BLASTX nr result

ID: Ephedra28_contig00018650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00018650
         (465 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ95970.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   3e-06

>dbj|BAJ95970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1103

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 11/165 (6%)
 Frame = +2

Query: 2    PLIHLSDGENEK--------QNLDIHDPFVASESLLMTRKDALESWLETDIPTSKLTVEE 157
            PLIH+ DG  ++        +NL      ++++   +  K ALESWL+ + P + L V++
Sbjct: 759  PLIHMYDGNVDQAYAGRAVDENLA---SLISTDLTELMSKSALESWLD-EAPAAPL-VQD 813

Query: 158  SSISGCADLSIG--EVDVVPRKXXXXXXXXXXXXXIMYAYSKEPSAHSASTLCINLYFKN 331
            S  + CA +S      +  P+              ++YA+S E SA S   +C++L+ +N
Sbjct: 814  SVQTSCARVSFTTRSFERKPKLHRLLDPSDSDGLSVLYAFSSEVSAKSRLLVCVDLFVEN 873

Query: 332  HSMERLSNIVVRSNE-STTLLQMEQESSGKADTQGEISSESLEAI 463
             + E+L++I ++S E S +   M+Q   G A     +  E ++++
Sbjct: 874  VTTEQLADITIKSEEASGSKAGMDQTPEGSASIPTLVPVEEIQSL 918


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