BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00017525
         (516 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004983735.1| PREDICTED: translocase of chloroplast 120, c...    60   2e-07
ref|NP_001065307.1| Os10g0548800 [Oryza sativa Japonica Group] g...    56   4e-06
gb|EAY79428.1| hypothetical protein OsI_34561 [Oryza sativa Indi...    56   4e-06
ref|XP_002312975.2| hypothetical protein POPTR_0009s13380g [Popu...    55   7e-06
ref|XP_002464976.1| hypothetical protein SORBIDRAFT_01g029790 [S...    55   1e-05

>ref|XP_004983735.1| PREDICTED: translocase of chloroplast 120, chloroplastic-like
           [Setaria italica]
          Length = 971

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
 Frame = +2

Query: 227 FNSSAVSSPETCSPEKDNPKNAENEIEWIRTSFLDIVHMLGLSRDKQIVLQVLSRLHLAQ 406
           FN SA  + E+   + D       +++ IR  FL + H  G +    +V QVL RL LA+
Sbjct: 246 FNGSASLATESAEDDGDGNDEIHEKLQMIRVKFLRLAHRFGQTPHNMVVSQVLYRLGLAE 305

Query: 407 QLNCNKDNSITSTARATD--------GTGP-DHSCTILIIGKTGV 514
           QL     N   S  RA +        G  P D SCTIL++GKTGV
Sbjct: 306 QLRRTTANGSFSFDRAREMAERLEAAGNEPLDFSCTILVLGKTGV 350


>ref|NP_001065307.1| Os10g0548800 [Oryza sativa Japonica Group]
           gi|13876533|gb|AAK43509.1|AC020666_19 putative outer
           envelope protein [Oryza sativa Japonica Group]
           gi|31433389|gb|AAP54908.1| chloroplast outer membrane
           protein, putative, expressed [Oryza sativa Japonica
           Group] gi|113639839|dbj|BAF27144.1| Os10g0548800 [Oryza
           sativa Japonica Group] gi|125575606|gb|EAZ16890.1|
           hypothetical protein OsJ_32367 [Oryza sativa Japonica
           Group]
          Length = 1008

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
 Frame = +2

Query: 242 VSSPETCSPEKDNPKNAENEIEWIRTSFLDIVHMLGLSRDKQIVLQVLSRLHLAQQLNCN 421
           V SPE    + D       +++ IR  FL + +  G + +  +V QVL RL LA+QL  N
Sbjct: 299 VESPE----DGDENDEIREKLQMIRVKFLRLANRFGQTPNNMVVSQVLYRLGLAEQLRRN 354

Query: 422 KDNSITSTARATD--------GTGP-DHSCTILIIGKTGV 514
               + S  RA D        G  P D SCTIL++GKTGV
Sbjct: 355 TGQGVFSFDRAQDMAERLEAAGNEPLDFSCTILVLGKTGV 394


>gb|EAY79428.1| hypothetical protein OsI_34561 [Oryza sativa Indica Group]
          Length = 1008

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
 Frame = +2

Query: 242 VSSPETCSPEKDNPKNAENEIEWIRTSFLDIVHMLGLSRDKQIVLQVLSRLHLAQQLNCN 421
           V SPE    + D       +++ IR  FL + +  G + +  +V QVL RL LA+QL  N
Sbjct: 299 VESPE----DGDENDEIREKLQMIRVKFLRLANRFGQTPNNMVVSQVLYRLGLAEQLRRN 354

Query: 422 KDNSITSTARATD--------GTGP-DHSCTILIIGKTGV 514
               + S  RA D        G  P D SCTIL++GKTGV
Sbjct: 355 TGQGVFSFDRAQDMAERLEAAGNEPLDFSCTILVLGKTGV 394


>ref|XP_002312975.2| hypothetical protein POPTR_0009s13380g [Populus trichocarpa]
           gi|550331647|gb|EEE86930.2| hypothetical protein
           POPTR_0009s13380g [Populus trichocarpa]
          Length = 1135

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
 Frame = +2

Query: 275 DNPKNAENE--------IEWIRTSFLDIVHMLGLSRDKQIVLQVLSRLHLAQQLNCNKDN 430
           D+P N E+E        ++ IR  FL +VH LGL+ ++ +V QVL RL + +QL      
Sbjct: 416 DDPTNGESEEHDETHEKLKMIRVKFLRLVHRLGLAPNETVVAQVLYRLGIVEQLRGRNRG 475

Query: 431 SI------TSTARA----TDGTGP-DHSCTILIIGKTGV 514
            I       ++A A     DG  P D SCTI+++GKTGV
Sbjct: 476 RIGTLSFDPASAMAGQLEADGQEPLDFSCTIMVLGKTGV 514


>ref|XP_002464976.1| hypothetical protein SORBIDRAFT_01g029790 [Sorghum bicolor]
           gi|241918830|gb|EER91974.1| hypothetical protein
           SORBIDRAFT_01g029790 [Sorghum bicolor]
          Length = 989

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
 Frame = +2

Query: 125 VSHPDPELSASRLSQCTSSLITNLKNLNHTEENMFNSSAVSSPETCSPEKDNPKNAENEI 304
           +S P    S+S LSQ     + +++ +     +  +     + E+   ++D       ++
Sbjct: 232 LSRPAGLGSSSSLSQPP---VRSVQQVRANRPSAVDRGTQEATESAEDDRDENDEIHEKL 288

Query: 305 EWIRTSFLDIVHMLGLSRDKQIVLQVLSRLHLAQQLNCNKDNSITSTARATD-------- 460
           + IR  FL +    G +    +V QVL RL LA+QL     N   S  RA +        
Sbjct: 289 QMIRVKFLRLADRFGQTSHNMVVSQVLYRLGLAEQLRRTTANGTFSIDRAREMAERLEAA 348

Query: 461 GTGP-DHSCTILIIGKTGV 514
           G  P D SCTIL++GKTGV
Sbjct: 349 GNEPLDFSCTILVLGKTGV 367