BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00018830
         (1536 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006849319.1| hypothetical protein AMTR_s00164p00020970 [A...   169   4e-39
ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   159   3e-36
emb|CBI28530.3| unnamed protein product [Vitis vinifera]              159   3e-36
gb|ESW27283.1| hypothetical protein PHAVU_003G188300g [Phaseolus...   155   3e-35
ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containi...   153   2e-34
gb|EOY21933.1| Pentatricopeptide repeat superfamily protein [The...   152   5e-34
ref|XP_002514722.1| pentatricopeptide repeat-containing protein,...   151   8e-34
ref|XP_006494986.1| PREDICTED: pentatricopeptide repeat-containi...   149   3e-33
ref|XP_006440653.1| hypothetical protein CICLE_v10023621mg [Citr...   148   7e-33
ref|XP_002318601.2| hypothetical protein POPTR_0012s07030g, part...   141   7e-31
gb|EMT32379.1| Pentatricopeptide repeat-containing protein [Aegi...   141   9e-31
ref|XP_006280363.1| hypothetical protein CARUB_v10026291mg [Caps...   140   2e-30
ref|NP_001159257.1| hypothetical protein [Zea mays] gi|223943049...   140   2e-30
ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago t...   139   2e-30
gb|EXB38552.1| hypothetical protein L484_008580 [Morus notabilis]     138   7e-30
ref|XP_006394515.1| hypothetical protein EUTSA_v10004085mg [Eutr...   137   9e-30
ref|XP_004508741.1| PREDICTED: pentatricopeptide repeat-containi...   137   9e-30
ref|NP_200945.1| pentatricopeptide repeat-containing protein [Ar...   137   2e-29
ref|XP_002866430.1| hypothetical protein ARALYDRAFT_496296 [Arab...   136   2e-29
gb|AAM65325.1| unknown [Arabidopsis thaliana]                         136   2e-29

>ref|XP_006849319.1| hypothetical protein AMTR_s00164p00020970 [Amborella trichopoda]
            gi|548852840|gb|ERN10900.1| hypothetical protein
            AMTR_s00164p00020970 [Amborella trichopoda]
          Length = 459

 Score =  169 bits (427), Expect = 4e-39
 Identities = 124/414 (29%), Positives = 212/414 (51%), Gaps = 9/414 (2%)
 Frame = -2

Query: 1481 SPATILSNVVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAI 1302
            S A  LS ++L  +G+LD +E+ LN + I  +P +VT+V+ +C   A +RRLLRF  W+ 
Sbjct: 23   SDAQKLSKLLL-DIGNLDDIESNLNQSEILISPPLVTQVMESCTHRAQTRRLLRFFTWSA 81

Query: 1301 ALPNCKDDPQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKI 1122
              P CK    LFN A+ +F   +D +AM++++  +K     + + ++AA   T++   K 
Sbjct: 82   KQPTCKLPDTLFNHAIKLFASLKDLRAMELLVTELKRESRGMGIDTWAAIATTMVDHGKE 141

Query: 1121 SQAIGVFRRYNRAR--ESPEVVSIFIVSLCNHGYPDVAEHIL-DPKMFSSYYEYSSTPPA 951
             QAIG+F+   + R     + +++ + +LC  G+   AE ++ + K + S   Y      
Sbjct: 142  DQAIGIFKNIEKYRCPRDEKSLNLLVHALCARGHARKAEGVVWNAKNWVSMDSY------ 195

Query: 950  KEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCKAAN---NPGAM 780
                +  L+ GW IKG  + A++  + ++  G  P+L AY++ + C+C A N   NP A+
Sbjct: 196  ---IFTTLIHGWCIKGEFKDARRVFEEMRSNGFSPNLVAYHSLIRCVC-AKNLRINPSAL 251

Query: 779  FDTGFDIISEMNNVGV-PLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYX 603
                F+++ EM +  V P  IS F  LI++L    R   A  VF  M +  C  DY  Y 
Sbjct: 252  VRDFFELVMEMRSNSVCPTTIS-FNILISYLGRARRVKEADQVFRAMVQEGCDPDYVSYF 310

Query: 602  XXXXXXXXXXKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGN 423
                      +  + G+ +++ + +  ++        L   L  VE+ D A+ +L  +  
Sbjct: 311  LVVRLLYLTGRMGK-GNEMVDEMIQIGLKPKARFYHSLTGVLCGVEKVDHALWLLARMKE 369

Query: 422  D--EKKGLVYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEV 267
            +  E  G  YD +I  L   G+F+  R +W+EA + G  L+   D+LDP+KTEV
Sbjct: 370  NCSEVYGPTYDLLITKLCKGGKFEIGRKLWDEALERGAVLQCSVDLLDPSKTEV 423


>ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At5g61370, mitochondrial-like [Vitis vinifera]
          Length = 505

 Score =  159 bits (402), Expect = 3e-36
 Identities = 113/407 (27%), Positives = 201/407 (49%), Gaps = 7/407 (1%)
 Frame = -2

Query: 1466 LSNVVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAIALPNC 1287
            L NVV  G+G LD +EA+L+  +   T ++++++L  C  EA +RRLLRF  W+    NC
Sbjct: 43   LCNVVSNGVGSLDDLEASLDRLDASFTSSLISQILDTCKNEAPTRRLLRFFLWSSKKFNC 102

Query: 1286 KDDPQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIG 1107
            K +   FN A+ VF  K+D KA+D+++  + +    +   +F    +TL+   +   A+G
Sbjct: 103  KLEDDDFNYAIQVFAEKKDLKAIDILVSDLSNEGREMKAQTFGIVAETLVSLGREDDALG 162

Query: 1106 VFRRYNRARESPEVVSI--FIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEIFYN 933
            +F+  ++ + S + V++   + +LC+ G+   AE ++        +        K   Y 
Sbjct: 163  LFKNLDKFKCSYDSVTVTAIVNALCSKGHARRAEGVV-------RHHKDKILGVKPCIYR 215

Query: 932  HLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCK--AANNPGAMFDTGFDI 759
             L  GWS +   + A++ L+ +K  G  P L  YN +L CLC+    +NP  +     ++
Sbjct: 216  SLFYGWSEQKNVKEARRILKEMKSVGIMPDLFCYNTFLRCLCERNLKSNPSGLVPEALNV 275

Query: 758  ISEM-NNVGVPLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXXX 582
            + EM +N   P  IS +  L++ L    R   +  + D M +  C  D+  Y        
Sbjct: 276  MMEMRSNRITPTSIS-YNILLSCLGRTRRVKESCRILDLMKRLGCSPDWVSYYLVARVLY 334

Query: 581  XXXKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL- 405
               ++ + G+ +++ + +  +  D +    L+  L  VER + A+ M   +      G  
Sbjct: 335  LTGRFGK-GNQIVDEMIEEGLVPDRKFYYDLIGVLCGVERVNYALEMFERMKRSSLGGYG 393

Query: 404  -VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEV 267
             VYD +I  L   G F + R +W+EA + GV L   S++LDP+ T+V
Sbjct: 394  PVYDVLIPKLCRSGDFGKGRELWDEATRVGVLLHCSSEVLDPSITKV 440


>emb|CBI28530.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  159 bits (402), Expect = 3e-36
 Identities = 113/407 (27%), Positives = 201/407 (49%), Gaps = 7/407 (1%)
 Frame = -2

Query: 1466 LSNVVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAIALPNC 1287
            L NVV  G+G LD +EA+L+  +   T ++++++L  C  EA +RRLLRF  W+    NC
Sbjct: 12   LCNVVSNGVGSLDDLEASLDRLDASFTSSLISQILDTCKNEAPTRRLLRFFLWSSKKFNC 71

Query: 1286 KDDPQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIG 1107
            K +   FN A+ VF  K+D KA+D+++  + +    +   +F    +TL+   +   A+G
Sbjct: 72   KLEDDDFNYAIQVFAEKKDLKAIDILVSDLSNEGREMKAQTFGIVAETLVSLGREDDALG 131

Query: 1106 VFRRYNRARESPEVVSI--FIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEIFYN 933
            +F+  ++ + S + V++   + +LC+ G+   AE ++        +        K   Y 
Sbjct: 132  LFKNLDKFKCSYDSVTVTAIVNALCSKGHARRAEGVV-------RHHKDKILGVKPCIYR 184

Query: 932  HLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCK--AANNPGAMFDTGFDI 759
             L  GWS +   + A++ L+ +K  G  P L  YN +L CLC+    +NP  +     ++
Sbjct: 185  SLFYGWSEQKNVKEARRILKEMKSVGIMPDLFCYNTFLRCLCERNLKSNPSGLVPEALNV 244

Query: 758  ISEM-NNVGVPLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXXX 582
            + EM +N   P  IS +  L++ L    R   +  + D M +  C  D+  Y        
Sbjct: 245  MMEMRSNRITPTSIS-YNILLSCLGRTRRVKESCRILDLMKRLGCSPDWVSYYLVARVLY 303

Query: 581  XXXKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL- 405
               ++ + G+ +++ + +  +  D +    L+  L  VER + A+ M   +      G  
Sbjct: 304  LTGRFGK-GNQIVDEMIEEGLVPDRKFYYDLIGVLCGVERVNYALEMFERMKRSSLGGYG 362

Query: 404  -VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEV 267
             VYD +I  L   G F + R +W+EA + GV L   S++LDP+ T+V
Sbjct: 363  PVYDVLIPKLCRSGDFGKGRELWDEATRVGVLLHCSSEVLDPSITKV 409


>gb|ESW27283.1| hypothetical protein PHAVU_003G188300g [Phaseolus vulgaris]
          Length = 494

 Score =  155 bits (393), Expect = 3e-35
 Identities = 118/431 (27%), Positives = 208/431 (48%), Gaps = 9/431 (2%)
 Frame = -2

Query: 1466 LSNVVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAIALPNC 1287
            L +VV+  +G LD +E +LN      T ++V + + +   EA +RRLLRF  W+    + 
Sbjct: 49   LCSVVVSTVGGLDDLEFSLNKFKDSLTSSLVAQAIDSSKHEAHTRRLLRFFLWSSKNLSH 108

Query: 1286 KDDPQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIG 1107
              + + +N AL VF  K D  AMD+++  +K    ++   +F    DTL+K  K  QA+G
Sbjct: 109  SLENKDYNHALRVFAEKNDYTAMDILMEDLKKEGRVMDAETFGLVADTLVKLGKEDQALG 168

Query: 1106 VFRRYNRARESPE--VVSIFIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEIFYN 933
            VF+  ++ + S +   V+  I +LC+ G+   AE ++       ++       AK   Y 
Sbjct: 169  VFKNLDKYKCSIDEFTVTAIINALCSKGHAKRAEGVV-------WHHRDKITGAKPCIYR 221

Query: 932  HLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCKA--ANNPGAMFDTGFDI 759
             L+ GWS++   + A++ ++ +K  G  P L  YN +L CLC+    +NP  +     ++
Sbjct: 222  SLLYGWSVQRNVKEARRIIKEMKANGVTPDLLCYNTFLRCLCERNLRHNPSGLVPEALNV 281

Query: 758  ISEMNNVGV-PLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXXX 582
            + EM +  V P  IS +  L++ L    R   +  + + M    C  D+  Y        
Sbjct: 282  MMEMRSCRVFPTPIS-YNILLSCLGKTRRVKESCQILETMTNGGCDPDWVSYYLVAKVLF 340

Query: 581  XXXKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL- 405
               ++ +  D + + + K  +  + +    L+  L  VER + A+ +   +  +   G  
Sbjct: 341  LSGRFGKGKDIVDQMIGKGLMP-NHKFYYSLIGILCGVERVNHALELFEKMKKNSMGGYG 399

Query: 404  -VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEVRDREHPWFPCL-- 234
             VYD +I  L T G F++ R +W+EA   G+ L+   D+LDP+ T+V     P    L  
Sbjct: 400  PVYDVLIPKLCTGGNFEKGRELWDEATSMGIILQCSEDVLDPSITQVYKPTKPEKISLVD 459

Query: 233  TLVASKPRRIK 201
            + VA  P ++K
Sbjct: 460  SSVAKSPHKVK 470


>ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
            mitochondrial-like [Cucumis sativus]
            gi|449477571|ref|XP_004155060.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g61370,
            mitochondrial-like [Cucumis sativus]
          Length = 487

 Score =  153 bits (387), Expect = 2e-34
 Identities = 108/407 (26%), Positives = 193/407 (47%), Gaps = 7/407 (1%)
 Frame = -2

Query: 1466 LSNVVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAIALPNC 1287
            L  V+   +G LD +E++LN   I  T ++VT+V+ +   EA +RRLLRF  W++   N 
Sbjct: 53   LCEVISCTIGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNH 112

Query: 1286 KDDPQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIG 1107
              + + FN A+  F +K+D  A++++L  +K     +   +F    +  +K ++  +A+G
Sbjct: 113  TLEDEDFNNAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALG 172

Query: 1106 VFR---RYNRARESPEVVSIFIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEIFY 936
            +F+   +Y    +   VV+I I +LC+ G+   AE ++        +            Y
Sbjct: 173  LFKNLEKYKCPHDQFTVVAI-ITALCSKGHAKRAEGVV-------LHHKDKISSTMSCIY 224

Query: 935  NHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCK--AANNPGAMFDTGFD 762
              L+ GWSIK   + A++ L+ +K  G  P L  YN +L CLC+     NP  +     +
Sbjct: 225  RSLLYGWSIKKNTKEARRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLN 284

Query: 761  IISEMNNVGVPLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXXX 582
            ++ EM +  +  +   +  L++ LC   R   +  + + M +  C  D   Y        
Sbjct: 285  VMMEMRSYKISPNSISYNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLF 344

Query: 581  XXXKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL- 405
               ++ + G  +++ + +  +  D +    L+  L  VER + A+ +   +      G  
Sbjct: 345  LTGRFGK-GREIVDEMIEEGLTPDRKFYYDLIGILCGVERTNYALELFEKMKRSSLGGYG 403

Query: 404  -VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEV 267
             VYD +I  L   G F+  R +W EA   GV L   S+ILDP+ T+V
Sbjct: 404  PVYDVLIPKLCRGGEFEMGRQLWEEAMAMGVSLNCSSEILDPSITKV 450


>gb|EOY21933.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
          Length = 487

 Score =  152 bits (383), Expect = 5e-34
 Identities = 105/407 (25%), Positives = 199/407 (48%), Gaps = 7/407 (1%)
 Frame = -2

Query: 1466 LSNVVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAIALPNC 1287
            L  VV   +G LD +E++LN   +  +P +VT+V+ +C  EA +RRLLRF  W++   + 
Sbjct: 43   LCKVVSSSMGGLDDLESSLNRFKLSLSPLLVTQVINSCENEAPTRRLLRFFLWSVKNLSS 102

Query: 1286 KDDPQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIG 1107
              + +  N  + VF +K+D  AM +++  I++    +   +F+   + L+K  +  +A+G
Sbjct: 103  SLEDKDLNNVVRVFAKKKDHTAMGILVSDIRNRGRTMESQTFSVVAEMLVKLGREDEALG 162

Query: 1106 VFR---RYNRARESPEVVSIFIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEIFY 936
            +F+   ++   R+S  + +I + +LC  G+   AE ++       Y+   +    +   Y
Sbjct: 163  IFKNLEKFKCPRDSFSLTAI-VNALCAKGHARKAEGVV-------YHHKDTIAGVEPCIY 214

Query: 935  NHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLC--KAANNPGAMFDTGFD 762
              L+ GWS++   + A++ ++ +K  G +  L  YN +L CLC   A  NP  +     +
Sbjct: 215  RCLLYGWSVQENVKEARRVIKEMKSAGFELDLYCYNTFLRCLCGKNAKRNPSGLVPEALN 274

Query: 761  IISEMNNVGVPLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXXX 582
            ++ EM +  +      +  L++ L    R   +  + + M K  C  D+  Y        
Sbjct: 275  VMMEMRSQRIAPTSVSYNILLSCLGRTRRVKESCQILELMKKAGCAPDWISYYLVARVLY 334

Query: 581  XXXKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL- 405
               ++ + G+ +++ + +  +  D +    L+  L  VER + A+ +   +      G  
Sbjct: 335  LTGRFGK-GNKIVDEMIEQGLTPDRKFYYDLIGVLCGVERVNFALELFERMKRSSLGGYG 393

Query: 404  -VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEV 267
             VYD +I  L   G F++ R +W+EA   GV L   SD+LDP+ TEV
Sbjct: 394  PVYDVLIPKLCRGGDFEKGRELWDEAVATGVSLSCSSDVLDPSITEV 440


>ref|XP_002514722.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223546326|gb|EEF47828.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 479

 Score =  151 bits (381), Expect = 8e-34
 Identities = 100/406 (24%), Positives = 195/406 (48%), Gaps = 6/406 (1%)
 Frame = -2

Query: 1466 LSNVVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAIALPNC 1287
            +   V   +G LD +E++LN      T  +VT+V+  C  EA +RRLLRF  W+    + 
Sbjct: 28   ICKAVSSSIGGLDDLESSLNGFRGNLTSQIVTQVIDCCKHEAPTRRLLRFFLWSYKRLDF 87

Query: 1286 KDDPQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIG 1107
                + FN A+ V   K+D  AM +++  ++    ++   +F    + L+K  +  +A+G
Sbjct: 88   SMKDEDFNHAIRVLAEKKDHTAMQILISDLRKEGRVMEPQTFGLVAEALVKLGREDEALG 147

Query: 1106 VFRRYNRAR--ESPEVVSIFIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEIFYN 933
            +F+  ++ +  +  E V+  I +LC  G+   A  ++       +++   +   +   Y 
Sbjct: 148  IFKNLDKFKCPQDCETVTAIITALCAEGHAKKAYGVV------LHHKDKLSEVIRPCIYR 201

Query: 932  HLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCK--AANNPGAMFDTGFDI 759
             L+ GWS++   + A++ +Q +K  G KP L  YN +L CLC+     NP  +     ++
Sbjct: 202  SLIYGWSMQKNVKRAREVIQEMKRNGIKPDLFCYNTFLRCLCERNVERNPSGLVPESLNV 261

Query: 758  ISEMNNVGVPLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXXXX 579
            + EM +  +  +   +  L++ L    R   +  + + M K  C  D+  Y         
Sbjct: 262  MMEMRSYRIEPNSISYNILLSCLGRVRRVQESCKILELMKKSSCAPDWVSYYLVAKVLYL 321

Query: 578  XXKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL-- 405
              ++ + G+ +++ + + R+  D +    L+  L  VER + A+ + + +      G   
Sbjct: 322  TGRFGK-GNKIVDEMIERRLVPDRKFYYDLIGILCGVERVNFALKLFDQMKRSSSGGYGP 380

Query: 404  VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEV 267
            VYD +I  L   G F++ + +W+EA   GV +   S++LDP+ T+V
Sbjct: 381  VYDLLIPKLCIGGNFEKGKELWDEAMAMGVTVHCSSEVLDPSITKV 426


>ref|XP_006494986.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
            mitochondrial-like [Citrus sinensis]
          Length = 495

 Score =  149 bits (376), Expect = 3e-33
 Identities = 110/419 (26%), Positives = 202/419 (48%), Gaps = 8/419 (1%)
 Frame = -2

Query: 1466 LSNVVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAIALPNC 1287
            L  VV   +G LD +E +LN      T ++VT+V+ +C +EA +RRLLRF  W+    + 
Sbjct: 50   LCKVVSSTIGGLDDLELSLNQFTGSLTSSLVTQVIDSCKQEAPTRRLLRFFLWSCKNMSA 109

Query: 1286 KDDPQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIG 1107
              + + +N A+ VF  K+D  AM++++  ++    ++   SF   ++TL+K  +  +A+G
Sbjct: 110  SLEDKDYNHAIRVFAEKRDHTAMNILVSDLRKEGRVMESQSFGVLVETLVKLGREDEALG 169

Query: 1106 VFRRYNRAR--ESPEVVSIFIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEIFYN 933
            +F+   + +  +    VS  + +LC  G+   AE ++       Y+        +   Y 
Sbjct: 170  IFKNLEKFKCVQDSVTVSAIVSALCAKGHARRAEGVV-------YHHKDKISGVELCIYR 222

Query: 932  HLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCK--AANNPGAMFDTGFDI 759
             L+ GWS++   + A+K ++ +K  G  P L  YN +L  LC+     NP  +     ++
Sbjct: 223  SLIYGWSMQENVKAARKIIKEMKSAGIMPDLFCYNTFLRGLCERNLKRNPSGLVPEALNV 282

Query: 758  ISEMNNVGV-PLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXXX 582
            + EM +  + P  IS +  L++ L    R   +  V ++M K  C  D+  Y        
Sbjct: 283  MMEMRSYRIAPTSIS-YNILLSCLGRTRRVKESCQVLEQMKKSGCAPDWVSYYLVARVLY 341

Query: 581  XXXKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL- 405
               ++ + G+ +++ + +  +  D +    L+  L  VER + A+ +   +      G  
Sbjct: 342  LSGRFGK-GNKIVDEMIEEGLIPDRKFYYDLIGILCGVERVNFALELFERMKRSSLGGYG 400

Query: 404  -VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEV-RDREHPWFPCL 234
             VYD +I  +   G F + R +W+EA   G+ L   S++LDP+  EV + R  P   CL
Sbjct: 401  PVYDVLIPKVCRGGDFVKGRELWDEAMVMGLTLSCSSNVLDPSIIEVFQPRRKPTESCL 459


>ref|XP_006440653.1| hypothetical protein CICLE_v10023621mg [Citrus clementina]
            gi|557542915|gb|ESR53893.1| hypothetical protein
            CICLE_v10023621mg [Citrus clementina]
          Length = 488

 Score =  148 bits (373), Expect = 7e-33
 Identities = 110/419 (26%), Positives = 201/419 (47%), Gaps = 8/419 (1%)
 Frame = -2

Query: 1466 LSNVVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAIALPNC 1287
            L  VV   +G LD +E +LN      + ++VT+V+ +C  EA +RRLLRF  W+    + 
Sbjct: 45   LCKVVSSTIGGLDDLELSLNQFTGSLSSSLVTQVIDSCKHEAPTRRLLRFFLWSCKNLSA 104

Query: 1286 KDDPQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIG 1107
              + + +N A+ VF  K+D  AM++++  ++    ++   SF   ++TL+K  +  +A+G
Sbjct: 105  SLEDKDYNHAIRVFAEKKDHMAMNILVSDLRKEGRVMETQSFGVLVETLVKLGREDEALG 164

Query: 1106 VFRRYNRAR--ESPEVVSIFIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEIFYN 933
            +F+   + +  +    VS  + +LC  G+   AE ++       Y+        +   Y 
Sbjct: 165  IFKNLEKFKCVQDSVTVSAIVSALCAKGHARRAEGVV-------YHHKDKISGVELCIYR 217

Query: 932  HLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCK--AANNPGAMFDTGFDI 759
             L+ GWS++   + A+K ++ +K  G  P L  YN +L  LC+     NP  +     ++
Sbjct: 218  SLIYGWSMQENVKAARKIIKEMKSAGFMPDLFCYNTFLRGLCERNLKRNPSGLVPEALNV 277

Query: 758  ISEMNNVGV-PLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXXX 582
            + EM +  + P  IS +  L++ L    R   +  V ++M K  C  D+  Y        
Sbjct: 278  MMEMRSYRIAPTSIS-YNILLSCLGRTRRVKESCRVLEQMKKSGCAPDWVSYYLVARVLY 336

Query: 581  XXXKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL- 405
               ++ + G+ +++ + +  +  D +    L+  L  VER + A+ +   +      G  
Sbjct: 337  LSGRFGK-GNKIVDEMIEEGLIPDRKFYYDLIGILCGVERVNFALELFERMKRSSLGGYG 395

Query: 404  -VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEV-RDREHPWFPCL 234
             VYD +I  +   G F + R +W+EA   G+ L   S++LDP+ TEV   R  P   CL
Sbjct: 396  PVYDVLIPKVCQGGDFVKGRELWDEAMVMGLTLSCSSNVLDPSITEVFHPRRKPTEGCL 454


>ref|XP_002318601.2| hypothetical protein POPTR_0012s07030g, partial [Populus trichocarpa]
            gi|550326549|gb|EEE96821.2| hypothetical protein
            POPTR_0012s07030g, partial [Populus trichocarpa]
          Length = 410

 Score =  141 bits (356), Expect = 7e-31
 Identities = 104/407 (25%), Positives = 189/407 (46%), Gaps = 9/407 (2%)
 Frame = -2

Query: 1457 VVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWA---IALPNC 1287
            V+   +G LD +E +LN    + T  +VT+++ +C  EA SRR+LRF  W+   +     
Sbjct: 4    VISSWIGGLDDLELSLNQFKGQLTYPLVTQIINSCKHEAPSRRILRFFLWSNKVLDSEKL 63

Query: 1286 KDDPQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIG 1107
            KDD   FN  + V   K+D   M +++  ++    ++   +FA   +TL+K  +  +A+G
Sbjct: 64   KDDD--FNHVIRVLAEKKDHTGMRILISDLRKEGRVMDPQTFALVAETLVKLGREDEALG 121

Query: 1106 VFRRYNRAR--ESPEVVSIFIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEIFYN 933
            +F+   + +  +    V+  I +LC  G+   A+ +     FS +     +     + Y 
Sbjct: 122  IFKNLEKFKCPQDGFAVTAIISALCAKGHAKKAQGV-----FSHHKNNKISGLEPCVVYR 176

Query: 932  HLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCKA--ANNPGAMFDTGFDI 759
             L+ GWS++   + A+K +Q +K  G  P L  YN +L CLC+     NP  +     ++
Sbjct: 177  CLLYGWSVQENVKEARKIIQEMKGDGLIPDLFCYNTFLKCLCERNLKRNPSGLVPEALNV 236

Query: 758  ISEMNNVGVPLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXXXX 579
            + EM +  +  +   + TL++ L    R   +  + + M    C  D+  Y         
Sbjct: 237  MMEMRSYRIEPNSISYNTLLSSLGRARRVKESYRMLETMKTTGCAPDWVSYFLVAKVMYL 296

Query: 578  XXKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL-- 405
              ++ + G+ +++ +    +  D +    L+  L  VER   A+ +   +      G   
Sbjct: 297  TGRFGK-GNEIVDEMIGQGLLPDRKFYYNLIGVLCGVERVSYALELFERMKTSSLGGYGP 355

Query: 404  VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEVR 264
            VYD +I  L   G F++ R +W EA   GV     SD+LDP+ TE +
Sbjct: 356  VYDILIPKLCKGGDFERGRELWEEATAMGVSFSCSSDVLDPSITEYK 402


>gb|EMT32379.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
          Length = 706

 Score =  141 bits (355), Expect = 9e-31
 Identities = 118/419 (28%), Positives = 200/419 (47%), Gaps = 21/419 (5%)
 Frame = -2

Query: 1460 NVVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVS-RRLLRFTNWAIALPNCK 1284
            +VV +G G LD + + L+  N   +PA+V  V+ +C+E + S RRLLRF +W  +     
Sbjct: 50   DVVCFGSGSLDEVGSRLDRLNFAISPALVRRVIDSCSERSDSGRRLLRFLSWCRSKDPAG 109

Query: 1283 DDPQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIGV 1104
               +  + A++V  R  D  A+ + +   + +   ++  +F A ++ L+KA K   A+ +
Sbjct: 110  LGDEEHDRAIAVLARMGDLTAIKIAVGDGEKDGRRMAPETFTAVVEALVKAGKEDDAVRL 169

Query: 1103 FRRYNRARESPE-----------VVSIFIV-SLCNHGYPDVAEHILDPKMFSSYYEYSST 960
            FR   R +  P+             S+ +V +LC  GY   A+ ++       +    S 
Sbjct: 170  FRGLERQKLLPQQGPGAGGEGIWCSSLAMVQTLCMKGYAREAQGVV-----WHHKSELSA 224

Query: 959  PPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLC--KAANNPG 786
             P   I    L+ GW + G  + A++ L  IK +G    L ++N +L+C+C      NP 
Sbjct: 225  EPMVSIVQRSLLHGWCVHGNAKEARRVLDDIKSSGCPLGLPSFNDFLNCVCHRNLKFNPS 284

Query: 785  AMFDTGFDIISEMNNVGVPLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYK--CHADYD 612
            A+     DI++EM + GV    S F  L++ L    R   A  +   M + +  C  D+ 
Sbjct: 285  ALVSEAMDILTEMRSYGVTPDSSSFNILLSCLGRARRVKEAYKILYLMREGEEGCSPDWV 344

Query: 611  VYXXXXXXXXXXXKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNM 432
             Y           +    G  L+E + ++ V    +   GL+  L   E+ D A+ M  +
Sbjct: 345  SYYLVVKVLYLTDRIIR-GKRLVEDMLESGVLPTAKFFHGLIGILCGTEKVDHALDMFKI 403

Query: 431  IGNDEKKGLV----YDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEV 267
            +   +  GLV    YD +IE L+  GRF+ A+ +W++A +NG+ L   SD+LDP KTEV
Sbjct: 404  M---KSCGLVDTHTYDLLIEKLSRSGRFEVAKELWDDATKNGIVLGCSSDLLDPLKTEV 459


>ref|XP_006280363.1| hypothetical protein CARUB_v10026291mg [Capsella rubella]
            gi|482549067|gb|EOA13261.1| hypothetical protein
            CARUB_v10026291mg [Capsella rubella]
          Length = 490

 Score =  140 bits (352), Expect = 2e-30
 Identities = 104/401 (25%), Positives = 192/401 (47%), Gaps = 9/401 (2%)
 Frame = -2

Query: 1442 LGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAIALPNCKDDPQLFN 1263
            +G LD +E  LN  ++ P+  +VT+V+ +C  E   RRLLRF +W+          + FN
Sbjct: 51   IGGLDDLEENLNRVSVSPSSKLVTQVIESCKNETSPRRLLRFFSWSCKNLGSSLHDKEFN 110

Query: 1262 TALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIGVFR---RY 1092
              L V   K+D+ A+ ++L  ++     +   +F+   +TL+K  K   AIG+F+   ++
Sbjct: 111  HVLRVLAEKKDNTAIQILLSDLRKENRAMDKQTFSIVAETLVKIGKEDDAIGIFKILDKF 170

Query: 1091 NRARESPEVVSIFIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEI-FYNHLVCGW 915
            +  ++S  V +I I +LC+ G+   A  ++        + +       E+  Y  L+ GW
Sbjct: 171  SCPQDSFTVTAI-ISALCSRGHVKRALGVM--------HHHKDAISGNELSVYRSLLFGW 221

Query: 914  SIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCK--AANNPGAMFDTGFDIISEMNN 741
            S++   + A++ +Q +K  G  P L  +N+ L CLC+     NP  +     +I+ EM +
Sbjct: 222  SVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMKS 281

Query: 740  VGV-PLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXXXXXXKWR 564
              + P  IS + TL++ L    R   +  + ++M +  C  D   Y           ++ 
Sbjct: 282  YKIQPTSIS-YNTLLSCLGRTRRVKESCQILEQMKRSGCDPDTASYYFVVRVLYLTGRFG 340

Query: 563  EDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL--VYDAI 390
            + G+ +++ + +  +  + +    L+  L  VER + A+ +   +      G   VYD +
Sbjct: 341  K-GNQIVDEMIERELRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGPVYDLL 399

Query: 389  IEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEV 267
            I  L   G F++ + +W EA    V L    D+LDP+ TEV
Sbjct: 400  IPKLCKGGNFEKGKELWEEAMSLDVTLCSSIDLLDPSVTEV 440


>ref|NP_001159257.1| hypothetical protein [Zea mays] gi|223943049|gb|ACN25608.1| unknown
            [Zea mays] gi|223944973|gb|ACN26570.1| unknown [Zea mays]
            gi|414871380|tpg|DAA49937.1| TPA: hypothetical protein
            ZEAMMB73_156182 [Zea mays] gi|414871381|tpg|DAA49938.1|
            TPA: hypothetical protein ZEAMMB73_156182 [Zea mays]
          Length = 499

 Score =  140 bits (352), Expect = 2e-30
 Identities = 113/416 (27%), Positives = 185/416 (44%), Gaps = 19/416 (4%)
 Frame = -2

Query: 1457 VVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEA--VSRRLLRFTNWAIALPNCK 1284
            VV +G G LD + + L+   +  +P ++  V+ +C E      RRLLRF  W  +  +  
Sbjct: 46   VVCFGSGSLDEVGSRLDRLGVAVSPHLIGRVIDSCGETGGGSGRRLLRFLAWCRSKHSGV 105

Query: 1283 DDPQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIGV 1104
               +  + A+ V  R  D  AM + +   + +   ++  +F+  ID L+KA +  +A+ +
Sbjct: 106  LGEEALDRAIGVLARAGDLTAMRIAIADAEKDGRRMAPETFSTVIDALVKAGREDEAVRL 165

Query: 1103 FRRYNRARESPEVVS------------IFIVSLCNHGYPDVAEHILDPKMFSSYYEYSST 960
            FR   R R  PE  S              + +LC  G+   A+ ++       +    S 
Sbjct: 166  FRGLERQRLLPECGSRVGGHGVWSSSLAMVHALCKRGHAREAQGVV-----WHHKSELSA 220

Query: 959  PPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLC--KAANNPG 786
             P   I    L+ GW + G  + A+K L  +K +G    L ++N +L C+C      NP 
Sbjct: 221  EPMVSIVERSLLHGWCVHGNAKEARKVLNEMKSSGVPLGLPSFNEFLHCVCHRNLNFNPS 280

Query: 785  AMFDTGFDIISEMNNVGVPLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYK--CHADYD 612
            A+     DI++EM   GVP   S F  L++ L    R   A  +   M + K  C  D+ 
Sbjct: 281  ALVPEAMDILTEMRTCGVPPAASSFNILLSCLGRARRVKEAYRILYLMREGKAGCSPDWV 340

Query: 611  VYXXXXXXXXXXXKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNM 432
             Y           +    G  L++ + ++ V    +   GL+  L   E  D A+ M  +
Sbjct: 341  SYYLVVRVLYLTRRILR-GKRLVDAMLESGVLPTAKFFHGLIGILCGTEEVDHALDMFKL 399

Query: 431  IGNDEK-KGLVYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEV 267
            +   E     +YD +IE L   GRF+  R +W+EA  +G+ L    D+LDP KTEV
Sbjct: 400  MKRCELVDARIYDLLIEKLCRIGRFEIGRELWDEATNSGLVLGCSQDLLDPLKTEV 455


>ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago truncatula]
            gi|355497182|gb|AES78385.1| Pentatricopeptide repeat
            protein [Medicago truncatula]
          Length = 563

 Score =  139 bits (351), Expect = 2e-30
 Identities = 111/414 (26%), Positives = 197/414 (47%), Gaps = 8/414 (1%)
 Frame = -2

Query: 1466 LSNVVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAIA-LPN 1290
            L ++V   +G LD +E+ LN      T  +V +V+ +   EA +RRLLRF  W+   L N
Sbjct: 117  LCDIVTSTVGGLDDLESCLNKFKGSLTSPLVAQVIDSVKHEAHTRRLLRFFLWSNKNLSN 176

Query: 1289 CKDDPQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAI 1110
              +D   +N AL VFI K+D  AMD++L   K    ++   +F    +T +K  K  +A+
Sbjct: 177  DLEDKD-YNYALRVFIEKKDYTAMDILLGDFKKQGRVMEAQTFGVVAETYVKLGKEDEAL 235

Query: 1109 GVFRRYNRARESPE--VVSIFIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEIFY 936
            G+F+  ++ +   +   V+  I +LC+ G+   AE +       +++       A    Y
Sbjct: 236  GIFKNLDKYKCLIDEFTVTAIINALCSKGHAKRAEGV-------AWHHKDKIKGALPCVY 288

Query: 935  NHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCKA--ANNPGAMFDTGFD 762
              L+ GWS++   + +++ +Q +K  G  P L  YN +L CLC+    NNP  +     +
Sbjct: 289  RSLLYGWSLERNVKESRRIIQEMKTNGVTPDLVCYNTFLRCLCERNLRNNPSGLVLEALN 348

Query: 761  IISEMNNVGV-PLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXX 585
            ++ EM +  V P  IS +  L++ L    R   +  + + M K     D+  Y       
Sbjct: 349  VMMEMRSYKVFPTSIS-YNILLSCLGKTRRVKESCQILEAMNKSGVAPDWVSYYLVSRVL 407

Query: 584  XXXXKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL 405
                ++ + G  +++ + +  +  + +    L+  L  VER + A+ +   +      G 
Sbjct: 408  FLSGRFGK-GKEIVDQMIEKGLVPNHKFYYSLIGILCGVERVNHALDLFEKMKGSSVGGY 466

Query: 404  --VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEVRDREHP 249
              VYD +I  L   G F++ R +W+E    G+ L+   D+LDP+ TEV   + P
Sbjct: 467  GPVYDVLIPKLCRGGDFEKGRELWDEGTYMGITLQCSKDVLDPSITEVYIPKRP 520


>gb|EXB38552.1| hypothetical protein L484_008580 [Morus notabilis]
          Length = 518

 Score =  138 bits (347), Expect = 7e-30
 Identities = 102/409 (24%), Positives = 195/409 (47%), Gaps = 9/409 (2%)
 Frame = -2

Query: 1466 LSNVVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAIALPNC 1287
            L  +V   +G LD +E++L+      T ++VT+V+ +C  EA +RRLLRF  W+     C
Sbjct: 42   LCTIVSRTIGGLDDLESSLSDFRGSLTSSLVTQVIDSCKTEAPTRRLLRFFLWSHKNLKC 101

Query: 1286 KDDPQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIG 1107
              + + +N A+ VF  K+D  A+++++  +K     L   ++A   +TL+K  +  +A+G
Sbjct: 102  DLEDKDYNHAIRVFAGKKDHTALEILVSDLKKGGRALESQTYAIVAETLVKLGREDEALG 161

Query: 1106 VFRRYNRAR--ESPEVVSIFIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEIFYN 933
            +F+  ++ +  ++   V+  + +LC  G+   AE ++        +        +   Y 
Sbjct: 162  IFKNSDKYKCPQNSFTVTAVVNALCAQGHAKRAEGVVG-------HHKDRISGMERCIYR 214

Query: 932  HLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCK--AANNPGAMFDTGFDI 759
             L+ GWS +   + A++ ++ +K  G  P L  YN +L CLC+     NP  +     ++
Sbjct: 215  SLLYGWSEQENVKEARRIIKEMKSAGINPDLFCYNTFLRCLCERNLKRNPSGLVPEALNV 274

Query: 758  ISEMNNVGVPLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXXXX 579
            + EM +  +  +   +  L++ L    R   A  + + M +  C  D+  Y         
Sbjct: 275  MMEMRSYMITPNSISYNILLSCLGRARRVKEACQILERMKQAGCSPDWMSYYLVIRVLYL 334

Query: 578  XXKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL-- 405
              ++ + G+ L++ +    +  + +    L+  L  VER     + L +  + +K+ L  
Sbjct: 335  TMRFGK-GNKLVDEMIGEGLVPNCKFYYDLIGVLCGVER---PYYALELFEHMKKRSLGG 390

Query: 404  ---VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEV 267
               VYD +I  L   G F++ R +W EA   GV     SD+LDP+ T+V
Sbjct: 391  YGPVYDVLIPKLCRGGDFEKGRELWIEAMNMGVDFCCSSDVLDPSITKV 439


>ref|XP_006394515.1| hypothetical protein EUTSA_v10004085mg [Eutrema salsugineum]
            gi|557091154|gb|ESQ31801.1| hypothetical protein
            EUTSA_v10004085mg [Eutrema salsugineum]
          Length = 489

 Score =  137 bits (346), Expect = 9e-30
 Identities = 101/405 (24%), Positives = 190/405 (46%), Gaps = 8/405 (1%)
 Frame = -2

Query: 1457 VVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAIA-LPNCKD 1281
            +V   +G LD +E +LN  ++ P+  +V +V+ +C +E   RRLLRF +W+   L +C +
Sbjct: 45   IVSSPIGGLDDLEESLNQVSVSPSSKLVHKVIDSCKDETSPRRLLRFFSWSCKNLGSCLE 104

Query: 1280 DPQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIGVF 1101
            D + FN  L V   K+D  A+ ++L  ++     +   +F+   +TL+K  +   AIG+F
Sbjct: 105  D-KTFNHVLRVLAEKKDHTAIQILLSDLRKQNRAMDKQTFSLVAETLVKIGREEDAIGIF 163

Query: 1100 RRYNR--ARESPEVVSIFIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEI-FYNH 930
            +  ++   ++    V+  I +LC+ G+   A  ++        + + +     E+  Y  
Sbjct: 164  KILDKFSCQQDSFTVTAIISALCSRGHVKRALGVM--------HHHKALISGNELSVYRS 215

Query: 929  LVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCK--AANNPGAMFDTGFDII 756
            L+ GWS++   + A++ +Q +K +   P L  YN  L CLC+     NP  +     +I+
Sbjct: 216  LLFGWSVQRNVKEARRVIQDMKSSRITPDLFCYNTMLTCLCERNVNRNPSGLVPEALNIM 275

Query: 755  SEMNNVGVPLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXXXXX 576
             EM +  +      +  L++ L    R   +  + ++M K  C  D   Y          
Sbjct: 276  LEMRSYKIQPTCISYNILLSCLARTRRVKESCQILEQMKKSGCDPDTASYYFVVRVLYLT 335

Query: 575  XKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL--V 402
             ++ + G+  ++ + +  +  +      L+  L  V+R + A+ +   +      G   V
Sbjct: 336  GRFGK-GNQTVDEMIERGLRPERRFYYDLIGVLCGVKRVNFALQLFAKMKRSSVGGYGPV 394

Query: 401  YDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEV 267
            YD +I  L   G F++ R +W EA    V L    D+LDP+ TEV
Sbjct: 395  YDLLIPKLCKGGDFEKGRELWEEAMSLDVTLSCSVDLLDPSLTEV 439


>ref|XP_004508741.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690-like
            [Cicer arietinum]
          Length = 1253

 Score =  137 bits (346), Expect = 9e-30
 Identities = 106/413 (25%), Positives = 194/413 (46%), Gaps = 7/413 (1%)
 Frame = -2

Query: 1466 LSNVVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAIALPNC 1287
            L N+V   +G LD +E +LN        ++V + + +   EA +RRLLRF  W+    + 
Sbjct: 806  LCNIVTSTVGGLDDLELSLNKFKGSINSSLVAQAIDSIKHEAHTRRLLRFFLWSNKHLSR 865

Query: 1286 KDDPQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIG 1107
              +   +N AL VF  K+D  AMD++L  +K    ++   +F    +T +K  K  +A+G
Sbjct: 866  DLEDNDYNYALRVFAEKKDYTAMDILLGDLKKEGRVMDAQTFGLVAETFVKLGKEDEALG 925

Query: 1106 VFRRYNRARESPE--VVSIFIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEIFYN 933
            +F+  ++ +   +   V+  I +LC+ G+   AE ++       ++            Y 
Sbjct: 926  IFKNLDKYKCFIDEFTVTAIINALCSKGHAKRAEGVV-------WHHKDKVKGVLPCIYR 978

Query: 932  HLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCKA--ANNPGAMFDTGFDI 759
             L+ GWS++   + A++ +Q +K  G  P L  YN +L CLC+    +NP  +     ++
Sbjct: 979  SLLYGWSVQRNVKEARRIIQEMKSNGVNPDLVCYNTFLRCLCERNLRHNPSGLVPEALNV 1038

Query: 758  ISEMNNVGV-PLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXXX 582
            + EM    V P  IS +  L++ L    R   +  + + M K     D+  Y        
Sbjct: 1039 MMEMRFYKVLPTSIS-YNILLSCLGKTRRVKESCQILEAMNKSGVAPDWVSYYLVARVLF 1097

Query: 581  XXXKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL- 405
               ++ + G  +++ + +  +  + +    L+  L  VER + A+ +   +      G  
Sbjct: 1098 LSGRFGK-GKEIVDQMIEKGLVPNHKFYYSLIGILCGVERVNHALELFEKMKGSSLGGYG 1156

Query: 404  -VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEVRDREHP 249
             VYD +I  L   G F++ R +W+EA+  G+ L+   D+LDP+ TEV   + P
Sbjct: 1157 PVYDVLIPKLCRGGAFEKGRELWDEAKCMGITLQCSRDVLDPSITEVYKPKRP 1209


>ref|NP_200945.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75171474|sp|Q9FLJ6.1|PP439_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g61370, mitochondrial; Flags: Precursor
            gi|9757858|dbj|BAB08492.1| unnamed protein product
            [Arabidopsis thaliana] gi|17529064|gb|AAL38742.1| unknown
            protein [Arabidopsis thaliana] gi|23296891|gb|AAN13197.1|
            unknown protein [Arabidopsis thaliana]
            gi|332010076|gb|AED97459.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 487

 Score =  137 bits (344), Expect = 2e-29
 Identities = 103/407 (25%), Positives = 183/407 (44%), Gaps = 10/407 (2%)
 Frame = -2

Query: 1457 VVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAIALPNCKDD 1278
            +V   +G LD +E  LN  ++ P+  +VT+V+ +C  E   RRLLRF +W+         
Sbjct: 43   IVSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLH 102

Query: 1277 PQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIGVFR 1098
             + FN  L V   K+D  AM ++L  ++     +   +F+   +TL+K  K   AIG+F+
Sbjct: 103  DKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFK 162

Query: 1097 RYNR--ARESPEVVSIFIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEI-FYNHL 927
              ++    +    V+  I +LC+ G+   A  ++        + +       E+  Y  L
Sbjct: 163  ILDKFSCPQDGFTVTAIISALCSRGHVKRALGVM--------HHHKDVISGNELSVYRSL 214

Query: 926  VCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCK--AANNPGAMFDTGFDIIS 753
            + GWS++   + A++ +Q +K  G  P L  +N+ L CLC+     NP  +     +I+ 
Sbjct: 215  LFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIML 274

Query: 752  EMNNVGVPLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXXXXXX 573
            EM +  +      +  L++ L    R   +  + ++M +  C  D   Y           
Sbjct: 275  EMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTG 334

Query: 572  KWREDG---DYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL- 405
            ++ +     D ++E  F+   +F  +    L+  L  VER + A+ +   +      G  
Sbjct: 335  RFGKGNQIVDEMIERGFRPERKFYYD----LIGVLCGVERVNFALQLFEKMKRSSVGGYG 390

Query: 404  -VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEV 267
             VYD +I  L   G F++ R +W EA    V L     +LDP+ TEV
Sbjct: 391  QVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSCSISLLDPSVTEV 437


>ref|XP_002866430.1| hypothetical protein ARALYDRAFT_496296 [Arabidopsis lyrata subsp.
            lyrata] gi|297312265|gb|EFH42689.1| hypothetical protein
            ARALYDRAFT_496296 [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score =  136 bits (343), Expect = 2e-29
 Identities = 101/405 (24%), Positives = 187/405 (46%), Gaps = 8/405 (1%)
 Frame = -2

Query: 1457 VVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAIALPNCKDD 1278
            +V   +G LD +E  LN  ++ P+  +VT+V+ +C  E   RRLLRF +W+         
Sbjct: 45   IVSSPIGGLDDLEKNLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSNVH 104

Query: 1277 PQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIGVFR 1098
             + FN  L V   K+D  A+ ++L  ++     +   +F+   +TL+K  K   AIG+F+
Sbjct: 105  DKEFNHVLRVLAEKKDHTAIQILLSDLRQENRAMDKQTFSIVAETLVKIGKEEDAIGIFK 164

Query: 1097 RYNR--ARESPEVVSIFIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEI-FYNHL 927
              ++    +    V+  I +LC+ G+   A  ++        + +       E+  Y  L
Sbjct: 165  ILDKFLCPQDSFTVTAIISALCSRGHVKRALGVM--------HHHKDAISGNELSVYRSL 216

Query: 926  VCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCK--AANNPGAMFDTGFDIIS 753
            + GWS++   + A++ +Q +K  G  P L  +N+ L CLC+     NP  +     +I+ 
Sbjct: 217  LFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIML 276

Query: 752  EMNNVGV-PLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXXXXX 576
            EM +  + P  IS +  L++ L    R   +  + ++M +  C  D   Y          
Sbjct: 277  EMRSYKIQPTSIS-YNILLSCLGRTRRVRESCQILEQMKRSGCDPDTASYYFVVRVLYLT 335

Query: 575  XKWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL--V 402
             ++ + G+ +++ + +  +  + +    L+  L  VER + A+ +   +      G   V
Sbjct: 336  GRFGK-GNQIVDEMIERGLRPEHKFYYDLIGVLCGVERVNFALQLFEKMKRSSVDGYGPV 394

Query: 401  YDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEV 267
            YD +I  L   G F++ + +W EA    V L     +LDP+ TEV
Sbjct: 395  YDLLIPKLCKGGNFEKGKELWEEAMSLNVTLSCSISLLDPSVTEV 439


>gb|AAM65325.1| unknown [Arabidopsis thaliana]
          Length = 487

 Score =  136 bits (343), Expect = 2e-29
 Identities = 103/407 (25%), Positives = 183/407 (44%), Gaps = 10/407 (2%)
 Frame = -2

Query: 1457 VVLYGLGDLDTMEAALNATNIKPTPAVVTEVLTACAEEAVSRRLLRFTNWAIALPNCKDD 1278
            +V   +G LD +E  LN  ++ P+  +VT+V+ +C  E   RRLLRF +W+         
Sbjct: 43   IVSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLH 102

Query: 1277 PQLFNTALSVFIRKQDSKAMDMVLLAIKSNMLLLSMSSFAAAIDTLLKAEKISQAIGVFR 1098
             + FN  L V   K+D  AM ++L  ++     +   +F+   +TL+K  K   AIG+F+
Sbjct: 103  DKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKIGKEEDAIGIFK 162

Query: 1097 RYNR--ARESPEVVSIFIVSLCNHGYPDVAEHILDPKMFSSYYEYSSTPPAKEI-FYNHL 927
              ++    +    V+  I +LC+ G+   A  ++        + +       E+  Y  L
Sbjct: 163  ILDKFSCPQDGFTVTAIISALCSRGHVKRALGVM--------HHHKDVISGNELSVYRSL 214

Query: 926  VCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDCLCK--AANNPGAMFDTGFDIIS 753
            + GWS++   + A++ +Q +K  G  P L  +N+ L CLC+     NP  +     +I+ 
Sbjct: 215  LFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIML 274

Query: 752  EMNNVGVPLHISIFKTLITHLCNGGRPDLAMLVFDEMPKYKCHADYDVYXXXXXXXXXXX 573
            EM +  +      +  L++ L    R   +  + ++M +  C  D   Y           
Sbjct: 275  EMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTG 334

Query: 572  KWREDG---DYLLETLFKARVEFDVEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGL- 405
            ++ +     D ++E  F+   +F  +    L+  L  VER + A+ +   +      G  
Sbjct: 335  RFGKGNQIVDEMIERGFRPERKFYYD----LIGVLCGVERVNFALQLFEKMKRSSVGGYG 390

Query: 404  -VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDILDPAKTEV 267
             VYD +I  L   G F++ R +W EA    V L     +LDP+ TEV
Sbjct: 391  QVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSCSISLLDPSVTEV 437