLIQPQFTKFNSGYLRRT 725
+ + F SS + G S + + ++IYKGK A+ I+ P+F SG + +
Sbjct: 64 FEKQRFGDSSSSPPYSPQNAEGSSPRYYVGHSIYKGKAALTIEPRAPEFVALESGAFKLS 123
Query: 724 KEGIILLEFAPAKGVRQYDWDRKQLFALSVSEVGQLLAMGPQDSCEFFHDPNMQK-SDAG 548
KEG +LL+FAPA GVRQYDW RKQ+F+LSV E+G L+++GP++SCEFFHDPN K SD G
Sbjct: 124 KEGFLLLQFAPAAGVRQYDWSRKQVFSLSVPEIGNLVSLGPRESCEFFHDPNKGKGSDEG 183
Query: 547 KVIKVLKVASIPGKASYSFVLNVSDKKLNVEEKLYMPVEKGELAVMKSSFNSILPYLIGW 368
KV KVLKV +P + F L+V +K LNV+E +Y+P+ K E AV+ S+FN ILP+LIGW
Sbjct: 184 KVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFILPHLIGW 243
Query: 367 NFVMNSAHTTD 335
NS D
Sbjct: 244 QAFANSIKPED 254
>dbj|BAD68418.1| putative DNA-binding protein p24 [Oryza sativa Japonica Group]
gi|55297130|dbj|BAD68773.1| putative DNA-binding protein
p24 [Oryza sativa Japonica Group]
gi|222634946|gb|EEE65078.1| hypothetical protein
OsJ_20114 [Oryza sativa Japonica Group]
Length = 272
Score = 182 bits (463), Expect = 1e-43
Identities = 89/168 (52%), Positives = 117/168 (69%)
Frame = -2
Query: 838 QSGKVFAPYAIYKGKTAMRIKLIQPQFTKFNSGYLRRTKEGIILLEFAPAKGVRQYDWDR 659
Q+G+VF+ Y+IYKGK AM + PQF +SG + KEG +LL+FAPA RQYDW R
Sbjct: 88 QNGRVFSTYSIYKGKAAMSLDPRPPQFVPLDSGAYKVVKEGFVLLQFAPAVATRQYDWTR 147
Query: 658 KQLFALSVSEVGQLLAMGPQDSCEFFHDPNMQKSDAGKVIKVLKVASIPGKASYSFVLNV 479
KQ+F+LSV E+G LL +GP DSCEFFHDP +SD GKV KVLKV P S F L+V
Sbjct: 148 KQVFSLSVWEMGSLLTLGPTDSCEFFHDPFKGRSDEGKVRKVLKVEPTPDGNSRFFNLSV 207
Query: 478 SDKKLNVEEKLYMPVEKGELAVMKSSFNSILPYLIGWNFVMNSAHTTD 335
++ LN++E +Y+P+ KGE AV+ S+FN I+P+L+GW+ NS D
Sbjct: 208 QNRLLNIDENIYIPITKGEFAVIVSTFNYIIPHLMGWSTFTNSIKPED 255
>ref|XP_003557198.1| PREDICTED: uncharacterized protein LOC100824321 [Brachypodium
distachyon]
Length = 274
Score = 182 bits (463), Expect = 1e-43
Identities = 93/184 (50%), Positives = 121/184 (65%), Gaps = 2/184 (1%)
Frame = -2
Query: 841 GQSGKVFAPYAIYKGKTAMRIKLIQPQFTKFNSGYLRRTKEGIILLEFAPAKGVRQYDWD 662
GQSG+V+A Y+IYKGK A+ PQF +SG + KEG +LL+FAPA RQYDW
Sbjct: 89 GQSGRVYASYSIYKGKAALSFDPRPPQFVPLDSGAYKVAKEGFVLLQFAPAVAARQYDWT 148
Query: 661 RKQLFALSVSEVGQLLAMGPQDSCEFFHDPNMQKSDAGKVIKVLKVASIPGKASYSFVLN 482
RKQ+F+LSV E+G LL +GP DSCEFFHDP +SD GKV KVLKV P F L+
Sbjct: 149 RKQVFSLSVWEMGTLLTLGPTDSCEFFHDPFKGRSDEGKVRKVLKVEPTPDGNGRFFNLS 208
Query: 481 VSDKKLNVEEKLYMPVEKGELAVMKSSFNSILPYLIGWNFVMNSAHTTD--PISSVSKS* 308
V ++ LN++E +Y+P+ KGE AV+ S+FN I+P+++GW+ NS D P S S
Sbjct: 209 VQNRLLNIDESVYIPITKGEYAVIVSTFNYIIPHIMGWSTFTNSIKLEDSQPYSRPQSSP 268
Query: 307 FSEW 296
EW
Sbjct: 269 ELEW 272
>gb|EEC79990.1| hypothetical protein OsI_21637 [Oryza sativa Indica Group]
Length = 274
Score = 182 bits (463), Expect = 1e-43
Identities = 89/168 (52%), Positives = 117/168 (69%)
Frame = -2
Query: 838 QSGKVFAPYAIYKGKTAMRIKLIQPQFTKFNSGYLRRTKEGIILLEFAPAKGVRQYDWDR 659
Q+G+VF+ Y+IYKGK AM + PQF +SG + KEG +LL+FAPA RQYDW R
Sbjct: 90 QNGRVFSTYSIYKGKAAMSLDPRPPQFVPLDSGAYKVVKEGFVLLQFAPAVATRQYDWTR 149
Query: 658 KQLFALSVSEVGQLLAMGPQDSCEFFHDPNMQKSDAGKVIKVLKVASIPGKASYSFVLNV 479
KQ+F+LSV E+G LL +GP DSCEFFHDP +SD GKV KVLKV P S F L+V
Sbjct: 150 KQVFSLSVWEMGSLLTLGPTDSCEFFHDPFKGRSDEGKVRKVLKVEPTPDGNSRFFNLSV 209
Query: 478 SDKKLNVEEKLYMPVEKGELAVMKSSFNSILPYLIGWNFVMNSAHTTD 335
++ LN++E +Y+P+ KGE AV+ S+FN I+P+L+GW+ NS D
Sbjct: 210 QNRLLNIDENIYIPITKGEFAVIVSTFNYIIPHLMGWSTFTNSIKPED 257
>gb|ABL85062.1| expressed protein [Brachypodium sylvaticum]
Length = 266
Score = 182 bits (463), Expect = 1e-43
Identities = 93/184 (50%), Positives = 121/184 (65%), Gaps = 2/184 (1%)
Frame = -2
Query: 841 GQSGKVFAPYAIYKGKTAMRIKLIQPQFTKFNSGYLRRTKEGIILLEFAPAKGVRQYDWD 662
GQSG+VFA Y+IYKGK A+ PQF +SG + KEG +LL+FAPA RQYDW
Sbjct: 81 GQSGRVFASYSIYKGKAALSFDPRPPQFVPLDSGAYKVAKEGFVLLQFAPAVAARQYDWT 140
Query: 661 RKQLFALSVSEVGQLLAMGPQDSCEFFHDPNMQKSDAGKVIKVLKVASIPGKASYSFVLN 482
RKQ+F+LSV E+G LL +GP DSCEFFHDP +SD GKV KVLKV P F L+
Sbjct: 141 RKQVFSLSVWEMGTLLTLGPTDSCEFFHDPFKGRSDEGKVRKVLKVEPTPDGNGRFFNLS 200
Query: 481 VSDKKLNVEEKLYMPVEKGELAVMKSSFNSILPYLIGWNFVMNS--AHTTDPISSVSKS* 308
V ++ LN++E +Y+P+ KGE AV+ S+FN I+P+++GW+ NS + P S S
Sbjct: 201 VQNRLLNIDESVYIPITKGEYAVIVSTFNYIIPHIMGWSTFTNSIKLEESQPYSRPQSSP 260
Query: 307 FSEW 296
EW
Sbjct: 261 ELEW 264
>ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253653 [Vitis vinifera]
gi|296086421|emb|CBI32010.3| unnamed protein product
[Vitis vinifera]
Length = 268
Score = 182 bits (462), Expect = 2e-43
Identities = 94/211 (44%), Positives = 139/211 (65%), Gaps = 2/211 (0%)
Frame = -2
Query: 961 HFLKNQQQLLRQMH--PKTSLYRSRPFSISSDEGAVDDEVPRGQSGKVFAPYAIYKGKTA 788
HF K + RQ + ++ R +P + SS GA+ +VF ++IYKGK A
Sbjct: 48 HFRKKRSLQCRQSDYFQQQNITRRQPPNDSSFGGALQP--------RVFVGHSIYKGKAA 99
Query: 787 MRIKLIQPQFTKFNSGYLRRTKEGIILLEFAPAKGVRQYDWDRKQLFALSVSEVGQLLAM 608
+ ++ P+FT +SG + +KEG +LL+FAPA GVRQYDW RKQ+F+LSV+E+G L+++
Sbjct: 100 LTVEPKAPEFTPLDSGAFKVSKEGFVLLQFAPAAGVRQYDWGRKQVFSLSVTEIGSLISL 159
Query: 607 GPQDSCEFFHDPNMQKSDAGKVIKVLKVASIPGKASYSFVLNVSDKKLNVEEKLYMPVEK 428
G ++SCEFFHDP +S+ GKV KVLKV +P + + F L+V +K LN++E +Y+PV +
Sbjct: 160 GARESCEFFHDPFKGRSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLLNMDENIYIPVTR 219
Query: 427 GELAVMKSSFNSILPYLIGWNFVMNSAHTTD 335
E AV+ S+FN I+PYL+GW+ NS D
Sbjct: 220 AEFAVLISAFNFIVPYLLGWHAYANSIKPDD 250
>gb|EPS66445.1| hypothetical protein M569_08332, partial [Genlisea aurea]
Length = 187
Score = 181 bits (460), Expect = 3e-43
Identities = 84/173 (48%), Positives = 123/173 (71%)
Frame = -2
Query: 829 KVFAPYAIYKGKTAMRIKLIQPQFTKFNSGYLRRTKEGIILLEFAPAKGVRQYDWDRKQL 650
+V+A Y++YKGK A+ ++ P+F+ SG + +KEG +LL+FAPA G RQYDW RKQ+
Sbjct: 6 RVYAGYSVYKGKAAITVEPRPPEFSSLGSGAFKVSKEGFVLLQFAPAVGSRQYDWTRKQI 65
Query: 649 FALSVSEVGQLLAMGPQDSCEFFHDPNMQKSDAGKVIKVLKVASIPGKASYSFVLNVSDK 470
F+LSV+E+G ++++G +DSCEFFHDPN KSD G+V KVLKV +P + + F L+V +K
Sbjct: 66 FSLSVTEIGNIISLGARDSCEFFHDPNKGKSDEGRVRKVLKVEPLPDGSGHFFNLSVQNK 125
Query: 469 KLNVEEKLYMPVEKGELAVMKSSFNSILPYLIGWNFVMNSAHTTDPISSVSKS 311
NV+E +Y+P+ + E AV+ SS N I+PYL+GW+ +S D S+ S S
Sbjct: 126 ITNVDESIYIPITRAEFAVLVSSLNFIVPYLLGWHAFASSVKPEDSSSTRSNS 178
>dbj|BAJ85014.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519312|dbj|BAJ96655.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 267
Score = 181 bits (460), Expect = 3e-43
Identities = 94/187 (50%), Positives = 122/187 (65%), Gaps = 2/187 (1%)
Frame = -2
Query: 850 VPRGQSGKVFAPYAIYKGKTAMRIKLIQPQFTKFNSGYLRRTKEGIILLEFAPAKGVRQY 671
VP GQ+G+VFA Y+IYKGK A+ PQF SG + KEG +LL+FAPA G RQY
Sbjct: 79 VPGGQAGRVFASYSIYKGKAALAFDPRPPQFVPLESGAYKVAKEGFVLLQFAPAVGPRQY 138
Query: 670 DWDRKQLFALSVSEVGQLLAMGPQDSCEFFHDPNMQKSDAGKVIKVLKVASIPGKASYSF 491
DW RKQ+F+LSV E+G LL +G DSCEFFHDP +SD GKV KVLKV P F
Sbjct: 139 DWARKQVFSLSVWEMGTLLTLGLTDSCEFFHDPFKGRSDEGKVRKVLKVEPTPDGNGRFF 198
Query: 490 VLNVSDKKLNVEEKLYMPVEKGELAVMKSSFNSILPYLIGWNFVMNS--AHTTDPISSVS 317
L+V ++ LNV+E +Y+P+ KGE AV+ S+FN I+P+++GW+ NS + P +
Sbjct: 199 NLSVQNRLLNVDENIYIPITKGEYAVIVSTFNYIIPHIMGWSTFTNSIKPEESQPYNRPQ 258
Query: 316 KS*FSEW 296
S EW
Sbjct: 259 SSPELEW 265
>ref|XP_002892804.1| ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyrata]
gi|297338646|gb|EFH69063.1| ATWHY1/PTAC1 [Arabidopsis
lyrata subsp. lyrata]
Length = 264
Score = 180 bits (457), Expect = 7e-43
Identities = 86/194 (44%), Positives = 131/194 (67%)
Frame = -2
Query: 916 KTSLYRSRPFSISSDEGAVDDEVPRGQSGKVFAPYAIYKGKTAMRIKLIQPQFTKFNSGY 737
+T + + F SS + + E G + + ++IYKGK A+ ++ P+F +SG
Sbjct: 55 QTDYFEKQRFGDSSSSSSQNAE---GLPARFYVGHSIYKGKAALTMEPRAPEFVALDSGA 111
Query: 736 LRRTKEGIILLEFAPAKGVRQYDWDRKQLFALSVSEVGQLLAMGPQDSCEFFHDPNMQKS 557
+ +K+G +LL+FAP+ GVRQYDW +KQ+F+LSV+E+G L+++GP++SCEFFHDP KS
Sbjct: 112 FKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRESCEFFHDPFKGKS 171
Query: 556 DAGKVIKVLKVASIPGKASYSFVLNVSDKKLNVEEKLYMPVEKGELAVMKSSFNSILPYL 377
D GKV KVLKV +P + + F L+V +K +NV+E +Y+P+ + E AV+ S+FN +LPYL
Sbjct: 172 DEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFVLPYL 231
Query: 376 IGWNFVMNSAHTTD 335
IGW+ NS D
Sbjct: 232 IGWHAFANSIKPED 245
>ref|XP_002311601.1| hypothetical protein POPTR_0008s14840g [Populus trichocarpa]
gi|118485247|gb|ABK94483.1| unknown [Populus
trichocarpa] gi|222851421|gb|EEE88968.1| hypothetical
protein POPTR_0008s14840g [Populus trichocarpa]
Length = 265
Score = 180 bits (457), Expect = 7e-43
Identities = 88/183 (48%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
Frame = -2
Query: 880 SSDEGAVDDEVPRGQSG-KVFAPYAIYKGKTAMRIKLIQPQFTKFNSGYLRRTKEGIILL 704
+S + P G+S KVF ++IYKGK A+ ++ P+F+ +SG + KEG +LL
Sbjct: 64 TSSRSSPSSAPPVGESPPKVFVGHSIYKGKAALTVEPRSPEFSPLDSGAYKLVKEGFVLL 123
Query: 703 EFAPAKGVRQYDWDRKQLFALSVSEVGQLLAMGPQDSCEFFHDPNMQKSDAGKVIKVLKV 524
+FAPA VRQYDW RKQ+F+LSV+E+G L+++ + SCEFFHDPN KSD GKV K+LKV
Sbjct: 124 QFAPAASVRQYDWTRKQVFSLSVTEIGHLVSLDAKGSCEFFHDPNKGKSDEGKVRKLLKV 183
Query: 523 ASIPGKASYSFVLNVSDKKLNVEEKLYMPVEKGELAVMKSSFNSILPYLIGWNFVMNSAH 344
+P + + F L+V +K LN++E +Y+PV K E V+ S+FN ILPYL+GW+ NS
Sbjct: 184 EPLPDGSGHFFNLSVQNKVLNIDENIYIPVTKAEYTVLTSAFNYILPYLLGWHAYANSIK 243
Query: 343 TTD 335
D
Sbjct: 244 PDD 246
>ref|NP_001077872.1| single-stranded DNA-binding protein WHY3 [Arabidopsis thaliana]
gi|330250525|gb|AEC05619.1| single-stranded DNA-binding
protein WHY3 [Arabidopsis thaliana]
Length = 267
Score = 180 bits (457), Expect = 7e-43
Identities = 86/167 (51%), Positives = 118/167 (70%)
Frame = -2
Query: 835 SGKVFAPYAIYKGKTAMRIKLIQPQFTKFNSGYLRRTKEGIILLEFAPAKGVRQYDWDRK 656
S + + ++IYKGK A+ I+ P+F SG + TKEG +LL+FAPA GVRQYDW RK
Sbjct: 82 SPRFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRK 141
Query: 655 QLFALSVSEVGQLLAMGPQDSCEFFHDPNMQKSDAGKVIKVLKVASIPGKASYSFVLNVS 476
Q+F+LSV+E+G L+++GP++SCEFFHDP K D GKV KVLKV +P + F L+V
Sbjct: 142 QVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKGDEGKVRKVLKVEPLPDGSGRFFNLSVQ 201
Query: 475 DKKLNVEEKLYMPVEKGELAVMKSSFNSILPYLIGWNFVMNSAHTTD 335
+K LNV+E +Y+P+ K E AV+ S+FN +LP+LIGW+ NS D
Sbjct: 202 NKLLNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFANSIKPED 248
>ref|XP_002875143.1| ATWHY3/PTAC11 [Arabidopsis lyrata subsp. lyrata]
gi|297320981|gb|EFH51402.1| ATWHY3/PTAC11 [Arabidopsis
lyrata subsp. lyrata]
Length = 268
Score = 180 bits (456), Expect = 9e-43
Identities = 89/170 (52%), Positives = 120/170 (70%), Gaps = 1/170 (0%)
Frame = -2
Query: 841 GQSGKVFAPYAIYKGKTAMRIKLIQPQFTKFNSGYLRRTKEGIILLEFAPAKGVRQYDWD 662
G S + + ++IYKGK A+ I+ P+F SG + TKEG +LL+FAPA GVRQYDW
Sbjct: 80 GSSPRFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWS 139
Query: 661 RKQLFALSVSEVGQLLAMGPQDSCEFFHDPNMQK-SDAGKVIKVLKVASIPGKASYSFVL 485
RKQ+F+LSV+E+G L+++GP++SCEFFHDP K SD GKV KVLKV +P + F L
Sbjct: 140 RKQVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNL 199
Query: 484 NVSDKKLNVEEKLYMPVEKGELAVMKSSFNSILPYLIGWNFVMNSAHTTD 335
+V +K LNV+E +Y+P+ K E AV+ S+FN ILP+LIGW+ NS D
Sbjct: 200 SVQNKLLNVDESVYIPITKAEFAVLISAFNFILPHLIGWSAFANSIKPED 249
>pdb|4KOQ|A Chain A, Crystal Structure Of Why3 From Arabidopsis Thaliana
Length = 180
Score = 179 bits (455), Expect = 1e-42
Identities = 85/162 (52%), Positives = 117/162 (72%)
Frame = -2
Query: 835 SGKVFAPYAIYKGKTAMRIKLIQPQFTKFNSGYLRRTKEGIILLEFAPAKGVRQYDWDRK 656
S + + ++IYKGK A+ I+ P+F SG + TKEG +LL+FAPA GVRQYDW RK
Sbjct: 6 SPRFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRK 65
Query: 655 QLFALSVSEVGQLLAMGPQDSCEFFHDPNMQKSDAGKVIKVLKVASIPGKASYSFVLNVS 476
Q+F+LSV+E+G L+++GP++SCEFFHDP K D GKV KVLKV +P + F L+V
Sbjct: 66 QVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKGDEGKVRKVLKVEPLPDGSGRFFNLSVQ 125
Query: 475 DKKLNVEEKLYMPVEKGELAVMKSSFNSILPYLIGWNFVMNS 350
+K LNV+E +Y+P+ K E AV+ S+FN +LP+LIGW+ NS
Sbjct: 126 NKLLNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFANS 167
>ref|XP_006842726.1| hypothetical protein AMTR_s00133p00020030 [Amborella trichopoda]
gi|548844840|gb|ERN04401.1| hypothetical protein
AMTR_s00133p00020030 [Amborella trichopoda]
Length = 274
Score = 179 bits (455), Expect = 1e-42
Identities = 83/169 (49%), Positives = 122/169 (72%)
Frame = -2
Query: 841 GQSGKVFAPYAIYKGKTAMRIKLIQPQFTKFNSGYLRRTKEGIILLEFAPAKGVRQYDWD 662
G SG+V+ ++I+KGK A+ I+ P+FT SG + K+G ILL+FAPA G RQYDW+
Sbjct: 87 GLSGRVYVGHSIFKGKAALTIEPKAPEFTALESGACKVVKDGSILLQFAPAVGTRQYDWN 146
Query: 661 RKQLFALSVSEVGQLLAMGPQDSCEFFHDPNMQKSDAGKVIKVLKVASIPGKASYSFVLN 482
RKQ+F+LSV+E+G L+++G +D+CEF+HDP +S+ GK+ KVLKV +P + Y F L+
Sbjct: 147 RKQVFSLSVAEIGALMSLGMKDTCEFYHDPFKGRSEEGKIRKVLKVEPLPDGSGYFFNLS 206
Query: 481 VSDKKLNVEEKLYMPVEKGELAVMKSSFNSILPYLIGWNFVMNSAHTTD 335
VS++ LN+++ +Y+PV K E AV+ S+FN ILPYL+GW+ S D
Sbjct: 207 VSNRPLNIDDSIYIPVTKAEFAVIVSAFNFILPYLLGWHAFAESIRPVD 255