BLASTX nr result
ID: Ephedra28_contig00019074
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00019074
(364 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK26442.1| unknown [Picea sitchensis] 110 2e-22
gb|ABK22863.1| unknown [Picea sitchensis] 99 6e-19
gb|ESW21125.1| hypothetical protein PHAVU_005G043700g [Phaseolus... 98 1e-18
ref|XP_003531466.1| PREDICTED: mediator of RNA polymerase II tra... 95 8e-18
ref|XP_001772523.1| predicted protein [Physcomitrella patens] gi... 93 3e-17
ref|XP_003546670.1| PREDICTED: mediator of RNA polymerase II tra... 93 4e-17
ref|XP_004488603.1| PREDICTED: mediator of RNA polymerase II tra... 91 1e-16
dbj|BAJ85958.1| predicted protein [Hordeum vulgare subsp. vulgare] 91 1e-16
ref|XP_002974954.1| hypothetical protein SELMODRAFT_102574 [Sela... 91 2e-16
ref|XP_002977375.1| hypothetical protein SELMODRAFT_232955 [Sela... 91 2e-16
ref|XP_006826661.1| hypothetical protein AMTR_s00137p00031080 [A... 90 3e-16
ref|XP_002312218.1| surfeit locus protein 5 [Populus trichocarpa... 90 3e-16
ref|XP_001768317.1| predicted protein [Physcomitrella patens] gi... 90 3e-16
ref|XP_006643690.1| PREDICTED: mediator of RNA polymerase II tra... 90 4e-16
ref|XP_006478525.1| PREDICTED: mediator of RNA polymerase II tra... 88 1e-15
ref|XP_006441949.1| hypothetical protein CICLE_v10022715mg [Citr... 88 1e-15
ref|XP_003568074.1| PREDICTED: putative mediator of RNA polymera... 88 1e-15
ref|XP_004968051.1| PREDICTED: mediator of RNA polymerase II tra... 87 2e-15
dbj|BAD09764.1| unknown protein [Oryza sativa Japonica Group] gi... 87 2e-15
ref|NP_001062059.2| Os08g0480500 [Oryza sativa Japonica Group] g... 87 2e-15
>gb|ABK26442.1| unknown [Picea sitchensis]
Length = 159
Score = 110 bits (275), Expect = 2e-22
Identities = 61/98 (62%), Positives = 68/98 (69%), Gaps = 8/98 (8%)
Frame = +3
Query: 93 MNKPGAGIRPGVVGAG--------SGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHL 248
MNKPG G G+ G G SGPT +KQ+ +QRAD DIN ILDNFSHL
Sbjct: 1 MNKPGGG---GLGGTGVGLSAKVPSGPTAAAAQAAAQKQKGLMQRADTDINTILDNFSHL 57
Query: 249 VKAARVNDATYRNSQEALQMDIHASRVVSGADSLLKLV 362
+KAARV+DA +RNSQEA QMDIHASRVV ADSLLKLV
Sbjct: 58 IKAARVSDAPFRNSQEAFQMDIHASRVVQAADSLLKLV 95
>gb|ABK22863.1| unknown [Picea sitchensis]
Length = 159
Score = 99.0 bits (245), Expect = 6e-19
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 8/98 (8%)
Frame = +3
Query: 93 MNKPGAGIRPGVVGAG--------SGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHL 248
MNK G G G+ G G SGPT +KQ+ +QRAD DIN ILDNFS L
Sbjct: 1 MNKLGGG---GLGGTGVGLSAKGPSGPTAAAAQAAAQKQKGLMQRADTDINTILDNFSLL 57
Query: 249 VKAARVNDATYRNSQEALQMDIHASRVVSGADSLLKLV 362
+KAAR++DA +RNSQEA QM+IHASRVV ADSLLK V
Sbjct: 58 IKAARISDAPFRNSQEAFQMEIHASRVVQAADSLLKFV 95
>gb|ESW21125.1| hypothetical protein PHAVU_005G043700g [Phaseolus vulgaris]
Length = 158
Score = 98.2 bits (243), Expect = 1e-18
Identities = 51/90 (56%), Positives = 60/90 (66%)
Frame = +3
Query: 93 MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
MNK G G GAGSGPT +KQ+T LQR + DI I+DNFSHLV ARVND
Sbjct: 1 MNKGGGAGLGGGAGAGSGPTAAAASAAAQKQKTLLQRVEGDIANIVDNFSHLVNVARVND 60
Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
RNSQEA M++H++R+V ADSLLKLV
Sbjct: 61 PPVRNSQEAFMMEMHSARMVQAADSLLKLV 90
>ref|XP_003531466.1| PREDICTED: mediator of RNA polymerase II transcription subunit
22b-like [Glycine max]
Length = 158
Score = 95.1 bits (235), Expect = 8e-18
Identities = 50/90 (55%), Positives = 60/90 (66%)
Frame = +3
Query: 93 MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
MNK AG G GAGSGPT +K++T +QR + DI I+DNFSHLV ARVND
Sbjct: 1 MNKGAAGGLGGGAGAGSGPTAAAAAAAAQKRKTLVQRVEGDIANIVDNFSHLVNVARVND 60
Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
RNSQEA M++ A+R+V ADSLLKLV
Sbjct: 61 PLVRNSQEAFMMEMRAARMVQAADSLLKLV 90
>ref|XP_001772523.1| predicted protein [Physcomitrella patens]
gi|162676078|gb|EDQ62565.1| predicted protein
[Physcomitrella patens]
Length = 138
Score = 93.2 bits (230), Expect = 3e-17
Identities = 47/77 (61%), Positives = 58/77 (75%)
Frame = +3
Query: 132 GAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVNDATYRNSQEALQMD 311
G +GPT ++QR+ LQRADADI ++LDNFSHL+KAAR+ND RN QEA QM+
Sbjct: 1 GGVAGPTAAAAAQAAQRQRSLLQRADADIGSLLDNFSHLLKAARINDPV-RNGQEAFQME 59
Query: 312 IHASRVVSGADSLLKLV 362
+HA+RVV ADSLLKLV
Sbjct: 60 VHAARVVQAADSLLKLV 76
>ref|XP_003546670.1| PREDICTED: mediator of RNA polymerase II transcription subunit
22b-like isoform X1 [Glycine max]
gi|571520655|ref|XP_006598035.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 22b-like isoform
X2 [Glycine max]
Length = 156
Score = 92.8 bits (229), Expect = 4e-17
Identities = 51/90 (56%), Positives = 60/90 (66%)
Frame = +3
Query: 93 MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
MNK AG G GAGSGPT +KQ+T LQR + DI I+DNF+HLV ARVND
Sbjct: 1 MNKGAAGGLGG--GAGSGPTAAAAAAAAQKQKTLLQRVEGDIANIVDNFNHLVNVARVND 58
Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
RNSQEA M++ A+R+V ADSLLKLV
Sbjct: 59 PPVRNSQEAFMMEMRAARMVQAADSLLKLV 88
>ref|XP_004488603.1| PREDICTED: mediator of RNA polymerase II transcription subunit
22a-like isoform X1 [Cicer arietinum]
gi|502087665|ref|XP_004488604.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 22a-like isoform
X2 [Cicer arietinum]
Length = 150
Score = 91.3 bits (225), Expect = 1e-16
Identities = 50/90 (55%), Positives = 57/90 (63%)
Frame = +3
Query: 93 MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
MNK G G G GPT +KQ+T LQR D DI I+DNFSHLV ARVND
Sbjct: 1 MNKGGPG--------GGGPTAAAAAAAAQKQKTLLQRVDGDIANIVDNFSHLVNVARVND 52
Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
RNSQEA M++ A+R+V GADSLLKLV
Sbjct: 53 PPVRNSQEAFMMEMRAARMVQGADSLLKLV 82
>dbj|BAJ85958.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 152
Score = 91.3 bits (225), Expect = 1e-16
Identities = 49/90 (54%), Positives = 60/90 (66%)
Frame = +3
Query: 93 MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
M+KPG GA +GPT +KQR LQ+ADAD+ +++DNFS L+ ARVND
Sbjct: 1 MSKPGGSAG----GAMAGPTAAAAAAAAQKQRALLQKADADVGSLVDNFSALINIARVND 56
Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
RNSQEA QMD+ ASR+V ADSLLKLV
Sbjct: 57 PPVRNSQEAFQMDMRASRMVHSADSLLKLV 86
>ref|XP_002974954.1| hypothetical protein SELMODRAFT_102574 [Selaginella moellendorffii]
gi|300157113|gb|EFJ23739.1| hypothetical protein
SELMODRAFT_102574 [Selaginella moellendorffii]
Length = 155
Score = 90.5 bits (223), Expect = 2e-16
Identities = 51/90 (56%), Positives = 59/90 (65%)
Frame = +3
Query: 93 MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
MNKPG G G + T +QR LQRADADI ++DNF+H++KAARVND
Sbjct: 1 MNKPGQG-----GGGAAATTAAAAAATIHRQRALLQRADADIANLIDNFAHMLKAARVND 55
Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
RN+QE QMDIHASRVV ADSLLKLV
Sbjct: 56 PV-RNAQENFQMDIHASRVVQAADSLLKLV 84
>ref|XP_002977375.1| hypothetical protein SELMODRAFT_232955 [Selaginella moellendorffii]
gi|300154745|gb|EFJ21379.1| hypothetical protein
SELMODRAFT_232955 [Selaginella moellendorffii]
Length = 155
Score = 90.5 bits (223), Expect = 2e-16
Identities = 51/90 (56%), Positives = 59/90 (65%)
Frame = +3
Query: 93 MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
MNKPG G G + T +QR LQRADADI ++DNF+H++KAARVND
Sbjct: 1 MNKPGQG-----GGGAAATTAAAAAATIHRQRALLQRADADIANLIDNFAHMLKAARVND 55
Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
RN+QE QMDIHASRVV ADSLLKLV
Sbjct: 56 PV-RNAQENFQMDIHASRVVQAADSLLKLV 84
>ref|XP_006826661.1| hypothetical protein AMTR_s00137p00031080 [Amborella trichopoda]
gi|548831062|gb|ERM93898.1| hypothetical protein
AMTR_s00137p00031080 [Amborella trichopoda]
Length = 162
Score = 90.1 bits (222), Expect = 3e-16
Identities = 51/95 (53%), Positives = 63/95 (66%), Gaps = 5/95 (5%)
Frame = +3
Query: 93 MNK--PGAGIRPG---VVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKA 257
MNK G G+ G V G+ +GPT +KQ+T LQR D DIN ++DNF+ LV
Sbjct: 1 MNKGVSGGGLGGGAGAVGGSAAGPTATAAAIAAQKQKTLLQRVDTDINNMVDNFNFLVDV 60
Query: 258 ARVNDATYRNSQEALQMDIHASRVVSGADSLLKLV 362
ARV+D +RNSQEA QM+I A+RVV ADSLLKLV
Sbjct: 61 ARVSDQPFRNSQEAFQMEIRAARVVQAADSLLKLV 95
>ref|XP_002312218.1| surfeit locus protein 5 [Populus trichocarpa]
gi|222852038|gb|EEE89585.1| surfeit locus protein 5
[Populus trichocarpa]
Length = 158
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/90 (51%), Positives = 57/90 (63%)
Frame = +3
Query: 93 MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
MNK G G G GSGPT +KQ+ +QR + DI I+DNF+HLV AR+ND
Sbjct: 1 MNKAGGIAMGGGGGVGSGPTTAAAAAAAQKQKALMQRVETDIAHIVDNFTHLVNVARIND 60
Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
RNSQEA M++ A+R+V ADSLLKLV
Sbjct: 61 TPVRNSQEAFMMEMRAARMVQAADSLLKLV 90
>ref|XP_001768317.1| predicted protein [Physcomitrella patens]
gi|162680495|gb|EDQ66931.1| predicted protein
[Physcomitrella patens]
Length = 138
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/77 (59%), Positives = 57/77 (74%)
Frame = +3
Query: 132 GAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVNDATYRNSQEALQMD 311
G GPT ++QR+ LQRAD+DI +LDNFSHL+KAAR+ND RN+QEA QM+
Sbjct: 1 GGVVGPTAAASAQAAQRQRSLLQRADSDIGILLDNFSHLLKAARINDPV-RNAQEAFQME 59
Query: 312 IHASRVVSGADSLLKLV 362
+HASRVV ADSLL+LV
Sbjct: 60 VHASRVVQAADSLLQLV 76
>ref|XP_006643690.1| PREDICTED: mediator of RNA polymerase II transcription subunit
22a-like [Oryza brachyantha]
Length = 151
Score = 89.7 bits (221), Expect = 4e-16
Identities = 49/80 (61%), Positives = 62/80 (77%)
Frame = +3
Query: 123 GVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVNDATYRNSQEAL 302
G GA +GPT +KQ+T LQ+ADAD+++++DNFS L+ ARVND RNSQEA
Sbjct: 6 GNAGAAAGPTAXXXXXAVQKQKTLLQKADADVSSLVDNFSALINIARVNDPPVRNSQEAF 65
Query: 303 QMDIHASRVVSGADSLLKLV 362
QMD+ +R+V ADSLLKLV
Sbjct: 66 QMDMRGARMVHSADSLLKLV 85
>ref|XP_006478525.1| PREDICTED: mediator of RNA polymerase II transcription subunit
22b-like isoform X1 [Citrus sinensis]
gi|568849577|ref|XP_006478526.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 22b-like isoform
X2 [Citrus sinensis]
Length = 148
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/77 (57%), Positives = 54/77 (70%)
Frame = +3
Query: 132 GAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVNDATYRNSQEALQMD 311
GAGSGPT +KQ+T +QR + DI +I+DNFS LV ARVND RNSQE+ M+
Sbjct: 4 GAGSGPTAAAAAAAAQKQKTLMQRVETDIASIVDNFSQLVNVARVNDPPVRNSQESFMME 63
Query: 312 IHASRVVSGADSLLKLV 362
+ ASR+V ADSLLKLV
Sbjct: 64 MRASRMVQAADSLLKLV 80
>ref|XP_006441949.1| hypothetical protein CICLE_v10022715mg [Citrus clementina]
gi|557544211|gb|ESR55189.1| hypothetical protein
CICLE_v10022715mg [Citrus clementina]
Length = 148
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/77 (57%), Positives = 54/77 (70%)
Frame = +3
Query: 132 GAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVNDATYRNSQEALQMD 311
GAGSGPT +KQ+T +QR + DI +I+DNFS LV ARVND RNSQE+ M+
Sbjct: 4 GAGSGPTAAAAAAAAQKQKTLMQRVETDIASIVDNFSQLVNVARVNDPPVRNSQESFMME 63
Query: 312 IHASRVVSGADSLLKLV 362
+ ASR+V ADSLLKLV
Sbjct: 64 MRASRMVQAADSLLKLV 80
>ref|XP_003568074.1| PREDICTED: putative mediator of RNA polymerase II transcription
subunit 22-like [Brachypodium distachyon]
Length = 151
Score = 87.8 bits (216), Expect = 1e-15
Identities = 47/90 (52%), Positives = 60/90 (66%)
Frame = +3
Query: 93 MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
M+K G G GA +GPT +KQR LQ+ADAD+ +++DNFS L+ ARVND
Sbjct: 1 MSKAGGG-----GGAAAGPTAAAAAAAAQKQRALLQKADADVASLVDNFSALINIARVND 55
Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
RN+QEA QM++ ASR+V ADSLLKLV
Sbjct: 56 PPVRNTQEAFQMEMRASRMVHSADSLLKLV 85
>ref|XP_004968051.1| PREDICTED: mediator of RNA polymerase II transcription subunit
22a-like [Setaria italica]
Length = 151
Score = 87.4 bits (215), Expect = 2e-15
Identities = 45/90 (50%), Positives = 61/90 (67%)
Frame = +3
Query: 93 MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
M+K G G G+ GPT +KQ++ LQ+ADAD+++++DNFS L+ ARVND
Sbjct: 1 MSKVGGG-----AGSAPGPTAAAAAAAVQKQKSLLQKADADVSSLVDNFSSLINIARVND 55
Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
RNSQEA QM++ A+R+V ADSLLKLV
Sbjct: 56 PPVRNSQEAFQMEMRAARMVHSADSLLKLV 85
>dbj|BAD09764.1| unknown protein [Oryza sativa Japonica Group]
gi|42409021|dbj|BAD10274.1| unknown protein [Oryza
sativa Japonica Group] gi|125561926|gb|EAZ07374.1|
hypothetical protein OsI_29625 [Oryza sativa Indica
Group] gi|125603775|gb|EAZ43100.1| hypothetical protein
OsJ_27691 [Oryza sativa Japonica Group]
gi|215767831|dbj|BAH00060.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 148
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = +3
Query: 132 GAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVNDATYRNSQEALQMD 311
GA +GPT +KQ+T LQ+ADAD+++++DNF+ L+ ARVND RN+QEA QMD
Sbjct: 6 GAAAGPTAAAAAAAVQKQKTLLQKADADVSSLVDNFAALINIARVNDPPVRNTQEAFQMD 65
Query: 312 IHASRVVSGADSLLKLV 362
+ SR+V ADSLLKLV
Sbjct: 66 MRGSRMVHSADSLLKLV 82
>ref|NP_001062059.2| Os08g0480500 [Oryza sativa Japonica Group]
gi|255678534|dbj|BAF23973.2| Os08g0480500, partial
[Oryza sativa Japonica Group]
Length = 178
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = +3
Query: 132 GAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVNDATYRNSQEALQMD 311
GA +GPT +KQ+T LQ+ADAD+++++DNF+ L+ ARVND RN+QEA QMD
Sbjct: 36 GAAAGPTAAAAAAAVQKQKTLLQKADADVSSLVDNFAALINIARVNDPPVRNTQEAFQMD 95
Query: 312 IHASRVVSGADSLLKLV 362
+ SR+V ADSLLKLV
Sbjct: 96 MRGSRMVHSADSLLKLV 112