BLASTX nr result

ID: Ephedra28_contig00018349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00018349
         (1042 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006852749.1| hypothetical protein AMTR_s00033p00114960 [A...    67   1e-08

>ref|XP_006852749.1| hypothetical protein AMTR_s00033p00114960 [Amborella trichopoda]
           gi|548856363|gb|ERN14216.1| hypothetical protein
           AMTR_s00033p00114960 [Amborella trichopoda]
          Length = 557

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 64/238 (26%), Positives = 95/238 (39%), Gaps = 3/238 (1%)
 Frame = +1

Query: 16  NPTSQEDHEKLQVQPLMTNGSDSD-HDKVKARLSSDFPSSIMCQNHVFTNDADNLHQYGT 192
           +P +Q++ E+ ++  ++TNG   + +   K   S DF + +  QN V      N      
Sbjct: 348 SPIAQQESEQ-KIPMILTNGGGFELNGSNKPIPSLDFQNMVSYQNQVNQETVGN------ 400

Query: 193 ITQLSGFGTLERKDN-GTENDADKKPLAVAAVGSTQNLSNFMDSRNSESVEEGXXXXXXX 369
             Q+S F T    +  G  N  ++K L             FM  +  +  E         
Sbjct: 401 --QISAFVTKPTSEMPGKRNTDEQKSLF------------FMPGQVVKGAESSDHASMSF 446

Query: 370 XXXXXXXXXXXXXXXXXDGMRNMMLDNRVHPSFYEHGQGHSMRPDLMKGGKILSGWGYVS 549
                            +     ++D R H  FY+HG        L +G K+LSGW  V 
Sbjct: 447 RGVGNGVHGWPQAMMQSENCARNIMDMRSH-LFYDHGNA------LRQGNKVLSGWSCVG 499

Query: 550 SEDHDDVVPSGKXXXXXXXXXXXXST-VGEVRRPKVDGVMRLDSVPGIPKGLVQINRW 720
            ED DD   S K            S+ V E+ +PKV+G + LDS   I KGL Q+NRW
Sbjct: 500 EEDQDDAEQSRKEDGDDEEMEDDSSSAVDEMSKPKVEGSLGLDSRAQIAKGLTQLNRW 557


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