BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00017901
         (451 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK21010.1| unknown [Picea sitchensis] gi|148908581|gb|ABR174...    57   2e-06
ref|XP_004294935.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    55   7e-06

>gb|ABK21010.1| unknown [Picea sitchensis] gi|148908581|gb|ABR17400.1| unknown
           [Picea sitchensis]
          Length = 325

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
 Frame = +1

Query: 94  DFWCHACSQVIVPNFGADMCCPRCNGGFIEQID---APEREPEDPTPEIDPRMLALFASG 264
           ++WCH C Q IVP  G ++ CPRCN  F+E+++   A + +P     +  PR   L    
Sbjct: 8   EYWCHKCRQTIVPLIGEEVSCPRCNDCFVEEMESGRAQQAQPHSGGSDSTPRATIL---- 63

Query: 265 GLRRNRDETASGDAHPSP----------ARLPFLEILQALANASIRSENAGEQGAXXXXX 414
                     SG+A P P           R P   +LQ L     R+  +G  GA     
Sbjct: 64  -------SEVSGEAAPEPQDRRPALFVVERSPIFHLLQPLGATVARNRVSG--GA----- 109

Query: 415 XRIIVVDP 438
            R++V++P
Sbjct: 110 ERVLVMNP 117


>ref|XP_004294935.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
           [Fragaria vesca subsp. vesca]
           gi|470117588|ref|XP_004294936.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like isoform 2 [Fragaria
           vesca subsp. vesca] gi|470117590|ref|XP_004294937.1|
           PREDICTED: E3 ubiquitin-protein ligase RING1-like
           isoform 3 [Fragaria vesca subsp. vesca]
          Length = 375

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
 Frame = +1

Query: 85  IVMDFWCHACSQVIVPNFGADMCCPRCNGGFIEQIDAPEREPEDPTPEIDP-RMLALFA 258
           I   +WCH CSQ++ P  G +M CP C  GFIE++D   R+  +   E  P R L+L+A
Sbjct: 5   IAARYWCHMCSQMVNPIMGEEMKCPFCQSGFIEEMDGTPRDNPEADSEFGPDRPLSLWA 63