BLASTX nr result

ID: Ephedra28_contig00017577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00017577
         (493 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006855311.1| hypothetical protein AMTR_s00057p00072880 [A...    57   3e-06
ref|XP_002978664.1| hypothetical protein SELMODRAFT_418465 [Sela...    56   6e-06
ref|XP_002984597.1| hypothetical protein SELMODRAFT_423782 [Sela...    56   6e-06

>ref|XP_006855311.1| hypothetical protein AMTR_s00057p00072880 [Amborella trichopoda]
           gi|548859077|gb|ERN16778.1| hypothetical protein
           AMTR_s00057p00072880 [Amborella trichopoda]
          Length = 403

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = -1

Query: 253 KRWVCIEFVPQGVSLSQIREALSVHGDIMGSFFQKG-SGIMSCYIEYKTLESKERALASR 77
           K  + I+ VP  +    +R+A S +GDI+      G +G  SC+I++K+ ESKERA+A+R
Sbjct: 193 KNSIIIDKVPSALCPFHLRDAASEYGDILHVHMTTGENGFKSCHIDFKSKESKERAVAAR 252

Query: 76  WISVNGKQLSI 44
           WISV   +L I
Sbjct: 253 WISVKSYRLPI 263


>ref|XP_002978664.1| hypothetical protein SELMODRAFT_418465 [Selaginella moellendorffii]
           gi|300153473|gb|EFJ20111.1| hypothetical protein
           SELMODRAFT_418465 [Selaginella moellendorffii]
          Length = 766

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
 Frame = -1

Query: 244 VCIEFVPQGVSLSQIREALSVHGDIMGSFFQKGSGIMSCYI-EYKTLESKERALASRWIS 68
           VC+E +P   +++Q+R+AL++HG+I  ++ +      S Y+ EY T E KE AL++ W+ 
Sbjct: 552 VCVENLPPTTNVTQLRDALAIHGEIYATYLKHRDMNSSTYVFEYLTDEGKESALSAHWVH 611

Query: 67  VNGKQLSI 44
           +NG+ + I
Sbjct: 612 INGQLVRI 619


>ref|XP_002984597.1| hypothetical protein SELMODRAFT_423782 [Selaginella moellendorffii]
           gi|300147579|gb|EFJ14242.1| hypothetical protein
           SELMODRAFT_423782 [Selaginella moellendorffii]
          Length = 758

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
 Frame = -1

Query: 244 VCIEFVPQGVSLSQIREALSVHGDIMGSFFQKGSGIMSCYI-EYKTLESKERALASRWIS 68
           VC+E +P   +++Q+R+AL++HG+I  ++ +      S Y+ EY T E KE AL++ W+ 
Sbjct: 552 VCVENLPPTTNVTQLRDALAIHGEIYATYLKHRDMNSSTYVFEYLTDEGKESALSAHWVH 611

Query: 67  VNGKQLSI 44
           +NG+ + I
Sbjct: 612 INGQLVRI 619


Top