BLASTX nr result
ID: Ephedra28_contig00019413
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra28_contig00019413 (1567 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EOY16398.1| Tetratricopeptide repeat (TPR)-like superfamily p... 256 2e-65 gb|EMJ25423.1| hypothetical protein PRUPE_ppa017885mg [Prunus pe... 249 3e-63 gb|ESW09460.1| hypothetical protein PHAVU_009G129200g [Phaseolus... 246 1e-62 ref|XP_003526650.2| PREDICTED: pentatricopeptide repeat-containi... 244 6e-62 ref|XP_006581591.1| PREDICTED: pentatricopeptide repeat-containi... 244 6e-62 gb|EXB60130.1| hypothetical protein L484_013395 [Morus notabilis] 244 1e-61 ref|XP_002307458.2| pentatricopeptide repeat-containing family p... 242 4e-61 ref|XP_002520317.1| pentatricopeptide repeat-containing protein,... 237 1e-59 ref|XP_006472835.1| PREDICTED: pentatricopeptide repeat-containi... 236 2e-59 ref|XP_006849933.1| hypothetical protein AMTR_s00022p00121040 [A... 236 2e-59 ref|NP_001147833.1| GTP binding protein [Zea mays] gi|195614010|... 236 3e-59 ref|XP_006434266.1| hypothetical protein CICLE_v10000990mg [Citr... 235 3e-59 ref|XP_002889139.1| pentatricopeptide repeat-containing protein ... 235 3e-59 gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thal... 235 4e-59 ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [S... 235 4e-59 ref|NP_177860.2| pentatricopeptide repeat-containing protein [Ar... 235 4e-59 ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays] ... 234 8e-59 ref|XP_006301167.1| hypothetical protein CARUB_v10021564mg, part... 233 1e-58 ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containi... 233 1e-58 ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containi... 233 2e-58 >gb|EOY16398.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 [Theobroma cacao] gi|508724502|gb|EOY16399.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 [Theobroma cacao] gi|508724503|gb|EOY16400.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 [Theobroma cacao] gi|508724504|gb|EOY16401.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 [Theobroma cacao] gi|508724505|gb|EOY16402.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 [Theobroma cacao] Length = 480 Score = 256 bits (653), Expect = 2e-65 Identities = 143/419 (34%), Positives = 235/419 (56%), Gaps = 4/419 (0%) Frame = +3 Query: 279 VPNTLVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEV 458 VP +VE LK F+ AGML YR F WAEKQ Y +++ AY ++++SL + R+Y+++W++ Sbjct: 61 VPPEVVEDVLKRFENAGMLAYRFFEWAEKQRNY-MHSIRAYHTMIESLAKIRQYQIMWDL 119 Query: 459 VDEMKKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCR 638 V++M+ +L ETF I+ R AR ++ +E V FN ME KY ++ C+ Sbjct: 120 VNKMRNKSMLNVETFCIIMRRYARVQKVEETVYTFNIME-KYDVPPNLAAFNGLLSTLCK 178 Query: 639 RRFPRTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDT 818 + R A+E+ K K+ PD ++Y ILLEGW P LP IFR++ MG + D Sbjct: 179 SKNVRKAQEIFD---KMKDRFVPDSKTYSILLEGWGRAPNLPKAREIFREMVDMGCDPDI 235 Query: 819 GVYGIYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKG 995 YGI + L + G+ + A++ REM G +P S+IYS+++ ++ +++ A+ + Sbjct: 236 VTYGIMVDILCKSGRVDEAIEIVREMDSNGCRPTSFIYSVLVHTYGIENRIEDAVDAFLE 295 Query: 996 MKNSGFLLDIDGCNALVGAFCSSGRFSDAYELL---ETEKAVPNARTHNLIFDSMLRYKE 1166 M+ +G D+ NAL+GAFC + + Y +L +++ PNART N+I +S++ E Sbjct: 296 MERNGIKADVVVYNALIGAFCKVNKLKNVYRVLNEMDSKGVAPNARTCNIILNSLIGRGE 355 Query: 1167 KDHVVSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCI 1346 D F ++ E D + Y ++++ F LD +W+ M K+ PT + + Sbjct: 356 TDEAFKVFRRMIKE-CEPDADTYTIMIKMFCDRDELDMAFKVWKYMRLKQFIPTMHTFSV 414 Query: 1347 MVNAFLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 +++ +K N KA EEML KGI+P TF RLR+ L+K+ + ++L +L KM L Sbjct: 415 LIHGLCEKGNAAKACILLEEMLEKGIQPSGLTFGRLRQLLIKEGREDVLKFLQEKMNLL 473 >gb|EMJ25423.1| hypothetical protein PRUPE_ppa017885mg [Prunus persica] Length = 464 Score = 249 bits (635), Expect = 3e-63 Identities = 136/415 (32%), Positives = 236/415 (56%), Gaps = 4/415 (0%) Frame = +3 Query: 291 LVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEVVDEM 470 +VE+ L F AGM+ YR F WA KQ Y +++ AY ++++SL + R+Y+++WE+V+ M Sbjct: 49 MVEEVLMRFQNAGMVAYRFFEWAGKQRNYT-HSVKAYHAMIESLAKIRQYQIMWELVNSM 107 Query: 471 KKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCRRRFP 650 + + ETF I+ + ARA++ +EA+ FN ME KY + ++ C+ + Sbjct: 108 RAKRMQNMETFSIIMRKYARAQKVEEALYTFNVME-KYDCAPNLAAFNGLLSALCKSKNV 166 Query: 651 RTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDTGVYG 830 R A+E+ K K+ +PD ++Y IL++GW P LP +FR++ G D YG Sbjct: 167 RKAQEIFD---KMKDRFEPDSKTYSILIDGWGKDPNLPKAREVFREMTDAGCNPDIVTYG 223 Query: 831 IYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKGMKNS 1007 I + L + G+ + A++ R M D G P S+IYS+++ V+ +++ A+ + M+ + Sbjct: 224 IMVDVLCKAGRVDEAIEIVRGMDDSGCTPTSFIYSVLVHTYGVEHRIEDAVDAFLEMERN 283 Query: 1008 GFLLDIDGCNALVGAFCSSGRFSDAYELL---ETEKAVPNARTHNLIFDSMLRYKEKDHV 1178 G D+ NAL+GAFC + +F + Y +L +++ PN+RT N+I +S++ E D Sbjct: 284 GIKADVVVYNALIGAFCKANKFKNVYRVLNDMDSKGVKPNSRTCNIILNSLIDRGETDEA 343 Query: 1179 VSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCIMVNA 1358 S F K+ E D + Y ++++ F L+ +W+ M ++ P+ Y +++N Sbjct: 344 FSVFRKMIKLC-EPDADTYTMMIKMFCEKDELEMALKVWKYMKQRRFVPSMHTYSVLING 402 Query: 1359 FLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 +K NT KA + EEM+ KGIRP TF RLR+ L+K+ + ++L +L+ K+ L Sbjct: 403 LCEKGNTSKACVFLEEMIEKGIRPAGVTFGRLRQLLIKEGREDVLNFLNEKINLL 457 >gb|ESW09460.1| hypothetical protein PHAVU_009G129200g [Phaseolus vulgaris] gi|561010554|gb|ESW09461.1| hypothetical protein PHAVU_009G129200g [Phaseolus vulgaris] Length = 480 Score = 246 bits (629), Expect = 1e-62 Identities = 140/415 (33%), Positives = 229/415 (55%), Gaps = 4/415 (0%) Frame = +3 Query: 291 LVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEVVDEM 470 LVE LK F+ AGM +R F W+EKQ GY +++ AY +++SL + R+Y++VW++V+ M Sbjct: 65 LVENVLKRFENAGMSAFRFFEWSEKQRGYS-HSIRAYHLMIESLAKIRQYQIVWDLVNAM 123 Query: 471 KKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCRRRFP 650 +K G+L ETF ++ + ARA + DEAV FN M DKY ++ C+ Sbjct: 124 RKKGMLNVETFCIMMRKYARANKVDEAVYTFNVM-DKYDVVPNLAAFNGLLSALCKSNNV 182 Query: 651 RTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDTGVYG 830 R A+E+ ++ R PD ++Y ILLEGW P LP +F ++ G + D YG Sbjct: 183 RKAQEIFDAMKSR---FVPDAKTYSILLEGWGKAPNLPRAREVFGEMVRAGCDPDVVTYG 239 Query: 831 IYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKGMKNS 1007 I + L + G+ + A++ +EM + +P S+IYS++I V+ +++ A+ ++ M+ Sbjct: 240 IMVDVLCKAGRVDEAVEVVKEMDESNCRPTSFIYSVLIHTYGVEHRIEDAIDTFQEMERK 299 Query: 1008 GFLLDIDGCNALVGAFCSSGRFSDAYELL---ETEKAVPNARTHNLIFDSMLRYKEKDHV 1178 G D+ NAL+GAFC +F + + +L E PN+RT N+I SM+ + D Sbjct: 300 GIKADVVVYNALIGAFCKVNKFKNVHRVLQEMEINGVAPNSRTCNVIISSMIGQGQTDRA 359 Query: 1179 VSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCIMVNA 1358 F ++ E D + Y ++++ F +++ IW+ M SK+ P+ + +V Sbjct: 360 FRVFRRMIKLC-EPDADTYTMMIKMFCEKNDVEMALRIWKFMKSKQFVPSMHTFSALVKG 418 Query: 1359 FLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 +K + KA EEM+ KGIRP TF RLR+ LLK+ + ++L +L KM L Sbjct: 419 LCEKGDAAKACVVLEEMIEKGIRPSRITFGRLRQLLLKEGREDVLKFLHEKMNVL 473 Score = 60.1 bits (144), Expect = 3e-06 Identities = 53/257 (20%), Positives = 109/257 (42%), Gaps = 5/257 (1%) Frame = +3 Query: 801 GFELDTGVYGIYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGLVKTQVDLAL 980 G+ Y + I +L + + + D M+ KG MM + +VD A+ Sbjct: 92 GYSHSIRAYHLMIESLAKIRQYQIVWDLVNAMRKKGMLNVETFCIMMRKYARANKVDEAV 151 Query: 981 SLYKGMKNSGFLLDIDGCNALVGAFCSSGRFSDAYELLETEKA--VPNARTHNLIFDSML 1154 + M + ++ N L+ A C S A E+ + K+ VP+A+T++++ + Sbjct: 152 YTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKSRFVPDAKTYSILLEGWG 211 Query: 1155 RYKEKDHVVSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAV 1334 + F ++ +G + D Y +++ G +D+ + + M PT+ Sbjct: 212 KAPNLPRAREVFGEMVRAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDESNCRPTSF 271 Query: 1335 GYCIMVNAFLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKM 1514 Y ++++ + + E A F+EM KGI+ + ++ L K K + + ++M Sbjct: 272 IYSVLIHTYGVEHRIEDAIDTFQEMERKGIKADVVVYNALIGAFCKVNKFKNVHRVLQEM 331 Query: 1515 EALG---ESRTLKMDVA 1556 E G SRT + ++ Sbjct: 332 EINGVAPNSRTCNVIIS 348 >ref|XP_003526650.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like isoform X1 [Glycine max] Length = 454 Score = 244 bits (624), Expect = 6e-62 Identities = 141/415 (33%), Positives = 226/415 (54%), Gaps = 4/415 (0%) Frame = +3 Query: 291 LVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEVVDEM 470 LVE LK F+ AGM +R F WAEKQ GY +++ AY +++SL + R+Y++VW++V M Sbjct: 39 LVENVLKRFENAGMPAFRFFEWAEKQRGYS-HSIRAYHLMIESLAKIRQYQIVWDLVSAM 97 Query: 471 KKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCRRRFP 650 +K G+L ETF ++ + ARA + DEAV FN M DKY ++ C+ Sbjct: 98 RKKGMLNVETFCIMMRKYARANKVDEAVYTFNVM-DKYDVVPNLAAFNGLLSALCKSNNV 156 Query: 651 RTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDTGVYG 830 R A+E+ ++ + PD +SY ILLEGW P LP +FR++ G + D YG Sbjct: 157 RKAQEIFDAMKGQ---FVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYG 213 Query: 831 IYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKGMKNS 1007 I + L + G+ + A++ +EM +P S+IYS+++ V+ +++ A+ + M Sbjct: 214 IMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKK 273 Query: 1008 GFLLDIDGCNALVGAFCSSGRFSDAYELL---ETEKAVPNARTHNLIFDSMLRYKEKDHV 1178 G D+ NAL+GAFC +F + + +L E+ PN+RT N+I SM+ + D Sbjct: 274 GIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRA 333 Query: 1179 VSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCIMVNA 1358 F ++ E D + Y ++++ F L+ IW+ M SK+ P+ + ++ Sbjct: 334 FRVFCRMIKLC-EPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKG 392 Query: 1359 FLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 +K N KA EEM+ KGIRP TF RLR+ L+K+ + ++L +L KM L Sbjct: 393 LCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDVLKFLHEKMNLL 447 >ref|XP_006581591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like isoform X2 [Glycine max] gi|571460055|ref|XP_006581592.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like isoform X3 [Glycine max] gi|571460057|ref|XP_006581593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like isoform X4 [Glycine max] gi|571460059|ref|XP_006581594.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like isoform X5 [Glycine max] gi|571460061|ref|XP_006581595.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like isoform X6 [Glycine max] Length = 481 Score = 244 bits (624), Expect = 6e-62 Identities = 141/415 (33%), Positives = 226/415 (54%), Gaps = 4/415 (0%) Frame = +3 Query: 291 LVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEVVDEM 470 LVE LK F+ AGM +R F WAEKQ GY +++ AY +++SL + R+Y++VW++V M Sbjct: 66 LVENVLKRFENAGMPAFRFFEWAEKQRGYS-HSIRAYHLMIESLAKIRQYQIVWDLVSAM 124 Query: 471 KKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCRRRFP 650 +K G+L ETF ++ + ARA + DEAV FN M DKY ++ C+ Sbjct: 125 RKKGMLNVETFCIMMRKYARANKVDEAVYTFNVM-DKYDVVPNLAAFNGLLSALCKSNNV 183 Query: 651 RTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDTGVYG 830 R A+E+ ++ + PD +SY ILLEGW P LP +FR++ G + D YG Sbjct: 184 RKAQEIFDAMKGQ---FVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYG 240 Query: 831 IYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKGMKNS 1007 I + L + G+ + A++ +EM +P S+IYS+++ V+ +++ A+ + M Sbjct: 241 IMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKK 300 Query: 1008 GFLLDIDGCNALVGAFCSSGRFSDAYELL---ETEKAVPNARTHNLIFDSMLRYKEKDHV 1178 G D+ NAL+GAFC +F + + +L E+ PN+RT N+I SM+ + D Sbjct: 301 GIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRA 360 Query: 1179 VSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCIMVNA 1358 F ++ E D + Y ++++ F L+ IW+ M SK+ P+ + ++ Sbjct: 361 FRVFCRMIKLC-EPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKG 419 Query: 1359 FLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 +K N KA EEM+ KGIRP TF RLR+ L+K+ + ++L +L KM L Sbjct: 420 LCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDVLKFLHEKMNLL 474 >gb|EXB60130.1| hypothetical protein L484_013395 [Morus notabilis] Length = 478 Score = 244 bits (622), Expect = 1e-61 Identities = 138/415 (33%), Positives = 235/415 (56%), Gaps = 4/415 (0%) Frame = +3 Query: 291 LVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEVVDEM 470 + E L F AG+L +R F+WA KQ GY +++ A+ + ++SL + R+Y+L+WE+V M Sbjct: 63 IAEHVLARFQNAGLLAHRFFQWAAKQRGYS-HSVRAHHAAIESLAKIRQYQLMWELVSAM 121 Query: 471 KKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCRRRFP 650 + L ETF I+ + ARAR+ DEA+ FN ME K+G S+++ C+ R Sbjct: 122 RSNDTLNVETFCIIMRKYARARKIDEALYTFNVME-KHGVSQNLAAFNGLLSALCKSRNV 180 Query: 651 RTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDTGVYG 830 R A+E+ K K+ +PD ++Y IL++GW P LP +FR++ +G + D YG Sbjct: 181 RKAQEIFD---KMKDRFEPDSKTYSILIDGWGKEPNLPRAREVFREMVDLGIKPDVVTYG 237 Query: 831 IYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKGMKNS 1007 I + L + G+ + A++ R M G KP S+IYS+++ V+++++ A+ + M+ Sbjct: 238 IMVDVLCKAGRVDEAIESVRHMDSNGCKPTSFIYSVLVHTYGVESRIEDAVDAFMEMERR 297 Query: 1008 GFLLDIDGCNALVGAFCSSGRFSDAYELLE--TEKAV-PNARTHNLIFDSMLRYKEKDHV 1178 G D+ NAL+GAF RF +A +L K V PN+RT N++ + ++ + Sbjct: 298 GVEADVVVYNALIGAFARVDRFKNAKRVLNDMNSKGVRPNSRTCNVMLNGLIGRGRTEEA 357 Query: 1179 VSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCIMVNA 1358 V F +++ E D + Y ++++ F G +D +W+ M SK+ P+ + +++N Sbjct: 358 VKVFRRMSKVC-EPDADTYTMMIKMFCEKGEVDMALEVWKHMKSKRFVPSMHMFSVLING 416 Query: 1359 FLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 +KK+ +A EEM+ KGIRP TF RLR+ L+K+ + ++L +L +KM L Sbjct: 417 LCEKKDASRACVLMEEMIEKGIRPAGVTFGRLRQLLMKEGRDDVLKFLQQKMNLL 471 >ref|XP_002307458.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] gi|550339385|gb|EEE94454.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] Length = 478 Score = 242 bits (617), Expect = 4e-61 Identities = 140/419 (33%), Positives = 231/419 (55%), Gaps = 4/419 (0%) Frame = +3 Query: 279 VPNTLVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEV 458 V +V+ LK F+ AGM+ YR F WAEKQ Y +++ A+ +++DSL + R+Y+L+W+V Sbjct: 58 VSEQIVDDVLKKFENAGMVAYRFFEWAEKQRHYN-HSVKAFHTVIDSLAKIRQYQLMWDV 116 Query: 459 VDEMKKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCR 638 V MK ++ ETF I+ + ARA++ +EAV FN M DKY ++ C+ Sbjct: 117 VKVMKSKRMVNVETFCIIMRKYARAQKVEEAVYTFNIM-DKYDVPPNLAAFNGLLSALCK 175 Query: 639 RRFPRTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDT 818 + R A+E+ ++ R PD ++Y ILLEGW P LP IFR++ S G D Sbjct: 176 SKNVRKAQEIFDSIKDR---FVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDI 232 Query: 819 GVYGIYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKG 995 YGI + L + G+ + AL EM KP +IYS+++ ++ +++ A+S + Sbjct: 233 VTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLE 292 Query: 996 MKNSGFLLDIDGCNALVGAFCSSGRFSDAYELL---ETEKAVPNARTHNLIFDSMLRYKE 1166 M+N+G D+ NAL+GAFC + R + Y +L + + PN+RT N+I S++ E Sbjct: 293 MENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGE 352 Query: 1167 KDHVVSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCI 1346 D F ++ E D + Y ++++ F L K +W+ M K+ P+ + + Sbjct: 353 TDEAYRVFLRMIKVC-EPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQV 411 Query: 1347 MVNAFLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 ++N +K + +A EEM+ KGIRP TF RLR+ L+K+ + ++L +L +K+ L Sbjct: 412 LINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGREDVLKFLQKKINVL 470 >ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 439 Score = 237 bits (604), Expect = 1e-59 Identities = 134/415 (32%), Positives = 231/415 (55%), Gaps = 4/415 (0%) Frame = +3 Query: 291 LVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEVVDEM 470 +VE L+ F+ AGM+ YR F WAEKQ Y +++ AY ++++SL + R+Y+++W++++ M Sbjct: 24 IVEDVLRRFENAGMVAYRFFEWAEKQLHYT-HSVRAYHTMIESLAKIRQYQIMWDLINAM 82 Query: 471 KKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCRRRFP 650 K+ +L ETF I+ + ARA++ +EAV FN ME KY ++ C+ + Sbjct: 83 KRKRMLNVETFCIIMRKYARAQKLEEAVYTFNVME-KYDVPPNLAAFNGLFSALCKSKNV 141 Query: 651 RTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDTGVYG 830 R A+E+ + R PD ++Y ILLEGW P LP IFR++ +G D YG Sbjct: 142 RKAQEIFDSSKDR---FVPDSKTYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIVTYG 198 Query: 831 IYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKGMKNS 1007 I + L + G+ + ALD +EM KP S+IYS++I ++ +++ A+ + GM+ + Sbjct: 199 IMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTFLGMEKN 258 Query: 1008 GFLLDIDGCNALVGAFCSSGRFSDAYELL---ETEKAVPNARTHNLIFDSMLRYKEKDHV 1178 G D+ NAL+GAFC +F + Y +L + + PN+RT N+I ++++ E D Sbjct: 259 GVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGETDEA 318 Query: 1179 VSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCIMVNA 1358 F ++ E D + Y ++++ F L+ +W+ M K P+ + +++N Sbjct: 319 FRVFRRMI-KVCEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPSMHTFSVLING 377 Query: 1359 FLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 ++ + A E+M+ KGIRP TF RLR L+K+ + ++L +L +K+ L Sbjct: 378 LCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIKEGREDVLEFLQQKINVL 432 >ref|XP_006472835.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like isoform X1 [Citrus sinensis] gi|568837650|ref|XP_006472836.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like isoform X2 [Citrus sinensis] gi|568837652|ref|XP_006472837.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like isoform X3 [Citrus sinensis] gi|568837654|ref|XP_006472838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like isoform X4 [Citrus sinensis] Length = 480 Score = 236 bits (603), Expect = 2e-59 Identities = 132/415 (31%), Positives = 231/415 (55%), Gaps = 4/415 (0%) Frame = +3 Query: 291 LVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEVVDEM 470 +VE L+ F AG L + F+W EKQ Y +++ AY S+++SL + R+Y+++W++V+ M Sbjct: 65 IVEDVLEKFKNAGTLAFCFFKWTEKQQNYE-HSVRAYHSMIESLAKIRQYQIMWDLVNAM 123 Query: 471 KKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCRRRFP 650 + +L ETF I+ + AR ++ +EAV FN M+ KYG ++++ C+ + Sbjct: 124 RTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQ-KYGVTQNLAAFNGLLSALCKSKNV 182 Query: 651 RTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDTGVYG 830 R A+E+ ++ R PD ++Y ILLEGW P LP IFR++ G D YG Sbjct: 183 RKAQEIFDCMKDR---FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYG 239 Query: 831 IYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKGMKNS 1007 I + L + G+ + AL + M +P S+IYS+++ V+ +++ A+ + M+ + Sbjct: 240 IMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKN 299 Query: 1008 GFLLDIDGCNALVGAFCSSGRFSDAYELLE---TEKAVPNARTHNLIFDSMLRYKEKDHV 1178 G L D+ NAL+GAFC + +F + Y +L+ ++ PN+RT N+I + ++ E D Sbjct: 300 GILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEA 359 Query: 1179 VSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCIMVNA 1358 F ++ E D + Y ++++ F G L+K +W+ M K+ P+ + +++N Sbjct: 360 YRVFRRMIKLC-EADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLING 418 Query: 1359 FLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 DK + E+M+ KGIRP +TF +LRK L+K+ + ++L +L KM L Sbjct: 419 LCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKMNLL 473 >ref|XP_006849933.1| hypothetical protein AMTR_s00022p00121040 [Amborella trichopoda] gi|548853531|gb|ERN11514.1| hypothetical protein AMTR_s00022p00121040 [Amborella trichopoda] Length = 438 Score = 236 bits (602), Expect = 2e-59 Identities = 140/416 (33%), Positives = 226/416 (54%), Gaps = 5/416 (1%) Frame = +3 Query: 291 LVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEVVDEM 470 LVE LK F+ AGM YR F+W +KQ Y +++ +Y ++ SL + R+Y+L+W++V++M Sbjct: 23 LVEDILKRFENAGMQAYRFFQWVDKQINYS-HSVKSYHIMIGSLAKIRQYQLMWDLVNDM 81 Query: 471 KKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCRRRFP 650 ++ IL ETF +I + ARA + DEAV FN M DK+G + ++ C+ + Sbjct: 82 RRKDILNNETFCIMIRKYARAHKVDEAVYTFNVM-DKFGLTPNLTAFNSLLSAFCKAKNV 140 Query: 651 RTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDTGVYG 830 R A+E+ ++ R E P+ +Y ILLEGW P LP IF ++ E D YG Sbjct: 141 RKAQEIFDDMKDRFE---PNSITYSILLEGWGKEPNLPKAREIFLEMIDKNCEPDIVTYG 197 Query: 831 IYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKGMKNS 1007 I I +L + G+ A +EM+ +G P SYIYS++I V+ + A+ + M+ Sbjct: 198 IMIDSLCKAGRVEEATGYMKEMRSRGCIPTSYIYSILIHTYGVERSIGDAVDSFLEMEKD 257 Query: 1008 GFLLDIDGCNALVGAFCSSGRFSDAYELLET---EKAVPNARTHNLIFDSMLRYKEKDHV 1178 G D+ NAL+ AFC + +F + Y +LE + PN+RT N+I + ++ E D Sbjct: 258 GIKADVAAYNALISAFCRAKKFKNVYRVLEEMDKKSVAPNSRTCNIILNGLIGSGETDEA 317 Query: 1179 VSEFEK-VAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCIMVN 1355 F+ + H E D + Y ++++ F L+K +W+ M K+ P+ + +++N Sbjct: 318 FRIFKSMIKHC--EPDSDTYTMMIKMFCEIDKLEKAMKVWKYMGLKQFVPSMHTFSVLIN 375 Query: 1356 AFLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 K KA E+M+ KGIRP TF R+R+ LLK+ + ++L +L KM L Sbjct: 376 GLCRKGELNKACILLEDMIEKGIRPPDLTFRRVRQLLLKEGRKDVLEFLVEKMNVL 431 >ref|NP_001147833.1| GTP binding protein [Zea mays] gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays] gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays] Length = 547 Score = 236 bits (601), Expect = 3e-59 Identities = 126/415 (30%), Positives = 235/415 (56%), Gaps = 4/415 (0%) Frame = +3 Query: 291 LVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEVVDEM 470 LV + LK AGML FRWAE+Q G+ + T + +++++L + +++RLVW +V+ M Sbjct: 129 LVAEVLKNLSNAGMLALAFFRWAERQEGFSY-TAEGFHNLIEALGKIKQFRLVWSLVETM 187 Query: 471 KKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCRRRFP 650 + G+L ++TF I+ R ARAR+ EAVE F M +G ++ + + Sbjct: 188 RCRGLLSKDTFKLIVRRYARARKVKEAVETFEKMSI-FGLKTELSDYNWLIDTLSKSKQV 246 Query: 651 RTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDTGVYG 830 + A+ + + + KRK PDL++Y +L+EGW L V+ +++++ G D YG Sbjct: 247 KKAQAIYKEM-KRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYG 305 Query: 831 IYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKGMKNS 1007 + I A + GK + A+ F EM+ G P ++Y M+I GL + ++D AL ++ K S Sbjct: 306 MLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEHYKKS 365 Query: 1008 GFLLDIDGCNALVGAFCSSGRFSDAYELLETE---KAVPNARTHNLIFDSMLRYKEKDHV 1178 GF +++ CNA+VGA+C + +F A+++++ K PN+RT+++I +++ ++ + Sbjct: 366 GFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGPNSRTYDVILHYLIKSQKFEEA 425 Query: 1179 VSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCIMVNA 1358 + F+++ G E N Y +++ F ++G +D +W+ M K P + ++N Sbjct: 426 YNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQMGEKGVLPCMHMFSALING 485 Query: 1359 FLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 + E+A YF+EML+KGIRP + F L++ L++ +++L ++ K++A+ Sbjct: 486 LCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVQGGRISLAQEVALKLDAI 540 >ref|XP_006434266.1| hypothetical protein CICLE_v10000990mg [Citrus clementina] gi|567883417|ref|XP_006434267.1| hypothetical protein CICLE_v10000990mg [Citrus clementina] gi|567883419|ref|XP_006434268.1| hypothetical protein CICLE_v10000990mg [Citrus clementina] gi|567883421|ref|XP_006434269.1| hypothetical protein CICLE_v10000990mg [Citrus clementina] gi|567883423|ref|XP_006434270.1| hypothetical protein CICLE_v10000990mg [Citrus clementina] gi|557536388|gb|ESR47506.1| hypothetical protein CICLE_v10000990mg [Citrus clementina] gi|557536389|gb|ESR47507.1| hypothetical protein CICLE_v10000990mg [Citrus clementina] gi|557536390|gb|ESR47508.1| hypothetical protein CICLE_v10000990mg [Citrus clementina] gi|557536391|gb|ESR47509.1| hypothetical protein CICLE_v10000990mg [Citrus clementina] gi|557536392|gb|ESR47510.1| hypothetical protein CICLE_v10000990mg [Citrus clementina] Length = 480 Score = 235 bits (600), Expect = 3e-59 Identities = 132/415 (31%), Positives = 231/415 (55%), Gaps = 4/415 (0%) Frame = +3 Query: 291 LVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEVVDEM 470 +VE L+ F AG L + F+WAEKQ Y +++ AY S+++SL + R+Y+++W++V+ M Sbjct: 65 IVEDVLEKFKNAGTLAFCFFKWAEKQQNYE-HSVRAYHSMIESLAKIRQYQIMWDLVNAM 123 Query: 471 KKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCRRRFP 650 + +L ETF I+ + AR ++ +EAV FN M+ KYG ++++ C+ + Sbjct: 124 RTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQ-KYGVTQNLAAFNGLLSALCKSKNV 182 Query: 651 RTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDTGVYG 830 R A+E+ ++ R PD ++Y ILLEGW P LP IFR++ G D YG Sbjct: 183 RKAQEIFDCMKDR---FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYG 239 Query: 831 IYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKGMKNS 1007 I + L + G+ + AL + M +P S+IYS+++ V+ +++ A+ + M+ + Sbjct: 240 IMVDVLCKAGRVDEALGIVKSMDSTVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKN 299 Query: 1008 GFLLDIDGCNALVGAFCSSGRFSDAYELLE---TEKAVPNARTHNLIFDSMLRYKEKDHV 1178 G D+ NAL+GAFC + +F + Y +L+ ++ PN+RT N+I + ++ E D Sbjct: 300 GIQADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEA 359 Query: 1179 VSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCIMVNA 1358 F ++ E D + Y ++++ F G L+K +W+ M K+ P+ + +++N Sbjct: 360 YRVFRRMIKLC-EADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLING 418 Query: 1359 FLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 DK + E+M+ KGIRP +TF +LRK L+K+ + ++L +L KM L Sbjct: 419 LCDKGIVSDSCVLLEDMIEKGIRPSGETFGKLRKLLIKEGREDVLKFLQEKMNLL 473 >ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 482 Score = 235 bits (600), Expect = 3e-59 Identities = 133/415 (32%), Positives = 228/415 (54%), Gaps = 4/415 (0%) Frame = +3 Query: 291 LVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEVVDEM 470 +VE L F AG+L YR F+W+EKQ Y +++ AY +++S + R+Y+L+W++++ M Sbjct: 67 VVEDVLYRFRNAGLLAYRFFQWSEKQRHYE-HSVRAYHMMIESTAKIRQYKLMWDLINAM 125 Query: 471 KKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCRRRFP 650 K +L ETF ++ + ARA++ DEA+ FN ME KY ++ C+ + Sbjct: 126 MKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVME-KYDLPPNLVAFNGLLSALCKSKNV 184 Query: 651 RTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDTGVYG 830 R A+E+ + +R R PD ++Y ILLEGW P LP +FR++ G D Y Sbjct: 185 RKAQEIFENMRDR---FTPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYS 241 Query: 831 IYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKGMKNS 1007 I + L + G+ + AL R M KP ++IYS+++ +T+++ A+ + M+ S Sbjct: 242 IMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERS 301 Query: 1008 GFLLDIDGCNALVGAFCSSGRFSDAYELLETEKA---VPNARTHNLIFDSMLRYKEKDHV 1178 G D+ N+L+GAFC + R + Y +L+ K+ PN+++ N+I ++ EKD Sbjct: 302 GMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEKDEA 361 Query: 1179 VSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCIMVNA 1358 F K+ E D + Y ++++ F ++ +W+ M K P+ + +++N Sbjct: 362 FDVFRKMIKVC-EPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLING 420 Query: 1359 FLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 ++ NT+KA EEM+ GIRP TF RLR+ LLK+++ ++L +L+ KM L Sbjct: 421 LCEEPNTQKACVLLEEMIEMGIRPSGATFGRLRQLLLKEDREDVLKFLNEKMNVL 475 >gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana] Length = 481 Score = 235 bits (599), Expect = 4e-59 Identities = 132/419 (31%), Positives = 229/419 (54%), Gaps = 4/419 (0%) Frame = +3 Query: 279 VPNTLVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEV 458 V +VE L F AG+L YR F+W+EKQ Y +++ AY +++S + R+Y+L+W++ Sbjct: 62 VSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYE-HSVRAYHMMIESTAKIRQYKLMWDL 120 Query: 459 VDEMKKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCR 638 ++ M+K +L ETF ++ + ARA++ DEA+ FN ME KY ++ C+ Sbjct: 121 INAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVME-KYDLPPNLVAFNGLLSALCK 179 Query: 639 RRFPRTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDT 818 + R A+E+ + +R R PD ++Y ILLEGW P LP +FR++ G D Sbjct: 180 SKNVRKAQEVFENMRDR---FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDI 236 Query: 819 GVYGIYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKG 995 Y I + L + G+ + AL R M KP ++IYS+++ + +++ A+ + Sbjct: 237 VTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLE 296 Query: 996 MKNSGFLLDIDGCNALVGAFCSSGRFSDAYELLETEKA---VPNARTHNLIFDSMLRYKE 1166 M+ SG D+ N+L+GAFC + R + Y +L+ K+ PN+++ N+I ++ E Sbjct: 297 MERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGE 356 Query: 1167 KDHVVSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCI 1346 KD F K+ E D + Y ++++ F ++ +W+ M K P+ + + Sbjct: 357 KDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSV 415 Query: 1347 MVNAFLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 ++N +++ T+KA EEM+ GIRP TF RLR+ L+K+E+ ++L +L+ KM L Sbjct: 416 LINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMNVL 474 >ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor] gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor] Length = 551 Score = 235 bits (599), Expect = 4e-59 Identities = 124/415 (29%), Positives = 235/415 (56%), Gaps = 4/415 (0%) Frame = +3 Query: 291 LVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEVVDEM 470 LV + LK AGML FRWAE+Q G+ + T + +++++L + ++++LVW +V+ M Sbjct: 133 LVAEVLKNLSNAGMLALAFFRWAERQEGFSY-TAEGFHNLIEALGKIKQFKLVWSLVETM 191 Query: 471 KKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCRRRFP 650 + G+L ++TF I+ R ARAR+ EAVE F M +G ++ + + Sbjct: 192 RCRGLLSKDTFKLIVRRYARARKVKEAVETFEKMSI-FGLKTELSDYNWLIDTLSKSKQV 250 Query: 651 RTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDTGVYG 830 + A+ + + + KRK PDL++Y +L+EGW L V+ +++++ G D YG Sbjct: 251 KKAQAIYKEM-KRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYG 309 Query: 831 IYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKGMKNS 1007 + I A + GK + A+ F EM+ G P ++Y M+I GL + ++D AL ++ K S Sbjct: 310 MLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQYKKS 369 Query: 1008 GFLLDIDGCNALVGAFCSSGRFSDAYELLETE---KAVPNARTHNLIFDSMLRYKEKDHV 1178 GF +++ CNA+VGA+C + +F A+++++ K PN+RT+++I +++ ++ + Sbjct: 370 GFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKSQKFEEA 429 Query: 1179 VSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCIMVNA 1358 + F+++ G E N Y +++ F ++G +D +W+ M + P + ++N Sbjct: 430 YNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQMGERGVLPCMHMFSALING 489 Query: 1359 FLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 + E+A YF+EML+KGIRP + F L++ L++ +++L ++ K++A+ Sbjct: 490 LCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRISLAQEMASKLDAI 544 >ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g77360, mitochondrial; Flags: Precursor gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 517 Score = 235 bits (599), Expect = 4e-59 Identities = 132/419 (31%), Positives = 229/419 (54%), Gaps = 4/419 (0%) Frame = +3 Query: 279 VPNTLVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEV 458 V +VE L F AG+L YR F+W+EKQ Y +++ AY +++S + R+Y+L+W++ Sbjct: 98 VSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYE-HSVRAYHMMIESTAKIRQYKLMWDL 156 Query: 459 VDEMKKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCR 638 ++ M+K +L ETF ++ + ARA++ DEA+ FN ME KY ++ C+ Sbjct: 157 INAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVME-KYDLPPNLVAFNGLLSALCK 215 Query: 639 RRFPRTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDT 818 + R A+E+ + +R R PD ++Y ILLEGW P LP +FR++ G D Sbjct: 216 SKNVRKAQEVFENMRDR---FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDI 272 Query: 819 GVYGIYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKG 995 Y I + L + G+ + AL R M KP ++IYS+++ + +++ A+ + Sbjct: 273 VTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLE 332 Query: 996 MKNSGFLLDIDGCNALVGAFCSSGRFSDAYELLETEKA---VPNARTHNLIFDSMLRYKE 1166 M+ SG D+ N+L+GAFC + R + Y +L+ K+ PN+++ N+I ++ E Sbjct: 333 MERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGE 392 Query: 1167 KDHVVSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCI 1346 KD F K+ E D + Y ++++ F ++ +W+ M K P+ + + Sbjct: 393 KDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSV 451 Query: 1347 MVNAFLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 ++N +++ T+KA EEM+ GIRP TF RLR+ L+K+E+ ++L +L+ KM L Sbjct: 452 LINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMNVL 510 >ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays] gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays] gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays] Length = 489 Score = 234 bits (597), Expect = 8e-59 Identities = 131/418 (31%), Positives = 231/418 (55%), Gaps = 5/418 (1%) Frame = +3 Query: 291 LVEQTLKTFDKAGMLGYRLFRWAEKQP-GYGFNTLAAYESIVDSLTRDRRYRLVWEVVDE 467 + E LK D AGML YR F WA KQ G +T+ +Y ++V SL + R+Y+L+W+VV Sbjct: 72 IAESVLKHLDNAGMLAYRFFEWARKQKRGVCAHTVRSYHTVVTSLAKIRQYQLMWDVVAI 131 Query: 468 MKKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCRRRF 647 M+K G+ ETF I+ + ARA++ DEAV FN ME KYG + ++ C+ + Sbjct: 132 MRKEGVANVETFGIIMRKYARAQKLDEAVYTFNVME-KYGVAHNLAAFNSLLSALCKSKN 190 Query: 648 PRTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDTGVY 827 R A+E+ + R PD ++Y ILLEGW P LP + ++ + + G + D Y Sbjct: 191 VRKAQEIFDKMNNR---FSPDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTY 247 Query: 828 GIYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKGMKN 1004 GI + AL + G+ A+ ++M +G +P ++IYS+++ V +++ A++ + M+ Sbjct: 248 GIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEK 307 Query: 1005 SGFLLDIDGCNALVGAFCSSGRFSDAYELLETEKA---VPNARTHNLIFDSMLRYKEKDH 1175 G + D+ NAL+ AFC +F +A+ +++ + PN+RT N+I ++++ + D Sbjct: 308 DGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNIILNTLISLGKDDE 367 Query: 1176 VVSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCIMVN 1355 F + + D + Y ++++ F + ++ +W+ M K+ P+ + +++N Sbjct: 368 AYRVFRSMIKRC-KPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLIN 426 Query: 1356 AFLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEALGE 1529 DK +A E+M+ KGIRP TF +LR+ LLK+ + ++L +L KM+ L + Sbjct: 427 GLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKMKILAQ 484 >ref|XP_006301167.1| hypothetical protein CARUB_v10021564mg, partial [Capsella rubella] gi|482569877|gb|EOA34065.1| hypothetical protein CARUB_v10021564mg, partial [Capsella rubella] Length = 486 Score = 233 bits (595), Expect = 1e-58 Identities = 132/419 (31%), Positives = 226/419 (53%), Gaps = 4/419 (0%) Frame = +3 Query: 279 VPNTLVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEV 458 V +VE L F AG+L YR F+W+EKQ Y +++ AY +++S + R+Y+L+W++ Sbjct: 67 VSQEVVEDVLNRFRNAGLLAYRFFQWSEKQRHYE-HSVRAYHMMIESTAKIRQYKLMWDL 125 Query: 459 VDEMKKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCR 638 ++ M+K +L ETF ++ + ARA++ DEA+ FN ME KY ++ C+ Sbjct: 126 INSMRKKKMLNIETFCIVMRKYARAQKVDEAIYAFNVME-KYDLPPNLVAFNGLLSALCK 184 Query: 639 RRFPRTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDT 818 + R A+E+ + +R R P ++Y ILLEGW P LP +FR++ G D Sbjct: 185 SKNVRKAQEIFENMRDR---FTPSSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDI 241 Query: 819 GVYGIYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKG 995 Y I + L + G+ + AL R M KP ++IYS+++ + +++ A+ + Sbjct: 242 VTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLE 301 Query: 996 MKNSGFLLDIDGCNALVGAFCSSGRFSDAYELLETEK---AVPNARTHNLIFDSMLRYKE 1166 M+ SG D+ N+L+GAFC + R + Y +L+ K PN+++ N+I ++ E Sbjct: 302 MERSGMKADVAIFNSLIGAFCKANRMKNVYRVLKEMKNKGVTPNSKSCNIILRHLIDRGE 361 Query: 1167 KDHVVSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCI 1346 D F K+ E D + Y ++++ F ++ +W+ M K P+ + + Sbjct: 362 TDEAFDVFRKMIKVC-EPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFAV 420 Query: 1347 MVNAFLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 ++N D+ NT+KA EEM+ GIRP TF RLR+ LLK+++ ++L +L+ KM L Sbjct: 421 LINGLCDQHNTQKACVLLEEMIEMGIRPSGVTFGRLRQLLLKEDREDVLKFLNEKMNVL 479 >ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucumis sativus] gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucumis sativus] Length = 439 Score = 233 bits (595), Expect = 1e-58 Identities = 134/415 (32%), Positives = 225/415 (54%), Gaps = 4/415 (0%) Frame = +3 Query: 291 LVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEVVDEM 470 + E L+ F+ AGML YR F WA KQ Y +++ AY S+++SL + R+Y++VW++V+ M Sbjct: 24 IAEPVLRRFENAGMLAYRFFEWASKQRNY-VHSVRAYHSMIESLAKIRQYQMVWDLVNAM 82 Query: 471 KKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCRRRFP 650 + IL E F I+ + ARA++ +EAV FN ME KY ++ C+ + Sbjct: 83 RNKEILNVEAFCIIMRKYARAQKVEEAVYTFNVME-KYNMKPNVAAFNGLLSALCKSKNV 141 Query: 651 RTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDTGVYG 830 R A+E+ + K+ PD ++Y IL+EGW P LP I+R++ G D Y Sbjct: 142 RKAQEIFDNM---KDQFVPDSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYS 198 Query: 831 IYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKGMKNS 1007 I + L + G+ + A++ +EM KP S+IYS+++ V+ +++ A+S + M+ + Sbjct: 199 IMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERN 258 Query: 1008 GFLLDIDGCNALVGAFCSSGRFSDAYELL---ETEKAVPNARTHNLIFDSMLRYKEKDHV 1178 G + D+ NAL+ AFC + + + Y +L + + PN+RT N+I +S++ E D Sbjct: 259 GVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEA 318 Query: 1179 VSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCIMVNA 1358 F ++ E D + Y ++++ F LD IW+ M K+ P+ + +++N Sbjct: 319 FKIFRRMIKVC-EPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLING 377 Query: 1359 FLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 N +A EEM+ KGIRP TF RLR L+K+ + ++L +L KM L Sbjct: 378 LCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEGRKDVLKFLQEKMNLL 432 >ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Vitis vinifera] Length = 476 Score = 233 bits (594), Expect = 2e-58 Identities = 133/415 (32%), Positives = 231/415 (55%), Gaps = 4/415 (0%) Frame = +3 Query: 291 LVEQTLKTFDKAGMLGYRLFRWAEKQPGYGFNTLAAYESIVDSLTRDRRYRLVWEVVDEM 470 +VE LK F+ AGML Y+ F WA KQ Y +++ AY ++++SL + R+Y+++W++V++M Sbjct: 45 VVENVLKRFENAGMLAYQFFEWAGKQRNYT-HSIRAYHTMIESLAKIRQYQIMWDLVNKM 103 Query: 471 KKLGILRRETFHFIIYRLARARRCDEAVEVFNDMEDKYGFSKDIKXXXXXXXXXCRRRFP 650 + L IL ETF I+ + AR+++ EAV FN ME KY ++ C+ + Sbjct: 104 RSLKILNVETFCIIMRKYARSQKVKEAVYTFNIME-KYDVPPNLAAFNSLLSALCKSKNV 162 Query: 651 RTAEELVQGLRKRKEGVQPDLESYRILLEGWAGIPCLPAVEVIFRKLPSMGFELDTGVYG 830 A+E+ G+ K+ PD ++Y ILLEGW P LP IFR++ MG + D YG Sbjct: 163 VKAQEIFNGM---KDQFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYG 219 Query: 831 IYIRALIEGGKANLALDKFREMQDKGPKPDSYIYSMMIQGL-VKTQVDLALSLYKGMKNS 1007 I + L + G+ + A+ +EM KP S+IYS+++ ++ +++ A+ + M+ + Sbjct: 220 IMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERN 279 Query: 1008 GFLLDIDGCNALVGAFCSSGRFSDAYELL---ETEKAVPNARTHNLIFDSMLRYKEKDHV 1178 D+ NAL+GAFC + +AY +L + + PN+RT N+I +S++ + D Sbjct: 280 EIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEA 339 Query: 1179 VSEFEKVAHSGGELDENVYLLLMRSFWADGNLDKLSTIWQLMLSKKACPTAVGYCIMVNA 1358 F ++ + D + Y ++++ F + L+ +W+ M K+ P+ + +++N Sbjct: 340 FRVFRRMI-KVCDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLING 398 Query: 1359 FLDKKNTEKASGYFEEMLNKGIRPEHKTFDRLRKNLLKDEKVNLLGYLSRKMEAL 1523 K N KA EEM+ KGIRP TF +L++ L+K+ + ++L +L KM L Sbjct: 399 LCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGREDVLEFLQEKMNLL 453