BLASTX nr result

ID: Ephedra28_contig00018817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00018817
         (769 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDJ10532.1| Rootletin [Hymenolepis microstoma]                     58   4e-06

>emb|CDJ10532.1| Rootletin [Hymenolepis microstoma]
          Length = 2180

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 15/129 (11%)
 Frame = -2

Query: 342  HSESEVLRLTNELNDATTEITHLKSSVNKLQEDLDGSKKDFEASRDKEAM--------LE 187
            + ESE+ R++ E ++AT  I  L+ S+  LQED  G ++   AS+  EA         L 
Sbjct: 1665 NQESELRRVSKERDEATVRIKELQESLQLLQEDSRGIQERLNASKAMEARAAEEQRKELR 1724

Query: 186  SKLKEAEERIASQEEL-------VGHEMNLRALKEEELDASKSKLGVMEEKLANSKKTIS 28
            S LK+AE+R+A  E         + H+  + + K EE+ A K +LG +   L+  ++   
Sbjct: 1725 SSLKDAEDRLAVSESARRSLKADLSHQKAINSDKTEEIKALKVRLGSLTSTLSELERRAE 1784

Query: 27   ELEGDIKSL 1
            E    I+ L
Sbjct: 1785 ETTSAIERL 1793


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