BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00019260
         (413 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187008.1| pentatricopeptide repeat-containing protein [Ar...    86   7e-15
gb|EXB65293.1| hypothetical protein L484_025372 [Morus notabilis]      84   1e-14
gb|EMJ22183.1| hypothetical protein PRUPE_ppa002467mg [Prunus pe...    84   3e-14
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
ref|XP_006296957.1| hypothetical protein CARUB_v10012948mg [Caps...    81   2e-13
ref|XP_002884396.1| pentatricopeptide repeat-containing protein ...    80   2e-13
gb|AFG66680.1| hypothetical protein 0_14992_02, partial [Pinus t...    80   4e-13
gb|EMJ22213.1| hypothetical protein PRUPE_ppa023643mg, partial [...    79   5e-13
ref|XP_004237761.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containi...    79   6e-13
ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245...    79   8e-13
emb|CBI34885.3| unnamed protein product [Vitis vinifera]               79   8e-13
emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]    79   8e-13
ref|XP_006356287.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
gb|AHB18407.1| pentatricopeptide repeat-containing protein [Goss...    78   1e-12
ref|XP_004289272.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|XP_002881665.1| pentatricopeptide repeat-containing protein ...    78   1e-12
ref|XP_006408289.1| hypothetical protein EUTSA_v10020027mg [Eutr...    78   1e-12
ref|XP_006578098.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12

>ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g03580 gi|6091764|gb|AAF03474.1|AC009327_13
           hypothetical protein [Arabidopsis thaliana]
           gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis
           thaliana] gi|29824355|gb|AAP04138.1| unknown protein
           [Arabidopsis thaliana] gi|332640438|gb|AEE73959.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 882

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 39/87 (44%), Positives = 55/87 (63%)
 Frame = -3

Query: 261 RKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQI 82
           +  YLWNS      K     E LE Y +++  K  PDKYTF  ++KACAGL D + G  +
Sbjct: 69  KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128

Query: 81  HEEIKMLGIESDIFVGTSLIDMYAKCG 1
           +E+I  +G ESD+FVG +L+DMY++ G
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMG 155



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/85 (35%), Positives = 46/85 (54%)
 Frame = -3

Query: 255 TYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHE 76
           T  WN+  +  V+       L+   QM+  + VPD  TF+  L  CA L   + G +IH 
Sbjct: 474 TVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHC 533

Query: 75  EIKMLGIESDIFVGTSLIDMYAKCG 1
            +   G ES++ +G +LI+MY+KCG
Sbjct: 534 CLLRFGYESELQIGNALIEMYSKCG 558


>gb|EXB65293.1| hypothetical protein L484_025372 [Morus notabilis]
          Length = 869

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 41/83 (49%), Positives = 54/83 (65%)
 Frame = -3

Query: 249 LWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEI 70
           LWNS     V+ N+  + L  Y  M  E   PDKYTF  ++KAC G  DLQ+G+ IH EI
Sbjct: 89  LWNSMIRAYVRSNRFGDALGMYRSMLKEGMEPDKYTFNFVVKACTGSLDLQEGVLIHREI 148

Query: 69  KMLGIESDIFVGTSLIDMYAKCG 1
            + G+ESD+F+GTSL+ MY+K G
Sbjct: 149 ALRGLESDVFIGTSLLYMYSKMG 171



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 34/82 (41%), Positives = 50/82 (60%)
 Frame = -3

Query: 246 WNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEIK 67
           WN+  +   +    +E + ++NQM++E   P+  TFV +L A A L DL+ GM  H  + 
Sbjct: 594 WNALISGYAQSKHAKEAISAFNQMRLENVRPNSVTFVSILPAVAYLSDLRLGMAFHASLI 653

Query: 66  MLGIESDIFVGTSLIDMYAKCG 1
            +G+ S+  VG SLIDMYAKCG
Sbjct: 654 KMGVLSNTLVGNSLIDMYAKCG 675



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/82 (39%), Positives = 48/82 (58%)
 Frame = -3

Query: 246 WNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEIK 67
           WNS      ++ +    +E + ++++    PD+ T V L++AC  L+DL +G  IH +I 
Sbjct: 492 WNSLINVCTQIGEPFHAMEMFRKLQLSGIQPDERTMVALVQACILLNDLGQGACIHGKII 551

Query: 66  MLGIESDIFVGTSLIDMYAKCG 1
             G+ESD  V  SLI MYAKCG
Sbjct: 552 KYGLESDNHVINSLIGMYAKCG 573


>gb|EMJ22183.1| hypothetical protein PRUPE_ppa002467mg [Prunus persica]
          Length = 670

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 42/103 (40%), Positives = 58/103 (56%)
 Frame = -3

Query: 309 QNLPKTNPPSKPQRSERKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPL 130
           Q  PKTNP           YLWNS    L+      + L  Y +M+     PD+YTF  +
Sbjct: 75  QAFPKTNP-----------YLWNSIIRALIHNGFYSKALGHYTEMQKMNVQPDRYTFPSV 123

Query: 129 LKACAGLHDLQKGMQIHEEIKMLGIESDIFVGTSLIDMYAKCG 1
           + ACAGL DL+ GM +H+ I  +G  SD+++G +LIDMYA+ G
Sbjct: 124 INACAGLCDLETGMIVHQRISEMGFGSDLYIGNALIDMYARFG 166



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 24/82 (29%), Positives = 47/82 (57%)
 Frame = -3

Query: 246 WNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEIK 67
           WNS  +        EE LE +++++++  +PD ++   +L AC  L D+++G  +H  ++
Sbjct: 186 WNSLISGYSSNGYWEEALEIFHRLRMDGLLPDSFSISGVLPACGSLVDVREGQIVHALVE 245

Query: 66  MLGIESDIFVGTSLIDMYAKCG 1
            +G+ +D+ V   L+ MY K G
Sbjct: 246 KIGVHADVLVSNGLLSMYFKFG 267



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
 Frame = -3

Query: 261 RKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQI 82
           R +  WN+      +L   EE +  + +M  E T PD  T   +L+ACA L DL     +
Sbjct: 282 RDSVSWNTVICGYSQLGLFEESINLFMEMVNEFT-PDLLTITSVLRACAHLRDLGLARYV 340

Query: 81  HEEIKM--LGIESDIFVGTSLIDMYAKCG 1
           H+ +K   LG + D+ V  +L DMYAKCG
Sbjct: 341 HDYMKRIKLGFDYDVIVNNALADMYAKCG 369


>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449522468|ref|XP_004168248.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 39/89 (43%), Positives = 56/89 (62%)
 Frame = -3

Query: 267 SERKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGM 88
           S+R  +LWN            E  +  Y QM+    VPDK+TF  +LKAC+ L  +++G 
Sbjct: 63  SKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGK 122

Query: 87  QIHEEIKMLGIESDIFVGTSLIDMYAKCG 1
           +IH+++   G+ESD+FVG +LIDMYAKCG
Sbjct: 123 KIHKDVIRSGLESDVFVGAALIDMYAKCG 151


>ref|XP_006296957.1| hypothetical protein CARUB_v10012948mg [Capsella rubella]
           gi|482565666|gb|EOA29855.1| hypothetical protein
           CARUB_v10012948mg [Capsella rubella]
          Length = 884

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 36/87 (41%), Positives = 54/87 (62%)
 Frame = -3

Query: 261 RKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQI 82
           +  YLWNS            + LE Y +++  K  PDKYTF  ++KACAGL D + G  +
Sbjct: 71  KNVYLWNSIIRAFCNNGLYPKALEFYGKLRDSKVSPDKYTFPSVVKACAGLFDAETGDLV 130

Query: 81  HEEIKMLGIESDIFVGTSLIDMYAKCG 1
           +E+I  +G ESD++VG +L+DMY++ G
Sbjct: 131 YEQILEMGFESDLYVGNALVDMYSRMG 157



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/87 (36%), Positives = 46/87 (52%)
 Frame = -3

Query: 261 RKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQI 82
           R T  WN+  +  V        L+   QM+  + VPD  TF+  L  CA L   + G +I
Sbjct: 475 RDTVTWNTVISACVSSGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEI 534

Query: 81  HEEIKMLGIESDIFVGTSLIDMYAKCG 1
           H  +   G ES++ VG +LI+MY+KCG
Sbjct: 535 HCCLLRFGYESELQVGNALIEMYSKCG 561



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
 Frame = -3

Query: 261 RKTYLWNSEFTRLVKLNKMEEVLESYNQMKI-EKTVPDKYTFVPLLKACAGLHDLQKGMQ 85
           + T  WNS  +  ++   + E ++ +  M I  +   D  T++ L+     L DL+ G  
Sbjct: 373 KDTVSWNSIISGYIQNGDLSEAMKLFRLMMIIMEEQADHITYLMLISVSTRLADLKFGRG 432

Query: 84  IHEEIKMLGIESDIFVGTSLIDMYAKCG 1
           +H  +   GI  D+ VG SLIDMYAKCG
Sbjct: 433 LHSNVMKSGINFDLSVGNSLIDMYAKCG 460


>ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330236|gb|EFH60655.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 882

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 35/87 (40%), Positives = 55/87 (63%)
 Frame = -3

Query: 261 RKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQI 82
           +  Y+WNS      K     + LE Y +++  K  PDKYTF  ++KACAGL D + G  +
Sbjct: 69  KNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128

Query: 81  HEEIKMLGIESDIFVGTSLIDMYAKCG 1
           +++I  +G ESD++VG +L+DMY++ G
Sbjct: 129 YKQILEMGFESDLYVGNALVDMYSRMG 155



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/85 (36%), Positives = 46/85 (54%)
 Frame = -3

Query: 255 TYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHE 76
           T  WN+  +  V+       L+   QM+  K VPD  TF+  L  CA L   + G +IH 
Sbjct: 474 TVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHC 533

Query: 75  EIKMLGIESDIFVGTSLIDMYAKCG 1
            +   G ES++ +G +LI+MY+KCG
Sbjct: 534 CLLRFGYESELQIGNALIEMYSKCG 558


>gb|AFG66680.1| hypothetical protein 0_14992_02, partial [Pinus taeda]
           gi|383167278|gb|AFG66681.1| hypothetical protein
           0_14992_02, partial [Pinus taeda]
           gi|383167279|gb|AFG66682.1| hypothetical protein
           0_14992_02, partial [Pinus taeda]
           gi|383167280|gb|AFG66683.1| hypothetical protein
           0_14992_02, partial [Pinus taeda]
          Length = 150

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 34/83 (40%), Positives = 53/83 (63%)
 Frame = -3

Query: 249 LWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEI 70
           LWN+  T   K   +EE L+ +++MK+     D +TF  +L  C  L +L++G +IH EI
Sbjct: 4   LWNAMITAYAKNEPVEEALKLFHEMKLSGIRADHFTFASVLPVCGNLGNLEQGKEIHHEI 63

Query: 69  KMLGIESDIFVGTSLIDMYAKCG 1
              G +SD++VG++L+DMY KCG
Sbjct: 64  NRSGYQSDVYVGSALVDMYVKCG 86


>gb|EMJ22213.1| hypothetical protein PRUPE_ppa023643mg, partial [Prunus persica]
          Length = 888

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 45/137 (32%), Positives = 68/137 (49%)
 Frame = -3

Query: 411 AALNHLIHINLSNPHQNFHTNAYSSLARETYENPQNLPKTNPPSKPQRSERKTYLWNSEF 232
           + L HLI     N +  F  +  +SL  ++ +NP  +                 LWNS  
Sbjct: 66  STLTHLI-----NSYSLFKKSGLASLVFDSAQNPSVI-----------------LWNSMI 103

Query: 231 TRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEIKMLGIE 52
               + NK +E  + Y+ M  +   PD YTF  +LKAC    D ++G+ +H E+    ++
Sbjct: 104 RAYTRANKYKEARKMYHSMLEQGVEPDNYTFNFVLKACTAALDFEEGVLVHREVARKQLD 163

Query: 51  SDIFVGTSLIDMYAKCG 1
           SD+F+GTSLIDMY K G
Sbjct: 164 SDVFIGTSLIDMYCKMG 180



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 33/82 (40%), Positives = 45/82 (54%)
 Frame = -3

Query: 246 WNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEIK 67
           WN      ++     E + S++QMK+E   P+  TFV +L A A L  L++GM  H  I 
Sbjct: 603 WNVIIAGYMQGGYASEAICSFHQMKLENFQPNIVTFVSILPAVAYLAALREGMAFHACII 662

Query: 66  MLGIESDIFVGTSLIDMYAKCG 1
             G  S+  VG  LIDMY+KCG
Sbjct: 663 QTGFLSNTLVGNGLIDMYSKCG 684



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/88 (32%), Positives = 44/88 (50%)
 Frame = -3

Query: 264 ERKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQ 85
           +R    W +            EVLE ++ MK + T  +K T +  L A   + D +KG +
Sbjct: 293 DRDDVSWGTMMAGYASNGLFVEVLELFDWMKGDNTKMNKVTIISTLLAATEMRDSEKGKE 352

Query: 84  IHEEIKMLGIESDIFVGTSLIDMYAKCG 1
           IH       ++SD+ V TS++ MYAKCG
Sbjct: 353 IHFCASQQELDSDVSVATSILTMYAKCG 380


>ref|XP_004237761.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Solanum lycopersicum]
          Length = 1021

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 33/82 (40%), Positives = 51/82 (62%)
 Frame = -3

Query: 246 WNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEIK 67
           WN+     V+  + EE    +++M +E+ +PD+     +L ACA +HDL KG Q+H  + 
Sbjct: 499 WNAIIVGYVQDEEEEEAFNMFHKMTLERIIPDEACLASVLSACANIHDLNKGKQVHSLLV 558

Query: 66  MLGIESDIFVGTSLIDMYAKCG 1
             G+ES +F G+SL+DMY KCG
Sbjct: 559 KYGLESGLFAGSSLVDMYCKCG 580



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 33/88 (37%), Positives = 50/88 (56%)
 Frame = -3

Query: 264 ERKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQ 85
           E+   LWN+      +     +V+E +  M++     D+YT+  +L ACA L D++ G Q
Sbjct: 392 EKNEVLWNALLAGYAQNGSACKVVELFRSMRLSTFETDEYTYTSILSACACLEDVEMGRQ 451

Query: 84  IHEEIKMLGIESDIFVGTSLIDMYAKCG 1
           +H  I      S++FVG +LIDMYAKCG
Sbjct: 452 LHSIIIKNKFASNLFVGNALIDMYAKCG 479



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/83 (39%), Positives = 47/83 (56%)
 Frame = -3

Query: 249 LWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEI 70
           LW +  +  ++ +  EE L  Y +M+    +PD+ TF   LKAC+ L  +Q G +IH  I
Sbjct: 700 LWTAMISGNIQNDCCEEALIGYQEMRKFNVMPDQATFASALKACSTLAFMQDGRKIHCLI 759

Query: 69  KMLGIESDIFVGTSLIDMYAKCG 1
              G + D    +SLIDMYAKCG
Sbjct: 760 FHTGFDMDELTSSSLIDMYAKCG 782



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/82 (36%), Positives = 46/82 (56%)
 Frame = -3

Query: 246 WNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEIK 67
           WNS      +   +E V+E++  M      P+++++  +L ACA L +++ G Q+H  + 
Sbjct: 130 WNSIILMYSRNGLLENVVEAFGSMWNSGVWPNQFSYAIVLSACARLVEVEIGKQVHCSVV 189

Query: 66  MLGIESDIFVGTSLIDMYAKCG 1
             G E D F   SLIDMYAKCG
Sbjct: 190 KTGFEFDSFTEGSLIDMYAKCG 211


>ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 36/83 (43%), Positives = 50/83 (60%)
 Frame = -3

Query: 249 LWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEI 70
           LWNS      +L+  +E ++SY  M      PDKYTF  +LKAC G  D  +G+ IH++I
Sbjct: 94  LWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQDI 153

Query: 69  KMLGIESDIFVGTSLIDMYAKCG 1
               +E D+F+GT L+DMY K G
Sbjct: 154 ASRELECDVFIGTGLVDMYCKMG 176



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/82 (41%), Positives = 44/82 (53%)
 Frame = -3

Query: 246 WNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEIK 67
           WN+      K       LE + ++++    PD  T V LL ACA L DL  G+  H  I 
Sbjct: 498 WNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNII 557

Query: 66  MLGIESDIFVGTSLIDMYAKCG 1
             GIES++ V  +LIDMYAKCG
Sbjct: 558 KNGIESEMHVKVALIDMYAKCG 579



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/82 (37%), Positives = 43/82 (52%)
 Frame = -3

Query: 246 WNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEIK 67
           WN      +      E + ++NQMK+E   P+  TFV +L A + L  L++ M  H  I 
Sbjct: 600 WNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACII 659

Query: 66  MLGIESDIFVGTSLIDMYAKCG 1
            +G  S   +G SLIDMYAK G
Sbjct: 660 RMGFISSTLIGNSLIDMYAKSG 681


>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 38/88 (43%), Positives = 54/88 (61%)
 Frame = -3

Query: 264 ERKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQ 85
           E+    W +     ++  + E+VLE +N + +    P+K TF  +L ACA +  L KGM 
Sbjct: 410 EKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMN 469

Query: 84  IHEEIKMLGIESDIFVGTSLIDMYAKCG 1
           +H +I  LGI+ DIFVGT+L DMYAKCG
Sbjct: 470 VHGKIIKLGIQYDIFVGTALTDMYAKCG 497



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 32/88 (36%), Positives = 48/88 (54%)
 Frame = -3

Query: 264 ERKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQ 85
           ER    W++   R  +    EE L+ +++M  E   P+   F   L A A L  L  G+ 
Sbjct: 278 ERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGIN 337

Query: 84  IHEEIKMLGIESDIFVGTSLIDMYAKCG 1
           IH  +  +GI+ D+F+G+SLID+Y KCG
Sbjct: 338 IHGHVTKIGIDKDVFIGSSLIDLYCKCG 365


>emb|CBI34885.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 38/88 (43%), Positives = 54/88 (61%)
 Frame = -3

Query: 264 ERKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQ 85
           E+    W +     ++  + E+VLE +N + +    P+K TF  +L ACA +  L KGM 
Sbjct: 410 EKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMN 469

Query: 84  IHEEIKMLGIESDIFVGTSLIDMYAKCG 1
           +H +I  LGI+ DIFVGT+L DMYAKCG
Sbjct: 470 VHGKIIKLGIQYDIFVGTALTDMYAKCG 497



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 32/88 (36%), Positives = 48/88 (54%)
 Frame = -3

Query: 264 ERKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQ 85
           ER    W++   R  +    EE L+ +++M  E   P+   F   L A A L  L  G+ 
Sbjct: 278 ERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGIN 337

Query: 84  IHEEIKMLGIESDIFVGTSLIDMYAKCG 1
           IH  +  +GI+ D+F+G+SLID+Y KCG
Sbjct: 338 IHGHVTKIGIDKDVFIGSSLIDLYCKCG 365


>emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
          Length = 728

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 38/88 (43%), Positives = 54/88 (61%)
 Frame = -3

Query: 264 ERKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQ 85
           E+    W +     ++  + E+VLE +N + +    P+K TF  +L ACA +  L KGM 
Sbjct: 410 EKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMN 469

Query: 84  IHEEIKMLGIESDIFVGTSLIDMYAKCG 1
           +H +I  LGI+ DIFVGT+L DMYAKCG
Sbjct: 470 VHGKIIKLGIQYDIFVGTALTDMYAKCG 497



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 32/88 (36%), Positives = 48/88 (54%)
 Frame = -3

Query: 264 ERKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQ 85
           ER    W++   R  +    EE L+ +++M  E   P+   F   L A A L  L  G+ 
Sbjct: 278 ERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGIN 337

Query: 84  IHEEIKMLGIESDIFVGTSLIDMYAKCG 1
           IH  +  +GI+ D+F+G+SLID+Y KCG
Sbjct: 338 IHGHVTKIGIDKDVFIGSSLIDLYCKCG 365


>ref|XP_006356287.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565379764|ref|XP_006356288.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565379766|ref|XP_006356289.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X3 [Solanum tuberosum]
           gi|565379768|ref|XP_006356290.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X4 [Solanum tuberosum]
           gi|565379770|ref|XP_006356291.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X5 [Solanum tuberosum]
          Length = 1028

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 33/82 (40%), Positives = 51/82 (62%)
 Frame = -3

Query: 246 WNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEIK 67
           WN+     V+  + EE    +++M +E+ +PD+     +L ACA +HDL KG Q+H  + 
Sbjct: 499 WNAIIVGYVQDEEEEEAFIMFHKMTLERIIPDEACLASVLSACANIHDLNKGKQVHSLLV 558

Query: 66  MLGIESDIFVGTSLIDMYAKCG 1
             G+ES +F G+SL+DMY KCG
Sbjct: 559 KYGLESGLFAGSSLVDMYCKCG 580



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/88 (36%), Positives = 50/88 (56%)
 Frame = -3

Query: 264 ERKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQ 85
           E+   LWN+      +     +V++ +  M++     D+YT+  +L ACA L D++ G Q
Sbjct: 392 EKNEVLWNALLAGYAQNGSACKVVKLFRSMRLSSFETDEYTYTSILSACACLEDVEMGRQ 451

Query: 84  IHEEIKMLGIESDIFVGTSLIDMYAKCG 1
           +H  I      S++FVG +LIDMYAKCG
Sbjct: 452 LHSIIIKNKFASNLFVGNALIDMYAKCG 479



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/83 (39%), Positives = 47/83 (56%)
 Frame = -3

Query: 249 LWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEI 70
           LW +  +  ++ +  EE L  Y +M+    +PD+ TF   LKAC+ L  +Q G +IH  I
Sbjct: 700 LWTAMISGNIQNDCGEEALIGYQKMRKFNVMPDQATFASALKACSTLASMQDGRKIHSLI 759

Query: 69  KMLGIESDIFVGTSLIDMYAKCG 1
              G + D    +SLIDMYAKCG
Sbjct: 760 FHTGFDMDELTSSSLIDMYAKCG 782



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/82 (36%), Positives = 46/82 (56%)
 Frame = -3

Query: 246 WNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEIK 67
           WNS      +   +E V+E++  M      P+++++  +L ACA L +++ G Q+H  + 
Sbjct: 130 WNSIILMYSRNGLLENVVEAFGSMWNSGVWPNQFSYAIVLSACARLVEVEIGKQVHCSVV 189

Query: 66  MLGIESDIFVGTSLIDMYAKCG 1
             G E D F   SLIDMYAKCG
Sbjct: 190 KTGFEFDSFTEGSLIDMYAKCG 211


>gb|AHB18407.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 522

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
 Frame = -3

Query: 273 QRSERKTYL--WNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDL 100
           Q S+R  Y   WNS  +   +L + E+ L  Y QM+ E   PD++TF   LKACAG+  +
Sbjct: 149 QMSKRNEYAFPWNSLISGYAELGQYEDALALYFQMEEEGVEPDRFTFPRALKACAGIGSI 208

Query: 99  QKGMQIHEEIKMLGIESDIFVGTSLIDMYAKCG 1
             G  +H ++   G  +D+FV  +LIDMYAKCG
Sbjct: 209 HVGQAVHRDVVRKGFGNDVFVLNALIDMYAKCG 241


>ref|XP_004289272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Fragaria vesca subsp. vesca]
          Length = 795

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 30/91 (32%), Positives = 60/91 (65%)
 Frame = -3

Query: 273 QRSERKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQK 94
           + +E+   +WN+ F+   +  + EE L+ Y+++++ + +P+++TF  ++ A + L  +Q 
Sbjct: 512 EMNEKDIVVWNAMFSGYAQQQESEETLKLYSELQVSRQIPNEFTFASVISAASSLASIQH 571

Query: 93  GMQIHEEIKMLGIESDIFVGTSLIDMYAKCG 1
           G Q H +I  +G+E+D FV  +L+DMY+KCG
Sbjct: 572 GQQFHSQIIKVGLENDPFVTNALVDMYSKCG 602



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = -3

Query: 264 ERKTYLWNSEFTRLVKLNKMEEVLESYNQM-KIEKTVPDKYTFVPLLKACAGLHDLQKGM 88
           ER +  W+S  +   K  K EE L+ +++  +     P+++TF  +++AC       +G 
Sbjct: 110 ERSSVTWSSMVSMYTKHGKSEEALKVFSEFHRSSDGRPNEFTFPSVIRACTQFGGADQGS 169

Query: 87  QIHEEIKMLGIESDIFVGTSLIDMYAKCG 1
           Q+H  +   G + ++FVGTSLID Y K G
Sbjct: 170 QVHCFVVKTGFDKEVFVGTSLIDFYVKMG 198



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/82 (37%), Positives = 39/82 (47%)
 Frame = -3

Query: 246 WNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEIK 67
           W        K  K E  L+ + QM+    VPDKY    LL AC+ L  +  G QIH  + 
Sbjct: 218 WTIVIAGYAKSGKSEAALKLFYQMRDTDVVPDKYVLSALLTACSALKFIGGGKQIHAYVL 277

Query: 66  MLGIESDIFVGTSLIDMYAKCG 1
             G E D+ V   L+D Y KCG
Sbjct: 278 RRGTEMDVSVVNVLVDFYTKCG 299


>ref|XP_002881665.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327504|gb|EFH57924.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 836

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
 Frame = -3

Query: 249 LWNSEFTRLVKLNKMEEVLESYNQMKIEKTV-PDKYTFVPLLKACAGLHDLQKGMQIHEE 73
           LWNS      +    +E LE +  M   K + PDKYTF   LKACAG  D ++G++IH+ 
Sbjct: 66  LWNSMIRGYTRAGLHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGSMDFEEGLRIHDL 125

Query: 72  IKMLGIESDIFVGTSLIDMYAKCG 1
           I  +G ESD+++GT+L++MY K G
Sbjct: 126 IAEMGFESDVYIGTALVEMYCKAG 149



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/88 (39%), Positives = 49/88 (55%)
 Frame = -3

Query: 264 ERKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQ 85
           E+ T  WN      +   + EE + ++ QMK+EK  P+  TFV +++A A L  L  GM 
Sbjct: 566 EKSTVSWNIMMNGYLLHGQAEEAIATFRQMKVEKFQPNAVTFVNIVRAAAELAALSLGMS 625

Query: 84  IHEEIKMLGIESDIFVGTSLIDMYAKCG 1
           +H  +   G  S   VG SL+DMYAKCG
Sbjct: 626 VHSSLIQFGFCSHTPVGNSLVDMYAKCG 653



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/82 (37%), Positives = 44/82 (53%)
 Frame = -3

Query: 246 WNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEIK 67
           W +           EEVLE ++ M+      +K      L+A A + +L+KG+ IHE   
Sbjct: 268 WGTMMAAYAHNGSFEEVLELFDVMRNYDVRMNKVAAASALQAAAYVGNLEKGIAIHEYTV 327

Query: 66  MLGIESDIFVGTSLIDMYAKCG 1
             G+ SDI V TSLI+MY+KCG
Sbjct: 328 QQGMMSDISVATSLINMYSKCG 349


>ref|XP_006408289.1| hypothetical protein EUTSA_v10020027mg [Eutrema salsugineum]
           gi|557109435|gb|ESQ49742.1| hypothetical protein
           EUTSA_v10020027mg [Eutrema salsugineum]
          Length = 883

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/87 (40%), Positives = 56/87 (64%)
 Frame = -3

Query: 261 RKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQI 82
           +  YLWNS    L +     + LE Y +++     PDK+TF P++KACAGL D + G  +
Sbjct: 69  KNVYLWNSIIRALSQNGLFPKALEFYGKLRETNVSPDKFTFPPVVKACAGLLDAEIGDCV 128

Query: 81  HEEIKMLGIESDIFVGTSLIDMYAKCG 1
           +++I   G+ESD++VG +L+DMY++ G
Sbjct: 129 YKQILESGLESDLYVGNALVDMYSRMG 155



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/87 (34%), Positives = 46/87 (52%)
 Frame = -3

Query: 261 RKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQI 82
           R T  WN+  +  V        L+  +QM+    V D  TF+ +L  CA L   + G +I
Sbjct: 473 RDTVTWNTVISSCVCFGDFATGLQLTSQMRTSGAVLDMATFLVILPMCASLAAKRPGKEI 532

Query: 81  HEEIKMLGIESDIFVGTSLIDMYAKCG 1
           H  +   G ES++ +G +LI+MY+KCG
Sbjct: 533 HCCLLRFGYESELPIGNALIEMYSKCG 559


>ref|XP_006578098.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 980

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/82 (46%), Positives = 52/82 (63%)
 Frame = -3

Query: 246 WNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEIK 67
           W +  +  V+  + E  L +Y+QM++ K  PD+YTF  L+KAC+ L  L++G QIH  I 
Sbjct: 576 WTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIV 635

Query: 66  MLGIESDIFVGTSLIDMYAKCG 1
            L    D FV TSL+DMYAKCG
Sbjct: 636 KLNCAFDPFVMTSLVDMYAKCG 657


>ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Vitis vinifera]
          Length = 1005

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 47/128 (36%), Positives = 65/128 (50%)
 Frame = -3

Query: 384 NLSNPHQNFHTNAYSSLARETYENPQNLPKTNPPSKPQRSERKTYLWNSEFTRLVKLNKM 205
           +L N +  FH      LAR  +++  N      PS+         LWNS      +  + 
Sbjct: 68  HLINLYSLFHK---CDLARSVFDSTPN------PSR--------ILWNSMIRAYTRSKQY 110

Query: 204 EEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEIKMLGIESDIFVGTSL 25
            E LE Y  M  +   PDKYTF  +LKAC G  +LQ+G+  H EI   G+E D+F+G  L
Sbjct: 111 NEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGL 170

Query: 24  IDMYAKCG 1
           +DMY+K G
Sbjct: 171 VDMYSKMG 178



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/89 (38%), Positives = 48/89 (53%)
 Frame = -3

Query: 267 SERKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGM 88
           S R    WNS      ++      ++ + ++++    PD  T V ++ ACA L+DL +G 
Sbjct: 492 SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGT 551

Query: 87  QIHEEIKMLGIESDIFVGTSLIDMYAKCG 1
            IH  I  LG ESD  V  +LIDMYAKCG
Sbjct: 552 CIHGLIVKLGFESDCHVKNALIDMYAKCG 580



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/82 (40%), Positives = 47/82 (57%)
 Frame = -3

Query: 246 WNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQIHEEIK 67
           WN      ++    +E + S++QM++E   P+  TFV +L A A L   ++GM  H  I 
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 660

Query: 66  MLGIESDIFVGTSLIDMYAKCG 1
            +G  S+  VG SLIDMYAKCG
Sbjct: 661 QMGFLSNTLVGNSLIDMYAKCG 682



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/87 (35%), Positives = 48/87 (55%)
 Frame = -3

Query: 261 RKTYLWNSEFTRLVKLNKMEEVLESYNQMKIEKTVPDKYTFVPLLKACAGLHDLQKGMQI 82
           R    W++    LV+    EE L  + +M+ +K  P++ T + +L ACA L  L+ G  I
Sbjct: 393 RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI 452

Query: 81  HEEIKMLGIESDIFVGTSLIDMYAKCG 1
           H       ++SD+  GT+L+ MYAKCG
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCG 479