BLASTX nr result

ID: Ephedra28_contig00017952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00017952
         (517 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24854.1| unknown [Picea sitchensis]                             122   5e-26
ref|XP_001764534.1| predicted protein [Physcomitrella patens] gi...    93   3e-17
ref|XP_006818261.1| PREDICTED: poly [ADP-ribose] polymerase 2-li...    58   2e-06
gb|ESO91624.1| hypothetical protein LOTGIDRAFT_163349 [Lottia gi...    57   3e-06

>gb|ABK24854.1| unknown [Picea sitchensis]
          Length = 452

 Score =  122 bits (306), Expect = 5e-26
 Identities = 56/114 (49%), Positives = 76/114 (66%)
 Frame = -2

Query: 351 WKWRSDNVKWIPYDDSTSRAIESAFSKGESSVEFSLDGGHHPSHFIIFMLQPFFQYNVKT 172
           W+W++D+++W  YD S + AIE+A ++GE SVE S+D G  P+  I F  Q   Q N++T
Sbjct: 48  WQWQTDDLRWRSYDASRTAAIEAAHARGEYSVEISVDQGSTPTCVIYFQNQDLRQVNLRT 107

Query: 171 KRQRTVRRHVTGQGSIPTWQWLEDEINHWHVYDQQLSSVFEAAWQQSATCQTGN 10
           +RQRTVRR+V G+GS   WQW E E N WH YD QL+S FE  W +S + Q  N
Sbjct: 108 QRQRTVRRYVNGKGSTAVWQWWESERNCWHRYDDQLASKFETGWLESRSSQRSN 161


>ref|XP_001764534.1| predicted protein [Physcomitrella patens]
           gi|162684398|gb|EDQ70801.1| predicted protein
           [Physcomitrella patens]
          Length = 412

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 44/108 (40%), Positives = 60/108 (55%)
 Frame = -2

Query: 357 AVWKWRSDNVKWIPYDDSTSRAIESAFSKGESSVEFSLDGGHHPSHFIIFMLQPFFQYNV 178
           AVW+W +D + W PY+   S +IE++F   + S++  +     P+H I F   P  Q N 
Sbjct: 2   AVWEWLTDAMLWKPYNSVLSDSIEASFQVQQPSLDVCITSPSAPTHSITFQSIPPCQINR 61

Query: 177 KTKRQRTVRRHVTGQGSIPTWQWLEDEINHWHVYDQQLSSVFEAAWQQ 34
            T++ R VRR+V  Q  I  WQW EDE   WH YD  +SS  E AW Q
Sbjct: 62  NTQQSRPVRRNVDAQSGIAEWQWWEDESQRWHAYDVLISSQIEIAWGQ 109


>ref|XP_006818261.1| PREDICTED: poly [ADP-ribose] polymerase 2-like [Saccoglossus
           kowalevskii]
          Length = 715

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/103 (30%), Positives = 51/103 (49%)
 Frame = -2

Query: 351 WKWRSDNVKWIPYDDSTSRAIESAFSKGESSVEFSLDGGHHPSHFIIFMLQPFFQYNVKT 172
           W+W  D  KW  YD+   + I   F + ++ +EF +     P+ F + +L    Q N KT
Sbjct: 29  WEWEGDAGKWTAYDEDQIKEINDTFDEDKNKIEFIVG----PTKFNV-LLDKMVQKNAKT 83

Query: 171 KRQRTVRRHVTGQGSIPTWQWLEDEINHWHVYDQQLSSVFEAA 43
             +R +R  +        WQW +DE N W+ Y+ + + V EA+
Sbjct: 84  GWERRLRCLIKDDNDYFVWQW-QDEKNKWNPYNVKNTVVIEAS 125


>gb|ESO91624.1| hypothetical protein LOTGIDRAFT_163349 [Lottia gigantea]
          Length = 413

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
 Frame = -2

Query: 354 VWKWRSDNVKWIPYDDSTSRAIESAFSKGESSVEFSLDGGHHP--SHFIIFMLQPFFQYN 181
           VW+W  +N  W PY+      IE  + KG S+      G  +P  S + +F     +Q  
Sbjct: 22  VWEWFENNGSWQPYESDVVAFIEDNYLKGASAANL---GKINPNLSLYNVFFSSTIYQIR 78

Query: 180 VKTKRQRTVRRHVTGQGSIP----TWQWLEDEINHWHVYDQQLSSVFEAAWQQSAT 25
           + T  +R VRR +    S      TWQW  D I  W+ Y   ++S+ E+ +    T
Sbjct: 79  LDTGNRRHVRRKIYQMTSPDLNKITWQWAGDYIGQWNSYSFDVASMIESVYAGQQT 134


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