BLASTX nr result

ID: Ephedra28_contig00018080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00018080
         (463 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002965985.1| hypothetical protein SELMODRAFT_407186 [Sela...    59   5e-07
ref|XP_002989242.1| hypothetical protein SELMODRAFT_3509 [Selagi...    59   7e-07
ref|XP_002438029.1| hypothetical protein SORBIDRAFT_10g006890 [S...    57   2e-06
gb|AFW76687.1| putative PHD-finger domain containing protein fam...    55   1e-05
gb|AFW76686.1| putative PHD-finger domain containing protein fam...    55   1e-05
gb|AFW76685.1| putative PHD-finger domain containing protein fam...    55   1e-05
gb|ACN36771.1| unknown [Zea mays]                                      55   1e-05

>ref|XP_002965985.1| hypothetical protein SELMODRAFT_407186 [Selaginella moellendorffii]
           gi|300166799|gb|EFJ33405.1| hypothetical protein
           SELMODRAFT_407186 [Selaginella moellendorffii]
          Length = 1285

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 26/49 (53%), Positives = 33/49 (67%)
 Frame = +2

Query: 2   CSHGSCTTAFHPLCAKEMNLWMGISSVEGRDDVGLCALCSTHSAVHPSR 148
           CSHG C TAFHPLCA++  L M +SS E  D+V L A C  HSA+  ++
Sbjct: 356 CSHGLCATAFHPLCARDAKLLMEVSSREDTDEVDLRAYCPKHSAIRVAK 404


>ref|XP_002989242.1| hypothetical protein SELMODRAFT_3509 [Selaginella moellendorffii]
           gi|300142985|gb|EFJ09680.1| hypothetical protein
           SELMODRAFT_3509 [Selaginella moellendorffii]
          Length = 195

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = +2

Query: 2   CSHGSCTTAFHPLCAKEMNLWMGISSVEGRDDVGLCALCSTHSAV 136
           CSHG C TAFHPLCA++  L M +SS E  D+V L A C  HSA+
Sbjct: 150 CSHGLCATAFHPLCARDAKLLMEVSSREDTDEVDLRAYCPKHSAI 194


>ref|XP_002438029.1| hypothetical protein SORBIDRAFT_10g006890 [Sorghum bicolor]
           gi|241916252|gb|EER89396.1| hypothetical protein
           SORBIDRAFT_10g006890 [Sorghum bicolor]
          Length = 514

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
 Frame = +2

Query: 2   CSHGSCTTAFHPLCAKEMNLWMGISSVEGRDDVGLCALCSTHSAVHPSRLSASVSGLTKD 181
           CSHG+C T+FHP+CA+E  L + I    G D+V + A C+ HSA+       S+S +  D
Sbjct: 35  CSHGACRTSFHPICAREFKLQIEIWGKFGHDNVEMRAFCAKHSAI------KSISSIQND 88

Query: 182 P--KELITSQQEPRHSNEDAG 238
               EL  +Q EP       G
Sbjct: 89  KSVSELDCAQAEPHDGKPVTG 109


>gb|AFW76687.1| putative PHD-finger domain containing protein family [Zea mays]
          Length = 1108

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +2

Query: 2   CSHGSCTTAFHPLCAKEMNLWMGISSVEGRDDVGLCALCSTHSAVHPSRLSASVSGLTKD 181
           CSHG+C T+FHP+CA+E  L + I    G D+V + A C+ HS+V       S+S +  D
Sbjct: 160 CSHGACRTSFHPICAREFKLQIEIWGKFGHDNVEMRAFCAKHSSV------KSISSIQND 213

Query: 182 P--KELITSQQEPRHSNEDAGK 241
               EL ++Q E        GK
Sbjct: 214 KSVSELDSAQVELHDGKPVTGK 235


>gb|AFW76686.1| putative PHD-finger domain containing protein family [Zea mays]
          Length = 1088

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +2

Query: 2   CSHGSCTTAFHPLCAKEMNLWMGISSVEGRDDVGLCALCSTHSAVHPSRLSASVSGLTKD 181
           CSHG+C T+FHP+CA+E  L + I    G D+V + A C+ HS+V       S+S +  D
Sbjct: 160 CSHGACRTSFHPICAREFKLQIEIWGKFGHDNVEMRAFCAKHSSV------KSISSIQND 213

Query: 182 P--KELITSQQEPRHSNEDAGK 241
               EL ++Q E        GK
Sbjct: 214 KSVSELDSAQVELHDGKPVTGK 235


>gb|AFW76685.1| putative PHD-finger domain containing protein family [Zea mays]
          Length = 637

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +2

Query: 2   CSHGSCTTAFHPLCAKEMNLWMGISSVEGRDDVGLCALCSTHSAVHPSRLSASVSGLTKD 181
           CSHG+C T+FHP+CA+E  L + I    G D+V + A C+ HS+V       S+S +  D
Sbjct: 232 CSHGACRTSFHPICAREFKLQIEIWGKFGHDNVEMRAFCAKHSSV------KSISSIQND 285

Query: 182 P--KELITSQQEPRHSNEDAGK 241
               EL ++Q E        GK
Sbjct: 286 KSVSELDSAQVELHDGKPVTGK 307


>gb|ACN36771.1| unknown [Zea mays]
          Length = 432

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +2

Query: 2   CSHGSCTTAFHPLCAKEMNLWMGISSVEGRDDVGLCALCSTHSAVHPSRLSASVSGLTKD 181
           CSHG+C T+FHP+CA+E  L + I    G D+V + A C+ HS+V       S+S +  D
Sbjct: 355 CSHGACRTSFHPICAREFKLQIEIWGKFGHDNVEMRAFCAKHSSV------KSISSIQND 408

Query: 182 P--KELITSQQEPRHSNEDAGK 241
               EL ++Q E        GK
Sbjct: 409 KSVSELDSAQVELHDGKPVTGK 430


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