BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00019062
         (775 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC69277.1| hypothetical protein OsI_38328 [Oryza sativa Indi...    60   8e-07
sp|Q0INC5.2|RH28_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ...    59   2e-06
ref|NP_001066771.1| Os12g0481100 [Oryza sativa Japonica Group] g...    59   2e-06
ref|XP_003576183.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   5e-06
ref|XP_003576182.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   5e-06
ref|XP_006286159.1| hypothetical protein CARUB_v10007717mg [Caps...    57   9e-06

>gb|EEC69277.1| hypothetical protein OsI_38328 [Oryza sativa Indica Group]
          Length = 802

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 12/110 (10%)
 Frame = +3

Query: 360 WEFSGYSRTVAEEHAKRNTTSIDDKIS-SQRSHRR-----LP------DREDEECYRASK 503
           WEFS Y+ +VA EHA+R TTSID+KIS + R  RR     +P      D +D E    S+
Sbjct: 33  WEFSSYAESVAAEHARRRTTSIDEKISQALRGSRRGGKPSIPDGDSEGDEDDSEVEDDSE 92

Query: 504 IDEEKIIRVQNSKKIENKKQEVQNSKIDVKRIEKKNVKSDEIEDDMPLQK 653
            D+++++      +IE+++ EV+ S+ D + +E  + + +E+E+    +K
Sbjct: 93  EDDKEVV----EGEIEDEEDEVEESEDDDEGVEVSDEEVEELEEGQGEEK 138


>sp|Q0INC5.2|RH28_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 28
           gi|77555691|gb|ABA98487.1| DEAD/DEAH box helicase family
           protein, expressed [Oryza sativa Japonica Group]
           gi|125579336|gb|EAZ20482.1| hypothetical protein
           OsJ_36091 [Oryza sativa Japonica Group]
           gi|215706455|dbj|BAG93311.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 802

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 35/104 (33%), Positives = 61/104 (58%), Gaps = 12/104 (11%)
 Frame = +3

Query: 360 WEFSGYSRTVAEEHAKRNTTSIDDKISSQRSHRR------LP------DREDEECYRASK 503
           WEFS Y+ +VA EHA+R TTSID+KIS   S  R      +P      D +D E    S+
Sbjct: 33  WEFSSYAESVAAEHARRRTTSIDEKISQALSGSRRGGKPSIPDGDSEGDEDDSEVEDDSE 92

Query: 504 IDEEKIIRVQNSKKIENKKQEVQNSKIDVKRIEKKNVKSDEIED 635
            D+++++      +I++++ EV+ S+ D + +E  + + +E+E+
Sbjct: 93  EDDKEVV----EGEIDDEEDEVEESEDDDEGVEVSDEEVEELEE 132


>ref|NP_001066771.1| Os12g0481100 [Oryza sativa Japonica Group]
           gi|113649278|dbj|BAF29790.1| Os12g0481100, partial
           [Oryza sativa Japonica Group]
          Length = 832

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 35/104 (33%), Positives = 61/104 (58%), Gaps = 12/104 (11%)
 Frame = +3

Query: 360 WEFSGYSRTVAEEHAKRNTTSIDDKISSQRSHRR------LP------DREDEECYRASK 503
           WEFS Y+ +VA EHA+R TTSID+KIS   S  R      +P      D +D E    S+
Sbjct: 63  WEFSSYAESVAAEHARRRTTSIDEKISQALSGSRRGGKPSIPDGDSEGDEDDSEVEDDSE 122

Query: 504 IDEEKIIRVQNSKKIENKKQEVQNSKIDVKRIEKKNVKSDEIED 635
            D+++++      +I++++ EV+ S+ D + +E  + + +E+E+
Sbjct: 123 EDDKEVV----EGEIDDEEDEVEESEDDDEGVEVSDEEVEELEE 162


>ref|XP_003576183.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like isoform 2
           [Brachypodium distachyon]
          Length = 770

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 16/109 (14%)
 Frame = +3

Query: 360 WEFSGYSRTVAEEHAKRNTTSIDDKISSQRSHRRLPDR---------------EDEECYR 494
           WEFS Y+ +VA EHA+R TTSID+KIS     RR P R                DEE  +
Sbjct: 30  WEFSSYTESVAAEHARRRTTSIDEKISQALRGRRNPSRPYGSDGEEEEEDADDSDEEPVK 89

Query: 495 ASKIDEEKIIRVQN-SKKIENKKQEVQNSKIDVKRIEKKNVKSDEIEDD 638
               DEE+ +   +  + IE   +E +  + D +  E++  + +E E+D
Sbjct: 90  GETGDEEEELEESDGDEDIEESDEEEEVKEGDSEEKEEEQGEEEEEEED 138


>ref|XP_003576182.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like isoform 1
           [Brachypodium distachyon]
          Length = 780

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 16/109 (14%)
 Frame = +3

Query: 360 WEFSGYSRTVAEEHAKRNTTSIDDKISSQRSHRRLPDR---------------EDEECYR 494
           WEFS Y+ +VA EHA+R TTSID+KIS     RR P R                DEE  +
Sbjct: 30  WEFSSYTESVAAEHARRRTTSIDEKISQALRGRRNPSRPYGSDGEEEEEDADDSDEEPVK 89

Query: 495 ASKIDEEKIIRVQN-SKKIENKKQEVQNSKIDVKRIEKKNVKSDEIEDD 638
               DEE+ +   +  + IE   +E +  + D +  E++  + +E E+D
Sbjct: 90  GETGDEEEELEESDGDEDIEESDEEEEVKEGDSEEKEEEQGEEEEEEED 138


>ref|XP_006286159.1| hypothetical protein CARUB_v10007717mg [Capsella rubella]
           gi|482554864|gb|EOA19057.1| hypothetical protein
           CARUB_v10007717mg [Capsella rubella]
          Length = 795

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
 Frame = +3

Query: 360 WEFSGYSRTVAEEHAKRNTTSIDDKISSQRSHRRLP---DREDEECYRASKIDEEKIIRV 530
           W+F+ YS +V EEHA+R+TTSID+KIS    HR +P   D EDEE       +EE+    
Sbjct: 74  WDFASYSSSVGEEHARRHTTSIDEKISKAIQHRPVPISIDEEDEE-------EEEEEEEE 126

Query: 531 QNSKKIENKKQEVQNSKID 587
            +    E  KQE   S+ D
Sbjct: 127 ADDSGAEADKQEEYLSEDD 145