BLASTX nr result

ID: Ephedra28_contig00019074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00019074
         (364 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26442.1| unknown [Picea sitchensis]                             110   2e-22
gb|ABK22863.1| unknown [Picea sitchensis]                              99   6e-19
gb|ESW21125.1| hypothetical protein PHAVU_005G043700g [Phaseolus...    98   1e-18
ref|XP_003531466.1| PREDICTED: mediator of RNA polymerase II tra...    95   8e-18
ref|XP_001772523.1| predicted protein [Physcomitrella patens] gi...    93   3e-17
ref|XP_003546670.1| PREDICTED: mediator of RNA polymerase II tra...    93   4e-17
ref|XP_004488603.1| PREDICTED: mediator of RNA polymerase II tra...    91   1e-16
dbj|BAJ85958.1| predicted protein [Hordeum vulgare subsp. vulgare]     91   1e-16
ref|XP_002974954.1| hypothetical protein SELMODRAFT_102574 [Sela...    91   2e-16
ref|XP_002977375.1| hypothetical protein SELMODRAFT_232955 [Sela...    91   2e-16
ref|XP_006826661.1| hypothetical protein AMTR_s00137p00031080 [A...    90   3e-16
ref|XP_002312218.1| surfeit locus protein 5 [Populus trichocarpa...    90   3e-16
ref|XP_001768317.1| predicted protein [Physcomitrella patens] gi...    90   3e-16
ref|XP_006643690.1| PREDICTED: mediator of RNA polymerase II tra...    90   4e-16
ref|XP_006478525.1| PREDICTED: mediator of RNA polymerase II tra...    88   1e-15
ref|XP_006441949.1| hypothetical protein CICLE_v10022715mg [Citr...    88   1e-15
ref|XP_003568074.1| PREDICTED: putative mediator of RNA polymera...    88   1e-15
ref|XP_004968051.1| PREDICTED: mediator of RNA polymerase II tra...    87   2e-15
dbj|BAD09764.1| unknown protein [Oryza sativa Japonica Group] gi...    87   2e-15
ref|NP_001062059.2| Os08g0480500 [Oryza sativa Japonica Group] g...    87   2e-15

>gb|ABK26442.1| unknown [Picea sitchensis]
          Length = 159

 Score =  110 bits (275), Expect = 2e-22
 Identities = 61/98 (62%), Positives = 68/98 (69%), Gaps = 8/98 (8%)
 Frame = +3

Query: 93  MNKPGAGIRPGVVGAG--------SGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHL 248
           MNKPG G   G+ G G        SGPT        +KQ+  +QRAD DIN ILDNFSHL
Sbjct: 1   MNKPGGG---GLGGTGVGLSAKVPSGPTAAAAQAAAQKQKGLMQRADTDINTILDNFSHL 57

Query: 249 VKAARVNDATYRNSQEALQMDIHASRVVSGADSLLKLV 362
           +KAARV+DA +RNSQEA QMDIHASRVV  ADSLLKLV
Sbjct: 58  IKAARVSDAPFRNSQEAFQMDIHASRVVQAADSLLKLV 95


>gb|ABK22863.1| unknown [Picea sitchensis]
          Length = 159

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 8/98 (8%)
 Frame = +3

Query: 93  MNKPGAGIRPGVVGAG--------SGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHL 248
           MNK G G   G+ G G        SGPT        +KQ+  +QRAD DIN ILDNFS L
Sbjct: 1   MNKLGGG---GLGGTGVGLSAKGPSGPTAAAAQAAAQKQKGLMQRADTDINTILDNFSLL 57

Query: 249 VKAARVNDATYRNSQEALQMDIHASRVVSGADSLLKLV 362
           +KAAR++DA +RNSQEA QM+IHASRVV  ADSLLK V
Sbjct: 58  IKAARISDAPFRNSQEAFQMEIHASRVVQAADSLLKFV 95


>gb|ESW21125.1| hypothetical protein PHAVU_005G043700g [Phaseolus vulgaris]
          Length = 158

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 51/90 (56%), Positives = 60/90 (66%)
 Frame = +3

Query: 93  MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
           MNK G     G  GAGSGPT        +KQ+T LQR + DI  I+DNFSHLV  ARVND
Sbjct: 1   MNKGGGAGLGGGAGAGSGPTAAAASAAAQKQKTLLQRVEGDIANIVDNFSHLVNVARVND 60

Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
              RNSQEA  M++H++R+V  ADSLLKLV
Sbjct: 61  PPVRNSQEAFMMEMHSARMVQAADSLLKLV 90


>ref|XP_003531466.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           22b-like [Glycine max]
          Length = 158

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 50/90 (55%), Positives = 60/90 (66%)
 Frame = +3

Query: 93  MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
           MNK  AG   G  GAGSGPT        +K++T +QR + DI  I+DNFSHLV  ARVND
Sbjct: 1   MNKGAAGGLGGGAGAGSGPTAAAAAAAAQKRKTLVQRVEGDIANIVDNFSHLVNVARVND 60

Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
              RNSQEA  M++ A+R+V  ADSLLKLV
Sbjct: 61  PLVRNSQEAFMMEMRAARMVQAADSLLKLV 90


>ref|XP_001772523.1| predicted protein [Physcomitrella patens]
           gi|162676078|gb|EDQ62565.1| predicted protein
           [Physcomitrella patens]
          Length = 138

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 47/77 (61%), Positives = 58/77 (75%)
 Frame = +3

Query: 132 GAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVNDATYRNSQEALQMD 311
           G  +GPT        ++QR+ LQRADADI ++LDNFSHL+KAAR+ND   RN QEA QM+
Sbjct: 1   GGVAGPTAAAAAQAAQRQRSLLQRADADIGSLLDNFSHLLKAARINDPV-RNGQEAFQME 59

Query: 312 IHASRVVSGADSLLKLV 362
           +HA+RVV  ADSLLKLV
Sbjct: 60  VHAARVVQAADSLLKLV 76


>ref|XP_003546670.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           22b-like isoform X1 [Glycine max]
           gi|571520655|ref|XP_006598035.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 22b-like isoform
           X2 [Glycine max]
          Length = 156

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 51/90 (56%), Positives = 60/90 (66%)
 Frame = +3

Query: 93  MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
           MNK  AG   G  GAGSGPT        +KQ+T LQR + DI  I+DNF+HLV  ARVND
Sbjct: 1   MNKGAAGGLGG--GAGSGPTAAAAAAAAQKQKTLLQRVEGDIANIVDNFNHLVNVARVND 58

Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
              RNSQEA  M++ A+R+V  ADSLLKLV
Sbjct: 59  PPVRNSQEAFMMEMRAARMVQAADSLLKLV 88


>ref|XP_004488603.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           22a-like isoform X1 [Cicer arietinum]
           gi|502087665|ref|XP_004488604.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 22a-like isoform
           X2 [Cicer arietinum]
          Length = 150

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 50/90 (55%), Positives = 57/90 (63%)
 Frame = +3

Query: 93  MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
           MNK G G        G GPT        +KQ+T LQR D DI  I+DNFSHLV  ARVND
Sbjct: 1   MNKGGPG--------GGGPTAAAAAAAAQKQKTLLQRVDGDIANIVDNFSHLVNVARVND 52

Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
              RNSQEA  M++ A+R+V GADSLLKLV
Sbjct: 53  PPVRNSQEAFMMEMRAARMVQGADSLLKLV 82


>dbj|BAJ85958.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 152

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 49/90 (54%), Positives = 60/90 (66%)
 Frame = +3

Query: 93  MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
           M+KPG        GA +GPT        +KQR  LQ+ADAD+ +++DNFS L+  ARVND
Sbjct: 1   MSKPGGSAG----GAMAGPTAAAAAAAAQKQRALLQKADADVGSLVDNFSALINIARVND 56

Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
              RNSQEA QMD+ ASR+V  ADSLLKLV
Sbjct: 57  PPVRNSQEAFQMDMRASRMVHSADSLLKLV 86


>ref|XP_002974954.1| hypothetical protein SELMODRAFT_102574 [Selaginella moellendorffii]
           gi|300157113|gb|EFJ23739.1| hypothetical protein
           SELMODRAFT_102574 [Selaginella moellendorffii]
          Length = 155

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 51/90 (56%), Positives = 59/90 (65%)
 Frame = +3

Query: 93  MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
           MNKPG G      G  +  T         +QR  LQRADADI  ++DNF+H++KAARVND
Sbjct: 1   MNKPGQG-----GGGAAATTAAAAAATIHRQRALLQRADADIANLIDNFAHMLKAARVND 55

Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
              RN+QE  QMDIHASRVV  ADSLLKLV
Sbjct: 56  PV-RNAQENFQMDIHASRVVQAADSLLKLV 84


>ref|XP_002977375.1| hypothetical protein SELMODRAFT_232955 [Selaginella moellendorffii]
           gi|300154745|gb|EFJ21379.1| hypothetical protein
           SELMODRAFT_232955 [Selaginella moellendorffii]
          Length = 155

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 51/90 (56%), Positives = 59/90 (65%)
 Frame = +3

Query: 93  MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
           MNKPG G      G  +  T         +QR  LQRADADI  ++DNF+H++KAARVND
Sbjct: 1   MNKPGQG-----GGGAAATTAAAAAATIHRQRALLQRADADIANLIDNFAHMLKAARVND 55

Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
              RN+QE  QMDIHASRVV  ADSLLKLV
Sbjct: 56  PV-RNAQENFQMDIHASRVVQAADSLLKLV 84


>ref|XP_006826661.1| hypothetical protein AMTR_s00137p00031080 [Amborella trichopoda]
           gi|548831062|gb|ERM93898.1| hypothetical protein
           AMTR_s00137p00031080 [Amborella trichopoda]
          Length = 162

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 51/95 (53%), Positives = 63/95 (66%), Gaps = 5/95 (5%)
 Frame = +3

Query: 93  MNK--PGAGIRPG---VVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKA 257
           MNK   G G+  G   V G+ +GPT        +KQ+T LQR D DIN ++DNF+ LV  
Sbjct: 1   MNKGVSGGGLGGGAGAVGGSAAGPTATAAAIAAQKQKTLLQRVDTDINNMVDNFNFLVDV 60

Query: 258 ARVNDATYRNSQEALQMDIHASRVVSGADSLLKLV 362
           ARV+D  +RNSQEA QM+I A+RVV  ADSLLKLV
Sbjct: 61  ARVSDQPFRNSQEAFQMEIRAARVVQAADSLLKLV 95


>ref|XP_002312218.1| surfeit locus protein 5 [Populus trichocarpa]
           gi|222852038|gb|EEE89585.1| surfeit locus protein 5
           [Populus trichocarpa]
          Length = 158

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 46/90 (51%), Positives = 57/90 (63%)
 Frame = +3

Query: 93  MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
           MNK G     G  G GSGPT        +KQ+  +QR + DI  I+DNF+HLV  AR+ND
Sbjct: 1   MNKAGGIAMGGGGGVGSGPTTAAAAAAAQKQKALMQRVETDIAHIVDNFTHLVNVARIND 60

Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
              RNSQEA  M++ A+R+V  ADSLLKLV
Sbjct: 61  TPVRNSQEAFMMEMRAARMVQAADSLLKLV 90


>ref|XP_001768317.1| predicted protein [Physcomitrella patens]
           gi|162680495|gb|EDQ66931.1| predicted protein
           [Physcomitrella patens]
          Length = 138

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 46/77 (59%), Positives = 57/77 (74%)
 Frame = +3

Query: 132 GAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVNDATYRNSQEALQMD 311
           G   GPT        ++QR+ LQRAD+DI  +LDNFSHL+KAAR+ND   RN+QEA QM+
Sbjct: 1   GGVVGPTAAASAQAAQRQRSLLQRADSDIGILLDNFSHLLKAARINDPV-RNAQEAFQME 59

Query: 312 IHASRVVSGADSLLKLV 362
           +HASRVV  ADSLL+LV
Sbjct: 60  VHASRVVQAADSLLQLV 76


>ref|XP_006643690.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           22a-like [Oryza brachyantha]
          Length = 151

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 49/80 (61%), Positives = 62/80 (77%)
 Frame = +3

Query: 123 GVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVNDATYRNSQEAL 302
           G  GA +GPT        +KQ+T LQ+ADAD+++++DNFS L+  ARVND   RNSQEA 
Sbjct: 6   GNAGAAAGPTAXXXXXAVQKQKTLLQKADADVSSLVDNFSALINIARVNDPPVRNSQEAF 65

Query: 303 QMDIHASRVVSGADSLLKLV 362
           QMD+  +R+V  ADSLLKLV
Sbjct: 66  QMDMRGARMVHSADSLLKLV 85


>ref|XP_006478525.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           22b-like isoform X1 [Citrus sinensis]
           gi|568849577|ref|XP_006478526.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 22b-like isoform
           X2 [Citrus sinensis]
          Length = 148

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 44/77 (57%), Positives = 54/77 (70%)
 Frame = +3

Query: 132 GAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVNDATYRNSQEALQMD 311
           GAGSGPT        +KQ+T +QR + DI +I+DNFS LV  ARVND   RNSQE+  M+
Sbjct: 4   GAGSGPTAAAAAAAAQKQKTLMQRVETDIASIVDNFSQLVNVARVNDPPVRNSQESFMME 63

Query: 312 IHASRVVSGADSLLKLV 362
           + ASR+V  ADSLLKLV
Sbjct: 64  MRASRMVQAADSLLKLV 80


>ref|XP_006441949.1| hypothetical protein CICLE_v10022715mg [Citrus clementina]
           gi|557544211|gb|ESR55189.1| hypothetical protein
           CICLE_v10022715mg [Citrus clementina]
          Length = 148

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 44/77 (57%), Positives = 54/77 (70%)
 Frame = +3

Query: 132 GAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVNDATYRNSQEALQMD 311
           GAGSGPT        +KQ+T +QR + DI +I+DNFS LV  ARVND   RNSQE+  M+
Sbjct: 4   GAGSGPTAAAAAAAAQKQKTLMQRVETDIASIVDNFSQLVNVARVNDPPVRNSQESFMME 63

Query: 312 IHASRVVSGADSLLKLV 362
           + ASR+V  ADSLLKLV
Sbjct: 64  MRASRMVQAADSLLKLV 80


>ref|XP_003568074.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 22-like [Brachypodium distachyon]
          Length = 151

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 47/90 (52%), Positives = 60/90 (66%)
 Frame = +3

Query: 93  MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
           M+K G G      GA +GPT        +KQR  LQ+ADAD+ +++DNFS L+  ARVND
Sbjct: 1   MSKAGGG-----GGAAAGPTAAAAAAAAQKQRALLQKADADVASLVDNFSALINIARVND 55

Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
              RN+QEA QM++ ASR+V  ADSLLKLV
Sbjct: 56  PPVRNTQEAFQMEMRASRMVHSADSLLKLV 85


>ref|XP_004968051.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           22a-like [Setaria italica]
          Length = 151

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 45/90 (50%), Positives = 61/90 (67%)
 Frame = +3

Query: 93  MNKPGAGIRPGVVGAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVND 272
           M+K G G      G+  GPT        +KQ++ LQ+ADAD+++++DNFS L+  ARVND
Sbjct: 1   MSKVGGG-----AGSAPGPTAAAAAAAVQKQKSLLQKADADVSSLVDNFSSLINIARVND 55

Query: 273 ATYRNSQEALQMDIHASRVVSGADSLLKLV 362
              RNSQEA QM++ A+R+V  ADSLLKLV
Sbjct: 56  PPVRNSQEAFQMEMRAARMVHSADSLLKLV 85


>dbj|BAD09764.1| unknown protein [Oryza sativa Japonica Group]
           gi|42409021|dbj|BAD10274.1| unknown protein [Oryza
           sativa Japonica Group] gi|125561926|gb|EAZ07374.1|
           hypothetical protein OsI_29625 [Oryza sativa Indica
           Group] gi|125603775|gb|EAZ43100.1| hypothetical protein
           OsJ_27691 [Oryza sativa Japonica Group]
           gi|215767831|dbj|BAH00060.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 148

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 42/77 (54%), Positives = 56/77 (72%)
 Frame = +3

Query: 132 GAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVNDATYRNSQEALQMD 311
           GA +GPT        +KQ+T LQ+ADAD+++++DNF+ L+  ARVND   RN+QEA QMD
Sbjct: 6   GAAAGPTAAAAAAAVQKQKTLLQKADADVSSLVDNFAALINIARVNDPPVRNTQEAFQMD 65

Query: 312 IHASRVVSGADSLLKLV 362
           +  SR+V  ADSLLKLV
Sbjct: 66  MRGSRMVHSADSLLKLV 82


>ref|NP_001062059.2| Os08g0480500 [Oryza sativa Japonica Group]
           gi|255678534|dbj|BAF23973.2| Os08g0480500, partial
           [Oryza sativa Japonica Group]
          Length = 178

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 42/77 (54%), Positives = 56/77 (72%)
 Frame = +3

Query: 132 GAGSGPTXXXXXXXXEKQRTFLQRADADINAILDNFSHLVKAARVNDATYRNSQEALQMD 311
           GA +GPT        +KQ+T LQ+ADAD+++++DNF+ L+  ARVND   RN+QEA QMD
Sbjct: 36  GAAAGPTAAAAAAAVQKQKTLLQKADADVSSLVDNFAALINIARVNDPPVRNTQEAFQMD 95

Query: 312 IHASRVVSGADSLLKLV 362
           +  SR+V  ADSLLKLV
Sbjct: 96  MRGSRMVHSADSLLKLV 112


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