BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00019132
         (424 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006842072.1| hypothetical protein AMTR_s00078p00055040 [A...   137   1e-30
ref|XP_006842073.1| hypothetical protein AMTR_s00078p00056260 [A...   135   4e-30
ref|XP_006645957.1| PREDICTED: probable RNA-dependent RNA polyme...   133   2e-29
sp|Q8LHH9.1|SHL2_ORYSJ RecName: Full=Probable RNA-dependent RNA ...   131   8e-29
gb|EEE54718.1| hypothetical protein OsJ_02054 [Oryza sativa Japo...   131   8e-29
gb|EEC70798.1| hypothetical protein OsI_02249 [Oryza sativa Indi...   131   8e-29
ref|NP_001043229.1| Os01g0527600 [Oryza sativa Japonica Group] g...   131   8e-29
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   131   1e-28
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    130   2e-28
gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [L...   130   2e-28
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     130   2e-28
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   130   2e-28
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   129   3e-28
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   129   5e-28
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...   129   5e-28
gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus...   128   7e-28
gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]       128   7e-28
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   128   7e-28
ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago trunc...   128   9e-28
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     128   9e-28

>ref|XP_006842072.1| hypothetical protein AMTR_s00078p00055040 [Amborella trichopoda]
            gi|548844121|gb|ERN03747.1| hypothetical protein
            AMTR_s00078p00055040 [Amborella trichopoda]
          Length = 1207

 Score =  137 bits (346), Expect = 1e-30
 Identities = 72/141 (51%), Positives = 93/141 (65%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD+S +GAL+E+CL LA+ AAIAVD PKTGK   LP++LKPK YPDFMEK    S
Sbjct: 935  AHVVHADLSKDGALDENCLYLAELAAIAVDVPKTGKQVFLPNNLKPKMYPDFMEKDGIFS 994

Query: 182  YKSEKLLGVLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLK 361
            YKSEK+LG+LYR                ++P+ +   P +D DLE +G + +++EAW  K
Sbjct: 995  YKSEKILGILYR----KIKDAPHIKFKEMEPQSLDDLP-YDLDLEVLGSEDFLSEAWHYK 1049

Query: 362  CGYDQHLRSLLGQYNVKREGE 424
            C YD+ +   LG YNV  EGE
Sbjct: 1050 CLYDRQIILFLGLYNVSSEGE 1070


>ref|XP_006842073.1| hypothetical protein AMTR_s00078p00056260 [Amborella trichopoda]
            gi|548844122|gb|ERN03748.1| hypothetical protein
            AMTR_s00078p00056260 [Amborella trichopoda]
          Length = 1207

 Score =  135 bits (341), Expect = 4e-30
 Identities = 71/141 (50%), Positives = 91/141 (64%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD+S +GAL+E+CL LA+ AAIAVD PKTGK   LP++LKPK YPDFMEK    S
Sbjct: 935  AHVVHADLSKDGALDENCLYLAELAAIAVDVPKTGKQVFLPNNLKPKMYPDFMEKDGIFS 994

Query: 182  YKSEKLLGVLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLK 361
            YKSEK+LG+LY+                ++P  +   P +D DLE  G + +++EAW  K
Sbjct: 995  YKSEKILGILYQ----KIKDAPQLKFDEIEPHSLDDLP-YDLDLEVPGSENFLSEAWHYK 1049

Query: 362  CGYDQHLRSLLGQYNVKREGE 424
            C YD+ +   LG YNV  EGE
Sbjct: 1050 CLYDRQIILFLGLYNVSSEGE 1070


>ref|XP_006645957.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Oryza
            brachyantha]
          Length = 1105

 Score =  133 bits (335), Expect = 2e-29
 Identities = 71/141 (50%), Positives = 87/141 (61%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD+S+ GA++E C+ LA+ AA AVDFPKTGK  I+P HLKPK YPDFM K E+LS
Sbjct: 837  AHVVHADLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPQHLKPKVYPDFMGKEESLS 896

Query: 182  YKSEKLLGVLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLK 361
            YKSEK+LG LYR                  P D+     +D DLE  G   ++A AW+ K
Sbjct: 897  YKSEKILGRLYRSIQEASNGDVVSEEVCT-PNDLP----YDIDLEVPGASDFLASAWQCK 951

Query: 362  CGYDQHLRSLLGQYNVKREGE 424
            C Y+  L +LL QY V  E E
Sbjct: 952  CSYEAQLSALLNQYKVHTEAE 972


>sp|Q8LHH9.1|SHL2_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase SHL2; AltName:
            Full=Protein SHOOTLESS 2 gi|21328146|dbj|BAC00725.1|
            putative RNA-dependent RNA polymerase [Oryza sativa
            Japonica Group] gi|157279691|dbj|BAF80151.1| SHOOTLESS2
            [Oryza sativa Japonica Group]
          Length = 1218

 Score =  131 bits (330), Expect = 8e-29
 Identities = 70/141 (49%), Positives = 86/141 (60%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD+S+ GA++E C+ LA+ AA AVDFPKTGK  I+P HLKPK YPDFM K +  S
Sbjct: 950  AHVVHADLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQS 1009

Query: 182  YKSEKLLGVLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLK 361
            YKSEK+LG LYR                  P D+     +D DLE  G   ++A AW+ K
Sbjct: 1010 YKSEKILGRLYRSIQEASNGDVVSQEVCT-PNDLP----YDIDLEVPGASDFLASAWQCK 1064

Query: 362  CGYDQHLRSLLGQYNVKREGE 424
            C YD  L +LL QY V+ E E
Sbjct: 1065 CSYDAQLSALLSQYRVRTEAE 1085


>gb|EEE54718.1| hypothetical protein OsJ_02054 [Oryza sativa Japonica Group]
          Length = 1571

 Score =  131 bits (330), Expect = 8e-29
 Identities = 70/141 (49%), Positives = 86/141 (60%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD+S+ GA++E C+ LA+ AA AVDFPKTGK  I+P HLKPK YPDFM K +  S
Sbjct: 1303 AHVVHADLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQS 1362

Query: 182  YKSEKLLGVLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLK 361
            YKSEK+LG LYR                  P D+     +D DLE  G   ++A AW+ K
Sbjct: 1363 YKSEKILGRLYRSIQEASNGDVVSQEVCT-PNDLP----YDIDLEVPGASDFLASAWQCK 1417

Query: 362  CGYDQHLRSLLGQYNVKREGE 424
            C YD  L +LL QY V+ E E
Sbjct: 1418 CSYDAQLSALLSQYRVRTEAE 1438


>gb|EEC70798.1| hypothetical protein OsI_02249 [Oryza sativa Indica Group]
          Length = 307

 Score =  131 bits (330), Expect = 8e-29
 Identities = 70/141 (49%), Positives = 86/141 (60%)
 Frame = +2

Query: 2   AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
           AHVV AD+S+ GA++E C+ LA+ AA AVDFPKTGK  I+P HLKPK YPDFM K +  S
Sbjct: 39  AHVVHADLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQS 98

Query: 182 YKSEKLLGVLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLK 361
           YKSEK+LG LYR                  P D+     +D DLE  G   ++A AW+ K
Sbjct: 99  YKSEKILGRLYRSIQEASNGDVVSQEVCT-PNDLP----YDIDLEVPGASDFLASAWQCK 153

Query: 362 CGYDQHLRSLLGQYNVKREGE 424
           C YD  L +LL QY V+ E E
Sbjct: 154 CSYDAQLSALLSQYRVRTEAE 174


>ref|NP_001043229.1| Os01g0527600 [Oryza sativa Japonica Group]
           gi|113532760|dbj|BAF05143.1| Os01g0527600, partial
           [Oryza sativa Japonica Group]
          Length = 385

 Score =  131 bits (330), Expect = 8e-29
 Identities = 70/141 (49%), Positives = 86/141 (60%)
 Frame = +2

Query: 2   AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
           AHVV AD+S+ GA++E C+ LA+ AA AVDFPKTGK  I+P HLKPK YPDFM K +  S
Sbjct: 117 AHVVHADLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQS 176

Query: 182 YKSEKLLGVLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLK 361
           YKSEK+LG LYR                  P D+     +D DLE  G   ++A AW+ K
Sbjct: 177 YKSEKILGRLYRSIQEASNGDVVSQEVCT-PNDLP----YDIDLEVPGASDFLASAWQCK 231

Query: 362 CGYDQHLRSLLGQYNVKREGE 424
           C YD  L +LL QY V+ E E
Sbjct: 232 CSYDAQLSALLSQYRVRTEAE 252


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  131 bits (329), Expect = 1e-28
 Identities = 74/142 (52%), Positives = 88/142 (61%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD+S+ GA +++CL LA+ AA AVDFPKTGK   +P +LKPK YPDFM K E  S
Sbjct: 930  AHVVHADLSEYGATDKNCLTLAELAATAVDFPKTGKVVSMPPYLKPKMYPDFMGKEEYQS 989

Query: 182  YKSEKLLGVLYR-XXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKL 358
            YKSEK+LG LYR                 + P DI     +D+DLE VG   YI++AW  
Sbjct: 990  YKSEKILGRLYRQIKDAYDEDVAASSELNLVPGDIP----YDSDLEVVGASDYISDAWDQ 1045

Query: 359  KCGYDQHLRSLLGQYNVKREGE 424
            KC YD  L  LL QY VKRE E
Sbjct: 1046 KCSYDGQLNGLLSQYKVKREEE 1067


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  130 bits (327), Expect = 2e-28
 Identities = 73/142 (51%), Positives = 88/142 (61%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD+S+ GAL+E CL+LA+ AA+AVDFPKTGK   +P  LKPK YPDFM K E  S
Sbjct: 927  AHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQS 986

Query: 182  YKSEKLLGVLYR-XXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKL 358
            YKS+K+LG LYR                 V P+DI     +D+ LE +G   +I +AW  
Sbjct: 987  YKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIP----YDSTLEILGSTAFIDDAWNS 1042

Query: 359  KCGYDQHLRSLLGQYNVKREGE 424
            KC YD  L  LLGQY V RE E
Sbjct: 1043 KCSYDGQLHGLLGQYKVNREEE 1064


>gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus]
          Length = 1201

 Score =  130 bits (326), Expect = 2e-28
 Identities = 73/141 (51%), Positives = 86/141 (60%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD SD GAL+E C+ LA++AA AVDFPKTGK  I+P  LKPK YPDFM K + +S
Sbjct: 925  AHVVHADSSDYGALDEKCIILAEKAAAAVDFPKTGKLVIMPSELKPKLYPDFMGKDQHMS 984

Query: 182  YKSEKLLGVLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLK 361
            YKS+K+LG LYR                     I     +D +LE  G   +IA+AWK K
Sbjct: 985  YKSKKILGRLYRRIKDAYDKDIDAPELNYVTGAIP----YDTELEVPGSADFIADAWKQK 1040

Query: 362  CGYDQHLRSLLGQYNVKREGE 424
            C YD  L  LLGQY VKRE E
Sbjct: 1041 CSYDGQLSGLLGQYKVKREEE 1061


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  130 bits (326), Expect = 2e-28
 Identities = 73/142 (51%), Positives = 87/142 (61%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD+S+ GAL+E CL+LA+ AA+AVDFPKTGK   +P  LKPK YPDFM K E  S
Sbjct: 927  AHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQS 986

Query: 182  YKSEKLLGVLYR-XXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKL 358
            YKS+K+LG LYR                 V P+DI     +D  LE +G   +I +AW  
Sbjct: 987  YKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIP----YDTTLEILGSTTFIDDAWNS 1042

Query: 359  KCGYDQHLRSLLGQYNVKREGE 424
            KC YD  L  LLGQY V RE E
Sbjct: 1043 KCSYDGQLNGLLGQYKVNREEE 1064


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  130 bits (326), Expect = 2e-28
 Identities = 73/142 (51%), Positives = 87/142 (61%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD+S+ GAL+E CL+LA+ AA+AVDFPKTGK   +P  LKPK YPDFM K E  S
Sbjct: 927  AHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQS 986

Query: 182  YKSEKLLGVLYR-XXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKL 358
            YKS+K+LG LYR                 V P+DI     +D  LE +G   +I +AW  
Sbjct: 987  YKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIP----YDTTLEILGSTTFIDDAWNS 1042

Query: 359  KCGYDQHLRSLLGQYNVKREGE 424
            KC YD  L  LLGQY V RE E
Sbjct: 1043 KCSYDGQLNGLLGQYKVNREEE 1064


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
            max] gi|571459266|ref|XP_006581359.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
            max]
          Length = 1204

 Score =  129 bits (325), Expect = 3e-28
 Identities = 73/141 (51%), Positives = 84/141 (59%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD SD GAL+E C+ LA+ AA AVDFPKTGK   +P HLKPK YPDFM K    S
Sbjct: 926  AHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKERHQS 985

Query: 182  YKSEKLLGVLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLK 361
            Y+S+K+LG LYR                    DI     +D DLE  G   +IA+AW+ K
Sbjct: 986  YRSKKILGRLYRRIKDAYDEDIDAPYLNFVTGDIP----YDKDLEVPGSADFIADAWEQK 1041

Query: 362  CGYDQHLRSLLGQYNVKREGE 424
            C YD  L  LLGQY VKRE E
Sbjct: 1042 CSYDGQLSGLLGQYKVKREEE 1062


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  129 bits (323), Expect = 5e-28
 Identities = 71/143 (49%), Positives = 86/143 (60%), Gaps = 2/143 (1%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD S  GAL+E+C++L++ AA AVDFPKTGK   +P HLKPK YPDFM K    S
Sbjct: 926  AHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQS 985

Query: 182  YKSEKLLGVLYRXXXXXXXXXXXXXXXXVD--PEDIAKKPCFDADLEFVGYDRYIAEAWK 355
            YKS K+LG +YR                ++  P D+     +D DLE  G + +IAEAW 
Sbjct: 986  YKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVH----YDVDLEVAGAEDFIAEAWD 1041

Query: 356  LKCGYDQHLRSLLGQYNVKREGE 424
             KC YD  L  LLGQY V RE E
Sbjct: 1042 QKCSYDGQLSGLLGQYKVNREEE 1064


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
            gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
            6 [Cucumis sativus]
          Length = 1197

 Score =  129 bits (323), Expect = 5e-28
 Identities = 71/143 (49%), Positives = 86/143 (60%), Gaps = 2/143 (1%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD S  GAL+E+C++L++ AA AVDFPKTGK   +P HLKPK YPDFM K    S
Sbjct: 926  AHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQS 985

Query: 182  YKSEKLLGVLYRXXXXXXXXXXXXXXXXVD--PEDIAKKPCFDADLEFVGYDRYIAEAWK 355
            YKS K+LG +YR                ++  P D+     +D DLE  G + +IAEAW 
Sbjct: 986  YKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVH----YDVDLEVAGAEDFIAEAWD 1041

Query: 356  LKCGYDQHLRSLLGQYNVKREGE 424
             KC YD  L  LLGQY V RE E
Sbjct: 1042 QKCSYDGQLSGLLGQYKVNREEE 1064


>gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris]
          Length = 1204

 Score =  128 bits (322), Expect = 7e-28
 Identities = 71/141 (50%), Positives = 85/141 (60%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD SD  AL+E C+ LA+ AA AVDFPKTGK   +P+HLKPK YPDFM K +  S
Sbjct: 926  AHVVHADSSDYDALDEKCIHLAELAATAVDFPKTGKLVTMPYHLKPKLYPDFMGKEKHQS 985

Query: 182  YKSEKLLGVLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLK 361
            Y+S+K+LG LYR                    DI     +D DLE  G   +IA++W+ K
Sbjct: 986  YRSKKVLGRLYRRIKDAYDEDIDAPYLNFVSGDIP----YDKDLEVPGSSAFIADSWEQK 1041

Query: 362  CGYDQHLRSLLGQYNVKREGE 424
            C YD  L  LLGQY VKRE E
Sbjct: 1042 CAYDGQLSGLLGQYKVKREEE 1062


>gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
          Length = 1197

 Score =  128 bits (322), Expect = 7e-28
 Identities = 74/142 (52%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD+S+ GAL+E C+ LA+ AA AVDFPKTGK   +P +LKPK YPDFM K E  S
Sbjct: 927  AHVVHADLSEYGALDEKCIHLAELAATAVDFPKTGKIVSMPANLKPKLYPDFMGKEEYQS 986

Query: 182  YKSEKLLGVLYR-XXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKL 358
            YKS K+LG LYR                 +D  DI     +D DLE  G   YI +AW  
Sbjct: 987  YKSRKILGRLYRHIKDVYDEDLSESSEINLDSPDIN----YDTDLEVTGSADYIDDAWVK 1042

Query: 359  KCGYDQHLRSLLGQYNVKREGE 424
            KC YD+ L  LLGQY VKRE E
Sbjct: 1043 KCSYDRQLIGLLGQYKVKREEE 1064


>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
            max] gi|571449461|ref|XP_006578148.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
            max]
          Length = 1204

 Score =  128 bits (322), Expect = 7e-28
 Identities = 72/141 (51%), Positives = 83/141 (58%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD SD GAL+E C+ LA+ AA AVDFPKTGK   +P HLKPK YPDFM K    S
Sbjct: 926  AHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKERHQS 985

Query: 182  YKSEKLLGVLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLK 361
            Y+S K+LG LYR                    DI     +D DLE  G   +IA+AW+ K
Sbjct: 986  YRSNKILGRLYRHIKDAYDEDIEAPYLNFVTGDIP----YDKDLEVPGSADFIADAWEQK 1041

Query: 362  CGYDQHLRSLLGQYNVKREGE 424
            C YD  L  L+GQY VKRE E
Sbjct: 1042 CSYDGQLSGLIGQYKVKREEE 1062


>ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago truncatula]
            gi|355492457|gb|AES73660.1| Rna-dependent RNA polymerase
            [Medicago truncatula]
          Length = 1188

 Score =  128 bits (321), Expect = 9e-28
 Identities = 71/141 (50%), Positives = 84/141 (59%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD SD GAL+E+C+ LA+ AA AVDFPKTGK   +P +LKPK YPDFM K    S
Sbjct: 912  AHVVHADSSDYGALDENCVHLAELAATAVDFPKTGKLVTMPSNLKPKLYPDFMGKEHHQS 971

Query: 182  YKSEKLLGVLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLK 361
            YKS+K+LG LYR                    DI     +D DLE  G   +IA+AW+ +
Sbjct: 972  YKSKKILGRLYRRIKDAYDKDIDAPEFNCVSSDI----LYDTDLEVPGSSEFIADAWEQR 1027

Query: 362  CGYDQHLRSLLGQYNVKREGE 424
            C YD  L  LLGQY VK E E
Sbjct: 1028 CSYDGQLSGLLGQYKVKTEEE 1048


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  128 bits (321), Expect = 9e-28
 Identities = 72/142 (50%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2    AHVVRADISDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALS 181
            AHVV AD+S+ GAL+E CL+LA+ AA+AVDFPKTGK   +P  LKPK YPDFM K E  S
Sbjct: 927  AHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQS 986

Query: 182  YKSEKLLGVLYR-XXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKL 358
            YKS+K+LG LYR                 + P DI     +D+ LE  G   +I +AW  
Sbjct: 987  YKSKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIP----YDSSLEIPGSTAFIDDAWNS 1042

Query: 359  KCGYDQHLRSLLGQYNVKREGE 424
            KC YD  L  LLGQY V RE E
Sbjct: 1043 KCSYDGQLHGLLGQYKVNREEE 1064