BLASTX nr result

ID: Ephedra28_contig00018666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00018666
         (1088 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE48516.1| APETALA2-like protein [Gnetum parvifolium]            132   2e-28

>dbj|BAE48516.1| APETALA2-like protein [Gnetum parvifolium]
          Length = 480

 Score =  132 bits (333), Expect = 2e-28
 Identities = 105/254 (41%), Positives = 140/254 (55%), Gaps = 34/254 (13%)
 Frame = +1

Query: 424  PTIDHNNSII--KNKVVPTT-SFPDIPEWKKARLHYPPRLEDCIPETH--HIFDSQPLLK 588
            P+ D++++ +  K K  PT  +F D PEWKKARLHY PR +D + +TH   IFD QPL+K
Sbjct: 240  PSNDYSSTNVSTKPKQQPTCINFSDNPEWKKARLHY-PRADDSVHQTHFGQIFDPQPLVK 298

Query: 589  FQKIVSFGEPGTE-DDQRYIMECNLAPV---KGLHQESRSNMAGSRSVVAWMPTTTSSGN 756
            FQKI+SFG   +E +DQR IMECNL P+   K  +Q    + +G RS+++W+        
Sbjct: 299  FQKILSFGGLDSEAEDQRLIMECNLGPMANGKSQNQNQNQDRSG-RSLLSWLA------- 350

Query: 757  GPDQLQHQQVGSVAMPWQLQGPRP----ATVFPIAASSRFSPQFLSTSDWLLHP------ 906
            G +Q Q QQ       WQLQG RP    ATVF  AASS FSPQ LS S     P      
Sbjct: 351  GSEQQQQQQ------SWQLQGSRPTGATATVFSFAASSGFSPQMLSASPASSFPSHHPER 404

Query: 907  -----VAAAAP----GTSHFSN--AYYHKPNGVVPMHGR---HLPPPDNFLSLSGEAS-C 1041
                 V AA P    G++  +N  A +++     P   R   +    DN LSLS ++S  
Sbjct: 405  LSHHLVTAATPNLIGGSAPAANDSAXFYQKGSXAPTAXRSREYTATTDNXLSLSSDSSRS 464

Query: 1042 KTKTKELLADLHIR 1083
            K+KT  LL DL ++
Sbjct: 465  KSKTDLLLCDLQLK 478


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