BLASTX nr result

ID: Ephedra28_contig00017524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00017524
         (769 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16301.1| unknown [Picea sitchensis]                              89   2e-15
ref|XP_006829853.1| hypothetical protein AMTR_s00119p00123540 [A...    65   3e-08

>gb|ABR16301.1| unknown [Picea sitchensis]
          Length = 263

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 57/139 (41%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
 Frame = +3

Query: 3   YNVGIGYADIREELRYQLSVDGGNPIWSSASKNHTIGLGSRMKFVVKSVQEGIYLDIIGS 182
           +N  I   DIREE  YQ +VDG  PIW+S S NH I LGS++KF VKSVQE  +LDI GS
Sbjct: 123 FNAAIACTDIREEFCYQENVDG-IPIWASTSDNHVIRLGSKIKFSVKSVQEESFLDICGS 181

Query: 183 LMPANTGCVSAVSSSLEDIEEDXXXXXXXXXXXXXXETDAGNDTHNVEEKLVFSDE---D 353
           L P +TGCV  + S LED  +               E         V++      E   +
Sbjct: 182 LKPPDTGCVDWLLSPLEDKSDFLEVKRKKHKKEKSREMRKEKIDDEVKDSGTAKQEIHSN 241

Query: 354 LTAKRAHKSGSKRRRHNIN 410
              +R HK  SKR+R++ N
Sbjct: 242 HYHEREHKHRSKRKRNDTN 260


>ref|XP_006829853.1| hypothetical protein AMTR_s00119p00123540 [Amborella trichopoda]
           gi|548835434|gb|ERM97269.1| hypothetical protein
           AMTR_s00119p00123540 [Amborella trichopoda]
          Length = 236

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   YNVGIGYADIREELRYQLSVDGGNPIWSSASK-NHTIGLGSRMKFVVKSVQEGIYLDIIG 179
           +N  I   DIREE  Y+   DG  PIW S    +H I  G+ ++F+V+SV E I+++I G
Sbjct: 107 FNAAIAITDIREEFHYEKDEDG-EPIWVSTDHGDHVIRTGTVLRFLVESVTEDIFIEISG 165

Query: 180 SLMPANTGCVSAVSS 224
           SL P+ TGCV  +SS
Sbjct: 166 SLKPSKTGCVRWLSS 180


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