BLASTX nr result
ID: Ephedra28_contig00017996
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00017996
(729 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR18382.1| unknown [Picea sitchensis] 264 2e-68
ref|XP_006855276.1| hypothetical protein AMTR_s00057p00025150 [A... 225 1e-56
ref|XP_003579309.1| PREDICTED: RNA pseudourine synthase 1-like [... 219 9e-55
gb|AAG50905.1|AC069159_6 RNA pseudouridylate synthase, putative ... 217 4e-54
gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana] 217 4e-54
ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thalian... 217 4e-54
gb|EMJ06787.1| hypothetical protein PRUPE_ppa008866mg [Prunus pe... 216 6e-54
ref|NP_001067018.1| Os12g0560500 [Oryza sativa Japonica Group] g... 216 6e-54
gb|EEE53427.1| hypothetical protein OsJ_36505 [Oryza sativa Japo... 216 6e-54
ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [... 214 2e-53
ref|XP_002318955.1| predicted protein [Populus trichocarpa] 214 2e-53
ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like... 214 3e-53
ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like... 213 4e-53
ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citr... 212 9e-53
ref|XP_006664100.1| PREDICTED: RNA pseudouridine synthase 1-like... 211 2e-52
gb|EMS63083.1| RNA pseudourine synthase 1 [Triticum urartu] 211 2e-52
gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis] 211 3e-52
ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutr... 211 3e-52
ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [... 210 3e-52
tpg|DAA55260.1| TPA: hypothetical protein ZEAMMB73_192305 [Zea m... 210 4e-52
>gb|ABR18382.1| unknown [Picea sitchensis]
Length = 358
Score = 264 bits (675), Expect = 2e-68
Identities = 130/240 (54%), Positives = 168/240 (70%), Gaps = 6/240 (2%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SGVM+ITK HKIA + VKA+T+R++ KTYLALCI P+P WN+IYIESGHGRSK+GAWR Y
Sbjct: 122 SGVMVITKLHKIAGQLVKAFTDRKVRKTYLALCIGPAPKWNNIYIESGHGRSKFGAWRVY 181
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNP-- 354
S+ DVG++LPGG+ VR+M+T L VL++N + D++ + Q I A LK
Sbjct: 182 SRTDVGRILPGGTVVREMATHLKVLAVNANHRMHRDSVDKAQNSSQGI---AFDLKEDRF 238
Query: 355 ----DKITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLH 522
D + D + +VV TEQ G +S P+ KND VL+RA PL+GRTHQIRLH
Sbjct: 239 ATVGDNGSTDSIEKVVVTEQNSKAPGQDRDIVSSPNIRKNDEVLIRASPLSGRTHQIRLH 298
Query: 523 CQYARLPIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWALKSF 702
CQY LPIRGD KY G WK T+ +HALHAE++CFEHPVT N+VK APLP+W ++++
Sbjct: 299 CQYMGLPIRGDVKYEGPHIWKGITYANHALHAESLCFEHPVTNNMVKFHAPLPQWVMEAY 358
>ref|XP_006855276.1| hypothetical protein AMTR_s00057p00025150 [Amborella trichopoda]
gi|548859042|gb|ERN16743.1| hypothetical protein
AMTR_s00057p00025150 [Amborella trichopoda]
Length = 326
Score = 225 bits (573), Expect = 1e-56
Identities = 112/239 (46%), Positives = 150/239 (62%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SGVM+ITK HK+A K V+A+TE R+ KTY+ALCI +P W I ++SGHGRSK+GAWR Y
Sbjct: 121 SGVMLITKLHKVAGKLVQAFTEHRVKKTYIALCIGLAPQWEEIALKSGHGRSKFGAWRVY 180
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
S +D+G+ LPGGS VR+M T VLS+NG L S N+ +N
Sbjct: 181 SASDIGRTLPGGSVVREMVTSFKVLSVNG---------------LSSENIDFIEKRNEML 225
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARL 540
I D +++ +T + D +L+RAYP +GRTHQIRLHCQY +
Sbjct: 226 IVRDEGSKISSTH------------------DAKDEILIRAYPQSGRTHQIRLHCQYLGI 267
Query: 541 PIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWALKSFNCTVG 717
P+RGD KY G WK+ T++ HALHAE + F+HPVTG+L++ APLP WA ++ +CT G
Sbjct: 268 PLRGDVKYEGPHEWKEKTYDYHALHAENLSFDHPVTGSLMEFHAPLPSWAREALSCTKG 326
>ref|XP_003579309.1| PREDICTED: RNA pseudourine synthase 1-like [Brachypodium
distachyon]
Length = 308
Score = 219 bits (557), Expect = 9e-55
Identities = 112/230 (48%), Positives = 141/230 (61%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SG+M+ITK +K+AAK VKA+TE ++ KTYLALCI PTW I I SGHGRSK+GAWR Y
Sbjct: 101 SGLMVITKCNKVAAKLVKAFTEHKVKKTYLALCIGYPPTWEKIRICSGHGRSKHGAWRVY 160
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
+ +DVG+ LPGGS+VRDMST VL ING + P
Sbjct: 161 AMSDVGRTLPGGSSVRDMSTKFEVLGING----------------------KGQFREPSN 198
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARL 540
+ +D + + E + + S D KN ++L+RAYP +GRTHQIRLHCQY
Sbjct: 199 VNIDDIESITVQE--------KAADHSSTDDLKNHMILVRAYPQSGRTHQIRLHCQYLGF 250
Query: 541 PIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWA 690
PIRGD KYGGV+ W + HALH+E++ F HPVTG + RAPLP WA
Sbjct: 251 PIRGDVKYGGVIEWNGVDCDGHALHSESLSFVHPVTGLPITFRAPLPSWA 300
>gb|AAG50905.1|AC069159_6 RNA pseudouridylate synthase, putative [Arabidopsis thaliana]
Length = 254
Score = 217 bits (552), Expect = 4e-54
Identities = 111/230 (48%), Positives = 143/230 (62%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SGVMIITK HK+AAK VKA+TE +I K+Y+ALCI SP W + + SGHGRSK+GAWR Y
Sbjct: 56 SGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVY 115
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
+ DVG+VLPGGS VRDM T V+S+N ++KN +
Sbjct: 116 AALDVGRVLPGGSFVRDMETTFEVVSVN-------------------------SVKN-ES 149
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARL 540
L+ +N V+ E +S D+ + +V++RA+P +GRTHQIRLHCQY +
Sbjct: 150 CELEDVNHVIVAE--------GERELSCGGDDDDVVVVVRAFPRSGRTHQIRLHCQYLGI 201
Query: 541 PIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWA 690
PIRGD KY GV W TFE H LHAE + +HPVTG+ + +RAPLP WA
Sbjct: 202 PIRGDVKYHGVYEWNGRTFEGHELHAECLSLDHPVTGDSIVIRAPLPYWA 251
>gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana]
Length = 293
Score = 217 bits (552), Expect = 4e-54
Identities = 111/230 (48%), Positives = 143/230 (62%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SGVMIITK HK+AAK VKA+TE +I K+Y+ALCI SP W + + SGHGRSK+GAWR Y
Sbjct: 95 SGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVY 154
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
+ DVG+VLPGGS VRDM T V+S+N ++KN +
Sbjct: 155 AALDVGRVLPGGSFVRDMETTFEVVSVN-------------------------SVKN-ES 188
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARL 540
L+ +N V+ E +S D+ + +V++RA+P +GRTHQIRLHCQY +
Sbjct: 189 CELEDVNHVIVAE--------GERELSCGGDDDDVVVVVRAFPRSGRTHQIRLHCQYLGI 240
Query: 541 PIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWA 690
PIRGD KY GV W TFE H LHAE + +HPVTG+ + +RAPLP WA
Sbjct: 241 PIRGDVKYHGVYEWNGRTFEGHELHAECLSLDHPVTGDSIVIRAPLPYWA 290
>ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thaliana]
gi|75140931|sp|Q7XA65.1|PUS1_ARATH RecName: Full=RNA
pseudouridine synthase 1; AltName: Full=RNA
pseudouridylate synthase 1; AltName: Full=RNA-uridine
isomerase 1 gi|33589806|gb|AAQ22669.1| At1g56345
[Arabidopsis thaliana] gi|110736414|dbj|BAF00174.1|
hypothetical protein [Arabidopsis thaliana]
gi|332195260|gb|AEE33381.1| RNA pseudourine synthase 1
[Arabidopsis thaliana]
Length = 322
Score = 217 bits (552), Expect = 4e-54
Identities = 111/230 (48%), Positives = 143/230 (62%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SGVMIITK HK+AAK VKA+TE +I K+Y+ALCI SP W + + SGHGRSK+GAWR Y
Sbjct: 124 SGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVY 183
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
+ DVG+VLPGGS VRDM T V+S+N ++KN +
Sbjct: 184 AALDVGRVLPGGSFVRDMETTFEVVSVN-------------------------SVKN-ES 217
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARL 540
L+ +N V+ E +S D+ + +V++RA+P +GRTHQIRLHCQY +
Sbjct: 218 CELEDVNHVIVAE--------GERELSCGGDDDDVVVVVRAFPRSGRTHQIRLHCQYLGI 269
Query: 541 PIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWA 690
PIRGD KY GV W TFE H LHAE + +HPVTG+ + +RAPLP WA
Sbjct: 270 PIRGDVKYHGVYEWNGRTFEGHELHAECLSLDHPVTGDSIVIRAPLPYWA 319
>gb|EMJ06787.1| hypothetical protein PRUPE_ppa008866mg [Prunus persica]
Length = 316
Score = 216 bits (550), Expect = 6e-54
Identities = 109/230 (47%), Positives = 140/230 (60%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SG+M+ITK HK+A+K VKA+T+ +I KTY+A CI +P W I ++SGHGRSK+GAWR Y
Sbjct: 114 SGLMVITKSHKVASKLVKAFTDHKISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVY 173
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
+ +DVG+ LPGGS VRDM T VLSING +LK P +
Sbjct: 174 AASDVGRTLPGGSMVRDMETSFEVLSING----------------------QGSLKEPSE 211
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARL 540
D N +V E+ + D K D +L+RA P +GRTHQIRLHCQY +
Sbjct: 212 FKKDEANTIVVQEK-----------AVIDKDTKKDEILVRARPRSGRTHQIRLHCQYLGI 260
Query: 541 PIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWA 690
IRGD KY GV WK T++ H LHAE++ FEHP+TG V +AP+P WA
Sbjct: 261 SIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPITGLPVMFQAPVPSWA 310
>ref|NP_001067018.1| Os12g0560500 [Oryza sativa Japonica Group]
gi|122203511|sp|Q2QNM3.1|PUS1_ORYSJ RecName: Full=RNA
pseudouridine synthase 1; AltName: Full=RNA
pseudouridylate synthase 1; AltName: Full=RNA-uridine
isomerase 1 gi|77556134|gb|ABA98930.1| RNA
pseudouridylate synthase, putative, expressed [Oryza
sativa Japonica Group] gi|113649525|dbj|BAF30037.1|
Os12g0560500 [Oryza sativa Japonica Group]
gi|125537021|gb|EAY83509.1| hypothetical protein
OsI_38723 [Oryza sativa Indica Group]
gi|215692563|dbj|BAG87983.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 345
Score = 216 bits (550), Expect = 6e-54
Identities = 111/230 (48%), Positives = 138/230 (60%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SG+M+ITK +K+A K VKA+TE ++ KTYLALCI P W I I SGHGRSK+GAWR Y
Sbjct: 138 SGLMVITKCNKVAGKLVKAFTEHKVKKTYLALCIGYPPAWEKIKICSGHGRSKHGAWRVY 197
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
+ +DVG+ LPGGS VRDMST VL ING + + P
Sbjct: 198 AMSDVGRSLPGGSVVRDMSTRFEVLGINGKGQ----------------------FREPSN 235
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARL 540
+D + E+ ++ DEKN I+L+RAYP +GRTHQIRLHCQY
Sbjct: 236 FEVDETESITVQEKAAD--------LTSDGDEKNSIILVRAYPQSGRTHQIRLHCQYLGF 287
Query: 541 PIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWA 690
PIRGD KY GV+ W ++ HALHAE++ F HPVTG V R+PLP WA
Sbjct: 288 PIRGDVKYSGVIEWNGVDYDGHALHAESLSFVHPVTGLPVTFRSPLPSWA 337
>gb|EEE53427.1| hypothetical protein OsJ_36505 [Oryza sativa Japonica Group]
Length = 423
Score = 216 bits (550), Expect = 6e-54
Identities = 111/230 (48%), Positives = 138/230 (60%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SG+M+ITK +K+A K VKA+TE ++ KTYLALCI P W I I SGHGRSK+GAWR Y
Sbjct: 216 SGLMVITKCNKVAGKLVKAFTEHKVKKTYLALCIGYPPAWEKIKICSGHGRSKHGAWRVY 275
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
+ +DVG+ LPGGS VRDMST VL ING + + P
Sbjct: 276 AMSDVGRSLPGGSVVRDMSTRFEVLGINGKGQ----------------------FREPSN 313
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARL 540
+D + E+ ++ DEKN I+L+RAYP +GRTHQIRLHCQY
Sbjct: 314 FEVDETESITVQEKAAD--------LTSDGDEKNSIILVRAYPQSGRTHQIRLHCQYLGF 365
Query: 541 PIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWA 690
PIRGD KY GV+ W ++ HALHAE++ F HPVTG V R+PLP WA
Sbjct: 366 PIRGDVKYSGVIEWNGVDYDGHALHAESLSFVHPVTGLPVTFRSPLPSWA 415
>ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [Solanum lycopersicum]
Length = 308
Score = 214 bits (546), Expect = 2e-53
Identities = 110/234 (47%), Positives = 143/234 (61%), Gaps = 2/234 (0%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SGVM+ITK HK+AAKFVKA+T+ ++ KTYLA C+ +P W I ++SGHGRSKYGAWR Y
Sbjct: 104 SGVMLITKLHKVAAKFVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVY 163
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFP--KTTTDAIHDSDTFLQSINLTATTLKNP 354
+ +D G+ LPGGS V+DM T VLS+NG K +D D D
Sbjct: 164 AASDAGRKLPGGSLVKDMETSFEVLSVNGLGCFKEVSDLHKDEDI--------------- 208
Query: 355 DKITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYA 534
V+ E+ G D K D +L+RA P +GRTHQIRLHCQY
Sbjct: 209 ----------VIVQEKSVIG-----------CDLKKDEILVRASPRSGRTHQIRLHCQYL 247
Query: 535 RLPIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWALK 696
+PIRGD +Y GV WK + ++SH LHAE++ FEHP+TG + L+APLP WA++
Sbjct: 248 GIPIRGDVRYEGVYEWKGNIYDSHELHAESLSFEHPITGKSMLLQAPLPSWAIQ 301
>ref|XP_002318955.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 214 bits (545), Expect = 2e-53
Identities = 111/235 (47%), Positives = 146/235 (62%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SGVM+ITK HK+A+K VKA+T+ ++ KTY+ALCI +P W I I+SGHGRSK+GA+R Y
Sbjct: 56 SGVMVITKLHKVASKLVKAFTDHKVRKTYIALCIGSAPKWEKITIKSGHGRSKFGAFRVY 115
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
+ +DVG+ LPGGSTV+DM T VLSING + + P +
Sbjct: 116 AASDVGRSLPGGSTVKDMETSFEVLSING----------------------QGSFREPSE 153
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARL 540
D N +V E+ + +D K D +L+RA+P +GRTHQIRLHCQY +
Sbjct: 154 FNSD-KNILVVEEK-----------AVIDTDAKKDEILVRAFPRSGRTHQIRLHCQYLGI 201
Query: 541 PIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWALKSFN 705
PIRGD KY GV WK T++ H LHAE++ EHPVTG + RAPLP WA + F+
Sbjct: 202 PIRGDVKYEGVCEWKGRTYDGHELHAESLSLEHPVTGQPLMFRAPLPVWATRWFS 256
>ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like [Solanum tuberosum]
Length = 332
Score = 214 bits (544), Expect = 3e-53
Identities = 110/234 (47%), Positives = 142/234 (60%), Gaps = 2/234 (0%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SGVM+ITK HK+AAKFVKA+T+ ++ KTYLA C+ +P W I ++SGHGRSKYGAWR Y
Sbjct: 134 SGVMLITKLHKVAAKFVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVY 193
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFP--KTTTDAIHDSDTFLQSINLTATTLKNP 354
+ +D G+ LPGGS V+DM T VLS+NG K +D D D
Sbjct: 194 AASDAGRKLPGGSLVKDMETSFEVLSVNGLGCFKEVSDFHKDEDV--------------- 238
Query: 355 DKITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYA 534
V+ E+ G D K D +L+RA P +GRTHQIRLHCQY
Sbjct: 239 ----------VIVQEKSVIG-----------CDLKKDEILVRASPRSGRTHQIRLHCQYL 277
Query: 535 RLPIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWALK 696
+PIRGD +Y GV WK ++SH LHAE++ FEHP+TG + L+APLP WA++
Sbjct: 278 GIPIRGDVRYEGVYEWKGSRYDSHELHAESLSFEHPITGKPMLLQAPLPSWAIQ 331
>ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like [Citrus sinensis]
Length = 324
Score = 213 bits (543), Expect = 4e-53
Identities = 106/233 (45%), Positives = 143/233 (61%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SGVM+ITK HK+A+K VKA+T+ ++ KTY+ALCI P+P W I I SGHGRSK+GAWR Y
Sbjct: 119 SGVMVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVY 178
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
+ +DVG+VLPGGS VRDM T VLS+NG + K P +
Sbjct: 179 AASDVGRVLPGGSVVRDMVTSFEVLSVNG----------------------EGSFKEPSE 216
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARL 540
+ D N +V ++ + +D K + +L+R +P +GRTHQIRLHCQY +
Sbjct: 217 LQEDEENNIVVEKK-----------AVLDADAKKNEILVRVFPRSGRTHQIRLHCQYLGI 265
Query: 541 PIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWALKS 699
IRGD KY GV W ++ H LHAE++ EHP+TG V ++APLP WA ++
Sbjct: 266 SIRGDVKYEGVYEWNGKRYDGHELHAESLSLEHPITGCPVMVQAPLPLWATQA 318
>ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citrus clementina]
gi|567881937|ref|XP_006433527.1| hypothetical protein
CICLE_v10001637mg [Citrus clementina]
gi|557535648|gb|ESR46766.1| hypothetical protein
CICLE_v10001637mg [Citrus clementina]
gi|557535649|gb|ESR46767.1| hypothetical protein
CICLE_v10001637mg [Citrus clementina]
Length = 357
Score = 212 bits (540), Expect = 9e-53
Identities = 106/233 (45%), Positives = 143/233 (61%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SGVM+ITK HK+A+K VKA+T+ ++ KTY+ALCI P+P W I I SGHGRSK+GAWR Y
Sbjct: 152 SGVMVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVY 211
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
+ +DVG+VLPGGS VRDM T VLS+NG + K P +
Sbjct: 212 AASDVGRVLPGGSVVRDMVTSFEVLSVNG----------------------EGSFKEPSE 249
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARL 540
+ N +V ++ + +D K + +L+RA+P +GRTHQIRLHCQY +
Sbjct: 250 LQEHEENNIVVEKK-----------AVLDADAKKNEILVRAFPRSGRTHQIRLHCQYLGI 298
Query: 541 PIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWALKS 699
IRGD KY GV W ++ H LHAE++ F+HPVTG V ++APLP W ++
Sbjct: 299 SIRGDVKYEGVYEWNGKRYDGHELHAESLSFDHPVTGCPVMVQAPLPLWGTEA 351
>ref|XP_006664100.1| PREDICTED: RNA pseudouridine synthase 1-like [Oryza brachyantha]
Length = 346
Score = 211 bits (538), Expect = 2e-52
Identities = 111/231 (48%), Positives = 141/231 (61%), Gaps = 1/231 (0%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SG+M+ITK +K+A K VKA+TE + KTYLALCI PTW I I SGHGRSK+GAWR Y
Sbjct: 138 SGLMVITKCNKVAGKLVKAFTEHEVKKTYLALCIGCPPTWEKIKICSGHGRSKHGAWRVY 197
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
+ +DVG+ LPGGS VRDMST VL ING + P
Sbjct: 198 AMSDVGRSLPGGSVVRDMSTQFEVLGING----------------------NCQFREPSN 235
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKN-DIVLLRAYPLTGRTHQIRLHCQYAR 537
+ +D + + E + + ++ SD KN ++L+RAYP +GRTHQIRLHCQY
Sbjct: 236 LEVDEIESITVQE--------KAADLNSNSDVKNSSMILVRAYPRSGRTHQIRLHCQYLG 287
Query: 538 LPIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWA 690
+PIRGD KYGGV+ W ++ HALHAE++ F HPVTG V R+PL WA
Sbjct: 288 IPIRGDVKYGGVIEWNGVDYDGHALHAESLSFVHPVTGLPVTFRSPLASWA 338
>gb|EMS63083.1| RNA pseudourine synthase 1 [Triticum urartu]
Length = 309
Score = 211 bits (537), Expect = 2e-52
Identities = 109/230 (47%), Positives = 138/230 (60%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SG+M+ITK +K+AAK VKA+TE ++ KTYLALCI P W I I SGHGRSK+GAWR Y
Sbjct: 102 SGLMVITKCNKVAAKLVKAFTEHKVKKTYLALCIGYPPAWEKIKICSGHGRSKHGAWRVY 161
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
+ +DVG+ LPGGS+VRDMST VL +G + P
Sbjct: 162 AMSDVGRTLPGGSSVRDMSTKFEVLGTDG----------------------EGQYREPSN 199
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARL 540
+ +D + + E + + + D KN ++ +RAYP +GRTHQIRLHCQY
Sbjct: 200 VDIDDIESITVQE--------KAADQTSNVDVKNHMIFVRAYPQSGRTHQIRLHCQYLGF 251
Query: 541 PIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWA 690
PIRGD KYGGV+ W + HALHAE++ F HPVTG V RAPLP WA
Sbjct: 252 PIRGDVKYGGVIEWNGVDCDGHALHAESLSFVHPVTGLPVTFRAPLPSWA 301
>gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]
Length = 319
Score = 211 bits (536), Expect = 3e-52
Identities = 106/230 (46%), Positives = 140/230 (60%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SG+M+ITK HK+A+K VKA+T ++ KTY+A C+ +P W +I I+SGHGRSK+GAWR Y
Sbjct: 117 SGLMLITKSHKVASKLVKAFTTHKVSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVY 176
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
+ +DVG+ LPGGS VRDM T VLS+NG Q ++ K P +
Sbjct: 177 AASDVGRTLPGGSVVRDMETSFEVLSVNG----------------QRVS------KEPSE 214
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARL 540
DG N ++ E+ + D K D +L+RA P +GR+HQIRLHCQY +
Sbjct: 215 FRKDGNNVLIVEEK-----------ALIDRDGKKDEILVRARPKSGRSHQIRLHCQYLGI 263
Query: 541 PIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWA 690
+RGD KY GV WK T+ H LHAE++ FEHP+T LV L PLP WA
Sbjct: 264 SLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITSLLVVLSTPLPMWA 313
>ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutrema salsugineum]
gi|557088941|gb|ESQ29721.1| hypothetical protein
EUTSA_v10023586mg [Eutrema salsugineum]
Length = 333
Score = 211 bits (536), Expect = 3e-52
Identities = 113/236 (47%), Positives = 144/236 (61%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SGVM+ITK HK+AAK VKA+TE +I K+Y+ALCI SP W+ I + SGHGRSK+GAWR Y
Sbjct: 136 SGVMLITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWSKITVRSGHGRSKHGAWRVY 195
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
+ DVG+VLPGGS VRDM T V+S+NG KT L+
Sbjct: 196 AALDVGRVLPGGSFVRDMETTFEVVSVNG-EKT-------------------EPLEVESV 235
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARL 540
I ++G E GL S +D+V++RA+P +GRTHQIRLHC+Y +
Sbjct: 236 IVVEG----------EPGL----------SCVGDDVVVVRAFPRSGRTHQIRLHCRYLGI 275
Query: 541 PIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWALKSFNC 708
PIRGD KY G+ W+ TFE H LHAE++ F+HPVTG + +RAPLP W C
Sbjct: 276 PIRGDVKYHGMYEWRGRTFEGHELHAESLSFDHPVTGEPIVIRAPLPCWVAGDGEC 331
>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 321
Score = 210 bits (535), Expect = 3e-52
Identities = 108/233 (46%), Positives = 142/233 (60%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SGVM+ITK HK+A+K VKA+T+ +I KTY+ALCI +P W I I+SGHGRSK+G WR Y
Sbjct: 119 SGVMVITKSHKVASKLVKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVY 178
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
+ +DVG+ LPGGSTV+DM T +LS+NG + + F + N+ K
Sbjct: 179 AASDVGQTLPGGSTVKDMETSFELLSVNG-----QGSFKELSEFEKDENILVVEEK---- 229
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARL 540
+ +D K +L+RA+P +GRTHQIRLHCQY +
Sbjct: 230 -------------------------AAKNADVKKVEILVRAFPQSGRTHQIRLHCQYLGI 264
Query: 541 PIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWALKS 699
IRGD KY GV W+ T++ H LHAET+ FEHPVTG V LRAPLP WA+++
Sbjct: 265 SIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPVTGVPVMLRAPLPSWAIQA 317
>tpg|DAA55260.1| TPA: hypothetical protein ZEAMMB73_192305 [Zea mays]
Length = 348
Score = 210 bits (534), Expect = 4e-52
Identities = 113/230 (49%), Positives = 142/230 (61%)
Frame = +1
Query: 1 SGVMIITKQHKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTY 180
SG+M+ITK +K+A K VKA+T+ ++ KTYLALCI P W I I SGHGRSK+GAWR Y
Sbjct: 141 SGLMVITKCNKVAGKLVKAFTDHKVKKTYLALCIGFPPAWEKIKICSGHGRSKHGAWRVY 200
Query: 181 SKNDVGKVLPGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDK 360
+ +DVG+ LPGGS VRDMST VL +NG + D+D +
Sbjct: 201 AMSDVGRSLPGGSVVRDMSTRFEVLGVNGKGQFREPYSLDTDDI--------------EP 246
Query: 361 ITLDGMNQVVATEQLETGLGLQPSYMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQYARL 540
IT+ Q AT+Q G D + ++L+RAYP +GRTHQIRLHCQY L
Sbjct: 247 ITV----QEKATDQTCGG------------DANSSVILVRAYPQSGRTHQIRLHCQYLGL 290
Query: 541 PIRGDAKYGGVLTWKDDTFESHALHAETVCFEHPVTGNLVKLRAPLPEWA 690
PIRGD KYGGV+ W E HALHAE++ F HP+TG + LR+PLP WA
Sbjct: 291 PIRGDVKYGGVIEWDGVECEGHALHAESLSFVHPITGLPITLRSPLPPWA 340