BLASTX nr result

ID: Ephedra28_contig00019086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00019086
         (415 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006838330.1| hypothetical protein AMTR_s00103p00143950 [A...    55   1e-05

>ref|XP_006838330.1| hypothetical protein AMTR_s00103p00143950 [Amborella trichopoda]
           gi|548840798|gb|ERN00899.1| hypothetical protein
           AMTR_s00103p00143950 [Amborella trichopoda]
          Length = 436

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/68 (35%), Positives = 43/68 (63%)
 Frame = +3

Query: 21  QSSSQDIEIYPGHSTTLLDKKLRVYGGLMPEGRASGNMHMVDLSTIKGGAPGRTQGLQFG 200
           Q  ++ I +  GH    +D+K+ ++GG   +G+ S  ++++D S++KGGAPGRT+GL   
Sbjct: 363 QHCTKSIVLPKGHLVLEMDQKVLIHGGTTEQGKPSNILYVLDASSLKGGAPGRTKGLNIY 422

Query: 201 ILDQNKNG 224
            +D  + G
Sbjct: 423 AIDSVEGG 430


Top