BLASTX nr result

ID: Ephedra28_contig00019388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00019388
         (387 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76292.1| unknown [Picea sitchensis]                              82   6e-14
gb|ABK24685.1| unknown [Picea sitchensis]                              70   3e-10

>gb|ADE76292.1| unknown [Picea sitchensis]
          Length = 633

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 45/109 (41%), Positives = 60/109 (55%)
 Frame = +3

Query: 6   MESLLPYWQRKMMHNNDGMRSSGDVSDDVDMEEAMPVKMESFVRTIMQHCTAVANYTSSA 185
           +E+LLPY +R M    D M S+     D  MEEA+P  +  FV T++QHC+AV NY+S+A
Sbjct: 216 LEALLPYLKRSMQSAGDSMGST-----DTPMEEALPEGIAEFVGTVIQHCSAVVNYSSAA 270

Query: 186 NMCPKHXXXXXXXXXXXXXXXXXFGHYVFCTSTNNGIGGGIWLENHEAI 332
            M P +                 FGHYVFC+ T     GGI +ENH A+
Sbjct: 271 KMSPNNPSIAVVKSLVKLSPYRPFGHYVFCSRT-----GGISIENHFAV 314


>gb|ABK24685.1| unknown [Picea sitchensis]
          Length = 650

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 41/109 (37%), Positives = 57/109 (52%)
 Frame = +3

Query: 6   MESLLPYWQRKMMHNNDGMRSSGDVSDDVDMEEAMPVKMESFVRTIMQHCTAVANYTSSA 185
           +ESLLPY +R   +  D + S+     D  MEEA+P      V T++QH +A+ANY+S+ 
Sbjct: 219 LESLLPYLKRYPENVGDLLGST-----DTTMEEALPEGSAELVSTVLQHSSAIANYSSAT 273

Query: 186 NMCPKHXXXXXXXXXXXXXXXXXFGHYVFCTSTNNGIGGGIWLENHEAI 332
           NM P +                 FGHYVFC+ +     GGI  ENH A+
Sbjct: 274 NMSPNNPLMAAVKSLVKLSPYRPFGHYVFCSRS-----GGIRTENHFAV 317


Top