BLASTX nr result

ID: Ephedra28_contig00019036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00019036
         (459 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC99473.1| germin-like protein [Pinus caribaea]                    56   6e-06
gb|AAC05146.1| germin-like protein [Pinus radiata]                     55   7e-06
gb|AAT09853.1| germin-like protein [Pinus taeda]                       55   1e-05

>gb|AAC99473.1| germin-like protein [Pinus caribaea]
          Length = 220

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = -3

Query: 451 HNHPRKL*SIFVSHGIVNAVF-DT*NRVSLIKLSCEDLFIIPHGTVHLFENVGEYHAILI 275
           H HPR   +IFV  G +N  F DT NR+   KL   D+FI P GTVH  +N G+  A  +
Sbjct: 111 HIHPRGSETIFVVRGALNVGFVDTSNRLFSHKLVAGDVFIFPKGTVHYLQNTGKITAFTV 170

Query: 274 VAFNYEN 254
            AFN +N
Sbjct: 171 SAFNSQN 177


>gb|AAC05146.1| germin-like protein [Pinus radiata]
          Length = 228

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = -3

Query: 451 HNHPRKL*SIFVSHGIVNAVF-DT*NRVSLIKLSCEDLFIIPHGTVHLFENVGEYHAILI 275
           H HPR   +IFV  G +N  F DT NR+   KL   D+F+ P G VH  +N+G+  A ++
Sbjct: 119 HIHPRGSETIFVVRGALNVGFVDTSNRLFSHKLVTGDVFVFPKGAVHYLQNIGKITAFIV 178

Query: 274 VAFNYEN 254
            AFN +N
Sbjct: 179 SAFNSQN 185


>gb|AAT09853.1| germin-like protein [Pinus taeda]
          Length = 228

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = -3

Query: 451 HNHPRKL*SIFVSHGIVNAVF-DT*NRVSLIKLSCEDLFIIPHGTVHLFENVGEYHAILI 275
           H HPR   ++FV  G +N  F DT NR+   KL   D+F+ P G VH  +N+G+  A ++
Sbjct: 119 HIHPRGSETVFVVRGALNVGFVDTSNRLFSHKLVTGDVFVFPKGAVHYLQNIGKITAFIV 178

Query: 274 VAFNYEN 254
            AFN +N
Sbjct: 179 SAFNSQN 185


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