BLASTX nr result

ID: Ephedra28_contig00018715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00018715
         (910 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004355881.1| sentrin/SUMO-specific protease [Dictyosteliu...    65   3e-08
ref|XP_629677.1| hypothetical protein DDB_G0292290 [Dictyosteliu...    62   2e-07
ref|XP_004368193.1| Ulp1 protease family, Cterminal catalytic do...    59   2e-06
ref|XP_002499446.1| predicted protein [Micromonas sp. RCC299] gi...    59   3e-06
ref|XP_006384102.1| hypothetical protein POPTR_0004s06880g [Popu...    57   7e-06
ref|XP_003288590.1| hypothetical protein DICPUDRAFT_55498 [Dicty...    57   9e-06

>ref|XP_004355881.1| sentrin/SUMO-specific protease [Dictyostelium fasciculatum]
           gi|328869019|gb|EGG17397.1| sentrin/SUMO-specific
           protease [Dictyostelium fasciculatum]
          Length = 768

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
 Frame = +3

Query: 198 ENILVPICDGSHWFLLQIFGKEG---YGRLLNSDIHCKLGENIALLIERWWRVDSLHEG- 365
           + +++PI  G+HW L  +  KE    Y   L  D +  LG     L +    VD   EG 
Sbjct: 646 DKVVMPIHLGAHWCLAVVNLKEKRFEYYDSLGGDNYTCLGHLKQWLTDEM--VDKKKEGV 703

Query: 366 LNPKKFSLLIPTDIPHQDNPHDCGVFVLKFIECIMSGREFEFTGRDVTDFRRTM 527
           +N  +F++ IP DIPHQ N  DCGVF  KF +    G    FT +D+T FR+ M
Sbjct: 704 INLSQFTMHIPKDIPHQLNGFDCGVFTCKFADLSSRGLPLNFTQKDITLFRKLM 757


>ref|XP_629677.1| hypothetical protein DDB_G0292290 [Dictyostelium discoideum AX4]
           gi|60463074|gb|EAL61269.1| hypothetical protein
           DDB_G0292290 [Dictyostelium discoideum AX4]
          Length = 769

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
 Frame = +3

Query: 186 LAETENILVPICDGSHWFLLQIFGK----EGYGRLLNSDIHC--KLGENIALLIERWWRV 347
           L E + I++PI  G+HW L  I  K    E Y  LL S+  C  KL + I+  +E     
Sbjct: 643 LFEMDKIIIPIHLGNHWCLAVINFKAKQFEYYDSLLGSNKECLKKLRKYISDEME----- 697

Query: 348 DSLHEG-LNPKKFSLLIPTDIPHQDNPHDCGVFVLKFIECIMSGREFEFTGRDVTDFRRT 524
           +   EG +N  +F   +P +IP Q N +DCGVF+ K+ E    G    FT  ++T +RR 
Sbjct: 698 NKKKEGAVNLDEFQDYMPKEIPIQQNGYDCGVFMCKYAEFCSKGANLTFTQEEITQYRRR 757

Query: 525 M 527
           M
Sbjct: 758 M 758


>ref|XP_004368193.1| Ulp1 protease family, Cterminal catalytic domain containing protein
           [Acanthamoeba castellanii str. Neff]
           gi|440804561|gb|ELR25438.1| Ulp1 protease family,
           Cterminal catalytic domain containing protein
           [Acanthamoeba castellanii str. Neff]
          Length = 629

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 11/132 (8%)
 Frame = +3

Query: 180 LPLAETENILVPICDGSHWFL----LQIFGKEGYGRLLNSDIHCKLGENIALLIERWWRV 347
           + L   + ++VPI  G+HW L    LQ    E Y  L +S+  C         ++R  R 
Sbjct: 503 IDLFAMDRVVVPIHLGNHWCLAVINLQDRRFEYYDSLGSSNREC---------LQRLRRY 553

Query: 348 DSLHEGLNPKKFSLLI-------PTDIPHQDNPHDCGVFVLKFIECIMSGREFEFTGRDV 506
               E  + KK  L +       P DIP Q N +DCGVF  KF ECI SGR F F+  D+
Sbjct: 554 LQ-DEARDKKKIELDLADWGDHQPKDIPLQKNGYDCGVFACKFAECIASGRPFYFSQVDM 612

Query: 507 TDFRRTMFRNLL 542
             +R+ M  ++L
Sbjct: 613 PIYRKRMMVSIL 624


>ref|XP_002499446.1| predicted protein [Micromonas sp. RCC299] gi|226514708|gb|ACO60704.1|
            predicted protein [Micromonas sp. RCC299]
          Length = 869

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
 Frame = +3

Query: 141  GLIPELRKKCKIVLPLAETENILVPICDGSHWFL--LQIFGK--EGYGRLLNSDIHCKLG 308
            G +     K K+   + E + +++P+  G HW L  + +  K    Y  LL  D    L 
Sbjct: 731  GAVRRWTTKKKLGYDVLECDKVIIPVHQGIHWVLAVIDLAAKCVRFYDSLLGDDKG--LV 788

Query: 309  ENIALLIERWWRVDSLHEGLNPKKFSLLIPTDIPHQDNPHDCGVFVLKFIECIMSGREFE 488
            E++   +   W+ +     ++ + +S+ IP DIP Q N  DCGVF+LK+ + I +G    
Sbjct: 789  EDLLRWVRDEWK-NKKDADVDTESWSVEIPKDIPRQMNGCDCGVFMLKYADYIATGCPLT 847

Query: 489  FTGRDVTDFRR 521
            F  RD+  FRR
Sbjct: 848  FHQRDMEYFRR 858


>ref|XP_006384102.1| hypothetical protein POPTR_0004s06880g [Populus trichocarpa]
           gi|550340486|gb|ERP61899.1| hypothetical protein
           POPTR_0004s06880g [Populus trichocarpa]
          Length = 154

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 7/131 (5%)
 Frame = +3

Query: 168 CKIVLPLAETENILVPICDGSHWFLLQIFGKEGYGRL----LNSDIHCKLGENIALLIER 335
           C  +  +A T  + +P+C  +HW L+ +   E  G L    LNS       E   +    
Sbjct: 7   CINIEEIAGTSKLFIPLCLENHWILICV-DMEKRGLLWLDSLNSPPDAHHTEKATI---S 62

Query: 336 WWRVDSLHEGL---NPKKFSLLIPTDIPHQDNPHDCGVFVLKFIECIMSGREFEFTGRDV 506
            W V  L   L   N +++  L   DIP+Q N  DCG+FV+K+ +C+     F FT +D+
Sbjct: 63  EWLVKHLLPVLGYRNSQQWKFLQLKDIPYQTNRIDCGIFVMKYADCLAHCDHFPFTQQDM 122

Query: 507 TDFRRTMFRNL 539
             FR  +F ++
Sbjct: 123 PHFRLRVFLDI 133


>ref|XP_003288590.1| hypothetical protein DICPUDRAFT_55498 [Dictyostelium purpureum]
           gi|325081380|gb|EGC34898.1| hypothetical protein
           DICPUDRAFT_55498 [Dictyostelium purpureum]
          Length = 240

 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
 Frame = +3

Query: 198 ENILVPICDGSHWFLLQIFGKEGYGRLLNSDIHCKLGENIALL--IERWWRVDSLHEG-- 365
           + +++P+  G+HW    I  K+   +  +S     LG+N   L  + R+   + ++    
Sbjct: 118 DKVILPVHLGNHWCCAVINFKDKQFQYFDS----LLGDNRECLKKLRRYVADEMVNRSKQ 173

Query: 366 --LNPKKFSLLIPTDIPHQDNPHDCGVFVLKFIECIMSGREFEFTGRDVTDFRR 521
             +N  +F   IP DIP Q N +DCGVF+ K+ E    G E  FT +D+T +RR
Sbjct: 174 GIVNLDEFKDSIPKDIPIQSNGYDCGVFMCKYAEFSSRGSELNFTQKDITQYRR 227


Top