BLASTX nr result
ID: Ephedra28_contig00018609
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00018609
(712 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis] ... 155 1e-35
ref|XP_004304651.1| PREDICTED: zinc finger CCCH domain-containin... 154 2e-35
ref|XP_006827349.1| hypothetical protein AMTR_s00011p00062910 [A... 150 4e-34
gb|EOY02483.1| Zinc finger family protein / RNA recognition moti... 143 6e-32
ref|XP_002324006.1| hypothetical protein POPTR_0017s10830g [Popu... 142 1e-31
gb|EXC20328.1| Zinc finger CCCH domain-containing protein 41 [Mo... 141 2e-31
gb|EMJ18263.1| hypothetical protein PRUPE_ppa001047mg [Prunus pe... 137 3e-30
gb|EEE60912.1| hypothetical protein OsJ_14616 [Oryza sativa Japo... 136 8e-30
sp|Q0JDM0.2|C3H27_ORYSJ RecName: Full=Zinc finger CCCH domain-co... 136 8e-30
emb|CAH66461.1| H0718E12.5 [Oryza sativa Indica Group] 136 8e-30
ref|NP_001052653.1| Os04g0394300 [Oryza sativa Japonica Group] g... 136 8e-30
emb|CAD40551.1| OSJNBa0072K14.6 [Oryza sativa Japonica Group] 136 8e-30
ref|XP_006652220.1| PREDICTED: zinc finger CCCH domain-containin... 135 2e-29
ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containin... 135 2e-29
emb|CBI34878.3| unnamed protein product [Vitis vinifera] 135 2e-29
ref|XP_006341318.1| PREDICTED: zinc finger CCCH domain-containin... 134 2e-29
ref|XP_006338591.1| PREDICTED: zinc finger CCCH domain-containin... 134 2e-29
ref|XP_002300018.2| RNA recognition motif-containing family prot... 132 8e-29
ref|XP_004252213.1| PREDICTED: zinc finger CCCH domain-containin... 132 8e-29
ref|XP_001785787.1| predicted protein [Physcomitrella patens] gi... 132 1e-28
>ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis]
gi|223536016|gb|EEF37674.1| rrm/rnp domain, putative
[Ricinus communis]
Length = 972
Score = 155 bits (392), Expect = 1e-35
Identities = 93/235 (39%), Positives = 130/235 (55%), Gaps = 4/235 (1%)
Frame = -1
Query: 706 PIAVPVVQKQESAFDTLKRIREKQEMLARKREEFRKNLEKLAKQGTGNKAESADKNMGLK 527
P P +QK+ + +R+KQE+LA+KR +FR+ L+KL KQ TG K E + K
Sbjct: 633 PKVPPPLQKKLELEQLKEELRKKQELLAQKRNDFRRQLDKLEKQATGVKGEVVVEPAA-K 691
Query: 526 QHRAELNTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSESGQNQISTSVISNQANFQA 347
+HR + T K +L S + G+N + S S +N S + Q
Sbjct: 692 RHRVGMATDIVKVPTLRSSGHVLGVPSPRGENKSFENPMSSSPKNNASLMQQETTGSRQP 751
Query: 346 LPKSAKVAVSCHPGMKVSPNRFKLDNRTTVFRILPPLPDGLLNIDSVKDHFASFGGVNSV 167
+ G S NRFKLDNR T FRI+PPLP GL N+D +K+HF+S+G +++V
Sbjct: 752 IRPVGPA------GAPFSVNRFKLDNRPTTFRIIPPLPPGLTNVDVLKEHFSSYGDLSTV 805
Query: 166 EFEDSKGECIDPTTISE----TCSLRVTYSTRRAAEKAFLEGRCWNGQSLQFSWV 14
E ED+ E D SE +CS +TY+TRR+AE+AFL G+CW G+ LQF WV
Sbjct: 806 ELEDA--EACDDNDGSEVPKKSCSALLTYATRRSAERAFLNGKCWQGKDLQFMWV 858
>ref|XP_004304651.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Fragaria vesca subsp. vesca]
Length = 929
Score = 154 bits (390), Expect = 2e-35
Identities = 95/239 (39%), Positives = 134/239 (56%), Gaps = 4/239 (1%)
Frame = -1
Query: 706 PIAVPVVQKQESAFDTLKRIREKQEMLARKREEFRKNLEKLAKQGTGNKAESADKNMGLK 527
P A P+ +K E+ + +R+KQEML +KR +FR+ L KL KQG G K E AD + K
Sbjct: 615 PKAPPLQKKLENLEQLKEELRKKQEMLDQKRNDFRRQLYKLEKQG-GPKGE-ADTELAAK 672
Query: 526 QHRAELNTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSESGQNQISTSVISNQA-NFQ 350
+ + L DK + S T + L D +K ++SG +S S ++ A Q
Sbjct: 673 RRKVGLAADADKVATPSSSSPTPTPVSALADEMLTDK--NQSGDTVVSHSPKASTAMTLQ 730
Query: 349 ALP--KSAKVAVSCHPGMKVSPNRFKLDNRTTVFRILPPLPDGLLNIDSVKDHFASFGGV 176
P K + S G V NR+KLDNR T FRILPPLP G N+ +K+HF G +
Sbjct: 731 QSPTLKHQMIRPSVPLGTPVPLNRYKLDNRPTGFRILPPLPSGFANVTVIKEHFVPCGDI 790
Query: 175 NSVEFEDSKG-ECIDPTTISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQFSWVALTN 2
++VE ED + + IS+ CS R+T++TRR+AEKAFL G+CW G L+F W+ +N
Sbjct: 791 SNVELEDLESRDSSSELDISKKCSARITFATRRSAEKAFLNGKCWEGCDLKFVWLTSSN 849
>ref|XP_006827349.1| hypothetical protein AMTR_s00011p00062910 [Amborella trichopoda]
gi|548831784|gb|ERM94586.1| hypothetical protein
AMTR_s00011p00062910 [Amborella trichopoda]
Length = 1144
Score = 150 bits (379), Expect = 4e-34
Identities = 91/242 (37%), Positives = 137/242 (56%), Gaps = 5/242 (2%)
Frame = -1
Query: 712 SRPIAVPVVQKQESAFDTLKR-IREKQEMLARKREEFRKNLEKLAKQGTGNKAESADKNM 536
S+P+ P QK+ + LK +R KQEMLA+KR +FRK L+KL KQG K E+A ++
Sbjct: 821 SKPL--PPSQKKLETLEHLKEELRIKQEMLAQKRSDFRKQLDKLEKQGLAVKGETATDHV 878
Query: 535 GLKQHRAELNTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSESGQNQISTSVISNQAN 356
G +Q +T S V S ++ SG + +S +
Sbjct: 879 GKRQKT--------ETVSAVSCTSNPTQVSNHSPGTESVVAKGNSGDS-VSAKSLKEHMG 929
Query: 355 FQALPKSAKVAVSCHPGMKVSP---NRFKLDNRTTVFRILPPLPDGLLNIDSVKDHFASF 185
QA PK +K P + SP NR+KLDNR T F+ILPPLP GL N +K+HFA+F
Sbjct: 930 PQASPKGSKQPSRLAPSVS-SPFLINRYKLDNRPTAFKILPPLPTGLANATVLKEHFAAF 988
Query: 184 GGVNSVEFEDSKGEC-IDPTTISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQFSWVAL 8
G ++ V+ ++ + D + +++ CS+ +T++TR +AE+AFL G+CW GQ+LQF+W+
Sbjct: 989 GDLSFVDLDEQDDQIDNDASKLAKDCSVHITFTTRHSAERAFLGGKCWQGQNLQFAWIIP 1048
Query: 7 TN 2
+N
Sbjct: 1049 SN 1050
>gb|EOY02483.1| Zinc finger family protein / RNA recognition motif-containing
protein, putative [Theobroma cacao]
Length = 941
Score = 143 bits (360), Expect = 6e-32
Identities = 80/240 (33%), Positives = 137/240 (57%), Gaps = 5/240 (2%)
Frame = -1
Query: 706 PIAVPVVQKQESAFDTLKR-IREKQEMLARKREEFRKNLEKLAKQGTGNKAESADKNMGL 530
P P +QK+ + +K +R+KQEML +KR +FR+ L+KL KQ +G K + +
Sbjct: 626 PKVPPPLQKKFETLEQMKEELRKKQEMLEQKRNDFRRQLDKLEKQSSGVKGDLMTEQAA- 684
Query: 529 KQHRAELNTSPDKTDSLVKSE--STVERIMGLGDNDTVNKTSSESGQNQISTSVISNQAN 356
K+ + + P K + + SE ++ +G + T + + S + ++ Q +
Sbjct: 685 KRQKVGIAADPAKASTPMSSEPGASAATPCTIGMTEKNKSTENVVSHSPKSNTTMALQES 744
Query: 355 FQALPKSAKVAVSCHPGMKVSPNRFKLDNRTTVFRILPPLPDGLLNIDSVKDHFASFGGV 176
+ +S A + HP + NR+KLDNR FR++PPLP G ++D++K+HF +G +
Sbjct: 745 MSSKQQSRPSAPAGHPFLM---NRYKLDNRPPAFRVIPPLPSGFADVDALKEHFLQYGDL 801
Query: 175 NSVEFE--DSKGECIDPTTISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQFSWVALTN 2
+VE E ++ G+ + + + CS +TYSTRRAAE+AF+ G+CW G +LQF+W+ T+
Sbjct: 802 FAVELEEVENDGDGLGSEAL-KNCSALITYSTRRAAERAFVNGKCWQGNNLQFTWLTSTS 860
>ref|XP_002324006.1| hypothetical protein POPTR_0017s10830g [Populus trichocarpa]
gi|222867008|gb|EEF04139.1| hypothetical protein
POPTR_0017s10830g [Populus trichocarpa]
Length = 964
Score = 142 bits (358), Expect = 1e-31
Identities = 87/237 (36%), Positives = 137/237 (57%), Gaps = 6/237 (2%)
Frame = -1
Query: 706 PIAVPVVQKQESAFDTLKRIREKQEMLARKREEFRKNLEKLAKQGTGNKAESADKNMGLK 527
P P +QK ES + +R+KQE+L +KR +FR+ L+KL KQ TG K E + K
Sbjct: 622 PKVPPPMQKLESLEQLKEELRKKQELLDQKRNDFRRQLDKLEKQATGVKGEVTAEPAS-K 680
Query: 526 QHRAELNTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSESGQNQISTSVISNQANFQA 347
+H+ + S +VK+ + G +++ +N +S+S S A
Sbjct: 681 RHKTGIPAS-----DIVKAATPRSADPGSASPHAEMVDKNKTVENVVSSS--SKTCVMMA 733
Query: 346 LPKSAKVAVSCHPGMKVSP----NRFKLDNRTTVFRILPPLPDGLLNIDSVKDHFASFGG 179
L SA S HP V P N++KLDNR T F+I+ PLP GL N+ ++K++F+S+G
Sbjct: 734 LQDSAGSKPSIHPLAPVGPPFLMNKYKLDNRPTAFKIISPLPAGLANVATLKEYFSSYGD 793
Query: 178 VNSVEFED--SKGECIDPTTISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQFSWV 14
+++VE ED S + + T+ + CS VT++TRR+AE+AFL G+CW G++L+F+W+
Sbjct: 794 LSAVELEDEPSDYDGVGSETL-KNCSACVTFTTRRSAERAFLNGKCWQGKNLKFAWL 849
>gb|EXC20328.1| Zinc finger CCCH domain-containing protein 41 [Morus notabilis]
Length = 930
Score = 141 bits (356), Expect = 2e-31
Identities = 88/234 (37%), Positives = 131/234 (55%), Gaps = 6/234 (2%)
Frame = -1
Query: 697 VPVVQKQESAFDTLKR-IREKQEMLARKREEFRKNLEKLAKQGTGNKAESADKNMGLKQH 521
VP +QK+ + + LK +R+KQEML +KR +FR+ L+KL KQ TG K +S D K+
Sbjct: 617 VPPLQKKLGSLEQLKEELRKKQEMLEQKRNDFRRKLDKLEKQATGIKGDS-DTEQVAKRP 675
Query: 520 RAELNTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSE---SGQNQISTSV-ISNQANF 353
+ + K + S+S I D T S + S + +T+V +S
Sbjct: 676 KVGIAVDVAKASTPRSSDSGPIAISPHADTMTDKNKSGDKIVSHSPKTNTTVGLSESMTS 735
Query: 352 QALPKSAKVAVSCHPGMKVSPNRFKLDNRTTVFRILPPLPDGLLNIDSVKDHFASFGGVN 173
+ P VAV G NR+KLDNR T FRILPPLP G N+ V++HF +G ++
Sbjct: 736 KQHPVRPFVAV----GSPFLVNRYKLDNRPTAFRILPPLPAGFTNVAVVREHFLQYGDIS 791
Query: 172 SVEFEDSKG-ECIDPTTISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQFSWV 14
+VE ED +G + + +S+ CS V + TRR+AE+AF+ G+CW G +L+F W+
Sbjct: 792 NVELEDVEGYDGSSESEVSKDCSAHVNFVTRRSAERAFINGKCWQGHNLKFMWL 845
>gb|EMJ18263.1| hypothetical protein PRUPE_ppa001047mg [Prunus persica]
Length = 924
Score = 137 bits (345), Expect = 3e-30
Identities = 81/234 (34%), Positives = 124/234 (52%), Gaps = 3/234 (1%)
Frame = -1
Query: 706 PIAVPVVQKQESAFDTLKRIREKQEMLARKREEFRKNLEKLAKQGTGNKAESADKNMGLK 527
P A P+ +K E+ + +R+KQEML +KR +FR+ L+KL KQ TG K E AD K
Sbjct: 607 PKAPPLQKKLENLEQLKEELRKKQEMLDQKRNDFRRKLDKLEKQATGPKGE-ADIEQAAK 665
Query: 526 QHRAELNTSPDKTDSLVKSESTV--ERIMGLGDNDTVNKTSSESGQNQISTSVISNQANF 353
+ + + K + S T E + D + + +T V+ +
Sbjct: 666 RPKVGITADVGKVANPKSSNPTPMEELHAEMTDKNKCVENVVSCSPKTSTTMVLQQSTSL 725
Query: 352 QALPKSAKVAVSCHPGMKVSPNRFKLDNRTTVFRILPPLPDGLLNIDSVKDHFASFGGVN 173
+ L ++ G NR+KLDNR T FRILPPLP G N+ +K+HF+ +G ++
Sbjct: 726 KQLSIRPLGSI----GTPSPVNRYKLDNRPTAFRILPPLPAGFANVAIMKEHFSPYGDLS 781
Query: 172 SVEFEDSKG-ECIDPTTISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQFSWV 14
+ E ED + +C S+ CS +T++TRR+AE+AFL G+CW G L+F W+
Sbjct: 782 NAELEDLESRDCGSELEASKDCSACITFTTRRSAERAFLNGKCWEGHDLKFMWL 835
>gb|EEE60912.1| hypothetical protein OsJ_14616 [Oryza sativa Japonica Group]
Length = 1068
Score = 136 bits (342), Expect = 8e-30
Identities = 94/231 (40%), Positives = 132/231 (57%), Gaps = 2/231 (0%)
Frame = -1
Query: 700 AVPVVQKQESAFDTLKRIREKQEMLARKREEFRKNLEKLAKQ-GTGNKAESADKNMGLKQ 524
++P K++ + + L+ +R+KQE+LA+KR+EFR+ LEKLAKQ G N A+ A+ G K+
Sbjct: 767 SLPPDTKRQESLELLEELRKKQEILAQKRDEFRRQLEKLAKQKGLANSAKQAEA--GGKE 824
Query: 523 HRAELNTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSESGQNQISTSVISNQANFQAL 344
+ N TDS KS +T N+TS E + +S S Q
Sbjct: 825 VAS--NDVHRVTDS--KSMNTGTEGPRDAAGTLQNRTSGELASSSHKSSATSAQ------ 874
Query: 343 PKSAKVAVSCHPGMKVSPNRFKLDNRTTVFRILPPLPDGLLNIDSVKDHFASFGGVNSVE 164
K A P + S NRFKLDNRTT FRILPPLP + + +KDHF SFG ++SV
Sbjct: 875 -KPAVATKQTSPLLVPSQNRFKLDNRTTSFRILPPLPPEIADESVLKDHFMSFGELSSVV 933
Query: 163 FEDSKGECIDPT-TISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQFSWV 14
ED++ D T S +CS VTY+TR++AEKAF+ G+ G +L+F W+
Sbjct: 934 LEDTEAYNHDATLKPSLSCSACVTYTTRQSAEKAFIGGKSCKGHTLRFMWL 984
>sp|Q0JDM0.2|C3H27_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 27;
Short=OsC3H27 gi|215767208|dbj|BAG99436.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 903
Score = 136 bits (342), Expect = 8e-30
Identities = 94/231 (40%), Positives = 132/231 (57%), Gaps = 2/231 (0%)
Frame = -1
Query: 700 AVPVVQKQESAFDTLKRIREKQEMLARKREEFRKNLEKLAKQ-GTGNKAESADKNMGLKQ 524
++P K++ + + L+ +R+KQE+LA+KR+EFR+ LEKLAKQ G N A+ A+ G K+
Sbjct: 602 SLPPDTKRQESLELLEELRKKQEILAQKRDEFRRQLEKLAKQKGLANSAKQAEA--GGKE 659
Query: 523 HRAELNTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSESGQNQISTSVISNQANFQAL 344
+ N TDS KS +T N+TS E + +S S Q
Sbjct: 660 VAS--NDVHRVTDS--KSMNTGTEGPRDAAGTLQNRTSGELASSSHKSSATSAQ------ 709
Query: 343 PKSAKVAVSCHPGMKVSPNRFKLDNRTTVFRILPPLPDGLLNIDSVKDHFASFGGVNSVE 164
K A P + S NRFKLDNRTT FRILPPLP + + +KDHF SFG ++SV
Sbjct: 710 -KPAVATKQTSPLLVPSQNRFKLDNRTTSFRILPPLPPEIADESVLKDHFMSFGELSSVV 768
Query: 163 FEDSKGECIDPT-TISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQFSWV 14
ED++ D T S +CS VTY+TR++AEKAF+ G+ G +L+F W+
Sbjct: 769 LEDTEAYNHDATLKPSLSCSACVTYTTRQSAEKAFIGGKSCKGHTLRFMWL 819
>emb|CAH66461.1| H0718E12.5 [Oryza sativa Indica Group]
Length = 904
Score = 136 bits (342), Expect = 8e-30
Identities = 94/231 (40%), Positives = 132/231 (57%), Gaps = 2/231 (0%)
Frame = -1
Query: 700 AVPVVQKQESAFDTLKRIREKQEMLARKREEFRKNLEKLAKQ-GTGNKAESADKNMGLKQ 524
++P K++ + + L+ +R+KQE+LA+KR+EFR+ LEKLAKQ G N A+ A+ G K+
Sbjct: 603 SLPPDTKRQESLELLEELRKKQEILAQKRDEFRRQLEKLAKQKGLANSAKQAEA--GGKE 660
Query: 523 HRAELNTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSESGQNQISTSVISNQANFQAL 344
+ N TDS KS +T N+TS E + +S S Q
Sbjct: 661 VAS--NDVHRVTDS--KSMNTGTEGPRDAAGTLQNRTSGELASSSHKSSATSAQ------ 710
Query: 343 PKSAKVAVSCHPGMKVSPNRFKLDNRTTVFRILPPLPDGLLNIDSVKDHFASFGGVNSVE 164
K A P + S NRFKLDNRTT FRILPPLP + + +KDHF SFG ++SV
Sbjct: 711 -KPAVATKQTSPLLVPSQNRFKLDNRTTSFRILPPLPPEIADESVLKDHFMSFGELSSVV 769
Query: 163 FEDSKGECIDPT-TISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQFSWV 14
ED++ D T S +CS VTY+TR++AEKAF+ G+ G +L+F W+
Sbjct: 770 LEDTEAYNHDATLKPSLSCSACVTYTTRQSAEKAFIGGKSCKGHTLRFMWL 820
>ref|NP_001052653.1| Os04g0394300 [Oryza sativa Japonica Group]
gi|113564224|dbj|BAF14567.1| Os04g0394300, partial [Oryza
sativa Japonica Group]
Length = 917
Score = 136 bits (342), Expect = 8e-30
Identities = 94/231 (40%), Positives = 132/231 (57%), Gaps = 2/231 (0%)
Frame = -1
Query: 700 AVPVVQKQESAFDTLKRIREKQEMLARKREEFRKNLEKLAKQ-GTGNKAESADKNMGLKQ 524
++P K++ + + L+ +R+KQE+LA+KR+EFR+ LEKLAKQ G N A+ A+ G K+
Sbjct: 616 SLPPDTKRQESLELLEELRKKQEILAQKRDEFRRQLEKLAKQKGLANSAKQAEA--GGKE 673
Query: 523 HRAELNTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSESGQNQISTSVISNQANFQAL 344
+ N TDS KS +T N+TS E + +S S Q
Sbjct: 674 VAS--NDVHRVTDS--KSMNTGTEGPRDAAGTLQNRTSGELASSSHKSSATSAQ------ 723
Query: 343 PKSAKVAVSCHPGMKVSPNRFKLDNRTTVFRILPPLPDGLLNIDSVKDHFASFGGVNSVE 164
K A P + S NRFKLDNRTT FRILPPLP + + +KDHF SFG ++SV
Sbjct: 724 -KPAVATKQTSPLLVPSQNRFKLDNRTTSFRILPPLPPEIADESVLKDHFMSFGELSSVV 782
Query: 163 FEDSKGECIDPT-TISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQFSWV 14
ED++ D T S +CS VTY+TR++AEKAF+ G+ G +L+F W+
Sbjct: 783 LEDTEAYNHDATLKPSLSCSACVTYTTRQSAEKAFIGGKSCKGHTLRFMWL 833
>emb|CAD40551.1| OSJNBa0072K14.6 [Oryza sativa Japonica Group]
Length = 915
Score = 136 bits (342), Expect = 8e-30
Identities = 94/231 (40%), Positives = 132/231 (57%), Gaps = 2/231 (0%)
Frame = -1
Query: 700 AVPVVQKQESAFDTLKRIREKQEMLARKREEFRKNLEKLAKQ-GTGNKAESADKNMGLKQ 524
++P K++ + + L+ +R+KQE+LA+KR+EFR+ LEKLAKQ G N A+ A+ G K+
Sbjct: 614 SLPPDTKRQESLELLEELRKKQEILAQKRDEFRRQLEKLAKQKGLANSAKQAEA--GGKE 671
Query: 523 HRAELNTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSESGQNQISTSVISNQANFQAL 344
+ N TDS KS +T N+TS E + +S S Q
Sbjct: 672 VAS--NDVHRVTDS--KSMNTGTEGPRDAAGTLQNRTSGELASSSHKSSATSAQ------ 721
Query: 343 PKSAKVAVSCHPGMKVSPNRFKLDNRTTVFRILPPLPDGLLNIDSVKDHFASFGGVNSVE 164
K A P + S NRFKLDNRTT FRILPPLP + + +KDHF SFG ++SV
Sbjct: 722 -KPAVATKQTSPLLVPSQNRFKLDNRTTSFRILPPLPPEIADESVLKDHFMSFGELSSVV 780
Query: 163 FEDSKGECIDPT-TISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQFSWV 14
ED++ D T S +CS VTY+TR++AEKAF+ G+ G +L+F W+
Sbjct: 781 LEDTEAYNHDATLKPSLSCSACVTYTTRQSAEKAFIGGKSCKGHTLRFMWL 831
>ref|XP_006652220.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like [Oryza
brachyantha]
Length = 929
Score = 135 bits (339), Expect = 2e-29
Identities = 90/235 (38%), Positives = 131/235 (55%), Gaps = 6/235 (2%)
Frame = -1
Query: 700 AVPVVQKQESAFDTLKRIREKQEMLARKREEFRKNLEKLAKQ-GTGNKAESADKNMGLKQ 524
+VP K++ + + L+ +R+KQE+LA+KR+EFR+ LE+LAKQ G A+ A+ G K+
Sbjct: 607 SVPPDSKRQESLELLEELRKKQEILAQKRDEFRRQLERLAKQKGLATSAKQAEG--GGKE 664
Query: 523 HRAELNTSPDKTDSLVKSESTVERIMGLGDNDTVN----KTSSESGQNQISTSVISNQAN 356
++ ++ D ++E G D +TS E + S S Q
Sbjct: 665 VSNDVQSTTDSKSMNTRTE---------GHQDVAGTLQKRTSGELASSAHKPSATSAQ-- 713
Query: 355 FQALPKSAKVAVSCHPGMKVSPNRFKLDNRTTVFRILPPLPDGLLNIDSVKDHFASFGGV 176
KSA A P + S +RFKLDNRTT FRILPPLP + + +KDHF SFG +
Sbjct: 714 -----KSAVAAKQTSPLLAPSQSRFKLDNRTTSFRILPPLPPEIADESVLKDHFMSFGEL 768
Query: 175 NSVEFEDSKGECIDPT-TISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQFSWV 14
+SV ED++ D T S +CS VTY+TR +AEKAF+ G+ G +L+F W+
Sbjct: 769 SSVVLEDTEAYNNDATLKPSLSCSACVTYTTRSSAEKAFIGGKSCKGHTLRFMWL 823
>ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containing protein 41-like [Vitis
vinifera]
Length = 948
Score = 135 bits (339), Expect = 2e-29
Identities = 93/247 (37%), Positives = 138/247 (55%), Gaps = 12/247 (4%)
Frame = -1
Query: 706 PIAVPVVQKQESAFDTLKR-IREKQEMLARKREEFRKNLEKLAKQGTGNK----AESADK 542
P A P +QK+ + + +K +R+KQEML +KR +FR+ L+KL KQ TG K AE A K
Sbjct: 633 PKAPPPLQKKLESLELMKEELRKKQEMLDQKRNDFRRQLDKLEKQATGLKGEVGAEQAAK 692
Query: 541 N--MGLKQHRAELNTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSESGQNQISTSVIS 368
+G+ A+ T P TD + S I T++K ++S +N + S +
Sbjct: 693 RPKVGIVGDAAKAAT-PRCTDPGIAVGSPQTEI-------TMDK--NKSAENVVPYSSKT 742
Query: 367 NQANFQALPKSAKVAVS--CHPGMKVSPNRFKLDNRTTVFRILPPLPDGLLNIDSVKDHF 194
N A P K +V G NR+KLDNR FRI+ PLP GL N+ +K+HF
Sbjct: 743 NSAMVLLEPTVLKQSVRPLALGGTPSQMNRYKLDNRPMGFRIMAPLPTGLANVGVLKEHF 802
Query: 193 ASFGGVNSVEFEDSKGECID---PTTISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQF 23
+S+G +++VE ED E +D + S CS R+ ++TRR+AE+AF+ G+CW G +L F
Sbjct: 803 SSYGDLSTVELEDL--EALDGGNGSDASRNCSARIIFTTRRSAERAFVNGKCWQGHNLHF 860
Query: 22 SWVALTN 2
W+ +N
Sbjct: 861 MWLISSN 867
>emb|CBI34878.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 135 bits (339), Expect = 2e-29
Identities = 93/247 (37%), Positives = 138/247 (55%), Gaps = 12/247 (4%)
Frame = -1
Query: 706 PIAVPVVQKQESAFDTLKR-IREKQEMLARKREEFRKNLEKLAKQGTGNK----AESADK 542
P A P +QK+ + + +K +R+KQEML +KR +FR+ L+KL KQ TG K AE A K
Sbjct: 445 PKAPPPLQKKLESLELMKEELRKKQEMLDQKRNDFRRQLDKLEKQATGLKGEVGAEQAAK 504
Query: 541 N--MGLKQHRAELNTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSESGQNQISTSVIS 368
+G+ A+ T P TD + S I T++K ++S +N + S +
Sbjct: 505 RPKVGIVGDAAKAAT-PRCTDPGIAVGSPQTEI-------TMDK--NKSAENVVPYSSKT 554
Query: 367 NQANFQALPKSAKVAVS--CHPGMKVSPNRFKLDNRTTVFRILPPLPDGLLNIDSVKDHF 194
N A P K +V G NR+KLDNR FRI+ PLP GL N+ +K+HF
Sbjct: 555 NSAMVLLEPTVLKQSVRPLALGGTPSQMNRYKLDNRPMGFRIMAPLPTGLANVGVLKEHF 614
Query: 193 ASFGGVNSVEFEDSKGECID---PTTISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQF 23
+S+G +++VE ED E +D + S CS R+ ++TRR+AE+AF+ G+CW G +L F
Sbjct: 615 SSYGDLSTVELEDL--EALDGGNGSDASRNCSARIIFTTRRSAERAFVNGKCWQGHNLHF 672
Query: 22 SWVALTN 2
W+ +N
Sbjct: 673 MWLISSN 679
>ref|XP_006341318.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Solanum tuberosum]
Length = 924
Score = 134 bits (338), Expect = 2e-29
Identities = 82/238 (34%), Positives = 123/238 (51%), Gaps = 3/238 (1%)
Frame = -1
Query: 706 PIAVPVVQKQESAFDTLKR-IREKQEMLARKREEFRKNLEKLAKQGTGNKAESADKNMGL 530
P A P +Q + ++ + LK +R+KQE+L +KR EFR+ L KL KQ G KAE+
Sbjct: 606 PKAAPALQTKVASLELLKEELRKKQELLDQKRNEFRRQLNKLEKQAVGVKAEAVSDQDLE 665
Query: 529 KQHRAELNTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSESGQNQISTSVISNQANFQ 350
KQ E + K S + V +D T + IS S + Q
Sbjct: 666 KQKEGETVSDSTKVRSSSMRLNDVSSTQAEAVSDNSRSTENAEHSCPISCSAAATQE--- 722
Query: 349 ALPKSAKVAVS--CHPGMKVSPNRFKLDNRTTVFRILPPLPDGLLNIDSVKDHFASFGGV 176
P S + ++ G NR+KLDNR T F++LPP+P GL N+ +K+HF++FG
Sbjct: 723 --PSSLRQSIPPVAPHGAAFIFNRYKLDNRPTAFKVLPPMPSGLANVTVLKEHFSTFGDP 780
Query: 175 NSVEFEDSKGECIDPTTISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQFSWVALTN 2
+VE ED + + + + S + + TRR+AE+AF G+ W GQ+LQF W+ +N
Sbjct: 781 PAVEMEDLEPQDGNNGSEMSNISASICFPTRRSAERAFSNGKIWQGQALQFMWLQSSN 838
>ref|XP_006338591.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Solanum tuberosum]
Length = 860
Score = 134 bits (338), Expect = 2e-29
Identities = 81/241 (33%), Positives = 129/241 (53%), Gaps = 6/241 (2%)
Frame = -1
Query: 706 PIAVPVVQKQESAFDTLKR-IREKQEMLARKREEFRKNLEKLAKQGTGNKAESADKNMGL 530
P P +QK+ + LK +R+KQEML +KR +FR+ L+KL KQ G K E+
Sbjct: 572 PKTTPALQKKLGTLELLKEEMRKKQEMLEQKRNDFRRKLDKLEKQAVGVKDEAVPDQSVK 631
Query: 529 KQHRAELNTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSESGQNQISTSVISNQANFQ 350
K ++ + +S +E + + T S + + S ++
Sbjct: 632 KPKGGGKGSNSGEVESSSPAEPS-----NAVSSPHAKATPFSSRTTENAEPSCSKSSSLV 686
Query: 349 ALPKSAKVAVSCHP----GMKVSPNRFKLDNRTTVFRILPPLPDGLLNIDSVKDHFASFG 182
A +++ + S P G NR+KLDNR T F+ILPPLP GL N+D +K+HF++FG
Sbjct: 687 AAKEASNLKQSIRPLAPVGAPFILNRYKLDNRPTTFKILPPLPSGLANVDVLKEHFSTFG 746
Query: 181 GVNSVEFED-SKGECIDPTTISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQFSWVALT 5
+ SVE ED +C + + + T S R+++ +RR+AE+A+L G+CW Q+L F W+ +
Sbjct: 747 DLLSVELEDLEPQDCNNGSEVLNT-SARISFRSRRSAERAYLNGKCWQDQTLHFMWLQSS 805
Query: 4 N 2
N
Sbjct: 806 N 806
>ref|XP_002300018.2| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|550348869|gb|EEE84823.2| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 981
Score = 132 bits (333), Expect = 8e-29
Identities = 83/249 (33%), Positives = 132/249 (53%), Gaps = 19/249 (7%)
Frame = -1
Query: 703 IAVPVVQKQESAFDTLKRIREKQEMLARKREEFRKNLEKLAKQGTGNKAESADKNMGLKQ 524
++ P+ +K E+ + +R+KQE+L +KR +FR+ L KL KQ TG K E A + +Q
Sbjct: 624 VSPPMQKKLENLEQLKEELRKKQELLDQKRNDFRRQLHKLEKQATGVKGEVATEPASKRQ 683
Query: 523 HRAELNTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSESGQNQISTSVISNQANFQAL 344
+ + K+ +T G G ++ + + S + + AL
Sbjct: 684 KTGIAS-------DVAKAATTRSADPGAGVASPHGGIVDKNKRMENIVSSSTKTSTVMAL 736
Query: 343 PKSAKVAVSCHPGMKVSP----NRFKLDNRTTVFRILPPLPDGLLN----------IDSV 206
+SA S HP V P N++KLDNR T F+I+ PLP GL N +
Sbjct: 737 QESAGSKQSIHPLAPVGPPFLMNKYKLDNRPTAFKIISPLPAGLANSCHDKMLKVPCGNN 796
Query: 205 KDHFASFGGVNSVEFEDSKGECI-----DPTTISETCSLRVTYSTRRAAEKAFLEGRCWN 41
++HF+S+G ++SVE ED G+ D + ++CS RVT++TRR+AE+AFL G+CW
Sbjct: 797 REHFSSYGYLSSVELEDEPGDYDGDGNGDGSDTVKSCSARVTFATRRSAERAFLNGKCWQ 856
Query: 40 GQSLQFSWV 14
G++L+F W+
Sbjct: 857 GKNLKFEWL 865
>ref|XP_004252213.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Solanum lycopersicum]
Length = 877
Score = 132 bits (333), Expect = 8e-29
Identities = 83/238 (34%), Positives = 123/238 (51%), Gaps = 3/238 (1%)
Frame = -1
Query: 706 PIAVPVVQKQESAFDTLK-RIREKQEMLARKREEFRKNLEKLAKQGTGNKAESADKNMGL 530
P A P +QK+ ++ + LK +R+KQE+L +KR EFR+ L KL KQ G KAE+
Sbjct: 608 PKAAPALQKKVASLELLKVELRKKQELLDQKRSEFRRQLNKLEKQAVGVKAEAISDQDLE 667
Query: 529 KQHRAELNTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSESGQNQISTSVISNQANFQ 350
KQ E + K S + V +D T + IS S + Q
Sbjct: 668 KQKEGETVSDSTKVRSSSMRLNDVSSTQAEVVSDNNRSTENAEHSCPISCSAAATQE--- 724
Query: 349 ALPKSAKVAVS--CHPGMKVSPNRFKLDNRTTVFRILPPLPDGLLNIDSVKDHFASFGGV 176
P S + ++ G NR+KLDNR T F++LPP+P GL N+ +K+HF++FG
Sbjct: 725 --PSSLRQSIPPVAPHGAPFVFNRYKLDNRPTAFKVLPPMPSGLANVTVLKEHFSTFGDP 782
Query: 175 NSVEFEDSKGECIDPTTISETCSLRVTYSTRRAAEKAFLEGRCWNGQSLQFSWVALTN 2
+VE ED + + + + S + + TRR+AE+AF G+ W GQ+LQF W +N
Sbjct: 783 PAVEMEDLEPQDGNNGSEMLNISASICFPTRRSAERAFSNGKIWQGQALQFMWSQSSN 840
>ref|XP_001785787.1| predicted protein [Physcomitrella patens] gi|162662557|gb|EDQ49394.1|
predicted protein [Physcomitrella patens]
Length = 1157
Score = 132 bits (332), Expect = 1e-28
Identities = 91/262 (34%), Positives = 141/262 (53%), Gaps = 28/262 (10%)
Frame = -1
Query: 712 SRPIAVPVVQKQESAFDTLK-RIREKQEMLARKREEFRKNLEKLAKQGTGNKAESADKNM 536
S P V V K++ + ++ +IR+KQE LA+KR++FR+ L KLA QG AE +
Sbjct: 836 SVPSPVAVASKKQEELELMREKIRQKQEALAQKRDDFRRKLNKLASQGVTG-AEDYQGDH 894
Query: 535 GLKQHRAEL--NTSPDKTDSLVKSESTVERIMGLGDNDTVNKTSSESGQNQISTSVISNQ 362
K+ +A+ + P K D+ V+S + GL + V+ T Q+ S +S++
Sbjct: 895 ARKRQKADNFGDLRPCKVDAAVRS---LPSNFGLKKINAVDVT-------QVGASQVSSK 944
Query: 361 ANFQALPKSAKVAVSCHPGMKVSPNRFKLDNRTTVFRILPPLP-----------DGL--- 224
P++A + H + P RFKLDNRTT FR+LPP P GL
Sbjct: 945 PTRSPHPRTASGTSTGHSAVAWGPARFKLDNRTTAFRVLPPFPFTVSDARKRVWPGLSIS 1004
Query: 223 ----------LNIDSVKDHFASFGGVNSVEFEDSKGECIDPT-TISETCSLRVTYSTRRA 77
+ + +V+DHFA+FG ++SVE E ++G D T S S+R++Y+TR +
Sbjct: 1005 SLFSRVYFAFVEVAAVRDHFAAFGELSSVEVEAAEGHKADSEHTWSPNSSIRISYTTRWS 1064
Query: 76 AEKAFLEGRCWNGQSLQFSWVA 11
AE+A ++GRC++GQSL WV+
Sbjct: 1065 AERAMMQGRCFHGQSLNLVWVS 1086