BLASTX nr result
ID: Ephedra28_contig00019339
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00019339
(494 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, I... 75 1e-11
gb|EMJ27037.1| hypothetical protein PRUPE_ppa014395mg [Prunus pe... 73 3e-11
sp|Q39290.1|RPAB5_BRANA RecName: Full=DNA-directed RNA polymeras... 72 6e-11
gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK221... 72 8e-11
ref|NP_176363.1| DNA-directed RNA polymerase subunit 10-like pro... 72 1e-10
ref|XP_006417353.1| hypothetical protein EUTSA_v10009269mg [Eutr... 72 1e-10
ref|NP_849640.1| DNA-directed RNA polymerases II, IV and V subun... 72 1e-10
ref|XP_006662796.1| PREDICTED: DNA-directed RNA polymerase subun... 71 1e-10
ref|XP_006483895.1| PREDICTED: DNA-directed RNA polymerase subun... 71 1e-10
ref|XP_004138685.1| PREDICTED: DNA-directed RNA polymerases I, I... 71 1e-10
gb|AFK37774.1| unknown [Lotus japonicus] gi|388514409|gb|AFK4526... 71 1e-10
ref|XP_003522765.1| PREDICTED: DNA-directed RNA polymerase subun... 71 1e-10
ref|XP_003517695.1| PREDICTED: uncharacterized LOC100527000 [Gly... 71 1e-10
ref|XP_006391977.1| hypothetical protein EUTSA_v10023792mg [Eutr... 71 2e-10
ref|XP_002303467.2| DNA-directed RNA polymerase II 8.2 kDa polyp... 71 2e-10
gb|EOY00528.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao] 71 2e-10
ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, I... 71 2e-10
ref|XP_001769186.1| predicted protein [Physcomitrella patens] gi... 71 2e-10
ref|XP_002326311.1| predicted protein [Populus trichocarpa] gi|5... 71 2e-10
gb|EPS58145.1| hypothetical protein M569_16671 [Genlisea aurea] 70 2e-10
>ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Fragaria vesca subsp. vesca]
Length = 71
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSDN 390
DALGLVRYCCRRMLMTHVDLIEKLLNYNTLE+SDN
Sbjct: 36 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSDN 70
>gb|EMJ27037.1| hypothetical protein PRUPE_ppa014395mg [Prunus persica]
Length = 71
Score = 73.2 bits (178), Expect = 3e-11
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSDN 390
DALGLVRYCCRRMLMTHVDLIEKLLNYNTLE+S+N
Sbjct: 36 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEN 70
>sp|Q39290.1|RPAB5_BRANA RecName: Full=DNA-directed RNA polymerases I, II, and III subunit
RPABC5; Short=RNA polymerases I, II, and III subunit
ABC5; AltName: Full=ABC10; AltName: Full=DNA-directed
RNA polymerase III subunit L; AltName: Full=RPB10
homolog gi|533690|gb|AAA21279.1| RNA polymerase II
subunit RPB10 homolog; similar to yeast RNA polymerase
II subunit RPB10, Swiss-Prot Accession Number P22139
[Brassica napus]
Length = 71
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSDN 390
DAL LVRYCCRRMLMTHVDLIEKLLNYNTLE+SDN
Sbjct: 36 DALNLVRYCCRRMLMTHVDLIEKLLNYNTLEKSDN 70
>gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK22149.1| unknown
[Picea sitchensis] gi|116789545|gb|ABK25286.1| unknown
[Picea sitchensis]
Length = 71
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSD 393
DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERS+
Sbjct: 36 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSE 69
>ref|NP_176363.1| DNA-directed RNA polymerase subunit 10-like protein [Arabidopsis
thaliana] gi|297840381|ref|XP_002888072.1| predicted
protein [Arabidopsis lyrata subsp. lyrata]
gi|565487951|ref|XP_006301615.1| hypothetical protein
CARUB_v10022056mg [Capsella rubella]
gi|11134747|sp|Q9SYA6.1|RPBAL_ARATH RecName:
Full=DNA-directed RNA polymerase subunit 10-like
protein; AltName: Full=ABC10; AltName: Full=DNA-directed
RNA polymerase III subunit L; AltName: Full=DNA-directed
RNA polymerases I, II, and III subunit RPABC5; Short=RNA
polymerases I, II, and III subunit ABC5; AltName:
Full=RPB10 homolog gi|4508082|gb|AAD21426.1| Putative
RNA polymerase II subunit Rpb10 [Arabidopsis thaliana]
gi|297333913|gb|EFH64331.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
gi|332195756|gb|AEE33877.1| DNA-directed RNA polymerases
II-like protein of unknown function [Arabidopsis
thaliana] gi|482570325|gb|EOA34513.1| hypothetical
protein CARUB_v10022056mg [Capsella rubella]
Length = 71
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSD 393
DALGLVRYCCRRMLMTHVDLIEKLLNYNT+E+SD
Sbjct: 36 DALGLVRYCCRRMLMTHVDLIEKLLNYNTMEKSD 69
>ref|XP_006417353.1| hypothetical protein EUTSA_v10009269mg [Eutrema salsugineum]
gi|557095124|gb|ESQ35706.1| hypothetical protein
EUTSA_v10009269mg [Eutrema salsugineum]
Length = 71
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSDN 390
DAL LVRYCCRRMLMTHVDLIEKLLNYNTLE+SDN
Sbjct: 36 DALQLVRYCCRRMLMTHVDLIEKLLNYNTLEKSDN 70
>ref|NP_849640.1| DNA-directed RNA polymerases II, IV and V subunit 10 [Arabidopsis
thaliana] gi|297843980|ref|XP_002889871.1| hypothetical
protein ARALYDRAFT_471284 [Arabidopsis lyrata subsp.
lyrata] gi|565468954|ref|XP_006292280.1| hypothetical
protein CARUB_v10018490mg [Capsella rubella]
gi|565491696|ref|XP_006303487.1| hypothetical protein
CARUB_v10010812mg [Capsella rubella]
gi|75155887|sp|Q8LFJ6.1|NRPBA_ARATH RecName:
Full=DNA-directed RNA polymerases II, IV and V subunit
10; AltName: Full=DNA-directed RNA Polymerase II subunit
L gi|21537033|gb|AAM61374.1| RNA polymerase II subunit
(hsRPB10), putative [Arabidopsis thaliana]
gi|26451764|dbj|BAC42977.1| putative RNA polymerase II
subunit hsRPB10 [Arabidopsis thaliana]
gi|94807650|gb|ABF47122.1| At1g11475 [Arabidopsis
thaliana] gi|110736743|dbj|BAF00334.1| hypothetical
protein [Arabidopsis thaliana]
gi|297335713|gb|EFH66130.1| hypothetical protein
ARALYDRAFT_471284 [Arabidopsis lyrata subsp. lyrata]
gi|332190620|gb|AEE28741.1| DNA-directed RNA polymerase
subunit NRPB10\NRPD10\NRPE10 [Arabidopsis thaliana]
gi|482560987|gb|EOA25178.1| hypothetical protein
CARUB_v10018490mg [Capsella rubella]
gi|482572198|gb|EOA36385.1| hypothetical protein
CARUB_v10010812mg [Capsella rubella]
Length = 71
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSDN 390
DAL LVRYCCRRMLMTHVDLIEKLLNYNTLE+SDN
Sbjct: 36 DALQLVRYCCRRMLMTHVDLIEKLLNYNTLEKSDN 70
>ref|XP_006662796.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
[Oryza brachyantha]
Length = 74
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSD 393
DALGLVRYCCRRMLMTHVDLIEKLLNYNTLE++D
Sbjct: 36 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKTD 69
>ref|XP_006483895.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
[Citrus sinensis]
Length = 71
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSD 393
DALGLVRYCCRRMLMTHVDLIEKLLNYNTL++SD
Sbjct: 36 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLDKSD 69
>ref|XP_004138685.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Cucumis sativus]
gi|449522728|ref|XP_004168378.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC5-like
[Cucumis sativus]
Length = 71
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSD 393
DALGLVRYCCRRMLMTHVDLIEKLLNYNTL++SD
Sbjct: 36 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLDKSD 69
>gb|AFK37774.1| unknown [Lotus japonicus] gi|388514409|gb|AFK45266.1| unknown
[Lotus japonicus]
Length = 71
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSD 393
DALGLVRYCCRRMLMTHVDLIEKLLNYNTL++SD
Sbjct: 36 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLDKSD 69
>ref|XP_003522765.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
isoform X1 [Glycine max]
gi|571449916|ref|XP_006578279.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein-like isoform X2
[Glycine max] gi|571449919|ref|XP_006578280.1|
PREDICTED: DNA-directed RNA polymerase subunit 10-like
protein-like isoform X3 [Glycine max]
gi|571449921|ref|XP_006578281.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein-like isoform X4
[Glycine max]
Length = 71
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSD 393
DALGLVRYCCRRMLMTHVDLIEKLLNYNTL++SD
Sbjct: 36 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLDKSD 69
>ref|XP_003517695.1| PREDICTED: uncharacterized LOC100527000 [Glycine max]
gi|356502404|ref|XP_003520009.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein-like [Glycine
max] gi|255631340|gb|ACU16037.1| unknown [Glycine max]
Length = 71
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSD 393
DALGLVRYCCRRMLMTHVDLIEKLLNYNTL++SD
Sbjct: 36 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLDKSD 69
>ref|XP_006391977.1| hypothetical protein EUTSA_v10023792mg [Eutrema salsugineum]
gi|557088483|gb|ESQ29263.1| hypothetical protein
EUTSA_v10023792mg [Eutrema salsugineum]
Length = 71
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSD 393
DA+GLVRYCCRRMLMTHVDLIEKLLNYNT+E+SD
Sbjct: 36 DAIGLVRYCCRRMLMTHVDLIEKLLNYNTMEKSD 69
>ref|XP_002303467.2| DNA-directed RNA polymerase II 8.2 kDa polypeptide family protein
[Populus trichocarpa] gi|550342885|gb|EEE78446.2|
DNA-directed RNA polymerase II 8.2 kDa polypeptide
family protein [Populus trichocarpa]
Length = 74
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSD 393
DALGLVRYCCRRMLMTHVDLIEKLLNYNTLE+S+
Sbjct: 39 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 72
>gb|EOY00528.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao]
Length = 113
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSD 393
DALGLVRYCCRRMLMTHVDLIEKLLNYNTLE+S+
Sbjct: 78 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 111
>ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Vitis vinifera] gi|297739069|emb|CBI28558.3|
unnamed protein product [Vitis vinifera]
gi|508787490|gb|EOY34746.1| RNA polymerases N / 8 kDa
subunit [Theobroma cacao]
Length = 71
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSD 393
DALGLVRYCCRRMLMTHVDLIEKLLNYNTLE+S+
Sbjct: 36 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 69
>ref|XP_001769186.1| predicted protein [Physcomitrella patens]
gi|162679612|gb|EDQ66058.1| predicted protein
[Physcomitrella patens]
Length = 73
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/35 (91%), Positives = 34/35 (97%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSDN 390
DAL LVRYCCRRMLMTHVDLIEKLLNYNTLER++N
Sbjct: 36 DALALVRYCCRRMLMTHVDLIEKLLNYNTLERNEN 70
>ref|XP_002326311.1| predicted protein [Populus trichocarpa]
gi|566176261|ref|XP_006381558.1| hypothetical protein
POPTR_0006s13850g [Populus trichocarpa]
gi|118486243|gb|ABK94963.1| unknown [Populus
trichocarpa] gi|550336264|gb|ERP59355.1| hypothetical
protein POPTR_0006s13850g [Populus trichocarpa]
Length = 71
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSD 393
DALGLVRYCCRRMLMTHVDLIEKLLNYNTLE+S+
Sbjct: 36 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 69
>gb|EPS58145.1| hypothetical protein M569_16671 [Genlisea aurea]
Length = 71
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/35 (91%), Positives = 34/35 (97%)
Frame = -1
Query: 494 DALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSDN 390
DAL LVRYCCRRMLMTHVDLIEKLLNYNTLE+SD+
Sbjct: 36 DALSLVRYCCRRMLMTHVDLIEKLLNYNTLEKSDS 70