BLASTX nr result
ID: Ephedra28_contig00017509
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00017509
(499 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006363290.1| PREDICTED: serine--tRNA ligase, mitochondria... 139 5e-31
gb|ABR16691.1| unknown [Picea sitchensis] 139 5e-31
ref|XP_006472561.1| PREDICTED: serine--tRNA ligase, mitochondria... 136 3e-30
ref|XP_006433932.1| hypothetical protein CICLE_v10000915mg [Citr... 136 3e-30
ref|XP_004237941.1| PREDICTED: serine--tRNA ligase-like [Solanum... 136 3e-30
ref|XP_002513960.1| seryl-tRNA synthetase, putative [Ricinus com... 135 7e-30
ref|XP_006854224.1| hypothetical protein AMTR_s00048p00223180 [A... 132 5e-29
emb|CBI31123.3| unnamed protein product [Vitis vinifera] 132 5e-29
ref|XP_002264263.1| PREDICTED: seryl-tRNA synthetase-like [Vitis... 132 5e-29
emb|CAN70424.1| hypothetical protein VITISV_000798 [Vitis vinifera] 132 5e-29
ref|XP_002531115.1| seryl-tRNA synthetase, putative [Ricinus com... 132 6e-29
ref|XP_002301073.2| seryl-tRNA synthetase family protein [Populu... 131 1e-28
gb|ABK95128.1| unknown [Populus trichocarpa] 131 1e-28
gb|AAC17621.1| Similar to seryl-tRNA synthetase gb|U10400 from S... 129 5e-28
ref|NP_172651.1| Seryl-tRNA synthetase [Arabidopsis thaliana] gi... 129 5e-28
ref|NP_849647.1| Seryl-tRNA synthetase [Arabidopsis thaliana] gi... 129 5e-28
ref|XP_006304804.1| hypothetical protein CARUB_v10012421mg [Caps... 128 9e-28
ref|XP_006417298.1| hypothetical protein EUTSA_v10009769mg [Eutr... 127 1e-27
ref|XP_002889900.1| hypothetical protein ARALYDRAFT_471334 [Arab... 127 1e-27
ref|XP_004160298.1| PREDICTED: serine--tRNA ligase-like [Cucumis... 127 2e-27
>ref|XP_006363290.1| PREDICTED: serine--tRNA ligase, mitochondrial-like [Solanum
tuberosum]
Length = 507
Score = 139 bits (349), Expect = 5e-31
Identities = 68/95 (71%), Positives = 79/95 (83%), Gaps = 4/95 (4%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGNNTTSKPNK----LPLRFVHTLNATACAVPR 331
GLGRYGEISSASNCTDYQSRRL IRYRP +++++ P K P +FVHTLNATACAVPR
Sbjct: 409 GLGRYGEISSASNCTDYQSRRLGIRYRPESSSSASPKKGKNAAPTQFVHTLNATACAVPR 468
Query: 330 MIISIIENFQQEDGSVSIPAELQPFMAGQEIIFPK 226
MI+S++ENFQQEDGSV IP L+PFM G +II PK
Sbjct: 469 MIVSLLENFQQEDGSVIIPEPLRPFMGGLQIIKPK 503
>gb|ABR16691.1| unknown [Picea sitchensis]
Length = 542
Score = 139 bits (349), Expect = 5e-31
Identities = 72/100 (72%), Positives = 80/100 (80%), Gaps = 7/100 (7%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPG-----NNTTSKPNKLP--LRFVHTLNATACA 340
GLGRYGEISS+SNCTDYQSRRLNIRYRP +T KP K L+FVHTLNATACA
Sbjct: 442 GLGRYGEISSSSNCTDYQSRRLNIRYRPAIEESNPSTVVKPKKRKGQLKFVHTLNATACA 501
Query: 339 VPRMIISIIENFQQEDGSVSIPAELQPFMAGQEIIFPKTK 220
VPRMIISI+ENFQQEDGS+ IP LQPFM G ++I PK+K
Sbjct: 502 VPRMIISILENFQQEDGSIIIPEVLQPFMGGVKVISPKSK 541
>ref|XP_006472561.1| PREDICTED: serine--tRNA ligase, mitochondrial-like [Citrus
sinensis]
Length = 507
Score = 136 bits (343), Expect = 3e-30
Identities = 68/93 (73%), Positives = 76/93 (81%), Gaps = 2/93 (2%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPG--NNTTSKPNKLPLRFVHTLNATACAVPRMI 325
GLGRYGEISSASNCTDYQSRRL IRYRP ++T +K K P RFVHTLNATACA+PRMI
Sbjct: 413 GLGRYGEISSASNCTDYQSRRLGIRYRPSQPSSTNTKKGKGPTRFVHTLNATACAIPRMI 472
Query: 324 ISIIENFQQEDGSVSIPAELQPFMAGQEIIFPK 226
I ++EN+QQEDGSV IP L+PFM G E I PK
Sbjct: 473 ICLLENYQQEDGSVIIPEPLRPFMGGLERISPK 505
>ref|XP_006433932.1| hypothetical protein CICLE_v10000915mg [Citrus clementina]
gi|557536054|gb|ESR47172.1| hypothetical protein
CICLE_v10000915mg [Citrus clementina]
Length = 507
Score = 136 bits (343), Expect = 3e-30
Identities = 68/93 (73%), Positives = 76/93 (81%), Gaps = 2/93 (2%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPG--NNTTSKPNKLPLRFVHTLNATACAVPRMI 325
GLGRYGEISSASNCTDYQSRRL IRYRP ++T +K K P RFVHTLNATACA+PRMI
Sbjct: 413 GLGRYGEISSASNCTDYQSRRLGIRYRPSQLSSTNAKKGKGPTRFVHTLNATACAIPRMI 472
Query: 324 ISIIENFQQEDGSVSIPAELQPFMAGQEIIFPK 226
I ++EN+QQEDGSV IP L+PFM G E I PK
Sbjct: 473 ICLLENYQQEDGSVIIPEPLRPFMGGLERISPK 505
>ref|XP_004237941.1| PREDICTED: serine--tRNA ligase-like [Solanum lycopersicum]
Length = 509
Score = 136 bits (342), Expect = 3e-30
Identities = 68/94 (72%), Positives = 77/94 (81%), Gaps = 3/94 (3%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGNNTTSKP---NKLPLRFVHTLNATACAVPRM 328
GLGRYGEISSASNCTDYQSRRL IRYRP +++ S N P +FVHTLNATACAVPRM
Sbjct: 412 GLGRYGEISSASNCTDYQSRRLGIRYRPESSSASLKKGKNAAPTQFVHTLNATACAVPRM 471
Query: 327 IISIIENFQQEDGSVSIPAELQPFMAGQEIIFPK 226
I+S++ENFQQEDGSV IP L+PFM G +II PK
Sbjct: 472 IVSLLENFQQEDGSVIIPEPLRPFMGGLQIIKPK 505
>ref|XP_002513960.1| seryl-tRNA synthetase, putative [Ricinus communis]
gi|223547046|gb|EEF48543.1| seryl-tRNA synthetase,
putative [Ricinus communis]
Length = 517
Score = 135 bits (339), Expect = 7e-30
Identities = 67/97 (69%), Positives = 76/97 (78%), Gaps = 5/97 (5%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGNNTTSKPNKL-----PLRFVHTLNATACAVP 334
GLGRYGEISSASNCTDYQSRRL IRYRP + T P K P +FVHTLNATACAVP
Sbjct: 420 GLGRYGEISSASNCTDYQSRRLGIRYRPSDPTLRNPKKGKSSLGPTKFVHTLNATACAVP 479
Query: 333 RMIISIIENFQQEDGSVSIPAELQPFMAGQEIIFPKT 223
RM+I ++EN+QQEDGSV IP L+PFM G E+I PK+
Sbjct: 480 RMLICLLENYQQEDGSVIIPEPLRPFMGGLELIAPKS 516
>ref|XP_006854224.1| hypothetical protein AMTR_s00048p00223180 [Amborella trichopoda]
gi|548857893|gb|ERN15691.1| hypothetical protein
AMTR_s00048p00223180 [Amborella trichopoda]
Length = 513
Score = 132 bits (332), Expect = 5e-29
Identities = 68/101 (67%), Positives = 76/101 (75%), Gaps = 8/101 (7%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGNNTTSKPNKL--------PLRFVHTLNATAC 343
GLGRYGEISSASNCTDYQSRRL IRYRP T P KL P RFVHTLNATAC
Sbjct: 414 GLGRYGEISSASNCTDYQSRRLGIRYRPAM-TEPPPTKLKKGKGVTGPTRFVHTLNATAC 472
Query: 342 AVPRMIISIIENFQQEDGSVSIPAELQPFMAGQEIIFPKTK 220
AVPRM++ ++ENFQ+EDGSV IP L+PFM G ++I PK K
Sbjct: 473 AVPRMLVCLLENFQEEDGSVIIPQVLRPFMGGLDVISPKLK 513
>emb|CBI31123.3| unnamed protein product [Vitis vinifera]
Length = 168
Score = 132 bits (332), Expect = 5e-29
Identities = 65/96 (67%), Positives = 75/96 (78%), Gaps = 4/96 (4%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGNNTTSKP----NKLPLRFVHTLNATACAVPR 331
GLGRYGEISSASNCTDYQSRRL IRYRP + + P N P +FVHTLNATACAVPR
Sbjct: 58 GLGRYGEISSASNCTDYQSRRLGIRYRPSESLSMNPKRGMNLAPTQFVHTLNATACAVPR 117
Query: 330 MIISIIENFQQEDGSVSIPAELQPFMAGQEIIFPKT 223
MI+ ++EN+QQEDG+V IP L+PFM G E I PK+
Sbjct: 118 MIVCLLENYQQEDGNVIIPEPLRPFMGGLERITPKS 153
>ref|XP_002264263.1| PREDICTED: seryl-tRNA synthetase-like [Vitis vinifera]
Length = 207
Score = 132 bits (332), Expect = 5e-29
Identities = 65/96 (67%), Positives = 75/96 (78%), Gaps = 4/96 (4%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGNNTTSKP----NKLPLRFVHTLNATACAVPR 331
GLGRYGEISSASNCTDYQSRRL IRYRP + + P N P +FVHTLNATACAVPR
Sbjct: 98 GLGRYGEISSASNCTDYQSRRLGIRYRPSESLSMNPKRGMNLAPTQFVHTLNATACAVPR 157
Query: 330 MIISIIENFQQEDGSVSIPAELQPFMAGQEIIFPKT 223
MI+ ++EN+QQEDG+V IP L+PFM G E I PK+
Sbjct: 158 MIVCLLENYQQEDGNVIIPEPLRPFMGGLERITPKS 193
>emb|CAN70424.1| hypothetical protein VITISV_000798 [Vitis vinifera]
Length = 235
Score = 132 bits (332), Expect = 5e-29
Identities = 65/96 (67%), Positives = 75/96 (78%), Gaps = 4/96 (4%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGNNTTSKP----NKLPLRFVHTLNATACAVPR 331
GLGRYGEISSASNCTDYQSRRL IRYRP + + P N P +FVHTLNATACAVPR
Sbjct: 139 GLGRYGEISSASNCTDYQSRRLGIRYRPSESLSMNPKRGMNLAPTQFVHTLNATACAVPR 198
Query: 330 MIISIIENFQQEDGSVSIPAELQPFMAGQEIIFPKT 223
MI+ ++EN+QQEDG+V IP L+PFM G E I PK+
Sbjct: 199 MIVCLLENYQQEDGNVIIPEPLRPFMGGLERITPKS 234
>ref|XP_002531115.1| seryl-tRNA synthetase, putative [Ricinus communis]
gi|223529311|gb|EEF31280.1| seryl-tRNA synthetase,
putative [Ricinus communis]
Length = 119
Score = 132 bits (331), Expect = 6e-29
Identities = 66/97 (68%), Positives = 75/97 (77%), Gaps = 5/97 (5%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGNNTTSKPNK-----LPLRFVHTLNATACAVP 334
GLGRYGEISSASNCTDYQSRRL IRYRP + T P K P +FVHTLNATA AVP
Sbjct: 22 GLGRYGEISSASNCTDYQSRRLGIRYRPSDLTLKNPKKGKSSLAPTKFVHTLNATAFAVP 81
Query: 333 RMIISIIENFQQEDGSVSIPAELQPFMAGQEIIFPKT 223
RM+I ++EN+QQEDGSV IP L+PFM G E+I PK+
Sbjct: 82 RMLICLLENYQQEDGSVVIPEPLRPFMGGLELIAPKS 118
>ref|XP_002301073.2| seryl-tRNA synthetase family protein [Populus trichocarpa]
gi|550344677|gb|EEE80346.2| seryl-tRNA synthetase family
protein [Populus trichocarpa]
Length = 523
Score = 131 bits (329), Expect = 1e-28
Identities = 65/97 (67%), Positives = 74/97 (76%), Gaps = 5/97 (5%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGNNTTSKPNK-----LPLRFVHTLNATACAVP 334
GLGRYGEISSASNC DYQSRRL IRYRP T + P K P +FVHTLNATACAVP
Sbjct: 426 GLGRYGEISSASNCIDYQSRRLGIRYRPSEPTPAPPKKGKGSLAPTQFVHTLNATACAVP 485
Query: 333 RMIISIIENFQQEDGSVSIPAELQPFMAGQEIIFPKT 223
RMI+ ++EN+QQEDGSV IP L+ FM G E+I PK+
Sbjct: 486 RMIVCLLENYQQEDGSVIIPGPLRAFMGGLELITPKS 522
>gb|ABK95128.1| unknown [Populus trichocarpa]
Length = 523
Score = 131 bits (329), Expect = 1e-28
Identities = 65/97 (67%), Positives = 74/97 (76%), Gaps = 5/97 (5%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGNNTTSKPNK-----LPLRFVHTLNATACAVP 334
GLGRYGEISSASNC DYQSRRL IRYRP T + P K P +FVHTLNATACAVP
Sbjct: 426 GLGRYGEISSASNCIDYQSRRLGIRYRPSEPTPAPPKKGKGSLAPTQFVHTLNATACAVP 485
Query: 333 RMIISIIENFQQEDGSVSIPAELQPFMAGQEIIFPKT 223
RMI+ ++EN+QQEDGSV IP L+ FM G E+I PK+
Sbjct: 486 RMIVCLLENYQQEDGSVIIPGPLRAFMGGLELITPKS 522
>gb|AAC17621.1| Similar to seryl-tRNA synthetase gb|U10400 from S cerevisiae. EST
gb|N96627 comes from this gene [Arabidopsis thaliana]
Length = 573
Score = 129 bits (323), Expect = 5e-28
Identities = 66/98 (67%), Positives = 76/98 (77%), Gaps = 5/98 (5%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGNNTTSKPNK----LPL-RFVHTLNATACAVP 334
GLGR+GEISSASNCTDYQSRRL IRYRP + P K LP +FVHTLNATACAVP
Sbjct: 436 GLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPATKFVHTLNATACAVP 495
Query: 333 RMIISIIENFQQEDGSVSIPAELQPFMAGQEIIFPKTK 220
RM++ ++EN+QQEDGSV IP L+PFM G E+I PK K
Sbjct: 496 RMMVCLLENYQQEDGSVVIPEPLRPFMGGIELIKPKHK 533
>ref|NP_172651.1| Seryl-tRNA synthetase [Arabidopsis thaliana]
gi|332190686|gb|AEE28807.1| Seryl-tRNA synthetase
[Arabidopsis thaliana]
Length = 512
Score = 129 bits (323), Expect = 5e-28
Identities = 66/98 (67%), Positives = 76/98 (77%), Gaps = 5/98 (5%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGNNTTSKPNK----LPL-RFVHTLNATACAVP 334
GLGR+GEISSASNCTDYQSRRL IRYRP + P K LP +FVHTLNATACAVP
Sbjct: 415 GLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPATKFVHTLNATACAVP 474
Query: 333 RMIISIIENFQQEDGSVSIPAELQPFMAGQEIIFPKTK 220
RM++ ++EN+QQEDGSV IP L+PFM G E+I PK K
Sbjct: 475 RMMVCLLENYQQEDGSVVIPEPLRPFMGGIELIKPKHK 512
>ref|NP_849647.1| Seryl-tRNA synthetase [Arabidopsis thaliana]
gi|20268723|gb|AAM14065.1| putative seryl-tRNA
synthetase [Arabidopsis thaliana]
gi|21689901|gb|AAM67511.1| putative seryl-tRNA
synthetase [Arabidopsis thaliana]
gi|332190684|gb|AEE28805.1| Seryl-tRNA synthetase
[Arabidopsis thaliana]
Length = 514
Score = 129 bits (323), Expect = 5e-28
Identities = 66/98 (67%), Positives = 76/98 (77%), Gaps = 5/98 (5%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGNNTTSKPNK----LPL-RFVHTLNATACAVP 334
GLGR+GEISSASNCTDYQSRRL IRYRP + P K LP +FVHTLNATACAVP
Sbjct: 417 GLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPATKFVHTLNATACAVP 476
Query: 333 RMIISIIENFQQEDGSVSIPAELQPFMAGQEIIFPKTK 220
RM++ ++EN+QQEDGSV IP L+PFM G E+I PK K
Sbjct: 477 RMMVCLLENYQQEDGSVVIPEPLRPFMGGIELIKPKHK 514
>ref|XP_006304804.1| hypothetical protein CARUB_v10012421mg [Capsella rubella]
gi|482573515|gb|EOA37702.1| hypothetical protein
CARUB_v10012421mg [Capsella rubella]
Length = 515
Score = 128 bits (321), Expect = 9e-28
Identities = 66/98 (67%), Positives = 76/98 (77%), Gaps = 5/98 (5%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGN--NTTSKPNKLPL---RFVHTLNATACAVP 334
GLGR+GEISSASNCTDYQSRRL IRYRP T +K K L +FVHTLNATACAVP
Sbjct: 418 GLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGAKKGKTNLPATKFVHTLNATACAVP 477
Query: 333 RMIISIIENFQQEDGSVSIPAELQPFMAGQEIIFPKTK 220
RM++ ++EN+QQEDGSV IP L+PFM G E+I PK K
Sbjct: 478 RMMVCLLENYQQEDGSVVIPEPLRPFMGGIELIKPKLK 515
>ref|XP_006417298.1| hypothetical protein EUTSA_v10009769mg [Eutrema salsugineum]
gi|557095069|gb|ESQ35651.1| hypothetical protein
EUTSA_v10009769mg [Eutrema salsugineum]
Length = 513
Score = 127 bits (320), Expect = 1e-27
Identities = 65/98 (66%), Positives = 76/98 (77%), Gaps = 5/98 (5%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGN--NTTSKPNKLPL---RFVHTLNATACAVP 334
GLGR+GEISSASNCTDYQSRRL IRYRP SK K+ L +FVHTLNATACAVP
Sbjct: 416 GLGRFGEISSASNCTDYQSRRLGIRYRPSEPLQADSKKGKMNLPAPKFVHTLNATACAVP 475
Query: 333 RMIISIIENFQQEDGSVSIPAELQPFMAGQEIIFPKTK 220
RM++ ++EN+QQEDGSV IP L+PFM G E+I PK +
Sbjct: 476 RMMVCLLENYQQEDGSVVIPEPLRPFMGGIELIKPKLR 513
>ref|XP_002889900.1| hypothetical protein ARALYDRAFT_471334 [Arabidopsis lyrata subsp.
lyrata] gi|297335742|gb|EFH66159.1| hypothetical protein
ARALYDRAFT_471334 [Arabidopsis lyrata subsp. lyrata]
Length = 511
Score = 127 bits (320), Expect = 1e-27
Identities = 64/98 (65%), Positives = 76/98 (77%), Gaps = 5/98 (5%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGNNTTSKPNK----LPL-RFVHTLNATACAVP 334
GLGR+GEISSASNCTDYQSRRL IRYRP + P K LP +FVHTLNATACA+P
Sbjct: 414 GLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPATKFVHTLNATACAIP 473
Query: 333 RMIISIIENFQQEDGSVSIPAELQPFMAGQEIIFPKTK 220
RM++ ++EN+QQEDG+V IP L+PFM G E+I PK K
Sbjct: 474 RMMVCLLENYQQEDGAVVIPEPLRPFMGGIELIKPKLK 511
>ref|XP_004160298.1| PREDICTED: serine--tRNA ligase-like [Cucumis sativus]
Length = 563
Score = 127 bits (319), Expect = 2e-27
Identities = 64/95 (67%), Positives = 72/95 (75%), Gaps = 5/95 (5%)
Frame = -2
Query: 498 GLGRYGEISSASNCTDYQSRRLNIRYRPGNNTTS-----KPNKLPLRFVHTLNATACAVP 334
GLGRYGEISSASNCTDYQSRRL IRYRP S K N P +FVHTLNATACAVP
Sbjct: 466 GLGRYGEISSASNCTDYQSRRLGIRYRPQEQVPSTLKKGKGNLAPTQFVHTLNATACAVP 525
Query: 333 RMIISIIENFQQEDGSVSIPAELQPFMAGQEIIFP 229
RM++ ++EN+QQEDGSV IP L+PFM G + I P
Sbjct: 526 RMMVCLLENYQQEDGSVIIPEPLRPFMGGLDRISP 560