BLASTX nr result

ID: Ephedra28_contig00018984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00018984
         (530 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76109.1| unknown [Picea sitchensis]                             158   6e-37
ref|XP_002975219.1| hypothetical protein SELMODRAFT_415324 [Sela...   114   1e-23
ref|XP_001753673.1| predicted protein [Physcomitrella patens] gi...   113   2e-23
ref|XP_001755168.1| predicted protein [Physcomitrella patens] gi...    90   3e-16

>gb|ADE76109.1| unknown [Picea sitchensis]
          Length = 180

 Score =  158 bits (400), Expect = 6e-37
 Identities = 81/175 (46%), Positives = 119/175 (68%), Gaps = 3/175 (1%)
 Frame = -1

Query: 518 EKSKKRNRSRMIRCLETVDDIFNISSIYEVSLKYAFTRFQS---SQLLHSDNLLPALECL 348
           E+ +  N+  +   +E VD + ++S  Y  +L+ AF RFQ+   + +L   +LL AL+ L
Sbjct: 3   EEGRNNNKGEIPSWVERVDKLLDVSPRYVTALRSAFIRFQTPPPNAILPRAHLLLALQFL 62

Query: 347 VKNITDEIDEKAGKLCLRPVSQPDLDALLQSDKSIDISQPIDIAQFDEIAKKMIKRIAVE 168
           V+ ITDE+D K GKLCLRP++Q D+DA+LQSD++I+I +PI+I  FDEIA+K++KR+A+E
Sbjct: 63  VQKITDELDAKVGKLCLRPITQDDIDAVLQSDRTINIERPINIKCFDEIARKVLKRVALE 122

Query: 167 RSIRLGAFVVGGIVAVHIFKGTFRKXXXXXXXXXXXLDFFAPTILLGPAAGVTGA 3
           R  RLG F+VGGI+ VH+ KGT RK           ++ F PT + G AAG+ GA
Sbjct: 123 RGKRLGFFIVGGILVVHLLKGTVRKIPFIGPTVGTVVNMFMPTTVFGAAAGIAGA 177


>ref|XP_002975219.1| hypothetical protein SELMODRAFT_415324 [Selaginella moellendorffii]
           gi|302791721|ref|XP_002977627.1| hypothetical protein
           SELMODRAFT_417514 [Selaginella moellendorffii]
           gi|300154997|gb|EFJ21631.1| hypothetical protein
           SELMODRAFT_417514 [Selaginella moellendorffii]
           gi|300157378|gb|EFJ24004.1| hypothetical protein
           SELMODRAFT_415324 [Selaginella moellendorffii]
          Length = 192

 Score =  114 bits (286), Expect = 1e-23
 Identities = 63/182 (34%), Positives = 108/182 (59%), Gaps = 8/182 (4%)
 Frame = -1

Query: 524 DQEKSKKRNRSRMIR----CLETVDDIFNISSIYEVSLKYAFTRFQS---SQLLHSDNLL 366
           +++ ++K+ R+   +      + VD + + S+ Y  ++  AF RFQ    + ++  + LL
Sbjct: 8   EEDDTEKQERAPFFQGSGSVADAVDRLLDGSTRYLTAVHAAFIRFQEPPPASVIPKECLL 67

Query: 365 PALECLVKNITDEIDEKAGKLCLRPVSQPDLDALLQSDKSIDISQ-PIDIAQFDEIAKKM 189
            AL   ++ + +E+D K GKL  RPV Q DL+A+L+ D S +I   PIDI +F+++A+++
Sbjct: 68  SALRLFLQTLAEELDPKPGKLLFRPVEQEDLEAILEYDTSPEIVDVPIDIDRFEQLARRL 127

Query: 188 IKRIAVERSIRLGAFVVGGIVAVHIFKGTFRKXXXXXXXXXXXLDFFAPTILLGPAAGVT 9
           IKR+A++R  RLG F++GG++ VH+ K   +K           +D   PT  +GPA GV 
Sbjct: 128 IKRVALDRGKRLGLFMLGGVMLVHMAKSVVKKVPFIGGPLGCFVDVLLPTTFIGPAVGVA 187

Query: 8   GA 3
           GA
Sbjct: 188 GA 189


>ref|XP_001753673.1| predicted protein [Physcomitrella patens]
           gi|162695080|gb|EDQ81425.1| predicted protein
           [Physcomitrella patens]
          Length = 212

 Score =  113 bits (283), Expect = 2e-23
 Identities = 59/160 (36%), Positives = 97/160 (60%), Gaps = 3/160 (1%)
 Frame = -1

Query: 473 ETVDDIFNISSIYEVSLKYAFTRFQS---SQLLHSDNLLPALECLVKNITDEIDEKAGKL 303
           E+VD + + S  ++ +++ AF +FQ    ++ L  + LLPAL+  V+ + D++D K GKL
Sbjct: 50  ESVDRLLDESHRFKSAVRAAFEQFQMPRPAKELPVNQLLPALQFFVQRLCDDLDAKCGKL 109

Query: 302 CLRPVSQPDLDALLQSDKSIDISQPIDIAQFDEIAKKMIKRIAVERSIRLGAFVVGGIVA 123
            LRP++Q D+   ++S+ S+ +   +   QF+  A++ +KR+A++R  RLG F++GGI A
Sbjct: 110 VLRPITQEDIQGSMRSNPSLTLQPLLTAQQFESFARETLKRVALDRGKRLGLFMIGGIFA 169

Query: 122 VHIFKGTFRKXXXXXXXXXXXLDFFAPTILLGPAAGVTGA 3
           VH+ KG  +K            +   PT LLGPA GV GA
Sbjct: 170 VHMAKGAVKKIPILGGPLGAFANVLLPTTLLGPAVGVAGA 209


>ref|XP_001755168.1| predicted protein [Physcomitrella patens]
           gi|162693761|gb|EDQ80112.1| predicted protein
           [Physcomitrella patens]
          Length = 338

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 44/116 (37%), Positives = 70/116 (60%)
 Frame = -1

Query: 359 LECLVKNITDEIDEKAGKLCLRPVSQPDLDALLQSDKSIDISQPIDIAQFDEIAKKMIKR 180
           +E  +K+I+D +D KA KL LRP++Q D+   ++ + S+ +   I    F+ IA++++KR
Sbjct: 164 VEKRMKSISDNLDTKAVKLVLRPITQDDIRGAVECNPSLSLDSLITYQYFERIAREVLKR 223

Query: 179 IAVERSIRLGAFVVGGIVAVHIFKGTFRKXXXXXXXXXXXLDFFAPTILLGPAAGV 12
           +A++R  RLG F++GGI AVH+ KG  +K                PT +LGPA GV
Sbjct: 224 VALDRGKRLGLFMIGGIFAVHMTKGAIKKIPILGGPIGAIASVLVPTTVLGPAVGV 279


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