BLASTX nr result

ID: Ephedra28_contig00018542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00018542
         (481 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                              67   2e-09

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 14/161 (8%)
 Frame = -3

Query: 443 SLYIFIDNALKDKDIEDLLPIETLSKAPLKIRILMTTRDSN--------QIPGFQRFEKK 288
           S +I+IDNAL ++++  LLP E LSKA  K+R+L+T RD N          P   R  K 
Sbjct: 405 SAFIYIDNALGERELGQLLP-EDLSKAK-KVRLLITARDLNVRKSCPLKTAPKEYRM-KA 461

Query: 287 IYPIRENSAAKEILCYHAEEDLPSDFAQMKEVDEVLKMCGGIPLIIKLAGRQLAKHENKA 108
           I  +   +  K  +  H E  L S      +V+ ++K CGGIPL++KL  R L   ++K 
Sbjct: 462 ISSMEATNLLKMEMFGHMETILYS-----YQVNHIIKKCGGIPLMLKLVARALRFAKDKE 516

Query: 107 KICREM----KLSALQVDKERIVD--FVYERLSDDSKEAFL 3
           ++ + +    KL      +++I    F Y++L +D K+ FL
Sbjct: 517 EVDQVLDELEKLKGEDFGRDKIESYLFAYDKLPEDCKDPFL 557


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