BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00017981
         (1574 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ11585.1| hypothetical protein PRUPE_ppa001063mg [Prunus pe...    75   8e-11
ref|XP_004238100.1| PREDICTED: uncharacterized protein LOC101262...    74   1e-10
ref|XP_006363920.1| PREDICTED: transcription initiation factor T...    73   4e-10
ref|XP_006362063.1| PREDICTED: transcription initiation factor T...    73   4e-10
ref|XP_004148511.1| PREDICTED: uncharacterized protein LOC101206...    72   5e-10
gb|EOY15763.1| TBP-associated factor 4, putative isoform 3, part...    70   2e-09
gb|EOY15762.1| TBP-associated factor 4, putative isoform 2 [Theo...    70   2e-09
gb|EOY15761.1| TBP-associated factor 4, putative isoform 1 [Theo...    70   2e-09
ref|XP_004300119.1| PREDICTED: uncharacterized protein LOC101295...    70   3e-09
ref|XP_003562365.1| PREDICTED: uncharacterized protein LOC100829...    69   4e-09
ref|XP_004512638.1| PREDICTED: serine-rich adhesin for platelets...    69   6e-09
tpg|DAA53325.1| TPA: hypothetical protein ZEAMMB73_642264 [Zea m...    69   6e-09
tpg|DAA53327.1| TPA: hypothetical protein ZEAMMB73_297958 [Zea m...    69   7e-09
ref|XP_006601270.1| PREDICTED: transcription initiation factor T...    68   1e-08
ref|XP_006601269.1| PREDICTED: transcription initiation factor T...    68   1e-08
gb|EEC75552.1| hypothetical protein OsI_12204 [Oryza sativa Indi...    68   1e-08
gb|ABF96849.1| Transcription initiation factor TFIID component T...    68   1e-08
gb|ABF96848.1| Transcription initiation factor TFIID component T...    68   1e-08
ref|XP_006595987.1| PREDICTED: transcription initiation factor T...    67   2e-08
ref|XP_001775389.1| predicted protein [Physcomitrella patens] gi...    67   2e-08

>gb|EMJ11585.1| hypothetical protein PRUPE_ppa001063mg [Prunus persica]
          Length = 920

 Score = 75.1 bits (183), Expect = 8e-11
 Identities = 34/81 (41%), Positives = 52/81 (64%)
 Frame = -1

Query: 254 IPNSTKKPNMFGHSISFGSLLPIILPQISKEQSHQIQQLYSRLRRNEVSKEDFLRSTRTI 75
           IP     P      + FG LLP++LPQ+ K+++ Q+  L+ +L+ NE+SK+ F+R  R++
Sbjct: 188 IPEQPSNPMNRSKQVPFGLLLPVLLPQLDKDRAMQLTTLFGKLKNNEISKDAFVRHIRSV 247

Query: 74  VGDQMLVNAVRQVQKESSQNP 12
           VGDQML  AV +VQ +   NP
Sbjct: 248 VGDQMLKLAVMKVQSQRGANP 268


>ref|XP_004238100.1| PREDICTED: uncharacterized protein LOC101262209 [Solanum
           lycopersicum]
          Length = 934

 Score = 74.3 bits (181), Expect = 1e-10
 Identities = 36/88 (40%), Positives = 56/88 (63%)
 Frame = -1

Query: 272 QPAMGQIPNSTKKPNMFGHSISFGSLLPIILPQISKEQSHQIQQLYSRLRRNEVSKEDFL 93
           + A G I  +       G  + F  L P I PQ+ K+++ Q+Q LY +L++NE+SKE F+
Sbjct: 196 ESATGSISQAAMNIAKQGKQVPFAMLFPHIQPQLDKDRAAQLQTLYVKLKKNEISKESFV 255

Query: 92  RSTRTIVGDQMLVNAVRQVQKESSQNPQ 9
           R+ R+I+GDQML  AV + Q ++S+N Q
Sbjct: 256 RNMRSIIGDQMLKMAVYKFQSQASKNSQ 283


>ref|XP_006363920.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
           [Solanum tuberosum]
          Length = 537

 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 33/71 (46%), Positives = 51/71 (71%)
 Frame = -1

Query: 221 GHSISFGSLLPIILPQISKEQSHQIQQLYSRLRRNEVSKEDFLRSTRTIVGDQMLVNAVR 42
           G  + F  L P I PQ+ K+++ Q+Q LY +L++NE+SKE F+R+ R+I+GDQML  AV 
Sbjct: 195 GKQVPFAMLFPHIQPQLDKDRAAQLQTLYVKLKKNEISKESFVRNMRSIIGDQMLKMAVY 254

Query: 41  QVQKESSQNPQ 9
           + Q ++S+N Q
Sbjct: 255 KFQSQASKNSQ 265


>ref|XP_006362063.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
           [Solanum tuberosum]
          Length = 934

 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 33/71 (46%), Positives = 51/71 (71%)
 Frame = -1

Query: 221 GHSISFGSLLPIILPQISKEQSHQIQQLYSRLRRNEVSKEDFLRSTRTIVGDQMLVNAVR 42
           G  + F  L P I PQ+ K+++ Q+Q LY +L++NE+SKE F+R+ R+I+GDQML  AV 
Sbjct: 213 GKQVPFAMLFPHIQPQLDKDRAAQLQTLYVKLKKNEISKESFVRNMRSIIGDQMLKMAVY 272

Query: 41  QVQKESSQNPQ 9
           + Q ++S+N Q
Sbjct: 273 KFQSQASKNSQ 283


>ref|XP_004148511.1| PREDICTED: uncharacterized protein LOC101206316 [Cucumis sativus]
           gi|449521952|ref|XP_004167993.1| PREDICTED:
           uncharacterized LOC101206316 [Cucumis sativus]
          Length = 898

 Score = 72.4 bits (176), Expect = 5e-10
 Identities = 32/69 (46%), Positives = 52/69 (75%)
 Frame = -1

Query: 212 ISFGSLLPIILPQISKEQSHQIQQLYSRLRRNEVSKEDFLRSTRTIVGDQMLVNAVRQVQ 33
           + F SL+P+++PQ+ K++  Q+Q L++RL+RNE++K+DF+R  R +VGDQML  AV QVQ
Sbjct: 193 VPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVGDQMLRLAVCQVQ 252

Query: 32  KESSQNPQQ 6
            +   + +Q
Sbjct: 253 SQPPPSVRQ 261


>gb|EOY15763.1| TBP-associated factor 4, putative isoform 3, partial [Theobroma
           cacao]
          Length = 707

 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
 Frame = -1

Query: 272 QPAMGQIPNSTKKPNM---FGHSISFGSLLPIILPQISKEQSHQIQQLYSRLRRNEVSKE 102
           Q    Q    T++PN     G  + F  LLP +LPQ+ K+++ Q+  LY +L++NE++K+
Sbjct: 183 QKMSNQQAGGTEQPNNPMNRGKQVPFAVLLPALLPQLDKDRAMQLHTLYGKLKKNEIAKD 242

Query: 101 DFLRSTRTIVGDQMLVNAVR--QVQKESSQNPQQ 6
            F+R  R IVGDQML  AV   QVQ  S+Q P Q
Sbjct: 243 GFVRHMRDIVGDQMLRLAVNKLQVQMSSNQFPLQ 276


>gb|EOY15762.1| TBP-associated factor 4, putative isoform 2 [Theobroma cacao]
          Length = 944

 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
 Frame = -1

Query: 272 QPAMGQIPNSTKKPNM---FGHSISFGSLLPIILPQISKEQSHQIQQLYSRLRRNEVSKE 102
           Q    Q    T++PN     G  + F  LLP +LPQ+ K+++ Q+  LY +L++NE++K+
Sbjct: 184 QKMSNQQAGGTEQPNNPMNRGKQVPFAVLLPALLPQLDKDRAMQLHTLYGKLKKNEIAKD 243

Query: 101 DFLRSTRTIVGDQMLVNAVR--QVQKESSQNPQQ 6
            F+R  R IVGDQML  AV   QVQ  S+Q P Q
Sbjct: 244 GFVRHMRDIVGDQMLRLAVNKLQVQMSSNQFPLQ 277


>gb|EOY15761.1| TBP-associated factor 4, putative isoform 1 [Theobroma cacao]
          Length = 950

 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
 Frame = -1

Query: 272 QPAMGQIPNSTKKPNM---FGHSISFGSLLPIILPQISKEQSHQIQQLYSRLRRNEVSKE 102
           Q    Q    T++PN     G  + F  LLP +LPQ+ K+++ Q+  LY +L++NE++K+
Sbjct: 184 QKMSNQQAGGTEQPNNPMNRGKQVPFAVLLPALLPQLDKDRAMQLHTLYGKLKKNEIAKD 243

Query: 101 DFLRSTRTIVGDQMLVNAVR--QVQKESSQNPQQ 6
            F+R  R IVGDQML  AV   QVQ  S+Q P Q
Sbjct: 244 GFVRHMRDIVGDQMLRLAVNKLQVQMSSNQFPLQ 277


>ref|XP_004300119.1| PREDICTED: uncharacterized protein LOC101295421 [Fragaria vesca
           subsp. vesca]
          Length = 958

 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 34/85 (40%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
 Frame = -1

Query: 272 QPAMGQIPNSTKKPNMFGH---SISFGSLLPIILPQISKEQSHQIQQLYSRLRRNEVSKE 102
           Q    Q   +T++P++  +    + FG LLP++LPQ+ K+++ Q+  L+S+L+ NE+SK+
Sbjct: 176 QKISSQQAMTTEQPSIPANRSKQVPFGLLLPVLLPQLDKDRAMQLTTLFSKLKNNEISKD 235

Query: 101 DFLRSTRTIVGDQMLVNAVRQVQKE 27
            F+R  R++VGDQML  AV +VQ +
Sbjct: 236 AFVRHIRSVVGDQMLKMAVHKVQTQ 260


>ref|XP_003562365.1| PREDICTED: uncharacterized protein LOC100829985 [Brachypodium
           distachyon]
          Length = 806

 Score = 69.3 bits (168), Expect = 4e-09
 Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 4/93 (4%)
 Frame = -1

Query: 284 QPLPQPAMGQIP--NSTKKPNMFGHS--ISFGSLLPIILPQISKEQSHQIQQLYSRLRRN 117
           QPL Q    Q P  N T  P   G +  ++F  L+PI+   + K++  Q+Q ++++LR+N
Sbjct: 145 QPLQQMKSQQSPGTNLTNSPTTVGKAPVVTFHMLIPILRRFLDKDKDIQVQSIFAKLRKN 204

Query: 116 EVSKEDFLRSTRTIVGDQMLVNAVRQVQKESSQ 18
           EVSKE FL+  RTIVGD++L  A  Q Q +++Q
Sbjct: 205 EVSKEHFLKVIRTIVGDKLLKQAASQYQMQAAQ 237


>ref|XP_004512638.1| PREDICTED: serine-rich adhesin for platelets-like [Cicer arietinum]
          Length = 920

 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 29/67 (43%), Positives = 53/67 (79%)
 Frame = -1

Query: 212 ISFGSLLPIILPQISKEQSHQIQQLYSRLRRNEVSKEDFLRSTRTIVGDQMLVNAVRQVQ 33
           + FG LLPI++PQ++K+++ Q+Q L+++L+++E+ K+ F+R  + IVGDQML  A+ +VQ
Sbjct: 194 VPFGLLLPILIPQLAKDRAMQLQTLFNKLKKDEIPKDHFVRLMKGIVGDQMLRIALTKVQ 253

Query: 32  KESSQNP 12
           +++  NP
Sbjct: 254 QQTRSNP 260


>tpg|DAA53325.1| TPA: hypothetical protein ZEAMMB73_642264 [Zea mays]
          Length = 642

 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
 Frame = -1

Query: 263 MGQIPNSTKKPNMFGHSISFGSLLPIILPQISKEQSHQIQQLYSRLRRNEVSKEDFLRST 84
           +GQ  +S  +    G SI F  L+PI+   + +++  Q+Q ++++LRRNEV+K+DFLR  
Sbjct: 112 VGQQASSGTQDTKKGPSIPFNMLIPILQAHLDRDKDMQLQTVWAKLRRNEVNKDDFLRVI 171

Query: 83  RTIVGDQMLVNAVR--------QVQKESSQNPQQQ 3
           R IVGDQML  A          Q Q+ S  N  QQ
Sbjct: 172 RNIVGDQMLKQAAHKVFVQMQAQAQRNSQANSSQQ 206


>tpg|DAA53327.1| TPA: hypothetical protein ZEAMMB73_297958 [Zea mays]
          Length = 526

 Score = 68.6 bits (166), Expect = 7e-09
 Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
 Frame = -1

Query: 263 MGQIPNSTKKPNMFGHSISFGSLLPIILPQISKEQSHQIQQLYSRLRRNEVSKEDFLRST 84
           +GQ  +S  +    G SI F  L+PI+   + +++  Q+Q ++++LRRNEV+K+DFLR T
Sbjct: 112 VGQQASSGTQDTRKGPSIPFNMLIPILQAHLDRDKDMQLQTVWAKLRRNEVNKDDFLRVT 171

Query: 83  RTIVGDQMLVNAVR--------QVQKESSQNPQQQ 3
             IVGDQML  A          Q+Q+ S  N  QQ
Sbjct: 172 VNIVGDQMLKQAAHKVFVQMQAQMQRNSQANSSQQ 206


>ref|XP_006601270.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
           isoform X2 [Glycine max]
          Length = 936

 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 30/69 (43%), Positives = 50/69 (72%)
 Frame = -1

Query: 212 ISFGSLLPIILPQISKEQSHQIQQLYSRLRRNEVSKEDFLRSTRTIVGDQMLVNAVRQVQ 33
           + FG LLPI+LPQ++K+++ Q+Q L+++L++ E+ K+ F+R  + IVGDQML  A+ +VQ
Sbjct: 200 VPFGMLLPILLPQLAKDRAMQLQTLFAKLKKEEIPKDSFVRLMKGIVGDQMLRLALAKVQ 259

Query: 32  KESSQNPQQ 6
            +    P Q
Sbjct: 260 VQPQTRPNQ 268


>ref|XP_006601269.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
           isoform X1 [Glycine max]
          Length = 976

 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 30/69 (43%), Positives = 50/69 (72%)
 Frame = -1

Query: 212 ISFGSLLPIILPQISKEQSHQIQQLYSRLRRNEVSKEDFLRSTRTIVGDQMLVNAVRQVQ 33
           + FG LLPI+LPQ++K+++ Q+Q L+++L++ E+ K+ F+R  + IVGDQML  A+ +VQ
Sbjct: 240 VPFGMLLPILLPQLAKDRAMQLQTLFAKLKKEEIPKDSFVRLMKGIVGDQMLRLALAKVQ 299

Query: 32  KESSQNPQQ 6
            +    P Q
Sbjct: 300 VQPQTRPNQ 308


>gb|EEC75552.1| hypothetical protein OsI_12204 [Oryza sativa Indica Group]
          Length = 819

 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
 Frame = -1

Query: 284 QPLPQPAMGQIP--NSTKKPNMFGHS--ISFGSLLPIILPQISKEQSHQIQQLYSRLRRN 117
           QPL Q    Q P  N T      G    ++F  L+PI+   + K++  Q+Q ++++LR+N
Sbjct: 137 QPLQQMRSQQTPSTNQTNSAPTVGKPPVVTFHMLIPILRRHLDKDKDMQVQSIFTKLRKN 196

Query: 116 EVSKEDFLRSTRTIVGDQMLVNAVRQVQKESS---QNPQ 9
           EVSKE FL+  RTIVGD++L  A  Q Q +++   +NPQ
Sbjct: 197 EVSKEHFLKVVRTIVGDKLLKQAAAQYQAQAAHGQRNPQ 235


>gb|ABF96849.1| Transcription initiation factor TFIID component TAF4 family
           protein, expressed [Oryza sativa Japonica Group]
          Length = 685

 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
 Frame = -1

Query: 284 QPLPQPAMGQIP--NSTKKPNMFGHS--ISFGSLLPIILPQISKEQSHQIQQLYSRLRRN 117
           QPL Q    Q P  N T      G    ++F  L+PI+   + K++  Q+Q ++++LR+N
Sbjct: 137 QPLQQMRSQQTPSTNQTNSAPTVGKPPVVTFHMLIPILRRHLDKDKDMQVQSIFTKLRKN 196

Query: 116 EVSKEDFLRSTRTIVGDQMLVNAVRQVQKESS---QNPQ 9
           EVSKE FL+  RTIVGD++L  A  Q Q +++   +NPQ
Sbjct: 197 EVSKEHFLKVVRTIVGDKLLKQAAAQYQAQAAHGQRNPQ 235


>gb|ABF96848.1| Transcription initiation factor TFIID component TAF4 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|222625198|gb|EEE59330.1| hypothetical protein
           OsJ_11407 [Oryza sativa Japonica Group]
          Length = 819

 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
 Frame = -1

Query: 284 QPLPQPAMGQIP--NSTKKPNMFGHS--ISFGSLLPIILPQISKEQSHQIQQLYSRLRRN 117
           QPL Q    Q P  N T      G    ++F  L+PI+   + K++  Q+Q ++++LR+N
Sbjct: 137 QPLQQMRSQQTPSTNQTNSAPTVGKPPVVTFHMLIPILRRHLDKDKDMQVQSIFTKLRKN 196

Query: 116 EVSKEDFLRSTRTIVGDQMLVNAVRQVQKESS---QNPQ 9
           EVSKE FL+  RTIVGD++L  A  Q Q +++   +NPQ
Sbjct: 197 EVSKEHFLKVVRTIVGDKLLKQAAAQYQAQAAHGQRNPQ 235


>ref|XP_006595987.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
           [Glycine max]
          Length = 935

 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 30/69 (43%), Positives = 50/69 (72%)
 Frame = -1

Query: 212 ISFGSLLPIILPQISKEQSHQIQQLYSRLRRNEVSKEDFLRSTRTIVGDQMLVNAVRQVQ 33
           + FG LLPI+LPQ++K+++ Q+Q L+++L++ E+ K+ F+R  + IVGDQML  A+ +VQ
Sbjct: 200 VPFGMLLPILLPQLAKDRAMQLQTLFAKLKKEEIPKDSFVRLMKGIVGDQMLRLALAKVQ 259

Query: 32  KESSQNPQQ 6
            +    P Q
Sbjct: 260 VQPQIRPNQ 268


>ref|XP_001775389.1| predicted protein [Physcomitrella patens]
           gi|162673334|gb|EDQ59859.1| predicted protein
           [Physcomitrella patens]
          Length = 1382

 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
 Frame = -1

Query: 212 ISFGSLLPIILPQISKEQSHQIQQLYSRLR-----RNEVSKEDFLRSTRTIVGDQMLVNA 48
           ISFG L+P++ P +   QS Q+  LY R +     +NE+++EDF+R  R IVGDQ+LV  
Sbjct: 253 ISFGELMPLLQPHLPPAQSEQLSALYQRFKASFGAQNEITREDFVRGARAIVGDQVLVQT 312

Query: 47  VRQVQKESSQ 18
           +RQ+ K+  Q
Sbjct: 313 IRQMHKQHPQ 322