BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00017889
         (1009 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containi...   113   1e-22
ref|XP_004246707.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-22
gb|EOY07712.1| Tetratricopeptide repeat (TPR)-like superfamily p...   112   2e-22
ref|XP_004167767.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   112   3e-22
ref|XP_006367266.1| PREDICTED: pentatricopeptide repeat-containi...   110   7e-22
ref|XP_002525196.1| pentatricopeptide repeat-containing protein,...   110   9e-22
ref|XP_006828302.1| hypothetical protein AMTR_s00023p00232870 [A...   110   1e-21
ref|XP_006381507.1| pentatricopeptide repeat-containing family p...   107   1e-20
ref|XP_002326162.1| predicted protein [Populus trichocarpa]           107   1e-20
ref|XP_002965952.1| hypothetical protein SELMODRAFT_84012 [Selag...   106   2e-20
ref|XP_002968383.1| hypothetical protein SELMODRAFT_169661 [Sela...   106   2e-20
gb|EXB84820.1| hypothetical protein L484_003853 [Morus notabilis]     102   3e-19
ref|XP_006428907.1| hypothetical protein CICLE_v10011055mg [Citr...   101   4e-19
ref|XP_002334200.1| predicted protein [Populus trichocarpa]           101   5e-19
ref|XP_004305248.1| PREDICTED: pentatricopeptide repeat-containi...    99   2e-18
ref|XP_006398740.1| hypothetical protein EUTSA_v10012661mg [Eutr...    99   3e-18
ref|XP_006398739.1| hypothetical protein EUTSA_v10012661mg [Eutr...    99   3e-18
ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containi...    99   3e-18
gb|EMJ09280.1| hypothetical protein PRUPE_ppa001520mg [Prunus pe...    97   1e-17
ref|XP_004493936.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-17

>ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  113 bits (282), Expect = 1e-22
 Identities = 91/307 (29%), Positives = 140/307 (45%), Gaps = 2/307 (0%)
 Frame = +1

Query: 94   CCSPLPPQTKTSNTNNDHDKKFINSARTTKLSTSTNNESSIKATTSPPKVPLASEKRLWV 273
            C +P    +  S T          S R +  +  ++ E  I   +S  ++P+  +    V
Sbjct: 25   CKAPKSSLSNLSPTGTHLPFSSHTSTRHSPPALLSSVELDIAGASSGGRIPI--QHYAGV 82

Query: 274  AKNLMKQGNLMDCLSLMREVSEKG-RVCVLG-LLDLEDLKGCIGVHIENGDVGLVVDGLR 447
            A  L + G L D   ++  V   G      G +L +E +   I   +  G V  VV  LR
Sbjct: 83   ASKLAEGGKLEDFAMVVESVVVAGVEPSQFGAMLAVELVAKGISRCLREGKVWSVVQVLR 142

Query: 448  ILNEMGFHGPSLLDERALAMLGLELSKMVKKDSLGVKECVEGLQVLEYCQFHTQELVEPM 627
             + E+G     L DE A+  L  +  +M K   L  +E VE ++VL    F  +E+++P 
Sbjct: 143  KVEELGISVLELCDEPAVESLRRDCRRMAKSGEL--EELVELMEVLSGFGFSVREMMKPS 200

Query: 628  LVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIREFGRKGDLSSALIVFRKYQSCNTT 807
             V K                              I EFG+K DL SA I + + ++    
Sbjct: 201  EVIKLCVDYRNPKMAIRYASILPHADILFCTT--INEFGKKRDLKSAYIAYTESKANMNG 258

Query: 808  PNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNVLPSTFVYNSFMNAVAADLNRTLQTFH 987
             NMY+YR IID CG CGD   +  I++++++ NV+P+ FV+NS MN  A DLN T Q + 
Sbjct: 259  SNMYIYRTIIDVCGLCGDYKKSRNIYQDLVNQNVIPNIFVFNSLMNVNAHDLNYTFQLYK 318

Query: 988  DMQSSGV 1008
            +MQ+ GV
Sbjct: 319  NMQNLGV 325


>ref|XP_004246707.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic-like [Solanum lycopersicum]
          Length = 857

 Score =  112 bits (281), Expect = 2e-22
 Identities = 90/332 (27%), Positives = 145/332 (43%), Gaps = 19/332 (5%)
 Frame = +1

Query: 70   MRALLVVTCCSPLPPQTKTSNTNNDHDKKFINSARTTKLSTSTNNESSIKATTSPPKVPL 249
            MR  LV+   S +     +S T   H + +  +    K    T++ S   ++ + P+ PL
Sbjct: 1    MREALVILPSSSITLPPNSSPTPPPHHRHYRRTTAKPKRKP-THSPSHFTSSITTPQSPL 59

Query: 250  ASEKRLW-----------------VAKNLMKQGNLMDCLSLMREVSEKGRVC--VLGLLD 372
             S  R W                 +A  L + G   D L +   V   G        LL+
Sbjct: 60   LSSLR-WDSASASGSCNGLKYYAELASKLAQDGRFDDSLMIAESVVVSGVNAEEFTALLN 118

Query: 373  LEDLKGCIGVHIENGDVGLVVDGLRILNEMGFHGPSLLDERALAMLGLELSKMVKKDSLG 552
            ++ + G I   +E   VG VV+ L    ++G     LLDE ++  L  E  + ++     
Sbjct: 119  VKLVSGGIVRLLEERKVGSVVELLNGAQQLGIDPSKLLDEDSINALSRECRRTMQCSE-- 176

Query: 553  VKECVEGLQVLEYCQFHTQELVEPMLVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLI 732
            ++E V  ++ L  C    ++LV+P  + +                             +I
Sbjct: 177  IEEVVSLMETLRGCGMPIKDLVKPSEILRLCVSQRKPNAAVRYAHIFPHVDIMFCT--II 234

Query: 733  REFGRKGDLSSALIVFRKYQSCNTTPNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNVL 912
             EFG+KGDL+SAL VF   +    TPN+Y+YR  ID CG CGD   + +I++ +++    
Sbjct: 235  LEFGKKGDLASALTVFEASKQNQDTPNLYIYRTAIDVCGLCGDYLKSRSIYEGLIASKFT 294

Query: 913  PSTFVYNSFMNAVAADLNRTLQTFHDMQSSGV 1008
            P+ +V+NS MN  A DL+ TL  +  MQ  GV
Sbjct: 295  PNIYVFNSLMNVNACDLSYTLDIYKQMQKLGV 326


>gb|EOY07712.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao]
          Length = 858

 Score =  112 bits (280), Expect = 2e-22
 Identities = 72/248 (29%), Positives = 122/248 (49%), Gaps = 2/248 (0%)
 Frame = +1

Query: 271  VAKNLMKQGNLMDCLSLMREVSEKGRVC--VLGLLDLEDLKGCIGVHIENGDVGLVVDGL 444
            +A  L + G L D   ++  +   G     ++ +L ++ +   +  +++ G V  VV+ L
Sbjct: 89   LASKLAEDGRLEDFAMIVEMLVASGVNAPRIVSMLSVQFVSKGVASNVQEGKVKSVVEVL 148

Query: 445  RILNEMGFHGPSLLDERALAMLGLELSKMVKKDSLGVKECVEGLQVLEYCQFHTQELVEP 624
            + + ++G     L+D   L  +  E  ++V      V++ V+ L+ L   QF  +ELV+P
Sbjct: 149  KKVEKLGIAPSKLVDGFGLVSMKREFQRIVGSGE--VEQAVDLLEALRGFQFTIKELVDP 206

Query: 625  MLVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIREFGRKGDLSSALIVFRKYQSCNT 804
              + K                             +I EFG+K DL+SAL  +   +   +
Sbjct: 207  SYIIKVCVDKRNPNLAVRYACLLPHAKILFCS--IISEFGKKRDLASALTAYEASKKNLS 264

Query: 805  TPNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNVLPSTFVYNSFMNAVAADLNRTLQTF 984
             PNMYLYR IIDACG CGD   +  I++++++  V P+ +V+NS MN  A DL  TL  +
Sbjct: 265  GPNMYLYRAIIDACGLCGDYLKSRNIYEDLVNQRVTPNIYVFNSLMNVNAHDLGYTLDVY 324

Query: 985  HDMQSSGV 1008
             DMQ+ G+
Sbjct: 325  KDMQNLGI 332


>ref|XP_004167767.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At5g02830, chloroplastic-like [Cucumis sativus]
          Length = 855

 Score =  112 bits (279), Expect = 3e-22
 Identities = 91/307 (29%), Positives = 139/307 (45%), Gaps = 2/307 (0%)
 Frame = +1

Query: 94   CCSPLPPQTKTSNTNNDHDKKFINSARTTKLSTSTNNESSIKATTSPPKVPLASEKRLWV 273
            C +P    +  S T          S R +  +  ++ E  I   +S  ++P+  +    V
Sbjct: 25   CKAPKSSLSNLSPTGTHLPFSSHTSTRHSPPALLSSVELDIAGASSGGRIPI--QHYAGV 82

Query: 274  AKNLMKQGNLMDCLSLMREVSEKG-RVCVLG-LLDLEDLKGCIGVHIENGDVGLVVDGLR 447
            A  L + G L D   ++  V   G      G +L +E +   I   +  G V  VV  LR
Sbjct: 83   ASKLAEGGKLEDFAMVVESVVVAGVEPSQFGAMLAVELVAKGISRCLREGKVWSVVQVLR 142

Query: 448  ILNEMGFHGPSLLDERALAMLGLELSKMVKKDSLGVKECVEGLQVLEYCQFHTQELVEPM 627
             + E+G     L DE A+  L  +  +M K   L  +E VE ++VL    F  +E+++P 
Sbjct: 143  KVEELGISVLELCDEPAVESLRRDCRRMAKSGEL--EELVELMEVLSGFGFSVREMMKPS 200

Query: 628  LVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIREFGRKGDLSSALIVFRKYQSCNTT 807
             V K                              I EFG+K DL SA I + + ++    
Sbjct: 201  EVIKLCVDYRNPKMAIRYASILPHADILFCTT--INEFGKKRDLKSAYIAYTESKANMNG 258

Query: 808  PNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNVLPSTFVYNSFMNAVAADLNRTLQTFH 987
             NMY+YR IID CG CGD   +  I++++++ NV P+ FV+NS MN  A DLN T Q + 
Sbjct: 259  SNMYIYRTIIDVCGLCGDYKKSRNIYQDLVNQNVTPNIFVFNSLMNVNAHDLNYTFQLYK 318

Query: 988  DMQSSGV 1008
            +MQ+ GV
Sbjct: 319  NMQNLGV 325


>ref|XP_006367266.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic-like [Solanum tuberosum]
          Length = 859

 Score =  110 bits (276), Expect = 7e-22
 Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 17/330 (5%)
 Frame = +1

Query: 70   MRALLVVTCCSPLPPQTKTSNTNNDHDKKFINSARTTKLSTSTNNESSIKATTSPPKVPL 249
            MR  LV+   S +     +S T   H +++  +    K    T++ S   ++ + P+ PL
Sbjct: 1    MREALVILPSSSITLPPNSSPTPPPHHRRYRRTTAKPKRKP-THSPSHFTSSITTPQSPL 59

Query: 250  ASEKRLW---------------VAKNLMKQGNLMDCLSLMREVSEKGRVCV--LGLLDLE 378
             S  R W               +A  L + G   D L +   V   G        LL+++
Sbjct: 60   LSTLR-WDSASGSCNGLKYYAELASKLAQDGRFDDSLMIAESVVVSGVNAAEFAALLNVK 118

Query: 379  DLKGCIGVHIENGDVGLVVDGLRILNEMGFHGPSLLDERALAMLGLELSKMVKKDSLGVK 558
             + G I   +E   VG VV+ L    ++G     LLD  AL  L  E  + +      ++
Sbjct: 119  LVSGGIVRLLEERKVGSVVELLNGAQQLGIDPLKLLDGDALNALSRECRRTMGCGE--IE 176

Query: 559  ECVEGLQVLEYCQFHTQELVEPMLVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIRE 738
            E V  ++ L+ C    ++LV+P  + +                             +I E
Sbjct: 177  EVVSLMETLKGCGMPIKDLVKPSEILRLCVSQRKPNAAVRYAHIFPHVDIMFCT--IILE 234

Query: 739  FGRKGDLSSALIVFRKYQSCNTTPNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNVLPS 918
            FG+KGDL SAL VF   +    TPN+Y+YR  ID CG CGD   + +I++ +++    P+
Sbjct: 235  FGKKGDLVSALTVFEASKQNQDTPNLYIYRTAIDVCGLCGDYLKSRSIYEGLIASKFTPN 294

Query: 919  TFVYNSFMNAVAADLNRTLQTFHDMQSSGV 1008
             +V+NS MN  A DL+ TL  +  MQ  GV
Sbjct: 295  IYVFNSLMNVNACDLSYTLDIYKQMQKLGV 324


>ref|XP_002525196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535493|gb|EEF37162.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 786

 Score =  110 bits (275), Expect = 9e-22
 Identities = 66/205 (32%), Positives = 102/205 (49%)
 Frame = +1

Query: 394  IGVHIENGDVGLVVDGLRILNEMGFHGPSLLDERALAMLGLELSKMVKKDSLGVKECVEG 573
            I  ++   +V  VVD L   +++G     L D  ++ +L  E  ++V    L  ++ +  
Sbjct: 53   ISKNLRERNVDSVVDALNTADQLGLPPSQLFDAASMDLLKTECLRIVNFGRL--EDIILL 110

Query: 574  LQVLEYCQFHTQELVEPMLVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIREFGRKG 753
            ++ L    F  +ELVEP  V K                             ++++FG+KG
Sbjct: 111  METLAGYSFSIKELVEPSRVIKLCVHQRNPHLAVRYARLFPHEGILMCS--IVKQFGKKG 168

Query: 754  DLSSALIVFRKYQSCNTTPNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNVLPSTFVYN 933
            DL SAL  +  Y   +T P+MYLYR +ID CG CGD   +  IF++++S  V+P+ FV+N
Sbjct: 169  DLDSALAAYEAYMQHSTVPDMYLYRALIDVCGLCGDYMQSRYIFEDIVSQKVIPNIFVFN 228

Query: 934  SFMNAVAADLNRTLQTFHDMQSSGV 1008
            S MN  A DL  TL  +  MQ+ GV
Sbjct: 229  SLMNVNAHDLGYTLHVYKKMQNLGV 253


>ref|XP_006828302.1| hypothetical protein AMTR_s00023p00232870 [Amborella trichopoda]
            gi|548832949|gb|ERM95718.1| hypothetical protein
            AMTR_s00023p00232870 [Amborella trichopoda]
          Length = 855

 Score =  110 bits (274), Expect = 1e-21
 Identities = 85/331 (25%), Positives = 149/331 (45%), Gaps = 18/331 (5%)
 Frame = +1

Query: 70   MRALLVVTCCSPLPPQTKTSNTNNDHDKKFINSARTTKLSTSTNNESSIKATTSPPKVPL 249
            MR LL+ +  SP+PP +  +  N     + I +  T      T    S+K  +S    PL
Sbjct: 1    MRDLLMASSSSPIPPNSSLTLNN-----RLIRTFPTKTPQNPTKTTLSLKYLSS---TPL 52

Query: 250  ASEKRLWVAKNLMKQGNLMDCLSLMREVSEKGRVCVLGLL------------------DL 375
             S+ R  +   L    +L    S+  +++E GR+    +L                   +
Sbjct: 53   LSDIRPDLG--LQNPSSLKFYASMASKLAENGRLDEFSMLAESFIGSGMAPGHFVEALSI 110

Query: 376  EDLKGCIGVHIENGDVGLVVDGLRILNEMGFHGPSLLDERALAMLGLELSKMVKKDSLGV 555
            + +     + ++NG+   V+  +   +++G     + D  A  +L     +++  D++G 
Sbjct: 111  KHVSAGFALCLKNGEFDTVLGVMEKFDKLGICPSLIFDGSARRLLLSACRRVLDGDNIG- 169

Query: 556  KECVEGLQVLEYCQFHTQELVEPMLVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIR 735
             E V  +++    +F  +++V+P  + +                             LI 
Sbjct: 170  -EFVRLVEIFAGYRFSVKDVVKPTFILQACIDRHDPFMAGRYASILPHADVWFNF--LIC 226

Query: 736  EFGRKGDLSSALIVFRKYQSCNTTPNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNVLP 915
            EFG+K DL SAL+ F   +  + +PNMY+YR IIDACG CGDS  + +IF+++L   + P
Sbjct: 227  EFGKKKDLQSALVAFEVSKGKSVSPNMYIYRSIIDACGYCGDSLKSRSIFEDLLVQKITP 286

Query: 916  STFVYNSFMNAVAADLNRTLQTFHDMQSSGV 1008
            +TFV+NS MN  A D +  L  +  M+  GV
Sbjct: 287  NTFVFNSLMNVNAHDSHYALHIYKQMKKLGV 317


>ref|XP_006381507.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550336211|gb|ERP59304.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 828

 Score =  107 bits (266), Expect = 1e-20
 Identities = 86/325 (26%), Positives = 144/325 (44%), Gaps = 12/325 (3%)
 Frame = +1

Query: 70   MRALLVVTCCSPLPPQTKTSNTNNDHDKKFINSARTTKLSTSTNNESSIKATTSP--PKV 243
            M+ LL++   +  PP T  S+T + H        +T  L   +    ++ + + P    +
Sbjct: 1    MKQLLILGSSTVTPP-TNPSSTPHHHHHSPKPKPKTPSLHAPSKPIPAVHSRSPPLLSTI 59

Query: 244  PLAS--------EKRLWVAKNLMKQGNLMDCLSLMREVSEKG--RVCVLGLLDLEDLKGC 393
            P           +    +A  L + G L D + +   V   G      +  L +  +   
Sbjct: 60   PFRQNHNSSSLLDYHANLASKLAEDGRLQDFVMIAESVIASGVEPSSFVAALSVGPVAKG 119

Query: 394  IGVHIENGDVGLVVDGLRILNEMGFHGPSLLDERALAMLGLELSKMVKKDSLGVKECVEG 573
            I  +++ G+V  VV  L+   E+G      LD  A+ +L  E  ++V      V++ V  
Sbjct: 120  ISKNLQQGNVDCVVRFLKKTEELGVSTLKFLDGVAIDLLKKEFIRIVNCGD--VEQVVYI 177

Query: 574  LQVLEYCQFHTQELVEPMLVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIREFGRKG 753
            ++ L    F  +ELV+P  + K                             +I EFGRKG
Sbjct: 178  METLAGFCFSFKELVDPSYIIKICVDKLNPKMAVRYAAIFPGEGRILFCN-IISEFGRKG 236

Query: 754  DLSSALIVFRKYQSCNTTPNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNVLPSTFVYN 933
             L SAL+ + + +   + PNMYL+R IID CG CGD   +  I++++++  V+P+ +V+N
Sbjct: 237  HLDSALVAYDEAKHKLSVPNMYLHRTIIDVCGLCGDYMKSRYIYEDLINRKVIPNVYVFN 296

Query: 934  SFMNAVAADLNRTLQTFHDMQSSGV 1008
            S MN  A DL  T   F +MQ+ GV
Sbjct: 297  SLMNVNAHDLGYTFSVFKNMQNLGV 321


>ref|XP_002326162.1| predicted protein [Populus trichocarpa]
          Length = 828

 Score =  107 bits (266), Expect = 1e-20
 Identities = 86/325 (26%), Positives = 144/325 (44%), Gaps = 12/325 (3%)
 Frame = +1

Query: 70   MRALLVVTCCSPLPPQTKTSNTNNDHDKKFINSARTTKLSTSTNNESSIKATTSP--PKV 243
            M+ LL++   +  PP T  S+T + H        +T  L   +    ++ + + P    +
Sbjct: 1    MKQLLILGSSTVTPP-TNPSSTPHHHHHSPKPKPKTPSLHAPSKPIPAVHSRSPPLLSTI 59

Query: 244  PLAS--------EKRLWVAKNLMKQGNLMDCLSLMREVSEKG--RVCVLGLLDLEDLKGC 393
            P           +    +A  L + G L D + +   V   G      +  L +  +   
Sbjct: 60   PFRQNHNSSSLLDYHANLASKLAEDGRLQDFVMIAESVIASGVEPSSFVAALSVGPVAKG 119

Query: 394  IGVHIENGDVGLVVDGLRILNEMGFHGPSLLDERALAMLGLELSKMVKKDSLGVKECVEG 573
            I  +++ G+V  VV  L+   E+G      LD  A+ +L  E  ++V      V++ V  
Sbjct: 120  ISKNLQQGNVDCVVRFLKKTEELGVSTLKFLDGVAIDLLKKEFIRIVNCGD--VEQVVYI 177

Query: 574  LQVLEYCQFHTQELVEPMLVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIREFGRKG 753
            ++ L    F  +ELV+P  + K                             +I EFGRKG
Sbjct: 178  METLAGFCFSFKELVDPSYIIKICVDKLNPKMAVRYAAIFPGEGRILFCN-IISEFGRKG 236

Query: 754  DLSSALIVFRKYQSCNTTPNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNVLPSTFVYN 933
             L SAL+ + + +   + PNMYL+R IID CG CGD   +  I++++++  V+P+ +V+N
Sbjct: 237  HLDSALVAYDEAKHKLSVPNMYLHRTIIDVCGLCGDYMKSRYIYEDLINRKVIPNVYVFN 296

Query: 934  SFMNAVAADLNRTLQTFHDMQSSGV 1008
            S MN  A DL  T   F +MQ+ GV
Sbjct: 297  SLMNVNAHDLGYTFSVFKNMQNLGV 321


>ref|XP_002965952.1| hypothetical protein SELMODRAFT_84012 [Selaginella moellendorffii]
            gi|300166766|gb|EFJ33372.1| hypothetical protein
            SELMODRAFT_84012 [Selaginella moellendorffii]
          Length = 533

 Score =  106 bits (264), Expect = 2e-20
 Identities = 79/273 (28%), Positives = 131/273 (47%), Gaps = 10/273 (3%)
 Frame = +1

Query: 220  ATTSPPKVPLASEKRLWV--AKNLMKQGNLMDCLSLMREVSEKGRVC-------VLGLLD 372
            A       P A+    +V  AK L ++G L++ + L++E  E G V        V+G+  
Sbjct: 11   AANPAASAPAATSNLFYVGEAKRLARRGRLIEMIGLVQERLEHGAVGDARAFLEVVGIHA 70

Query: 373  LEDLKGCIGVHIENGDVGLVVDGLRILNEMGFHGPS-LLDERALAMLGLELSKMVKKDSL 549
            + D  GC+ V +E   +  VV+  R L+E+G   PS  L    L ++  E  ++++++  
Sbjct: 71   VRD--GCVSV-LEQRRLPYVVEFCRALSELGISSPSDYLGRYGLQLVIDECGRLLQENR- 126

Query: 550  GVKECVEGLQVLEYCQFHTQELVEPMLVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 729
             V+EC+  L+ L  C F  + LV+P L  +                             +
Sbjct: 127  -VEECIRCLERLAKCGFVVKNLVKPTLCMEACARMHNTALALRYACLLPDILQSCNM--I 183

Query: 730  IREFGRKGDLSSALIVFRKYQSCNTTPNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNV 909
            +++F  +GDL S   VF+  +S    P+MY Y  +IDACG CGD+  A  IF+ +L    
Sbjct: 184  MQKFRDQGDLQSVFQVFQALESTGVRPDMYSYCILIDACGRCGDAEKATAIFEGLLKAGT 243

Query: 910  LPSTFVYNSFMNAVAADLNRTLQTFHDMQSSGV 1008
            + + +V NS MNA A ++   L+ +  MQ SG+
Sbjct: 244  VLNVYVCNSMMNAHAGNIQHVLRLYRQMQGSGI 276


>ref|XP_002968383.1| hypothetical protein SELMODRAFT_169661 [Selaginella moellendorffii]
            gi|300164027|gb|EFJ30637.1| hypothetical protein
            SELMODRAFT_169661 [Selaginella moellendorffii]
          Length = 532

 Score =  106 bits (264), Expect = 2e-20
 Identities = 79/273 (28%), Positives = 131/273 (47%), Gaps = 10/273 (3%)
 Frame = +1

Query: 220  ATTSPPKVPLASEKRLWV--AKNLMKQGNLMDCLSLMREVSEKGRVC-------VLGLLD 372
            A       P A+    +V  AK L ++G L++ + L++E  E G V        V+G+  
Sbjct: 11   AANPAASAPAATSNLFYVGEAKRLARRGRLIEMIGLVQERLEHGAVGDARAFLEVVGIHA 70

Query: 373  LEDLKGCIGVHIENGDVGLVVDGLRILNEMGFHGPS-LLDERALAMLGLELSKMVKKDSL 549
            + D  GC+ V +E   +  +V+  R L+EMG   PS  L    L ++  E  ++++++  
Sbjct: 71   VRD--GCVSV-LEQRRLPYLVEFCRALSEMGISSPSDYLGRYGLQLVIDECGRLLQENR- 126

Query: 550  GVKECVEGLQVLEYCQFHTQELVEPMLVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 729
             V+EC+  L+ L  C F  + LV+P L  +                             +
Sbjct: 127  -VEECIRCLERLAKCGFVVKNLVKPTLCMEACARMHNTALALRYACLLPDILHSCNM--I 183

Query: 730  IREFGRKGDLSSALIVFRKYQSCNTTPNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNV 909
            +++F  +GDL S   VF+  +S    P+MY Y  +IDACG CGD+  A  IF+ +L    
Sbjct: 184  MQKFRDQGDLQSVFQVFQALESTGVLPDMYSYCILIDACGRCGDTEKATAIFEGLLKAGT 243

Query: 910  LPSTFVYNSFMNAVAADLNRTLQTFHDMQSSGV 1008
            + + +V NS MNA A ++   L+ +  MQ SG+
Sbjct: 244  VLNVYVCNSMMNAHAGNIQHVLRLYRQMQGSGI 276


>gb|EXB84820.1| hypothetical protein L484_003853 [Morus notabilis]
          Length = 822

 Score =  102 bits (253), Expect = 3e-19
 Identities = 68/205 (33%), Positives = 101/205 (49%)
 Frame = +1

Query: 394  IGVHIENGDVGLVVDGLRILNEMGFHGPSLLDERALAMLGLELSKMVKKDSLGVKECVEG 573
            I   + +G V      L  L+E+GF    + D  AL ++  E  ++++ +   V+E VE 
Sbjct: 100  ISAVLRDGKVRSFARLLGKLDELGFPPVEIFDGWALELIRRECRRILRCEQ--VEELVEL 157

Query: 574  LQVLEYCQFHTQELVEPMLVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIREFGRKG 753
             +VL    F  +ELV+P  V K                              + EFG+KG
Sbjct: 158  FEVLSGYGFSIKELVKPSDVIKICVEKRNPKMAIRYACTLPHAHIIFCDA--VYEFGKKG 215

Query: 754  DLSSALIVFRKYQSCNTTPNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNVLPSTFVYN 933
            DL SALI     +  +T+ NMYLYR IID CG C D   +  I++++L+  V P+ +V+N
Sbjct: 216  DLVSALIAHEASKKNSTSTNMYLYRTIIDVCGRCHDYQKSRYIYEDLLNEKVTPNVYVFN 275

Query: 934  SFMNAVAADLNRTLQTFHDMQSSGV 1008
            S MN  A D + TL  + DMQ+ GV
Sbjct: 276  SLMNVNAHDFSYTLNVYKDMQNLGV 300


>ref|XP_006428907.1| hypothetical protein CICLE_v10011055mg [Citrus clementina]
            gi|568853887|ref|XP_006480569.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic-like [Citrus sinensis]
            gi|557530964|gb|ESR42147.1| hypothetical protein
            CICLE_v10011055mg [Citrus clementina]
          Length = 850

 Score =  101 bits (252), Expect = 4e-19
 Identities = 90/306 (29%), Positives = 136/306 (44%), Gaps = 8/306 (2%)
 Frame = +1

Query: 115  QTKTSNTNNDHDK----KFINSARTTKLSTSTNNESSIKATTSPPKVPLASEKRLW--VA 276
            QT+  N  N  +K    K    A ++ LS+     SS  A  S  +  L+S    +  +A
Sbjct: 19   QTRLYNHRNKPNKHPVTKLFPLASSSSLSSIPTVHSSQTALLSTVRRDLSSRNDYYADMA 78

Query: 277  KNLMKQGNLMDCLSLMREV--SEKGRVCVLGLLDLEDLKGCIGVHIENGDVGLVVDGLRI 450
              L K G L +   ++  V  SE        +L LE +   I   I  G +  VV  L+ 
Sbjct: 79   SKLAKDGRLEEFAMIVESVVVSEGNVSKFASMLSLEMVASGIVKSIGEGRIDCVVGVLKK 138

Query: 451  LNEMGFHGPSLLDERALAMLGLELSKMVKKDSLGVKECVEGLQVLEYCQFHTQELVEPML 630
            LNE+G     L       +L  E  +++  DS  V+  V  ++VLE  +   +EL E   
Sbjct: 139  LNELGVAPLELFHGSGFKLLKNECQRLL--DSGEVEMFVGLMEVLEEFRLPVKELDEEFR 196

Query: 631  VFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIREFGRKGDLSSALIVFRKYQSCNTTP 810
            + +                              +REFG+K DL SAL  +   +   ++P
Sbjct: 197  IVQLCVNKPDVNLAIRYACIVPRADILFCN--FVREFGKKRDLVSALRAYEASKKHLSSP 254

Query: 811  NMYLYRDIIDACGSCGDSTMAETIFKEMLSHNVLPSTFVYNSFMNAVAADLNRTLQTFHD 990
            NMY+ R IID CG CGD   +  I++++ S NV  + +V+NS MN  A DL  TL+ + +
Sbjct: 255  NMYICRTIIDVCGLCGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVNAHDLKFTLEVYKN 314

Query: 991  MQSSGV 1008
            MQ  GV
Sbjct: 315  MQKLGV 320


>ref|XP_002334200.1| predicted protein [Populus trichocarpa]
          Length = 317

 Score =  101 bits (251), Expect = 5e-19
 Identities = 83/321 (25%), Positives = 141/321 (43%), Gaps = 12/321 (3%)
 Frame = +1

Query: 70  MRALLVVTCCSPLPPQTKTSNTNNDHDKKFINSARTTKLSTSTNNESSIKATTSP--PKV 243
           M+ LL++   +  PP T  S+T + H        +T  L   +    ++ + + P    +
Sbjct: 1   MKQLLILGSSTVTPP-TNPSSTPHHHHHSPKPKPKTPSLHAPSKPIPAVHSRSPPLLSTI 59

Query: 244 PLAS--------EKRLWVAKNLMKQGNLMDCLSLMREVSEKG--RVCVLGLLDLEDLKGC 393
           P           +    +A  L + G L D + +   V   G      +  L +  +   
Sbjct: 60  PFRQNHNSSSLLDYHANLASKLAEDGRLQDFVMIAESVIASGVEPSSFVAALSVGPVAKG 119

Query: 394 IGVHIENGDVGLVVDGLRILNEMGFHGPSLLDERALAMLGLELSKMVKKDSLGVKECVEG 573
           I  +++ G+V  VV  L+   E+G      LD  A+ +L  E  ++V      V++ V  
Sbjct: 120 ISKNLQQGNVDCVVRFLKKTEELGVSTLKFLDGVAIDLLKKECIRIVNCGD--VEQVVYI 177

Query: 574 LQVLEYCQFHTQELVEPMLVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIREFGRKG 753
           ++ L    F  +ELV+P  + K                             +I EFGRKG
Sbjct: 178 METLAGFCFSFKELVDPSYIIKICVDKLNPKMAVRYAAIFPGEGRILFCN-IISEFGRKG 236

Query: 754 DLSSALIVFRKYQSCNTTPNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNVLPSTFVYN 933
            L SAL+ + + +   + PNMYL+R IID CG CGD   +  I++++++  V+P+ +V+N
Sbjct: 237 HLDSALVAYDEAKHKLSVPNMYLHRTIIDVCGLCGDYMKSRYIYEDLINRKVIPNVYVFN 296

Query: 934 SFMNAVAADLNRTLQTFHDMQ 996
           S MN  A DL    + F +MQ
Sbjct: 297 SLMNVNAHDLGYPFRVFKNMQ 317


>ref|XP_004305248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 847

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 91/331 (27%), Positives = 143/331 (43%), Gaps = 18/331 (5%)
 Frame = +1

Query: 70   MRALLVVTCCSPLPPQTKTSNTNNDHDKKFINSARTTKLSTSTNNESSIKA----TTSPP 237
            MR L+++             N N +H           KL + + + SS  A    +T PP
Sbjct: 1    MRVLVILGYTRSSISTPPNPNPNGNHRSTKPYKPPIPKLLSPSKSSSSSSAPPIISTRPP 60

Query: 238  KVPLASEKRLW------------VAKNLMKQGNLMDCLSLMREVSEKG--RVCVLGLLDL 375
              PL +  R W            +A  L + G L D   L+  V   G         L L
Sbjct: 61   --PLFAGTR-WDPHHTHLSYFADLASKLARDGKLHDFSMLLESVVLSGVKPSQFTAALQL 117

Query: 376  EDLKGCIGVHIENGDVGLVVDGLRILNEMGFHGPSLLDERALAMLGLELSKMVKKDSLGV 555
            + +   I   +++G VG +V+ L  + E+G     L D  A+ +LG    +++K     V
Sbjct: 118  DMVSRGISGILKDGKVGGLVEVLVKVAELGVRPVELFDGYAMELLGAHCLRLLKFKQ--V 175

Query: 556  KECVEGLQVLEYCQFHTQELVEPMLVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIR 735
            +E VE ++VL    F  +ELV+P  V K                             ++ 
Sbjct: 176  QELVELMEVLYGLHFPIRELVDPSEVIKACVEKRRPKLAIRYACIFPHSHMLFCN--IMY 233

Query: 736  EFGRKGDLSSALIVFRKYQSCNTTPNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNVLP 915
            EFG+K  L+SAL  +   +   +  NMY+YR IID CG C D   +  I++++L   V+P
Sbjct: 234  EFGKKRALASALTAYEASKEKLSGSNMYIYRTIIDVCGVCKDYMKSRYIYEDLLKQKVIP 293

Query: 916  STFVYNSFMNAVAADLNRTLQTFHDMQSSGV 1008
            + +V+NS MN  + DL+ T   +  MQ+ GV
Sbjct: 294  NIYVFNSLMNVNSHDLSYTFHVYKSMQNLGV 324


>ref|XP_006398740.1| hypothetical protein EUTSA_v10012661mg [Eutrema salsugineum]
            gi|557099830|gb|ESQ40193.1| hypothetical protein
            EUTSA_v10012661mg [Eutrema salsugineum]
          Length = 863

 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 64/248 (25%), Positives = 117/248 (47%), Gaps = 3/248 (1%)
 Frame = +1

Query: 274  AKNLMKQGNLMDCLSLMREVSEKGRVCVL---GLLDLEDLKGCIGVHIENGDVGLVVDGL 444
            A  L + G + D   +   ++ +    V     ++D + L   I +++  G +  VV  L
Sbjct: 86   ASKLAEDGRIQDVALIAETLAAESGANVARFASMVDSDLLSKGISLNLRQGKIESVVYTL 145

Query: 445  RILNEMGFHGPSLLDERALAMLGLELSKMVKKDSLGVKECVEGLQVLEYCQFHTQELVEP 624
            + + ++G     L+DE ++ ++      M   +S+ V++ ++ +++L   +F  +ELV+P
Sbjct: 146  QRIEKVGIAPLDLVDESSVKLMRKHFRAMA--NSVQVEKAIDLMEILAGFRFKIKELVDP 203

Query: 625  MLVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIREFGRKGDLSSALIVFRKYQSCNT 804
              V K                             +I  FG+KGD+ S L  +   +    
Sbjct: 204  FDVVKICVDISNPQLAIRYACLLPHTELLLCR--IIHGFGKKGDMVSVLTAYEACKQILD 261

Query: 805  TPNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNVLPSTFVYNSFMNAVAADLNRTLQTF 984
             PNMY+YR +ID CG CGD   +  I++++L  N+ P+ +V NS MN  + DL  TL+ +
Sbjct: 262  NPNMYIYRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIYVMNSLMNVNSHDLGYTLKVY 321

Query: 985  HDMQSSGV 1008
             +MQ   V
Sbjct: 322  KNMQKLDV 329


>ref|XP_006398739.1| hypothetical protein EUTSA_v10012661mg [Eutrema salsugineum]
            gi|557099829|gb|ESQ40192.1| hypothetical protein
            EUTSA_v10012661mg [Eutrema salsugineum]
          Length = 858

 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 64/248 (25%), Positives = 117/248 (47%), Gaps = 3/248 (1%)
 Frame = +1

Query: 274  AKNLMKQGNLMDCLSLMREVSEKGRVCVL---GLLDLEDLKGCIGVHIENGDVGLVVDGL 444
            A  L + G + D   +   ++ +    V     ++D + L   I +++  G +  VV  L
Sbjct: 86   ASKLAEDGRIQDVALIAETLAAESGANVARFASMVDSDLLSKGISLNLRQGKIESVVYTL 145

Query: 445  RILNEMGFHGPSLLDERALAMLGLELSKMVKKDSLGVKECVEGLQVLEYCQFHTQELVEP 624
            + + ++G     L+DE ++ ++      M   +S+ V++ ++ +++L   +F  +ELV+P
Sbjct: 146  QRIEKVGIAPLDLVDESSVKLMRKHFRAMA--NSVQVEKAIDLMEILAGFRFKIKELVDP 203

Query: 625  MLVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIREFGRKGDLSSALIVFRKYQSCNT 804
              V K                             +I  FG+KGD+ S L  +   +    
Sbjct: 204  FDVVKICVDISNPQLAIRYACLLPHTELLLCR--IIHGFGKKGDMVSVLTAYEACKQILD 261

Query: 805  TPNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNVLPSTFVYNSFMNAVAADLNRTLQTF 984
             PNMY+YR +ID CG CGD   +  I++++L  N+ P+ +V NS MN  + DL  TL+ +
Sbjct: 262  NPNMYIYRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIYVMNSLMNVNSHDLGYTLKVY 321

Query: 985  HDMQSSGV 1008
             +MQ   V
Sbjct: 322  KNMQKLDV 329


>ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic [Vitis vinifera]
            gi|297741486|emb|CBI32618.3| unnamed protein product
            [Vitis vinifera]
          Length = 842

 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 83/302 (27%), Positives = 136/302 (45%)
 Frame = +1

Query: 103  PLPPQTKTSNTNNDHDKKFINSARTTKLSTSTNNESSIKATTSPPKVPLASEKRLWVAKN 282
            P+PP  +T        K  + ++ + +LS   ++  S     S  +  L +   L  A  
Sbjct: 17   PIPPHHRTKPKPKPKPKPSLLTSTSARLSPPISSLRSRHPLLSDVRWDLNNYSDL--ATK 74

Query: 283  LMKQGNLMDCLSLMREVSEKGRVCVLGLLDLEDLKGCIGVHIENGDVGLVVDGLRILNEM 462
            L++ G   D  S M E      V +  L++L    G  G+ +  G V  VV+ LR ++++
Sbjct: 75   LVQDGRFDD-FSTMAETLILSGVELSQLVELVSA-GISGL-LREGRVYCVVEVLRKVDKL 131

Query: 463  GFHGPSLLDERALAMLGLELSKMVKKDSLGVKECVEGLQVLEYCQFHTQELVEPMLVFKX 642
            G     L D   L +L  E  +++      V+E VE +++L+   F  ++L+EP+   K 
Sbjct: 132  GICPLELFDGSTLELLSKECRRILNCGQ--VEEVVELIEILDGFHFPVKKLLEPLDFIKI 189

Query: 643  XXXXXXXXXXXXXXXXXXXXXXXXXXXXLIREFGRKGDLSSALIVFRKYQSCNTTPNMYL 822
                                        +I EFG+K DL SAL  F   +     PNMY 
Sbjct: 190  CVNKRNPNLAVRYACILPHAQILFCT--IIHEFGKKRDLGSALTAFEASKQKLIGPNMYC 247

Query: 823  YRDIIDACGSCGDSTMAETIFKEMLSHNVLPSTFVYNSFMNAVAADLNRTLQTFHDMQSS 1002
            YR +ID CG C     +  I++E+L+  + P+ +V+NS MN    DL+ T   + +MQ+ 
Sbjct: 248  YRTMIDVCGLCSHYQKSRYIYEELLAQKITPNIYVFNSLMNVNVHDLSYTFNVYKNMQNL 307

Query: 1003 GV 1008
            GV
Sbjct: 308  GV 309


>gb|EMJ09280.1| hypothetical protein PRUPE_ppa001520mg [Prunus persica]
          Length = 809

 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 67/208 (32%), Positives = 101/208 (48%)
 Frame = +1

Query: 385  KGCIGVHIENGDVGLVVDGLRILNEMGFHGPSLLDERALAMLGLELSKMVKKDSLGVKEC 564
            KG  G+ ++ G V  VV+ L  +NE+G     L D  A+ +LG + S+++K     V+E 
Sbjct: 121  KGISGL-LKEGKVRSVVEVLGKVNELGVPPLKLFDGYAMELLGRQCSRLLKCKQ--VQEL 177

Query: 565  VEGLQVLEYCQFHTQELVEPMLVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIREFG 744
            VE ++ L   +F  +EL+EP  V K                             +I EFG
Sbjct: 178  VELMEALAGYRFPIKELLEPSEVIKLCVDKCCPKLAIRYACIFPHAHILFCN--IIYEFG 235

Query: 745  RKGDLSSALIVFRKYQSCNTTPNMYLYRDIIDACGSCGDSTMAETIFKEMLSHNVLPSTF 924
            ++  L  AL  +   +      NMY+YR IID CG C D   +  I++++L   V P+ +
Sbjct: 236  KRKALEPALAAYEASKENLNGSNMYVYRTIIDVCGLCKDYMKSRYIYEDLLKQKVTPNIY 295

Query: 925  VYNSFMNAVAADLNRTLQTFHDMQSSGV 1008
            V+NS MN  A DLN T   +  MQ+ GV
Sbjct: 296  VFNSLMNVNAHDLNYTFHVYKSMQNLGV 323


>ref|XP_004493936.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic-like [Cicer arietinum]
          Length = 799

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 3/217 (1%)
 Frame = +1

Query: 367  LDLEDLKGCIGVHIENGDVGLVVDGLRILNEMGFHGPSL---LDERALAMLGLELSKMVK 537
            L+ E L   + + I+  +  +V+D L  L  +G +G SL    DE A++++  E S MV 
Sbjct: 70   LNAELLANAVLMGIKGRNFRIVIDSLNKLQGIG-NGISLSTQFDESAMSVIAKECSFMVT 128

Query: 538  KDSLGVKECVEGLQVLEYCQFHTQELVEPMLVFKXXXXXXXXXXXXXXXXXXXXXXXXXX 717
                 ++E VE ++VL   Q    ELV+P  + K                          
Sbjct: 129  SGH--IQESVELMEVLSRYQLSIGELVQPSDIIKRCVLNRKPNLAVRYASLLPQAHILFC 186

Query: 718  XXXLIREFGRKGDLSSALIVFRKYQSCNTTPNMYLYRDIIDACGSCGDSTMAETIFKEML 897
               +I  FG+  DL SAL  +   +     PNMY+YR IID CG CGD   +  I++++L
Sbjct: 187  S--IISGFGKSRDLVSALKAYDAMKKNLKRPNMYIYRAIIDVCGLCGDFMKSRYIYEDLL 244

Query: 898  SHNVLPSTFVYNSFMNAVAADLNRTLQTFHDMQSSGV 1008
            +  + P+ +V+NS MNA A D++ TL  + +MQ  G+
Sbjct: 245  NQKITPNIYVFNSLMNANAHDISYTLNLYQNMQKVGL 281