BLASTX nr result
ID: Ephedra28_contig00019338
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00019338
(355 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY08734.1| Transcription elongation factor family protein, p... 68 1e-09
ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250... 67 2e-09
ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Popu... 66 4e-09
ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Popu... 66 4e-09
ref|XP_002308874.2| transcription elongation factor-related fami... 65 7e-09
gb|EMJ03252.1| hypothetical protein PRUPE_ppa005771mg [Prunus pe... 65 9e-09
ref|XP_002517284.1| conserved hypothetical protein [Ricinus comm... 65 1e-08
ref|XP_006836259.1| hypothetical protein AMTR_s00101p00137160 [A... 64 2e-08
ref|XP_004303850.1| PREDICTED: probable mediator of RNA polymera... 62 6e-08
gb|ESW34052.1| hypothetical protein PHAVU_001G120200g [Phaseolus... 61 1e-07
gb|AFK48326.1| unknown [Medicago truncatula] 61 1e-07
ref|XP_003624930.1| hypothetical protein MTR_7g089140 [Medicago ... 61 1e-07
ref|XP_003624929.1| hypothetical protein MTR_7g089140 [Medicago ... 61 1e-07
ref|XP_003624928.1| hypothetical protein MTR_7g089140 [Medicago ... 61 1e-07
ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymera... 60 2e-07
ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citr... 60 2e-07
gb|EPS59822.1| hypothetical protein M569_14982 [Genlisea aurea] 60 3e-07
ref|XP_006604318.1| PREDICTED: probable mediator of RNA polymera... 60 4e-07
ref|XP_006575124.1| PREDICTED: probable mediator of RNA polymera... 59 7e-07
gb|ACU24154.1| unknown [Glycine max] 59 7e-07
>gb|EOY08734.1| Transcription elongation factor family protein, putative isoform 1
[Theobroma cacao]
Length = 464
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R +F+TA +DI +I++AI VA DCPK RD+IA++LF+ F RC GC V P
Sbjct: 12 RDYFRTANSDIFDIIDHAITVAALDCPKEFRLRRDQIAEKLFTCKFTRCSGCDRVKLVVP 71
Query: 181 EF-RDKENGVRA 213
E+ D G RA
Sbjct: 72 EYGADNGRGCRA 83
>ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250012 [Vitis vinifera]
Length = 521
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R +F+TA +DI +IE+AILVA +DCPK RDRIA+RLFS RC GC P
Sbjct: 12 RNYFRTANSDIFGIIEHAILVAASDCPKEFRLRRDRIAERLFSCKLTRCFGCDRVELAVP 71
Query: 181 E 183
E
Sbjct: 72 E 72
>ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
gi|550320725|gb|EEF04988.2| hypothetical protein
POPTR_0016s03310g [Populus trichocarpa]
Length = 480
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/70 (45%), Positives = 42/70 (60%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R +F+TA +DI +I++AILVA +DCPK RDRIA+RLFS I+C GC P
Sbjct: 10 RDYFRTASSDIFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIKCSGCNQVELAVP 69
Query: 181 EFRDKENGVR 210
+ E R
Sbjct: 70 GHDEDERDDR 79
>ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
gi|222867860|gb|EEF04991.1| hypothetical protein
POPTR_0016s03310g [Populus trichocarpa]
Length = 474
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/70 (45%), Positives = 42/70 (60%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R +F+TA +DI +I++AILVA +DCPK RDRIA+RLFS I+C GC P
Sbjct: 10 RDYFRTASSDIFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIKCSGCNQVELAVP 69
Query: 181 EFRDKENGVR 210
+ E R
Sbjct: 70 GHDEDERDDR 79
>ref|XP_002308874.2| transcription elongation factor-related family protein [Populus
trichocarpa] gi|550335369|gb|EEE92397.2| transcription
elongation factor-related family protein [Populus
trichocarpa]
Length = 483
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/60 (50%), Positives = 39/60 (65%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R +F+TA +DI +I++AILVA +DCPK RDRIA+RLFS I+C GC P
Sbjct: 10 RNYFRTASSDIFGIIDHAILVAASDCPKEFKFRRDRIAERLFSCRLIKCSGCNRVELAVP 69
>gb|EMJ03252.1| hypothetical protein PRUPE_ppa005771mg [Prunus persica]
Length = 444
Score = 65.1 bits (157), Expect = 9e-09
Identities = 29/60 (48%), Positives = 38/60 (63%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R +F+TA +DI +I++AI+VA +DCPK RDRIA+RLFS RC GC P
Sbjct: 12 RNYFRTANSDIFDIIDHAIMVAASDCPKEFKLRRDRIAERLFSCRLTRCSGCDKMELAVP 71
>ref|XP_002517284.1| conserved hypothetical protein [Ricinus communis]
gi|223543547|gb|EEF45077.1| conserved hypothetical
protein [Ricinus communis]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/60 (48%), Positives = 39/60 (65%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R +F+TA +DI +I++AI+VA +DCPK RDRIA+RLFS RC GC + P
Sbjct: 10 RNYFRTANSDIFAIIDHAIMVAASDCPKEFRLRRDRIAERLFSCRLTRCSGCNHVDLAVP 69
>ref|XP_006836259.1| hypothetical protein AMTR_s00101p00137160 [Amborella trichopoda]
gi|548838759|gb|ERM99112.1| hypothetical protein
AMTR_s00101p00137160 [Amborella trichopoda]
Length = 454
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/68 (45%), Positives = 44/68 (64%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R+FF+ AG+DI +VIE AI +A +DCPK RD+IA+RL++ IRCG C P
Sbjct: 10 REFFREAGSDIFSVIEYAITIAASDCPKEFRLRRDKIAERLYACKLIRCGECDNVTVAMP 69
Query: 181 EFRDKENG 204
++E+G
Sbjct: 70 G-EERESG 76
>ref|XP_004303850.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like [Fragaria vesca subsp. vesca]
Length = 458
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/60 (46%), Positives = 38/60 (63%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R +F+TA +DI +I++AI+VA DCPK RDR+A+ LFS RC GC+ V P
Sbjct: 18 RSYFRTANSDIFGIIDHAIMVAAVDCPKEFRLRRDRVAELLFSCRMSRCSGCEKVELVVP 77
>gb|ESW34052.1| hypothetical protein PHAVU_001G120200g [Phaseolus vulgaris]
gi|561035523|gb|ESW34053.1| hypothetical protein
PHAVU_001G120200g [Phaseolus vulgaris]
gi|561035524|gb|ESW34054.1| hypothetical protein
PHAVU_001G120200g [Phaseolus vulgaris]
Length = 450
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGC 156
R++F ++ +DI +IENAI+VA +DCPK RD IA+RLF S RC GC
Sbjct: 28 REYFVSSKSDIFEIIENAIIVAASDCPKEFRVRRDTIAERLFCSSLTRCAGC 79
>gb|AFK48326.1| unknown [Medicago truncatula]
Length = 451
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R +F+++ +DI +I++AI+VA +DCPK RD IA+RLFS RC GC+ VE
Sbjct: 13 RSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKGCEK---VEL 69
Query: 181 EFRDKENG 204
D +NG
Sbjct: 70 SVPDDDNG 77
>ref|XP_003624930.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499945|gb|AES81148.1| hypothetical protein
MTR_7g089140 [Medicago truncatula]
Length = 444
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R +F+++ +DI +I++AI+VA +DCPK RD IA+RLFS RC GC+ VE
Sbjct: 10 RSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKGCEK---VEL 66
Query: 181 EFRDKENG 204
D +NG
Sbjct: 67 SVPDDDNG 74
>ref|XP_003624929.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499944|gb|AES81147.1| hypothetical protein
MTR_7g089140 [Medicago truncatula]
Length = 467
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R +F+++ +DI +I++AI+VA +DCPK RD IA+RLFS RC GC+ VE
Sbjct: 13 RSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKGCEK---VEL 69
Query: 181 EFRDKENG 204
D +NG
Sbjct: 70 SVPDDDNG 77
>ref|XP_003624928.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499943|gb|AES81146.1| hypothetical protein
MTR_7g089140 [Medicago truncatula]
Length = 447
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R +F+++ +DI +I++AI+VA +DCPK RD IA+RLFS RC GC+ VE
Sbjct: 13 RSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKGCEK---VEL 69
Query: 181 EFRDKENG 204
D +NG
Sbjct: 70 SVPDDDNG 77
>ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like [Citrus sinensis]
Length = 448
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R +F++A DI +I++A++VA DCPK RDRIA++LF+ RC GC P
Sbjct: 12 RNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRVELAVP 71
Query: 181 ---EFRDKE 198
EF D E
Sbjct: 72 SGNEFDDDE 80
>ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citrus clementina]
gi|557532580|gb|ESR43763.1| hypothetical protein
CICLE_v10011717mg [Citrus clementina]
Length = 448
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R +F++A DI +I++A++VA DCPK RDRIA++LF+ RC GC P
Sbjct: 12 RNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRVELAVP 71
Query: 181 ---EFRDKE 198
EF D E
Sbjct: 72 SGNEFDDDE 80
>gb|EPS59822.1| hypothetical protein M569_14982 [Genlisea aurea]
Length = 396
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGC 156
R +F+TA +DI +IE+A++VA +DCP RDRIA+ LFS I+C GC
Sbjct: 12 RAYFRTANSDIFDIIEHAVMVAASDCPYEFKSRRDRIAELLFSCKSIKCSGC 63
>ref|XP_006604318.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X1 [Glycine max]
gi|571556809|ref|XP_006604319.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X2 [Glycine max]
Length = 458
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGC-QAQNFVE 177
R++F +A +DI +IE+AI+VA +DCPK RD IA+RLFS RC GC + + V
Sbjct: 10 RKYFGSANSDIFEIIEHAIIVAASDCPKEFRVRRDGIAERLFSCRLTRCVGCDRVELAVG 69
Query: 178 PEFRDKENG 204
+ ++K +G
Sbjct: 70 ADSKEKHDG 78
>ref|XP_006575124.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X1 [Glycine max]
gi|571440343|ref|XP_006575125.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X2 [Glycine max]
Length = 453
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R +F A +DI +I++AI+VA +DCPK RD IA+RLFS RC GC+ P
Sbjct: 12 RNYFGAANSDIFGIIDHAIMVAASDCPKEFRLRRDGIAERLFSCRLSRCLGCERVELAVP 71
Query: 181 EFRDKENG 204
D + G
Sbjct: 72 VDDDDDGG 79
>gb|ACU24154.1| unknown [Glycine max]
Length = 336
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +1
Query: 1 RQFFKTAGTDICTVIENAILVAQTDCPKALNENRDRIAQRLFSPSFIRCGGCQAQNFVEP 180
R +F A +DI +I++AI+VA +DCPK RD IA+RLFS RC GC+ P
Sbjct: 12 RNYFGAANSDIFGIIDHAIMVAASDCPKEFTLRRDGIAERLFSCRLSRCLGCERVELAVP 71
Query: 181 EFRDKENG 204
D + G
Sbjct: 72 VDDDDDGG 79