BLASTX nr result

ID: Ephedra28_contig00018096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00018096
         (565 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006383860.1| hypothetical protein POPTR_0004s00660g [Popu...    56   7e-06
ref|XP_006383859.1| ribosomal protein L4 [Populus trichocarpa] g...    56   7e-06
ref|XP_006383858.1| hypothetical protein POPTR_0004s00660g [Popu...    56   7e-06
ref|XP_002331557.1| predicted protein [Populus trichocarpa]            56   7e-06

>ref|XP_006383860.1| hypothetical protein POPTR_0004s00660g [Populus trichocarpa]
           gi|550340007|gb|ERP61657.1| hypothetical protein
           POPTR_0004s00660g [Populus trichocarpa]
          Length = 317

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 25/51 (49%), Positives = 37/51 (72%)
 Frame = -2

Query: 564 KFAISIGNIPGIDALPRIGMNVYDIVKHDVLIMSVDAVDNLVEWLRTPIKR 412
           K  ++  N+  ++ LP IG+NVY I++HD L+MS DAV+ +VE + TPIKR
Sbjct: 267 KLKLATQNLHYVNLLPSIGLNVYSILQHDTLVMSRDAVNKIVERMHTPIKR 317


>ref|XP_006383859.1| ribosomal protein L4 [Populus trichocarpa]
           gi|550340006|gb|ERP61656.1| ribosomal protein L4
           [Populus trichocarpa]
          Length = 285

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 25/51 (49%), Positives = 37/51 (72%)
 Frame = -2

Query: 564 KFAISIGNIPGIDALPRIGMNVYDIVKHDVLIMSVDAVDNLVEWLRTPIKR 412
           K  ++  N+  ++ LP IG+NVY I++HD L+MS DAV+ +VE + TPIKR
Sbjct: 235 KLKLATQNLHYVNLLPSIGLNVYSILQHDTLVMSRDAVNKIVERMHTPIKR 285


>ref|XP_006383858.1| hypothetical protein POPTR_0004s00660g [Populus trichocarpa]
           gi|550340005|gb|ERP61655.1| hypothetical protein
           POPTR_0004s00660g [Populus trichocarpa]
          Length = 277

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 25/51 (49%), Positives = 37/51 (72%)
 Frame = -2

Query: 564 KFAISIGNIPGIDALPRIGMNVYDIVKHDVLIMSVDAVDNLVEWLRTPIKR 412
           K  ++  N+  ++ LP IG+NVY I++HD L+MS DAV+ +VE + TPIKR
Sbjct: 227 KLKLATQNLHYVNLLPSIGLNVYSILQHDTLVMSRDAVNKIVERMHTPIKR 277


>ref|XP_002331557.1| predicted protein [Populus trichocarpa]
          Length = 285

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 25/51 (49%), Positives = 37/51 (72%)
 Frame = -2

Query: 564 KFAISIGNIPGIDALPRIGMNVYDIVKHDVLIMSVDAVDNLVEWLRTPIKR 412
           K  ++  N+  ++ LP IG+NVY I++HD L+MS DAV+ +VE + TPIKR
Sbjct: 235 KLKLATQNLHYVNLLPSIGLNVYSILQHDTLVMSRDAVNKIVERMHTPIKR 285


Top