BLASTX nr result
ID: Ephedra28_contig00017979
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra28_contig00017979 (2168 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004503464.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa... 198 7e-48 ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]... 194 1e-46 ref|XP_003532480.1| PREDICTED: CRS2-associated factor 1, chlorop... 190 2e-45 gb|ESW32299.1| hypothetical protein PHAVU_002G310400g [Phaseolus... 187 2e-44 ref|XP_003567742.1| PREDICTED: CRS2-associated factor 1, chlorop... 184 1e-43 ref|NP_001043122.1| Os01g0495900 [Oryza sativa Japonica Group] g... 183 3e-43 gb|EEC70705.1| hypothetical protein OsI_02075 [Oryza sativa Indi... 183 3e-43 emb|CBI28022.3| unnamed protein product [Vitis vinifera] 181 2e-42 ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chlorop... 181 2e-42 ref|XP_002535109.1| conserved hypothetical protein [Ricinus comm... 180 2e-42 ref|XP_006644195.1| PREDICTED: CRS2-associated factor 1, chlorop... 179 4e-42 ref|XP_006853609.1| hypothetical protein AMTR_s00056p00043140 [A... 179 4e-42 gb|ACF78582.1| unknown [Zea mays] gi|194700546|gb|ACF84357.1| un... 178 7e-42 ref|NP_001105220.1| CRS2-associated factor 1, chloroplastic prec... 178 7e-42 ref|XP_002445773.1| hypothetical protein SORBIDRAFT_07g025550 [S... 177 2e-41 ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Popu... 175 8e-41 ref|XP_002332503.1| predicted protein [Populus trichocarpa] 175 8e-41 ref|XP_004984210.1| PREDICTED: CRS2-associated factor 1, chlorop... 174 1e-40 gb|EMJ04984.1| hypothetical protein PRUPE_ppa001872mg [Prunus pe... 174 1e-40 ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chlorop... 174 1e-40 >ref|XP_004503464.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 1, chloroplastic-like [Cicer arietinum] Length = 706 Score = 198 bits (504), Expect = 7e-48 Identities = 139/404 (34%), Positives = 208/404 (51%), Gaps = 35/404 (8%) Frame = +1 Query: 319 PHYRMRVRLRPPEP----ATPKEVLHSDPRSREAIHGKPLSKEEVKYLVHSREHAKPLFQ 486 PH + ++ P P +PK V RSRE + G+PL+KEE+K LV S + Sbjct: 147 PHKKGVKPVQSPGPYLPGTSPKYV-----RSREEVLGEPLTKEEIKVLVQSCLKSSRQLN 201 Query: 487 IGREGFKPIMVFYAQRHWKRRENWVFKIKCMGIASLDMPGLCREIEEKTGGKIIHVDKVI 666 +GR+GF M+ HWKRR V KIKC+G+ ++DM +C ++EEKTGGK+I+ + Sbjct: 202 MGRDGFTHNMLDNIHAHWKRRR--VCKIKCLGVCTVDMDNVCHQLEEKTGGKVIYRRGGV 259 Query: 667 VYVFRGRHYNCRIKPVFDNHLYLAQPQAKLPYIKSPLCGAPEGLTQEEADALREKGRSLP 846 +Y+FRGR+YN + +P+F L+ P P + PEGLT EEA +R+KGR+L Sbjct: 260 LYLFRGRNYNYKTRPLFPLMLWKPVP----PVYPKLIQRVPEGLTLEEATEMRQKGRTLT 315 Query: 847 PLCNPGKNGKYYFLVDRIRNAFHECDLVRLDCRSLTSRDIVAMRIKLTLLVPCEVLSNEE 1026 P+C GKNG Y+ LV +R AF EC+LVR++C+ L D + KL LVPC +LS E Sbjct: 316 PICKIGKNGVYFNLVKNVREAFEECELVRINCQGLNKSDYRKIGAKLRDLVPCTLLSYEN 375 Query: 1027 NYLLLWKTK---------ASDSMELG-TDTVNTEY---VTEFSETSSKN---------ST 1140 ++L+W+ + D E D N Y +E + S+ N S Sbjct: 376 EHILMWRGRNWKPSLPDLRDDRKEANKVDPDNKNYKALPSEALDVSAPNLHNNPAELVSN 435 Query: 1141 IMSDKDISFLLDSKLEGDFVEYSSPSLATSSNDTFLTSG---NFIHDSVAESLNEFGQNE 1311 + D ISF LD + D VE P+ + + + + N DS E E ++ Sbjct: 436 LSHDTSISFCLDD-VTVDKVEVPCPTKNSKRSMSVIADAEITNVATDSYGEP--EPCRST 492 Query: 1312 SHYPSASLEGGHSSVKL------MEGISVNRKEDNFLTERVSTA 1425 S + S +GGH + E + +N +D ++R+ST+ Sbjct: 493 SPGTNISHDGGHITCPSNAMSDNHEMLDINIMDDKSFSDRLSTS 536 >ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula] gi|355524767|gb|AET05221.1| CRS2-associated factor [Medicago truncatula] Length = 698 Score = 194 bits (494), Expect = 1e-46 Identities = 129/369 (34%), Positives = 195/369 (52%), Gaps = 8/369 (2%) Frame = +1 Query: 319 PHYRMRVRLRPPEPATPKEVLHSDPR---SREAIHGKPLSKEEVKYLVHSREHAKPLFQI 489 PH + ++ P P P + PR SRE + G+PL+KEE+ LV S + + Sbjct: 138 PHKKGVKPVQSPGPFLPG----TSPRYVMSREEVLGEPLTKEEINELVRSTLKSSRQLNL 193 Query: 490 GREGFKPIMVFYAQRHWKRRENWVFKIKCMGIASLDMPGLCREIEEKTGGKIIHVDKVIV 669 GR+GF M+ HWKRR V KIKC+G+ ++DM +C+++EEKTGGK+I+ ++ Sbjct: 194 GRDGFIHNMLDNIHAHWKRRR--VCKIKCIGVCTVDMDNVCQQLEEKTGGKVIYRRGGVI 251 Query: 670 YVFRGRHYNCRIKPVFDNHLYLAQPQAKLPYIKSPLCGAPEGLTQEEADALREKGRSLPP 849 Y+FRGR+YN + +P F L+ P P + PEGLT EEA +R+KGR+L P Sbjct: 252 YLFRGRNYNHKTRPRFPLMLWKPVP----PVYPRLIQQVPEGLTLEEATEMRQKGRTLTP 307 Query: 850 LCNPGKNGKYYFLVDRIRNAFHECDLVRLDCRSLTSRDIVAMRIKLTLLVPCEVLSNEEN 1029 +C GKNG YY LV+ +R AF EC+LVR++C+ L D + KL LVPC +LS E Sbjct: 308 ICKLGKNGVYYNLVNNVREAFEECELVRVNCQGLNKSDYRKIGAKLRDLVPCTLLSYENE 367 Query: 1030 YLLLWKTKASDSMELGTDTVNTEYVTEFSETSSKNSTIMSDKDISFLLDSKLEGDFVEYS 1209 ++L+W+ + S + V +F E + ++ +DK L+ + ++ S Sbjct: 368 HILMWRGRNWKSS-------FPDLVEDFKEATKADADNKNDK--------TLQSEALDVS 412 Query: 1210 SPSLATS-----SNDTFLTSGNFIHDSVAESLNEFGQNESHYPSASLEGGHSSVKLMEGI 1374 +PSL + SN + TS +F D V S S S+ S K+ E Sbjct: 413 TPSLNHNPVEHVSNLSHDTSISFCPDDVTVDKVPCPTKNSK-QSMSVVADASLTKVYEAE 471 Query: 1375 SVNRKEDNF 1401 + N D++ Sbjct: 472 TTNVATDSY 480 >ref|XP_003532480.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine max] Length = 723 Score = 190 bits (483), Expect = 2e-45 Identities = 143/502 (28%), Positives = 237/502 (47%), Gaps = 16/502 (3%) Frame = +1 Query: 394 RSREAIHGKPLSKEEVKYLVHSREHAKPLFQIGREGFKPIMVFYAQRHWKRRENWVFKIK 573 +SRE I G+PL++EE++ LV S A+ IGR+G M+ HWKRR KI+ Sbjct: 191 KSREEILGEPLTQEEIRDLVKSCMKAQRQLNIGRDGLTHNMLDNIHAHWKRRR--ACKIR 248 Query: 574 CMGIASLDMPGLCREIEEKTGGKIIHVDKVIVYVFRGRHYNCRIKPVFDNHLYLAQPQAK 753 C G+ ++DM +C ++EE+TGGKIIH ++Y+FRGR+YN + +P F L+ P Sbjct: 249 CKGVCTVDMDNVCHQLEERTGGKIIHRKGGVLYLFRGRNYNYKTRPHFPLMLWKPVP--- 305 Query: 754 LPYIKSPLCGAPEGLTQEEADALREKGRSLPPLCNPGKNGKYYFLVDRIRNAFHECDLVR 933 P + PEGLT EEA +R+KG +L P+C GKNG Y LV +R AF EC+LVR Sbjct: 306 -PVYPRLVQRVPEGLTLEEATKMRQKGSTLIPICKLGKNGVYCDLVKTVREAFEECELVR 364 Query: 934 LDCRSLTSRDIVAMRIKLTLLVPCEVLSNEENYLLLWK--TKASDSMELGTDTVNTEYVT 1107 ++C+ L D + KL LVPC +LS E ++L+W+ S + G D ++ + Sbjct: 365 INCQGLNKSDYRKIGAKLRDLVPCTLLSFEYEHILMWRGPNWKSSIPDRGDDRKESKQI- 423 Query: 1108 EFSETSSKNSTIMSDKDISFLLDSKLEGDFVEYSSPSLATSSNDTFLTSGNFIHDSVAES 1287 E KN L + +E+S+PSL + + N +HD+ S Sbjct: 424 ---EVDHKNY-------------KPLPSEALEFSAPSLQMNPLE---HESNLLHDTSISS 464 Query: 1288 LN----------EFGQNESHYPSASLEGGHSSVKLMEGISVNRKEDNFLTERVSTAGVPY 1437 ++ + SH + + S K+ + + N D++ T+ +P Sbjct: 465 ISSDVTLDKVEVSYPNENSHQSMSGVTEVPSLTKIYDVETTNDSTDSYAEPEPRTSLIPS 524 Query: 1438 LRDGLEHCDMFSSWELDS-REPENLKHSYQTSDFSDGTSYNNFGTRNLIQDTNYFRLRGS 1614 + + H D + + + E +H + SDG S + G+ + ++ S Sbjct: 525 MT--IPHYDSHAEFSSKAMSESHGTEHIMDSKSCSDGLSASISGSHATLGGSD-----NS 577 Query: 1615 YHGGTEAXXXXXXXXXXXXXXXXKSNDCMLSVETINKIGYKMKASSRLEALW---DKAIK 1785 +G ++ SN + ++ + A+ ++A+W ++A++ Sbjct: 578 TNGMVDS----------------HSNKLLDALGEEDVSQAPRSAAPSMKAIWLLLEQAVE 621 Query: 1786 SGKLHVLDRSVLD*CAIYKEPI 1851 G VLD+ LD IY+ + Sbjct: 622 KGSALVLDKDSLDADNIYQNTV 643 >gb|ESW32299.1| hypothetical protein PHAVU_002G310400g [Phaseolus vulgaris] Length = 726 Score = 187 bits (474), Expect = 2e-44 Identities = 102/250 (40%), Positives = 153/250 (61%), Gaps = 2/250 (0%) Frame = +1 Query: 394 RSREAIHGKPLSKEEVKYLVHSREHAKPLFQIGREGFKPIMVFYAQRHWKRRENWVFKIK 573 +SRE I G+PL+KEE++ LV+S + +GR+GF M+ HWKRR V KI+ Sbjct: 195 KSREEILGEPLTKEEIRELVNSCMKTQRQLNMGRDGFTHNMLDNIHAHWKRRR--VCKIR 252 Query: 574 CMGIASLDMPGLCREIEEKTGGKIIHVDKVIVYVFRGRHYNCRIKPVFDNHLYLAQPQAK 753 C+G+ ++DM +C+++EEKTGGK+I VY+FRGR+YN + +P F L L +P + Sbjct: 253 CLGVCTVDMDNVCQQLEEKTGGKVIFRRGGKVYLFRGRNYNHKTRPRFP--LMLWKPVS- 309 Query: 754 LPYIKSPLCGAPEGLTQEEADALREKGRSLPPLCNPGKNGKYYFLVDRIRNAFHECDLVR 933 P S + P+GLT EE +REKGR+L P+C GKNG YY+LV+ +R AF ECDLVR Sbjct: 310 -PVYPSLIPRVPKGLTLEEVTKMREKGRTLIPICQLGKNGVYYYLVNTVREAFEECDLVR 368 Query: 934 LDCRSLTSRDIVAMRIKLTLLVPCEVLSNEENYLLLWK--TKASDSMELGTDTVNTEYVT 1107 ++C+ L D + KL LVPC ++S + ++L+W+ S +LG D + Sbjct: 369 INCQGLNKSDYRKIGAKLRDLVPCTLISFQYEHILMWRGPNWKSSIPDLGDDLKEANKIV 428 Query: 1108 EFSETSSKNS 1137 + +++S Sbjct: 429 DDKHFETRSS 438 >ref|XP_003567742.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Brachypodium distachyon] Length = 702 Score = 184 bits (468), Expect = 1e-43 Identities = 104/244 (42%), Positives = 144/244 (59%), Gaps = 1/244 (0%) Frame = +1 Query: 319 PHYRMRVR-LRPPEPATPKEVLHSDPRSREAIHGKPLSKEEVKYLVHSREHAKPLFQIGR 495 PH + V+ ++ P P +SRE + G+PLSKEEV LV AK IGR Sbjct: 147 PHGKKGVKPVQSPGPFLAGMEPRYQAQSREEVLGEPLSKEEVAELVKGNLKAKRQLNIGR 206 Query: 496 EGFKPIMVFYAQRHWKRRENWVFKIKCMGIASLDMPGLCREIEEKTGGKIIHVDKVIVYV 675 +G M+ HWKR+ V KIKC G+ ++DM +C+++EE+ GGK+IH +V++ Sbjct: 207 DGLTHNMLENIHAHWKRKR--VCKIKCKGVCTVDMDNVCQQLEERVGGKVIHRQGGVVFL 264 Query: 676 FRGRHYNCRIKPVFDNHLYLAQPQAKLPYIKSPLCGAPEGLTQEEADALREKGRSLPPLC 855 FRGR+YN R +PVF L L +P A P + P+GLT +EA +R+KGR L P+C Sbjct: 265 FRGRNYNYRTRPVFP--LMLWKPAA--PVYPRLVKTVPDGLTSDEATEMRKKGRQLTPVC 320 Query: 856 NPGKNGKYYFLVDRIRNAFHECDLVRLDCRSLTSRDIVAMRIKLTLLVPCEVLSNEENYL 1035 GKNG Y LV+ +R AF CDLVR+DC L D + KL LVPC +LS E ++ Sbjct: 321 KLGKNGVYANLVNEVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHI 380 Query: 1036 LLWK 1047 L+W+ Sbjct: 381 LMWR 384 >ref|NP_001043122.1| Os01g0495900 [Oryza sativa Japonica Group] gi|75109409|sp|Q5VMQ5.1|CAF1P_ORYSJ RecName: Full=CRS2-associated factor 1, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1; Flags: Precursor gi|55297418|dbj|BAD69270.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group] gi|55297612|dbj|BAD68987.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group] gi|113532653|dbj|BAF05036.1| Os01g0495900 [Oryza sativa Japonica Group] gi|215694476|dbj|BAG89423.1| unnamed protein product [Oryza sativa Japonica Group] gi|222618506|gb|EEE54638.1| hypothetical protein OsJ_01906 [Oryza sativa Japonica Group] Length = 701 Score = 183 bits (464), Expect = 3e-43 Identities = 95/217 (43%), Positives = 136/217 (62%) Frame = +1 Query: 397 SREAIHGKPLSKEEVKYLVHSREHAKPLFQIGREGFKPIMVFYAQRHWKRRENWVFKIKC 576 SRE + G+PL+KEEV LV + K IGR+G M+ HWKR+ V KIKC Sbjct: 176 SREEVLGEPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKR--VCKIKC 233 Query: 577 MGIASLDMPGLCREIEEKTGGKIIHVDKVIVYVFRGRHYNCRIKPVFDNHLYLAQPQAKL 756 G+ ++DM +C+++EEK GGK+IH ++++FRGR+YN R +P++ L L +P A Sbjct: 234 KGVCTVDMDNVCQQLEEKVGGKVIHHQGGVIFLFRGRNYNYRTRPIYP--LMLWKPAA-- 289 Query: 757 PYIKSPLCGAPEGLTQEEADALREKGRSLPPLCNPGKNGKYYFLVDRIRNAFHECDLVRL 936 P + P+GLT +EA+ +R++GR LPP+C GKNG Y LV ++R AF CDLVR+ Sbjct: 290 PVYPRLVKKIPDGLTPDEAEDMRKRGRQLPPICKLGKNGVYLNLVKQVREAFEACDLVRV 349 Query: 937 DCRSLTSRDIVAMRIKLTLLVPCEVLSNEENYLLLWK 1047 DC L D + KL LVPC +LS E ++L+W+ Sbjct: 350 DCSGLNKSDCRKIGAKLKDLVPCTLLSFEFEHILMWR 386 >gb|EEC70705.1| hypothetical protein OsI_02075 [Oryza sativa Indica Group] Length = 701 Score = 183 bits (464), Expect = 3e-43 Identities = 95/217 (43%), Positives = 136/217 (62%) Frame = +1 Query: 397 SREAIHGKPLSKEEVKYLVHSREHAKPLFQIGREGFKPIMVFYAQRHWKRRENWVFKIKC 576 SRE + G+PL+KEEV LV + K IGR+G M+ HWKR+ V KIKC Sbjct: 176 SREEVLGEPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKR--VCKIKC 233 Query: 577 MGIASLDMPGLCREIEEKTGGKIIHVDKVIVYVFRGRHYNCRIKPVFDNHLYLAQPQAKL 756 G+ ++DM +C+++EEK GGK+IH ++++FRGR+YN R +P++ L L +P A Sbjct: 234 KGVCTVDMDNVCQQLEEKVGGKVIHHQGGVIFLFRGRNYNYRTRPIYP--LMLWKPAA-- 289 Query: 757 PYIKSPLCGAPEGLTQEEADALREKGRSLPPLCNPGKNGKYYFLVDRIRNAFHECDLVRL 936 P + P+GLT +EA+ +R++GR LPP+C GKNG Y LV ++R AF CDLVR+ Sbjct: 290 PVYPRLVKKIPDGLTPDEAEDMRKRGRQLPPICKLGKNGVYLNLVKQVREAFEACDLVRV 349 Query: 937 DCRSLTSRDIVAMRIKLTLLVPCEVLSNEENYLLLWK 1047 DC L D + KL LVPC +LS E ++L+W+ Sbjct: 350 DCSGLNKSDCRKIGAKLKDLVPCTLLSFEFEHILMWR 386 >emb|CBI28022.3| unnamed protein product [Vitis vinifera] Length = 723 Score = 181 bits (458), Expect = 2e-42 Identities = 123/349 (35%), Positives = 183/349 (52%), Gaps = 31/349 (8%) Frame = +1 Query: 394 RSREAIHGKPLSKEEVKYLVHSREHAKPLFQIGREGFKPIMVFYAQRHWKRRENWVFKIK 573 RSRE I G+PL++EE+K LV +K +GR+G M+ HWKRR V KIK Sbjct: 234 RSREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRR--VCKIK 291 Query: 574 CMGIASLDMPGLCREIEEKTGGKIIHVDKVIVYVFRGRHYNCRIKPVFDNHLYLAQPQAK 753 C G+ ++DM + +++EEKTGGK+I+ ++++FRGR+YN R +P F L L +P Sbjct: 292 CKGVCTVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRNYNYRNRPRFP--LMLWKPVT- 348 Query: 754 LPYIKSPLCGAPEGLTQEEADALREKGRSLPPLCNPGKNGKYYFLVDRIRNAFHECDLVR 933 P + APEGLT EEA A+R+KGR L P+C KNG Y LV+ +R AF EC+LVR Sbjct: 349 -PVYPRLVQRAPEGLTLEEAGAMRKKGRKLIPICKLAKNGVYTDLVNNVREAFEECELVR 407 Query: 934 LDCRSLTSRDIVAMRIKLTLLVPCEVLSNEENYLLLWK--------TKASDSMELGTDTV 1089 ++C+ L + D + KL LVPC ++S E ++L+W+ K D + ++ Sbjct: 408 INCQGLNASDYRKIGAKLKDLVPCVLISFEHEHILMWRGSDWKFLHPKPEDGCKEAKESD 467 Query: 1090 NTEYVT-----EFSETSSKNSTIMSDKDISF-LLDS----KLEGDFVEYSSPSLATSSND 1239 N + E E S+ S+ +S KD S +LD+ + D + L++ ND Sbjct: 468 NNSEASIPPPFEGQELSASCSSKISVKDTSLDMLDTIASPVINEDVAMDKTEDLSSKGND 527 Query: 1240 TFLTSGN-------------FIHDSVAESLNEFGQNESHYPSASLEGGH 1347 GN + D+V++ G NES L+ H Sbjct: 528 ILSFEGNDKPFAATQLVKTAYNWDTVSDDTG--GTNESEIILTKLDNAH 574 >ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera] Length = 752 Score = 181 bits (458), Expect = 2e-42 Identities = 123/349 (35%), Positives = 183/349 (52%), Gaps = 31/349 (8%) Frame = +1 Query: 394 RSREAIHGKPLSKEEVKYLVHSREHAKPLFQIGREGFKPIMVFYAQRHWKRRENWVFKIK 573 RSRE I G+PL++EE+K LV +K +GR+G M+ HWKRR V KIK Sbjct: 234 RSREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRR--VCKIK 291 Query: 574 CMGIASLDMPGLCREIEEKTGGKIIHVDKVIVYVFRGRHYNCRIKPVFDNHLYLAQPQAK 753 C G+ ++DM + +++EEKTGGK+I+ ++++FRGR+YN R +P F L L +P Sbjct: 292 CKGVCTVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRNYNYRNRPRFP--LMLWKPVT- 348 Query: 754 LPYIKSPLCGAPEGLTQEEADALREKGRSLPPLCNPGKNGKYYFLVDRIRNAFHECDLVR 933 P + APEGLT EEA A+R+KGR L P+C KNG Y LV+ +R AF EC+LVR Sbjct: 349 -PVYPRLVQRAPEGLTLEEAGAMRKKGRKLIPICKLAKNGVYTDLVNNVREAFEECELVR 407 Query: 934 LDCRSLTSRDIVAMRIKLTLLVPCEVLSNEENYLLLWK--------TKASDSMELGTDTV 1089 ++C+ L + D + KL LVPC ++S E ++L+W+ K D + ++ Sbjct: 408 INCQGLNASDYRKIGAKLKDLVPCVLISFEHEHILMWRGSDWKFLHPKPEDGCKEAKESD 467 Query: 1090 NTEYVT-----EFSETSSKNSTIMSDKDISF-LLDS----KLEGDFVEYSSPSLATSSND 1239 N + E E S+ S+ +S KD S +LD+ + D + L++ ND Sbjct: 468 NNSEASIPPPFEGQELSASCSSKISVKDTSLDMLDTIASPVINEDVAMDKTEDLSSKGND 527 Query: 1240 TFLTSGN-------------FIHDSVAESLNEFGQNESHYPSASLEGGH 1347 GN + D+V++ G NES L+ H Sbjct: 528 ILSFEGNDKPFAATQLVKTAYNWDTVSDDTG--GTNESEIILTKLDNAH 574 >ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis] gi|223524018|gb|EEF27274.1| conserved hypothetical protein [Ricinus communis] Length = 748 Score = 180 bits (457), Expect = 2e-42 Identities = 105/282 (37%), Positives = 156/282 (55%), Gaps = 10/282 (3%) Frame = +1 Query: 340 RLRPPEPATPKEVLHSDP----------RSREAIHGKPLSKEEVKYLVHSREHAKPLFQI 489 +L PP+ K V P SRE I G+PL+ EEVK L+ + + Sbjct: 214 KLPPPDKKGVKPVQKPGPFLPGAGPRYVYSREEILGEPLTTEEVKILIEGCLKTRRQLNM 273 Query: 490 GREGFKPIMVFYAQRHWKRRENWVFKIKCMGIASLDMPGLCREIEEKTGGKIIHVDKVIV 669 GR+G M+ HWKRR V KIKCMG+ ++DM +C+++EE+TGGK+I+ +V Sbjct: 274 GRDGLTHNMLDNIHAHWKRRR--VCKIKCMGVCTVDMDNVCQQLEERTGGKVIYRKGGVV 331 Query: 670 YVFRGRHYNCRIKPVFDNHLYLAQPQAKLPYIKSPLCGAPEGLTQEEADALREKGRSLPP 849 Y+FRGR+YN R +P F L L +P P + APEGLT EEA +R KGR L P Sbjct: 332 YLFRGRNYNYRTRPRFP--LMLWKPVT--PVYPRLIKRAPEGLTLEEASEMRRKGRKLIP 387 Query: 850 LCNPGKNGKYYFLVDRIRNAFHECDLVRLDCRSLTSRDIVAMRIKLTLLVPCEVLSNEEN 1029 +C KNG Y LV +R AF EC+LVR+DC+ + D + KL LVPC ++S E Sbjct: 388 ICKLAKNGVYCNLVKEVREAFEECELVRIDCQGVNGSDYRKVGAKLKELVPCLLISFEHE 447 Query: 1030 YLLLWKTKASDSMELGTDTVNTEYVTEFSETSSKNSTIMSDK 1155 ++L+W+ + S + + E + +++ ++++ D+ Sbjct: 448 HILMWRGRDWKSSMIKPVNDSVEAIGSDVNSATSIASVLEDQ 489 >ref|XP_006644195.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Oryza brachyantha] Length = 534 Score = 179 bits (454), Expect = 4e-42 Identities = 94/217 (43%), Positives = 134/217 (61%) Frame = +1 Query: 397 SREAIHGKPLSKEEVKYLVHSREHAKPLFQIGREGFKPIMVFYAQRHWKRRENWVFKIKC 576 SR + G+PLSKEE+ LV + K IGR+G M+ HWKR+ V KIKC Sbjct: 9 SRAEVLGEPLSKEEIDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKR--VCKIKC 66 Query: 577 MGIASLDMPGLCREIEEKTGGKIIHVDKVIVYVFRGRHYNCRIKPVFDNHLYLAQPQAKL 756 G+ ++DM +C+++EEK GGK+IH ++++FRGR+YN R +P + L L +P A Sbjct: 67 KGVCTVDMDNVCQQLEEKVGGKVIHRQGGVIFLFRGRNYNYRTRPSYP--LMLWKPAA-- 122 Query: 757 PYIKSPLCGAPEGLTQEEADALREKGRSLPPLCNPGKNGKYYFLVDRIRNAFHECDLVRL 936 P + P+GLT +EA+ +R++GR LPP+C GKNG Y LV ++R AF CDLVR+ Sbjct: 123 PVYPRLVKKIPDGLTPDEAEDMRKRGRQLPPICKLGKNGVYLNLVKQVREAFGACDLVRV 182 Query: 937 DCRSLTSRDIVAMRIKLTLLVPCEVLSNEENYLLLWK 1047 DC L D + KL LVPC +LS E ++L+W+ Sbjct: 183 DCSGLNKSDCRKLGAKLKDLVPCTLLSFEFEHILMWR 219 >ref|XP_006853609.1| hypothetical protein AMTR_s00056p00043140 [Amborella trichopoda] gi|548857270|gb|ERN15076.1| hypothetical protein AMTR_s00056p00043140 [Amborella trichopoda] Length = 977 Score = 179 bits (454), Expect = 4e-42 Identities = 107/281 (38%), Positives = 159/281 (56%), Gaps = 5/281 (1%) Frame = +1 Query: 319 PHYRMRVRLRPPEPATPKEVLHSDPR---SREAIHGKPLSKEEVKYLVHSREHAKPLFQI 489 PH + ++ P P P + PR SRE I G+PL+ EEV L+ + +K + Sbjct: 375 PHKKGVKPVQAPGPYLPG----TGPRYVKSREEILGEPLTTEEVNSLIRTCLKSKRQLNM 430 Query: 490 GREGFKPIMVFYAQRHWKRRENWVFKIKCMGIASLDMPGLCREIEEKTGGKIIHVDKVIV 669 GR+G M+ HWKR KIKC G+ ++DM +C ++EEKTGGKII+ ++ Sbjct: 431 GRDGLTHNMLDNIHAHWKRLR--ACKIKCKGVCTVDMDNVCEQLEEKTGGKIIYRRGGVL 488 Query: 670 YVFRGRHYNCRIKPVFDNHLYLAQPQAKLPYIKSPLCGAPEGLTQEEADALREKGRSLPP 849 Y+FRGR+YN R++P F L L +P + PL PEGLT EEA +R+KGR +PP Sbjct: 489 YLFRGRNYNYRLRPRFP--LMLWRPITPVYPRLIPL--VPEGLTLEEAKEMRKKGRKVPP 544 Query: 850 LCNPGKNGKYYFLVDRIRNAFHECDLVRLDCRSLTSRDIVAMRIKLTLLVPCEVLSNEEN 1029 +C KNG Y LV ++ AF EC+LVR++C+ L + D + KL +VPC ++S E Sbjct: 545 ICKLAKNGVYVDLVKNVKEAFEECELVRINCQGLNASDYKKIGAKLKDIVPCVLISFENE 604 Query: 1030 YLLLWKTK--ASDSMELGTDTVNTEYVTEFSETSSKNSTIM 1146 ++L+W+ + S +L D+ E SET + + I+ Sbjct: 605 HILMWRGRDWTSSPSKLENDSETLEIAEVSSETGAPDPQIL 645 >gb|ACF78582.1| unknown [Zea mays] gi|194700546|gb|ACF84357.1| unknown [Zea mays] gi|223974875|gb|ACN31625.1| unknown [Zea mays] Length = 560 Score = 178 bits (452), Expect = 7e-42 Identities = 102/244 (41%), Positives = 141/244 (57%) Frame = +1 Query: 397 SREAIHGKPLSKEEVKYLVHSREHAKPLFQIGREGFKPIMVFYAQRHWKRRENWVFKIKC 576 SRE I G+PL+KEEV LV +K +GR+G M+ HWKR+ V KIKC Sbjct: 62 SREDILGEPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKR--VCKIKC 119 Query: 577 MGIASLDMPGLCREIEEKTGGKIIHVDKVIVYVFRGRHYNCRIKPVFDNHLYLAQPQAKL 756 G+ ++DM +C ++EEK GGK+IH ++++FRGR+YN R +P F L L +P A Sbjct: 120 KGVCTIDMDNICHQLEEKVGGKVIHRQGGVIFLFRGRNYNYRTRPCFP--LMLWKPVA-- 175 Query: 757 PYIKSPLCGAPEGLTQEEADALREKGRSLPPLCNPGKNGKYYFLVDRIRNAFHECDLVRL 936 P + P GLT +EA +R +G LPP+C GKNG Y LV+++R AF CDLVR+ Sbjct: 176 PVYPRLVTKVPGGLTPDEATEMRTRGHQLPPICKLGKNGVYANLVNQVREAFEACDLVRV 235 Query: 937 DCRSLTSRDIVAMRIKLTLLVPCEVLSNEENYLLLWKTKASDSMELGTDTVNTEYVTEFS 1116 DC L D + KL LVPC +LS E ++L+W + SD N+ VT+ Sbjct: 236 DCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILMW--RGSDWKSSLPPLENSYEVTKVQ 293 Query: 1117 ETSS 1128 E+ S Sbjct: 294 ESFS 297 >ref|NP_001105220.1| CRS2-associated factor 1, chloroplastic precursor [Zea mays] gi|75147312|sp|Q84N49.1|CAF1P_MAIZE RecName: Full=CRS2-associated factor 1, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1; Flags: Precursor gi|30349367|gb|AAP22135.1| CRS2-associated factor 1 [Zea mays] Length = 674 Score = 178 bits (452), Expect = 7e-42 Identities = 102/244 (41%), Positives = 141/244 (57%) Frame = +1 Query: 397 SREAIHGKPLSKEEVKYLVHSREHAKPLFQIGREGFKPIMVFYAQRHWKRRENWVFKIKC 576 SRE I G+PL+KEEV LV +K +GR+G M+ HWKR+ V KIKC Sbjct: 176 SREDILGEPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKR--VCKIKC 233 Query: 577 MGIASLDMPGLCREIEEKTGGKIIHVDKVIVYVFRGRHYNCRIKPVFDNHLYLAQPQAKL 756 G+ ++DM +C ++EEK GGK+IH ++++FRGR+YN R +P F L L +P A Sbjct: 234 KGVCTIDMDNICHQLEEKVGGKVIHRQGGVIFLFRGRNYNYRTRPCFP--LMLWKPVA-- 289 Query: 757 PYIKSPLCGAPEGLTQEEADALREKGRSLPPLCNPGKNGKYYFLVDRIRNAFHECDLVRL 936 P + P GLT +EA +R +G LPP+C GKNG Y LV+++R AF CDLVR+ Sbjct: 290 PVYPRLVTKVPGGLTPDEATEMRTRGHQLPPICKLGKNGVYANLVNQVREAFEACDLVRV 349 Query: 937 DCRSLTSRDIVAMRIKLTLLVPCEVLSNEENYLLLWKTKASDSMELGTDTVNTEYVTEFS 1116 DC L D + KL LVPC +LS E ++L+W + SD N+ VT+ Sbjct: 350 DCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILMW--RGSDWKSSLPPLENSYEVTKVQ 407 Query: 1117 ETSS 1128 E+ S Sbjct: 408 ESFS 411 >ref|XP_002445773.1| hypothetical protein SORBIDRAFT_07g025550 [Sorghum bicolor] gi|241942123|gb|EES15268.1| hypothetical protein SORBIDRAFT_07g025550 [Sorghum bicolor] Length = 674 Score = 177 bits (449), Expect = 2e-41 Identities = 96/217 (44%), Positives = 131/217 (60%) Frame = +1 Query: 397 SREAIHGKPLSKEEVKYLVHSREHAKPLFQIGREGFKPIMVFYAQRHWKRRENWVFKIKC 576 SRE I G+PL+KEEV LV K +GR+G M+ HWKR+ V KIKC Sbjct: 176 SREDILGEPLTKEEVFELVKGSLKTKRQLNMGRDGLTHNMLENIHSHWKRKR--VCKIKC 233 Query: 577 MGIASLDMPGLCREIEEKTGGKIIHVDKVIVYVFRGRHYNCRIKPVFDNHLYLAQPQAKL 756 G+ ++DM +C+++EEK GGK+IH ++++FRGR+YN R +P F L L +P A Sbjct: 234 KGVCTVDMDNICQQLEEKVGGKVIHRQGGVIFLFRGRNYNYRTRPCFP--LMLWKPVA-- 289 Query: 757 PYIKSPLCGAPEGLTQEEADALREKGRSLPPLCNPGKNGKYYFLVDRIRNAFHECDLVRL 936 P + P GLT +EA +R +GR LPP+C GKNG Y LV ++R AF CDLVR+ Sbjct: 290 PVYPRLVTKVPGGLTPDEATEMRARGRQLPPICKLGKNGVYANLVKQVREAFEACDLVRV 349 Query: 937 DCRSLTSRDIVAMRIKLTLLVPCEVLSNEENYLLLWK 1047 DC L D + KL LVPC +LS E ++L+W+ Sbjct: 350 DCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILMWR 386 >ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Populus trichocarpa] gi|550312256|gb|ERP48370.1| hypothetical protein POPTR_0024s00430g [Populus trichocarpa] Length = 731 Score = 175 bits (443), Expect = 8e-41 Identities = 94/218 (43%), Positives = 135/218 (61%) Frame = +1 Query: 394 RSREAIHGKPLSKEEVKYLVHSREHAKPLFQIGREGFKPIMVFYAQRHWKRRENWVFKIK 573 ++RE I G PL++EE++ LV AK +GR+G M+ HWKRR V KIK Sbjct: 238 KTREEILGDPLTQEEIQELVDGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRRR--VCKIK 295 Query: 574 CMGIASLDMPGLCREIEEKTGGKIIHVDKVIVYVFRGRHYNCRIKPVFDNHLYLAQPQAK 753 C G+ ++DM +C+++EE+TGGKII+ ++Y+FRGR+YN R +P F L L +P Sbjct: 296 CKGVCTVDMDNVCQQLEERTGGKIIYRKGGVLYLFRGRNYNYRFRPRFP--LMLWKPVT- 352 Query: 754 LPYIKSPLCGAPEGLTQEEADALREKGRSLPPLCNPGKNGKYYFLVDRIRNAFHECDLVR 933 P + APEGLT +EA +R KGR L P+C GKNG Y LV +R AF EC+LVR Sbjct: 353 -PVYPRLIQRAPEGLTLQEASGMRNKGRKLIPICKLGKNGVYRDLVRNVREAFEECELVR 411 Query: 934 LDCRSLTSRDIVAMRIKLTLLVPCEVLSNEENYLLLWK 1047 ++C+ + D + KL LVPC ++S E ++L+W+ Sbjct: 412 INCQGMNGSDFRKIGAKLRDLVPCVLISFECEHILMWR 449 >ref|XP_002332503.1| predicted protein [Populus trichocarpa] Length = 699 Score = 175 bits (443), Expect = 8e-41 Identities = 94/218 (43%), Positives = 135/218 (61%) Frame = +1 Query: 394 RSREAIHGKPLSKEEVKYLVHSREHAKPLFQIGREGFKPIMVFYAQRHWKRRENWVFKIK 573 ++RE I G PL++EE++ LV AK +GR+G M+ HWKRR V KIK Sbjct: 238 KTREEILGDPLTQEEIQELVDGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRRR--VCKIK 295 Query: 574 CMGIASLDMPGLCREIEEKTGGKIIHVDKVIVYVFRGRHYNCRIKPVFDNHLYLAQPQAK 753 C G+ ++DM +C+++EE+TGGKII+ ++Y+FRGR+YN R +P F L L +P Sbjct: 296 CKGVCTVDMDNVCQQLEERTGGKIIYRKGGVLYLFRGRNYNYRFRPRFP--LMLWKPVT- 352 Query: 754 LPYIKSPLCGAPEGLTQEEADALREKGRSLPPLCNPGKNGKYYFLVDRIRNAFHECDLVR 933 P + APEGLT +EA +R KGR L P+C GKNG Y LV +R AF EC+LVR Sbjct: 353 -PVYPRLIQRAPEGLTLQEASGMRNKGRKLIPICKLGKNGVYRDLVRNVREAFEECELVR 411 Query: 934 LDCRSLTSRDIVAMRIKLTLLVPCEVLSNEENYLLLWK 1047 ++C+ + D + KL LVPC ++S E ++L+W+ Sbjct: 412 INCQGMNGSDFRKIGAKLRDLVPCVLISFECEHILMWR 449 >ref|XP_004984210.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like isoform X2 [Setaria italica] Length = 688 Score = 174 bits (442), Expect = 1e-40 Identities = 101/269 (37%), Positives = 149/269 (55%), Gaps = 8/269 (2%) Frame = +1 Query: 397 SREAIHGKPLSKEEVKYLVHSREHAKPLFQIGREGFKPIMVFYAQRHWKRRENWVFKIKC 576 SRE + G+PL+KEEV LV +GR+G M+ HWKR+ V KIKC Sbjct: 191 SREEVLGEPLTKEEVAELVKGSLKTNRQLNMGRDGLTHNMLENIHSHWKRKR--VCKIKC 248 Query: 577 MGIASLDMPGLCREIEEKTGGKIIHVDKVIVYVFRGRHYNCRIKPVFDNHLYLAQPQAKL 756 G+ ++DM +C+++EEK GGK+IH ++++FRGR+YN R +P F L L +P A Sbjct: 249 KGVCTVDMDNVCQQLEEKVGGKVIHRQGGVIFLFRGRNYNYRTRPSFP--LMLWKPVA-- 304 Query: 757 PYIKSPLCGAPEGLTQEEADALREKGRSLPPLCNPGKNGKYYFLVDRIRNAFHECDLVRL 936 P + P+GLT +EA +R +G LPP+C GKNG Y LV ++R AF CDLVR+ Sbjct: 305 PVYPRLVKKVPDGLTPDEAAEMRMRGNQLPPICRLGKNGVYVNLVKQVREAFEACDLVRV 364 Query: 937 DCRSLTSRDIVAMRIKLTLLVPCEVLSNEENYLLLWKTKASDSMELGTDTVNTEYV---- 1104 DC L D + KL LVPC +LS E ++L+W+ S + N E Sbjct: 365 DCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILMWRGSDWKSSLPPLEENNFEVTKADE 424 Query: 1105 ----TEFSETSSKNSTIMSDKDISFLLDS 1179 EF+E + T++++ +++ + S Sbjct: 425 HFSGEEFNEKVRHSGTVLTEIELASIATS 453 >gb|EMJ04984.1| hypothetical protein PRUPE_ppa001872mg [Prunus persica] Length = 750 Score = 174 bits (442), Expect = 1e-40 Identities = 117/319 (36%), Positives = 172/319 (53%), Gaps = 16/319 (5%) Frame = +1 Query: 319 PHYRMRVRLRPPEPATPKEVLHSDPR---SREAIHGKPLSKEEVKYLVHSREHAKPLFQI 489 PH + ++ P P P S P+ SR+ I G PL+ EEVK LV + + Sbjct: 223 PHKKGVKPVQSPGPYLPG----SGPKYVKSRDEILGDPLTPEEVKELVKGCIKTRRQLNM 278 Query: 490 GREGFKPIMVFYAQRHWKRRENWVFKIKCMGIASLDMPGLCREIEEKTGGKIIHVDKVIV 669 GR+GF M+ HWKRR V KIKC G+ ++DM +C +IEEKTGGKII+ ++ Sbjct: 279 GRDGFTHNMLDNIHAHWKRRR--VCKIKCKGVCTVDMDNVCEQIEEKTGGKIIYRKGGVI 336 Query: 670 YVFRGRHYNCRIKPVFDNHLYLAQPQAKLPYIKSPLCGAPEGLTQEEADALREKGRSLPP 849 Y+FRGR+YN + +P F L L +P P + APEGLT EEA +R+KGR+L P Sbjct: 337 YLFRGRNYNYKTRPQFP--LMLWRPIT--PVYPRLVQRAPEGLTLEEATEMRKKGRNLIP 392 Query: 850 LCNPGKNGKYYFLVDRIRNAFHECDLVRLDCRSLTSRDIVAMRIKLTLLVPCEVLSNEEN 1029 +C GKNG Y L R AF EC+LVR++C + D + KL LVPC ++S E Sbjct: 393 ICKLGKNGVYSELAKNAREAFEECELVRINCTGMNGSDYRKIGAKLKDLVPCVLISFELE 452 Query: 1030 YLLLWKTK---------ASDSMEL-GTDTVNTEYVT---EFSETSSKNSTIMSDKDISFL 1170 ++L+W+ + +D E+ G+D ++ + E E S+ ++ +S KD S Sbjct: 453 HILMWRGREWKSSIPYPENDLKEVKGSDVDDSTSIAPPLEGQEESTSCASTVSVKDASL- 511 Query: 1171 LDSKLEGDFVEYSSPSLAT 1227 + + S+PS+ + Sbjct: 512 -------EILNTSTPSIGS 523 >ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum lycopersicum] Length = 766 Score = 174 bits (441), Expect = 1e-40 Identities = 116/319 (36%), Positives = 176/319 (55%), Gaps = 6/319 (1%) Frame = +1 Query: 394 RSREAIHGKPLSKEEVKYLVHSREHAKPLFQIGREGFKPIMVFYAQRHWKRRENWVFKIK 573 +SRE + G+PL+KEE+ L++S + IGR+G M+ HWKR+ V KIK Sbjct: 242 KSREEVLGEPLTKEEMMELINSCKKTTRQMNIGRDGLTHNMLENIHAHWKRKR--VCKIK 299 Query: 574 CMGIASLDMPGLCREIEEKTGGKIIHVDKVIVYVFRGRHYNCRIKPVFDNHLYLAQPQAK 753 C G+ ++DM +C ++EEKTGGKII+ ++Y+FRGR+YN +P F L L +P Sbjct: 300 CKGVCTVDMDNVCEKLEEKTGGKIIYHKGGVIYLFRGRNYNYMTRPRFP--LMLWRPVT- 356 Query: 754 LPYIKSPLCGAPEGLTQEEADALREKGRSLPPLCNPGKNGKYYFLVDRIRNAFHECDLVR 933 P + PEGLT EEA +R+KGR+L P+C KNG Y LV +R AF C+LV Sbjct: 357 -PVYPRLVRRVPEGLTLEEATEMRKKGRNLIPICKLAKNGVYCDLVKNVREAFEACELVC 415 Query: 934 LDCRSLTSRDIVAMRIKLTLLVPCEVLSNEENYLLLWKTKASDSMELGTDTVNTEYVTEF 1113 ++C+ L D + KL LVPC ++S E+ ++L+W+ + S L D N E + E Sbjct: 416 INCQGLNPSDYRKIGAKLKDLVPCVLISFEQEHILIWRGRDWVS-SLPEDGDNPE-IREG 473 Query: 1114 SETSSKNSTIMSDKDISFLLDSKLEGDFVEYSSPSLATSSNDTFLTSGNF--IHDSVAES 1287 SE+ + +T ++ + + G S SL + +T+ S N + D AE Sbjct: 474 SESVNAANT---NRSFEVQVVASTAG------SSSLPVTEVNTYNLSANTFPLGDEDAEY 524 Query: 1288 LNEFG----QNESHYPSAS 1332 + + G ++E HYP +S Sbjct: 525 VRKDGTKEDRSEDHYPESS 543