BLASTX nr result
ID: Ephedra28_contig00018770
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00018770
(515 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEG74554.1| predicted protein [Phoenix dactylifera] 89 6e-16
ref|XP_002512712.1| U2 small nuclear ribonucleoprotein A, putati... 87 2e-15
ref|XP_004235867.1| PREDICTED: U2 small nuclear ribonucleoprotei... 87 2e-15
ref|NP_001274939.1| U2 small nuclear ribonucleoprotein A'-like [... 87 2e-15
ref|XP_002303732.1| predicted protein [Populus trichocarpa] gi|5... 86 4e-15
ref|XP_006844771.1| hypothetical protein AMTR_s00016p00258810 [A... 86 5e-15
gb|EMJ25439.1| hypothetical protein PRUPE_ppa018334mg, partial [... 85 9e-15
ref|NP_001239826.1| uncharacterized protein LOC100803110 [Glycin... 84 2e-14
ref|XP_002299368.1| U2 small nuclear ribonucleoprotein A' [Popul... 84 2e-14
ref|XP_006487666.1| PREDICTED: U2 small nuclear ribonucleoprotei... 83 3e-14
ref|XP_006423874.1| hypothetical protein CICLE_v10028992mg [Citr... 83 4e-14
ref|XP_006423873.1| hypothetical protein CICLE_v10028992mg [Citr... 83 4e-14
ref|XP_006423872.1| hypothetical protein CICLE_v10028992mg [Citr... 83 4e-14
gb|EOX94114.1| U2 small nuclear ribonucleoprotein A [Theobroma c... 82 7e-14
gb|ADG27843.1| U2 small nuclear ribonucleoprotein A [Gossypium h... 82 9e-14
ref|NP_001242503.1| uncharacterized protein LOC100779162 [Glycin... 82 9e-14
ref|XP_004489191.1| PREDICTED: U2 small nuclear ribonucleoprotei... 80 2e-13
gb|EXC32355.1| U2 small nuclear ribonucleoprotein A' [Morus nota... 80 3e-13
ref|NP_001046383.1| Os02g0234800 [Oryza sativa Japonica Group] g... 80 3e-13
gb|AFK43933.1| unknown [Lotus japonicus] 80 3e-13
>gb|AEG74554.1| predicted protein [Phoenix dactylifera]
Length = 348
Score = 89.0 bits (219), Expect = 6e-16
Identities = 62/144 (43%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Frame = -1
Query: 509 EMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINVNMDSSENP 330
E PK VAPTPEQI AIKAAI NSQTLEEVARLE AL+SGQ+PA+ + D +V+MD P
Sbjct: 129 EAPKVVAPTPEQITAIKAAIVNSQTLEEVARLEKALKSGQIPAEFQIPDKDVHMD----P 184
Query: 329 VH---DKMDTDEPNKVAATDIGLENQMEASNNQSIEN-RDADETMQNLPENQTVISTDQN 162
H DKMD D N+V ++Q E + IE RD+ N++ S
Sbjct: 185 THAKDDKMDMDGQNEVN----DAQDQKETEDPTPIEQWRDSKLRTSGDMGNESSSSNLST 240
Query: 161 NNAEKEAAKSD---NSAMEE*LPS 99
+N+ + + ++ + E LPS
Sbjct: 241 SNSTESGSSTNLIITTVSSEPLPS 264
>ref|XP_002512712.1| U2 small nuclear ribonucleoprotein A, putative [Ricinus communis]
gi|223548673|gb|EEF50164.1| U2 small nuclear
ribonucleoprotein A, putative [Ricinus communis]
Length = 287
Score = 87.4 bits (215), Expect = 2e-15
Identities = 50/95 (52%), Positives = 65/95 (68%)
Frame = -1
Query: 515 DNEMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINVNMDSSE 336
+ + PK VAPTPEQI+AIKAAI NSQTLEEVARLE AL SGQ+P DLN+ D + +++ +
Sbjct: 193 EQQNPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALNSGQIPTDLNIFDNDSELNTVQ 252
Query: 335 NPVHDKMDTDEPNKVAATDIGLENQMEASNNQSIE 231
DKM TD NK L+ Q + S++ S+E
Sbjct: 253 EK-DDKMATDGDNKTDHEPSNLDEQKD-SDSASME 285
>ref|XP_004235867.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Solanum
lycopersicum]
Length = 286
Score = 87.0 bits (214), Expect = 2e-15
Identities = 48/80 (60%), Positives = 56/80 (70%)
Frame = -1
Query: 500 KKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINVNMDSSENPVHD 321
K VAPTPEQI+AIKAAI NSQTLEEVARLE AL+SGQLPADLN+ D +V E+ D
Sbjct: 197 KPVAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADLNIGDHDVTA-KKEDAKED 255
Query: 320 KMDTDEPNKVAATDIGLENQ 261
KM TD +K + + Q
Sbjct: 256 KMVTDSDDKANKVEENVPEQ 275
>ref|NP_001274939.1| U2 small nuclear ribonucleoprotein A'-like [Solanum tuberosum]
gi|77416949|gb|ABA81870.1| unknown [Solanum tuberosum]
Length = 286
Score = 87.0 bits (214), Expect = 2e-15
Identities = 48/80 (60%), Positives = 56/80 (70%)
Frame = -1
Query: 500 KKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINVNMDSSENPVHD 321
K VAPTPEQI+AIKAAI NSQTLEEVARLE AL+SGQLPADLN+ D +V E+ D
Sbjct: 197 KPVAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADLNIGDHDVTA-KKEDAKED 255
Query: 320 KMDTDEPNKVAATDIGLENQ 261
KM TD +K + + Q
Sbjct: 256 KMVTDSDDKANKAEENVPEQ 275
>ref|XP_002303732.1| predicted protein [Populus trichocarpa]
gi|566256109|ref|XP_006388045.1| U2 small nuclear
ribonucleoprotein A' [Populus trichocarpa]
gi|550309315|gb|ERP46959.1| U2 small nuclear
ribonucleoprotein A' [Populus trichocarpa]
Length = 284
Score = 86.3 bits (212), Expect = 4e-15
Identities = 50/92 (54%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Frame = -1
Query: 515 DNEMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINVNMDSSE 336
+ + PK VAPTPEQI+AIKAAI NSQTLEEVARLE AL SGQLPADL + D D+
Sbjct: 193 EQQAPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALNSGQLPADLKILD-----DTGS 247
Query: 335 NPV---HDKMDTDEPNKVAATDIGLENQMEAS 249
N V DKM TD N+ ++ + EA+
Sbjct: 248 NSVKEQDDKMATDSQNEAEPNNLEEQKDNEAT 279
>ref|XP_006844771.1| hypothetical protein AMTR_s00016p00258810 [Amborella trichopoda]
gi|548847242|gb|ERN06446.1| hypothetical protein
AMTR_s00016p00258810 [Amborella trichopoda]
Length = 300
Score = 85.9 bits (211), Expect = 5e-15
Identities = 48/97 (49%), Positives = 61/97 (62%)
Frame = -1
Query: 509 EMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINVNMDSSENP 330
E PK PTPEQI+AIKAAI NSQTLEEVARLE AL+SGQLPADL + D++ +
Sbjct: 194 EPPKVSGPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLKIPDVDKATIAEHVE 253
Query: 329 VHDKMDTDEPNKVAATDIGLENQMEASNNQSIENRDA 219
D MDT+ KV +Q++ N+ +N +A
Sbjct: 254 SDDPMDTEGQEKVNDVPKDDADQLQTDNSGQPQNDNA 290
>gb|EMJ25439.1| hypothetical protein PRUPE_ppa018334mg, partial [Prunus persica]
Length = 285
Score = 85.1 bits (209), Expect = 9e-15
Identities = 49/85 (57%), Positives = 57/85 (67%), Gaps = 11/85 (12%)
Frame = -1
Query: 515 DNEMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSD-------IN 357
+ + PK VAPTPEQI+AIKAAI NSQTLEEVARLE AL+SGQLPADL + D +
Sbjct: 193 EQQTPKVVAPTPEQIMAIKAAIVNSQTLEEVARLEQALKSGQLPADLKILDDDTETNSVK 252
Query: 356 VNMD----SSENPVHDKMDTDEPNK 294
VN D +SEN + D DE K
Sbjct: 253 VNDDKMEVNSENEANAPKDVDEQKK 277
>ref|NP_001239826.1| uncharacterized protein LOC100803110 [Glycine max]
gi|255635750|gb|ACU18224.1| unknown [Glycine max]
Length = 287
Score = 83.6 bits (205), Expect = 2e-14
Identities = 50/101 (49%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Frame = -1
Query: 515 DNEMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADL-NLSDINVNMDSS 339
+ + PK VAPTPEQI+AIKAAI NSQTLEEVARLE AL+SGQLPADL +LSD N+ +D+
Sbjct: 193 EQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLISLSD-NIMLDNV 251
Query: 338 ENPVHDKMDTDEPNKVAATDIGLENQMEASNNQSIENRDAD 216
+ D + D +Q + +N + E R+ D
Sbjct: 252 DEKHEDMIHDD------------RSQADGKSNDTQEQRNTD 280
>ref|XP_002299368.1| U2 small nuclear ribonucleoprotein A' [Populus trichocarpa]
gi|222846626|gb|EEE84173.1| U2 small nuclear
ribonucleoprotein A' [Populus trichocarpa]
Length = 284
Score = 83.6 bits (205), Expect = 2e-14
Identities = 47/89 (52%), Positives = 58/89 (65%)
Frame = -1
Query: 515 DNEMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINVNMDSSE 336
+ + PK VAPTP+QI+AIKAAI NSQTLEEVARLE AL SGQLPADL + D + E
Sbjct: 193 EQQAPKVVAPTPDQIIAIKAAIVNSQTLEEVARLEKALNSGQLPADLKILDGTGSNSVKE 252
Query: 335 NPVHDKMDTDEPNKVAATDIGLENQMEAS 249
DKM TD N+ ++ + EA+
Sbjct: 253 Q--DDKMATDNQNEAEPNNLEEQKDNEAT 279
>ref|XP_006487666.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Citrus
sinensis]
Length = 286
Score = 83.2 bits (204), Expect = 3e-14
Identities = 48/86 (55%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = -1
Query: 515 DNEMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINV-NMDSS 339
+ + PK VAPTPEQI+AIKAAI NSQTLEEVARLE L+SGQLPADL + D + + D
Sbjct: 192 EQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLPADLKIPDYDSGSKDVK 251
Query: 338 ENPVHDKMDTDEPNKVAATDIGLENQ 261
EN +KM D N+ +ENQ
Sbjct: 252 EN--DEKMVPDVENEADVEPNNVENQ 275
>ref|XP_006423874.1| hypothetical protein CICLE_v10028992mg [Citrus clementina]
gi|557525808|gb|ESR37114.1| hypothetical protein
CICLE_v10028992mg [Citrus clementina]
Length = 286
Score = 82.8 bits (203), Expect = 4e-14
Identities = 48/86 (55%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = -1
Query: 515 DNEMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINV-NMDSS 339
+ + PK VAPTPEQI+AIKAAI NSQTLEEVARLE L+SGQLPADL + D + + D
Sbjct: 192 EQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEEVLKSGQLPADLKIPDYDSGSKDVK 251
Query: 338 ENPVHDKMDTDEPNKVAATDIGLENQ 261
EN +KM D N+ +ENQ
Sbjct: 252 EN--DEKMVPDVENEADVEPNNVENQ 275
>ref|XP_006423873.1| hypothetical protein CICLE_v10028992mg [Citrus clementina]
gi|557525807|gb|ESR37113.1| hypothetical protein
CICLE_v10028992mg [Citrus clementina]
Length = 282
Score = 82.8 bits (203), Expect = 4e-14
Identities = 48/86 (55%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = -1
Query: 515 DNEMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINV-NMDSS 339
+ + PK VAPTPEQI+AIKAAI NSQTLEEVARLE L+SGQLPADL + D + + D
Sbjct: 188 EQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEEVLKSGQLPADLKIPDYDSGSKDVK 247
Query: 338 ENPVHDKMDTDEPNKVAATDIGLENQ 261
EN +KM D N+ +ENQ
Sbjct: 248 EN--DEKMVPDVENEADVEPNNVENQ 271
>ref|XP_006423872.1| hypothetical protein CICLE_v10028992mg [Citrus clementina]
gi|557525806|gb|ESR37112.1| hypothetical protein
CICLE_v10028992mg [Citrus clementina]
Length = 250
Score = 82.8 bits (203), Expect = 4e-14
Identities = 48/86 (55%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = -1
Query: 515 DNEMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINV-NMDSS 339
+ + PK VAPTPEQI+AIKAAI NSQTLEEVARLE L+SGQLPADL + D + + D
Sbjct: 156 EQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEEVLKSGQLPADLKIPDYDSGSKDVK 215
Query: 338 ENPVHDKMDTDEPNKVAATDIGLENQ 261
EN +KM D N+ +ENQ
Sbjct: 216 EN--DEKMVPDVENEADVEPNNVENQ 239
>gb|EOX94114.1| U2 small nuclear ribonucleoprotein A [Theobroma cacao]
Length = 286
Score = 82.0 bits (201), Expect = 7e-14
Identities = 48/80 (60%), Positives = 55/80 (68%), Gaps = 5/80 (6%)
Frame = -1
Query: 515 DNEMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNL--SDINVNM-D 345
+ +MPK VAPTPEQILAIKAAI NSQTLEEVARLE AL++GQLPADL + D N+
Sbjct: 193 EEQMPKVVAPTPEQILAIKAAIVNSQTLEEVARLEKALKTGQLPADLKIPGDDTGANVTG 252
Query: 344 SSENPVHDKMDTD--EPNKV 291
E V D + EPN V
Sbjct: 253 KDEKKVSDSQNKSNVEPNNV 272
>gb|ADG27843.1| U2 small nuclear ribonucleoprotein A [Gossypium hirsutum]
Length = 285
Score = 81.6 bits (200), Expect = 9e-14
Identities = 49/110 (44%), Positives = 62/110 (56%)
Frame = -1
Query: 515 DNEMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINVNMDSSE 336
+ +MPK VAPTPEQILAIKAAI NSQTLEEVARLE AL++GQLPADL
Sbjct: 193 EEQMPKVVAPTPEQILAIKAAIVNSQTLEEVARLEKALQTGQLPADL------------- 239
Query: 335 NPVHDKMDTDEPNKVAATDIGLENQMEASNNQSIENRDADETMQNLPENQ 186
K+ D+ N D + ++ +N +N D D+ + P Q
Sbjct: 240 -----KIPGDDTNAAKGGDEKKVSDIQNESNVEPDNMDEDKNEEPAPMEQ 284
>ref|NP_001242503.1| uncharacterized protein LOC100779162 [Glycine max]
gi|255647036|gb|ACU23986.1| unknown [Glycine max]
Length = 276
Score = 81.6 bits (200), Expect = 9e-14
Identities = 42/65 (64%), Positives = 52/65 (80%)
Frame = -1
Query: 515 DNEMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINVNMDSSE 336
+ +MPK VAPTPEQI+AIKAAI N QTLEEVARLE AL+SGQLPADL L +++ + E
Sbjct: 189 EQQMPKVVAPTPEQIIAIKAAIVNFQTLEEVARLEKALKSGQLPADLLLDNVD---EKHE 245
Query: 335 NPVHD 321
+ +HD
Sbjct: 246 DMIHD 250
>ref|XP_004489191.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like isoform X1
[Cicer arietinum]
Length = 280
Score = 80.5 bits (197), Expect = 2e-13
Identities = 46/85 (54%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
Frame = -1
Query: 515 DNEMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINVNMD--- 345
+ + PK APTPEQI+AIKAAI NSQTLEEVARLE AL+SGQLPADL ++ +D
Sbjct: 193 EQQTPKVSAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLKSLTDDIMLDKVD 252
Query: 344 -SSENPVH-DKMDTDEPNKVAATDI 276
E+ VH + DT EP T +
Sbjct: 253 EKHEDVVHAESNDTQEPKNTDGTQM 277
>gb|EXC32355.1| U2 small nuclear ribonucleoprotein A' [Morus notabilis]
Length = 315
Score = 80.1 bits (196), Expect = 3e-13
Identities = 43/66 (65%), Positives = 47/66 (71%)
Frame = -1
Query: 500 KKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINVNMDSSENPVHD 321
K VAPTPEQI AIKAAI NSQTLEEVARLE AL+SGQLPAD LSD N S +
Sbjct: 201 KVVAPTPEQITAIKAAIVNSQTLEEVARLEKALKSGQLPADFKLSDDNAQSGSIQGTDES 260
Query: 320 KMDTDE 303
K+ +E
Sbjct: 261 KVQNNE 266
>ref|NP_001046383.1| Os02g0234800 [Oryza sativa Japonica Group]
gi|50251223|dbj|BAD27667.1| putative U2 snRNP protein A'
[Oryza sativa Japonica Group]
gi|113535914|dbj|BAF08297.1| Os02g0234800 [Oryza sativa
Japonica Group] gi|215697898|dbj|BAG92091.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218190368|gb|EEC72795.1| hypothetical protein
OsI_06481 [Oryza sativa Indica Group]
gi|222622491|gb|EEE56623.1| hypothetical protein
OsJ_06008 [Oryza sativa Japonica Group]
Length = 284
Score = 80.1 bits (196), Expect = 3e-13
Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = -1
Query: 515 DNEMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINVNM-DSS 339
+ + PK VAPTPEQI AIKAAI NSQTLEEVARLE AL +GQ+PA+ + + NM D+S
Sbjct: 193 EEQGPKVVAPTPEQITAIKAAIVNSQTLEEVARLEKALSTGQIPAEFAIPKPDANMADAS 252
Query: 338 ENPVHDKMDTDEPNKVAATDIGLENQ 261
E +KM+TD N+ D +N+
Sbjct: 253 EET--EKMETDGQNQENGADEKKQNE 276
>gb|AFK43933.1| unknown [Lotus japonicus]
Length = 280
Score = 80.1 bits (196), Expect = 3e-13
Identities = 44/78 (56%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
Frame = -1
Query: 515 DNEMPKKVAPTPEQILAIKAAIANSQTLEEVARLEMALRSGQLPADLNLSDINVNMDS-- 342
+ + PK VAPTPEQI+AIKAAI NSQTLEEVARLE AL+SG LP DL + NV +D+
Sbjct: 193 EQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGLLPEDLKSLNGNVTLDNVN 252
Query: 341 --SENPVHDKMDTDEPNK 294
E+ VHD+ + K
Sbjct: 253 EKGEDVVHDESNDTREQK 270