BLASTX nr result
ID: Ephedra28_contig00017319
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00017319
(666 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006429952.1| hypothetical protein CICLE_v10013867mg [Citr... 155 1e-35
ref|XP_006481689.1| PREDICTED: protein RRP5 homolog isoform X2 [... 152 9e-35
ref|XP_006481688.1| PREDICTED: protein RRP5 homolog isoform X1 [... 152 9e-35
ref|XP_001768429.1| predicted protein [Physcomitrella patens] gi... 148 2e-33
dbj|BAB03107.1| pre-rRNA processing protein RRP5 [Arabidopsis th... 145 1e-32
ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinif... 145 1e-32
emb|CBI29966.3| unnamed protein product [Vitis vinifera] 145 1e-32
ref|NP_187803.4| protein ribosomal RNA processing 5 [Arabidopsis... 145 1e-32
gb|AAF23213.1|AC016795_26 putative pre-rRNA processing protein, ... 145 1e-32
gb|EXB29321.1| Protein RRP5-like protein [Morus notabilis] 144 2e-32
ref|XP_006407387.1| hypothetical protein EUTSA_v10019877mg [Eutr... 143 4e-32
ref|XP_006657541.1| PREDICTED: protein RRP5 homolog [Oryza brach... 141 2e-31
gb|EOY09615.1| RNA binding,RNA binding isoform 2 [Theobroma cacao] 140 3e-31
gb|EOY09614.1| RNA binding,RNA binding isoform 1 [Theobroma cacao] 140 3e-31
gb|EPS59007.1| hypothetical protein M569_15804, partial [Genlise... 139 8e-31
ref|XP_002884876.1| S1 RNA-binding domain-containing protein [Ar... 139 1e-30
ref|XP_006296818.1| hypothetical protein CARUB_v10012800mg [Caps... 137 3e-30
dbj|BAC79783.2| putative pre-rRNA processing protein RRP5 [Oryza... 135 8e-30
ref|NP_001059139.1| Os07g0203300 [Oryza sativa Japonica Group] g... 135 8e-30
ref|XP_003563778.1| PREDICTED: protein RRP5 homolog [Brachypodiu... 135 1e-29
>ref|XP_006429952.1| hypothetical protein CICLE_v10013867mg [Citrus clementina]
gi|557532009|gb|ESR43192.1| hypothetical protein
CICLE_v10013867mg [Citrus clementina]
Length = 1935
Score = 155 bits (391), Expect = 1e-35
Identities = 94/248 (37%), Positives = 138/248 (55%), Gaps = 27/248 (10%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
+ IEN+N G C LS+ ++NI Y G+KV+AK+L+V + +++ + LGMK+S+
Sbjct: 1486 ITIENTNLVGLCHVSELSEDHVDNIETIYRAGEKVKAKILKVDKEKRR--ISLGMKSSYF 1543
Query: 183 SNEKGVSQNVYQE-----------LHETDFLETWDAA----------------SECKSNT 281
N+ Q +E + + LE A ++ +S
Sbjct: 1544 KNDADNLQMSSEEESDEAIEEVGSYNRSSLLENSSVAVQDMDMESEDGGSLVLAQIESRA 1603
Query: 282 SICPLEVHLDTEAVNTAAGDTNGSSDIETSGLVDKKANXXXXXXXXXXXXXXISAAERRR 461
S+ PLEV+LD E ++ G + + + +D+K N I AAE R
Sbjct: 1604 SVPPLEVNLDDEQLDMDNGISQNQGHTDEAKTIDEKNNRHAKKKEKEEREQEIRAAEERL 1663
Query: 462 LEGDKAPESVDEYEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREED 641
LE D AP + DE+E+ VRSSPNSS+VWIKYMA +LS+ +++KAR +AERALQTIN REE+
Sbjct: 1664 LEKD-APRTPDEFERLVRSSPNSSFVWIKYMAFMLSMADVEKARSIAERALQTINIREEN 1722
Query: 642 EKLNVWVA 665
EKLN+WVA
Sbjct: 1723 EKLNIWVA 1730
>ref|XP_006481689.1| PREDICTED: protein RRP5 homolog isoform X2 [Citrus sinensis]
Length = 1923
Score = 152 bits (384), Expect = 9e-35
Identities = 93/248 (37%), Positives = 136/248 (54%), Gaps = 27/248 (10%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
+ IEN+N G C LS+ ++NI Y G+KV+ K+L+V + +++ + LGMK+S+
Sbjct: 1474 ITIENTNLVGLCHVSELSEDHVDNIGTIYRAGEKVKVKILKVDKEKRR--ISLGMKSSYF 1531
Query: 183 SNEKGVSQNVYQE-----------LHETDFLETWDAA----------------SECKSNT 281
N+ Q +E + + LE A ++ +S
Sbjct: 1532 KNDADNLQMSSEEESDEAIEEVGSYNRSSLLENSSVAVQDMDTESEDGGSLVLAQIESRA 1591
Query: 282 SICPLEVHLDTEAVNTAAGDTNGSSDIETSGLVDKKANXXXXXXXXXXXXXXISAAERRR 461
S+ PLEV+LD E + G + + + +D+K N I AAE R
Sbjct: 1592 SVPPLEVNLDDEQPDMDNGISQNQGHTDEAKTIDEKNNRHAKKKEKEEREQEIRAAEERL 1651
Query: 462 LEGDKAPESVDEYEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREED 641
LE D AP + DE+E+ VRSSPNSS+VWIKYMA +LS+ +++KAR +AERALQTIN REE+
Sbjct: 1652 LEKD-APRTPDEFERLVRSSPNSSFVWIKYMAFMLSMADVEKARSIAERALQTINIREEN 1710
Query: 642 EKLNVWVA 665
EKLN+WVA
Sbjct: 1711 EKLNIWVA 1718
>ref|XP_006481688.1| PREDICTED: protein RRP5 homolog isoform X1 [Citrus sinensis]
Length = 1934
Score = 152 bits (384), Expect = 9e-35
Identities = 93/248 (37%), Positives = 136/248 (54%), Gaps = 27/248 (10%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
+ IEN+N G C LS+ ++NI Y G+KV+ K+L+V + +++ + LGMK+S+
Sbjct: 1485 ITIENTNLVGLCHVSELSEDHVDNIGTIYRAGEKVKVKILKVDKEKRR--ISLGMKSSYF 1542
Query: 183 SNEKGVSQNVYQE-----------LHETDFLETWDAA----------------SECKSNT 281
N+ Q +E + + LE A ++ +S
Sbjct: 1543 KNDADNLQMSSEEESDEAIEEVGSYNRSSLLENSSVAVQDMDTESEDGGSLVLAQIESRA 1602
Query: 282 SICPLEVHLDTEAVNTAAGDTNGSSDIETSGLVDKKANXXXXXXXXXXXXXXISAAERRR 461
S+ PLEV+LD E + G + + + +D+K N I AAE R
Sbjct: 1603 SVPPLEVNLDDEQPDMDNGISQNQGHTDEAKTIDEKNNRHAKKKEKEEREQEIRAAEERL 1662
Query: 462 LEGDKAPESVDEYEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREED 641
LE D AP + DE+E+ VRSSPNSS+VWIKYMA +LS+ +++KAR +AERALQTIN REE+
Sbjct: 1663 LEKD-APRTPDEFERLVRSSPNSSFVWIKYMAFMLSMADVEKARSIAERALQTINIREEN 1721
Query: 642 EKLNVWVA 665
EKLN+WVA
Sbjct: 1722 EKLNIWVA 1729
>ref|XP_001768429.1| predicted protein [Physcomitrella patens] gi|162680354|gb|EDQ66791.1|
predicted protein [Physcomitrella patens]
Length = 1785
Score = 148 bits (373), Expect = 2e-33
Identities = 95/238 (39%), Positives = 133/238 (55%), Gaps = 17/238 (7%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
V IE S+ C ++D +I Y +G +VRA+VL+V +++ + LG+K S+
Sbjct: 1339 VTIEQSSVVTMCHMSEVADHYFKDIDKHYKVGDRVRARVLKVDNTKQR--ISLGLKESYF 1396
Query: 183 SNEKGVSQNVYQELHETDFLETWDAASECKSNTSICPLEVHL-DTEAVNTAAGDTNGSS- 356
SN + Q V +E E + +C+ + E +L D++ + G+ N
Sbjct: 1397 SNTETHVQPVTEEDDMKVTNEEDELVDDCEESEEDDVDEENLEDSKGTPSDEGNLNTPPL 1456
Query: 357 --DIETSGLVD-------------KKANXXXXXXXXXXXXXXISAAERRRLEGDKAPESV 491
D+E + +VD KK N ISAAE RRL+GD+APE+V
Sbjct: 1457 EVDLEDTNVVDDSEKEEDEESEDAKKLNKRAKKRLKQQREAEISAAEERRLKGDQAPETV 1516
Query: 492 DEYEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREEDEKLNVWVA 665
DE+E VR+SPNSS VWIKYMA LL L ++DKAR +AERALQTIN+REE EKLNVW+A
Sbjct: 1517 DEFEALVRTSPNSSLVWIKYMAFLLQLADVDKARAIAERALQTINYREEMEKLNVWIA 1574
>dbj|BAB03107.1| pre-rRNA processing protein RRP5 [Arabidopsis thaliana]
Length = 1765
Score = 145 bits (365), Expect = 1e-32
Identities = 96/245 (39%), Positives = 133/245 (54%), Gaps = 24/245 (9%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
+DI+ + G C LSD ++ N+ Y G+ VRAK+L++ E +K+ + LGMK+S+L
Sbjct: 1321 IDIDQTGMVGLCHISQLSDDRMENVQARYKAGESVRAKILKLDEEKKR--ISLGMKSSYL 1378
Query: 183 SN----------EKGVSQN----------VYQELHETDFLETWDAAS----ECKSNTSIC 290
N E S V + + F ET S + +S SI
Sbjct: 1379 MNGDDDKAQPLSEDNTSMECDPINDPKSEVLAAVDDFGFQETSGGTSLVLAQVESRASIP 1438
Query: 291 PLEVHLDTEAVNTAAGDTNGSSDIETSGLVDKKANXXXXXXXXXXXXXXISAAERRRLEG 470
PLEV LD + D++ + + D+K+ I AAE R LE
Sbjct: 1439 PLEVDLDD--IEETDFDSSQNQEKLLGANKDEKSKRREKQKDKEEREKKIQAAEGRLLE- 1495
Query: 471 DKAPESVDEYEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREEDEKL 650
APE+ DE+E+ VRSSPNSS+VWIKYMA +LSL +I+KAR +AERAL+TIN REE+EKL
Sbjct: 1496 HHAPENADEFEKLVRSSPNSSFVWIKYMAFMLSLADIEKARSIAERALRTINIREEEEKL 1555
Query: 651 NVWVA 665
N+WVA
Sbjct: 1556 NIWVA 1560
>ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinifera]
Length = 1879
Score = 145 bits (365), Expect = 1e-32
Identities = 94/242 (38%), Positives = 132/242 (54%), Gaps = 21/242 (8%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNS-- 176
+ I+++N G C LSD I+NI +Y G++V AK+L+V E + + LGMKNS
Sbjct: 1441 ITIDDTNMVGLCHISELSDDHISNIETKYKAGERVAAKILKVDEERHR--ISLGMKNSYI 1498
Query: 177 -----------------FLSNEKGVSQNVYQELHETDFLETWDAASECKSNTSICPLEVH 305
FL N QN+ E + E + S+ +S SI PLEV
Sbjct: 1499 KETTQNNGFVDDTQLSTFLENNSREIQNLDVEYED----EEYPVLSQVESRASILPLEVD 1554
Query: 306 LDTEAVNTAAGDTNGSSDIETS--GLVDKKANXXXXXXXXXXXXXXISAAERRRLEGDKA 479
LD + ++ D G + I T+ +D+K+ I AAE R + D
Sbjct: 1555 LD-DVNHSNLDDAVGQNHIYTNETNTIDEKSKRRAKKKAKEEKEQEIRAAEERLMLND-V 1612
Query: 480 PESVDEYEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREEDEKLNVW 659
P + DE+E+ VR SPNSS++WIKYMA +LSL +I+KAR +AERAL+TIN REE EKLN+W
Sbjct: 1613 PRTADEFEKLVRGSPNSSFLWIKYMALMLSLADIEKARSIAERALRTINIREESEKLNIW 1672
Query: 660 VA 665
+A
Sbjct: 1673 MA 1674
>emb|CBI29966.3| unnamed protein product [Vitis vinifera]
Length = 1862
Score = 145 bits (365), Expect = 1e-32
Identities = 94/242 (38%), Positives = 132/242 (54%), Gaps = 21/242 (8%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNS-- 176
+ I+++N G C LSD I+NI +Y G++V AK+L+V E + + LGMKNS
Sbjct: 1424 ITIDDTNMVGLCHISELSDDHISNIETKYKAGERVAAKILKVDEERHR--ISLGMKNSYI 1481
Query: 177 -----------------FLSNEKGVSQNVYQELHETDFLETWDAASECKSNTSICPLEVH 305
FL N QN+ E + E + S+ +S SI PLEV
Sbjct: 1482 KETTQNNGFVDDTQLSTFLENNSREIQNLDVEYED----EEYPVLSQVESRASILPLEVD 1537
Query: 306 LDTEAVNTAAGDTNGSSDIETS--GLVDKKANXXXXXXXXXXXXXXISAAERRRLEGDKA 479
LD + ++ D G + I T+ +D+K+ I AAE R + D
Sbjct: 1538 LD-DVNHSNLDDAVGQNHIYTNETNTIDEKSKRRAKKKAKEEKEQEIRAAEERLMLND-V 1595
Query: 480 PESVDEYEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREEDEKLNVW 659
P + DE+E+ VR SPNSS++WIKYMA +LSL +I+KAR +AERAL+TIN REE EKLN+W
Sbjct: 1596 PRTADEFEKLVRGSPNSSFLWIKYMALMLSLADIEKARSIAERALRTINIREESEKLNIW 1655
Query: 660 VA 665
+A
Sbjct: 1656 MA 1657
>ref|NP_187803.4| protein ribosomal RNA processing 5 [Arabidopsis thaliana]
gi|332641610|gb|AEE75131.1| protein ribosomal RNA
processing 5 [Arabidopsis thaliana]
Length = 1896
Score = 145 bits (365), Expect = 1e-32
Identities = 96/245 (39%), Positives = 133/245 (54%), Gaps = 24/245 (9%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
+DI+ + G C LSD ++ N+ Y G+ VRAK+L++ E +K+ + LGMK+S+L
Sbjct: 1452 IDIDQTGMVGLCHISQLSDDRMENVQARYKAGESVRAKILKLDEEKKR--ISLGMKSSYL 1509
Query: 183 SN----------EKGVSQN----------VYQELHETDFLETWDAAS----ECKSNTSIC 290
N E S V + + F ET S + +S SI
Sbjct: 1510 MNGDDDKAQPLSEDNTSMECDPINDPKSEVLAAVDDFGFQETSGGTSLVLAQVESRASIP 1569
Query: 291 PLEVHLDTEAVNTAAGDTNGSSDIETSGLVDKKANXXXXXXXXXXXXXXISAAERRRLEG 470
PLEV LD + D++ + + D+K+ I AAE R LE
Sbjct: 1570 PLEVDLDD--IEETDFDSSQNQEKLLGANKDEKSKRREKQKDKEEREKKIQAAEGRLLE- 1626
Query: 471 DKAPESVDEYEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREEDEKL 650
APE+ DE+E+ VRSSPNSS+VWIKYMA +LSL +I+KAR +AERAL+TIN REE+EKL
Sbjct: 1627 HHAPENADEFEKLVRSSPNSSFVWIKYMAFMLSLADIEKARSIAERALRTINIREEEEKL 1686
Query: 651 NVWVA 665
N+WVA
Sbjct: 1687 NIWVA 1691
>gb|AAF23213.1|AC016795_26 putative pre-rRNA processing protein, 5' partial [Arabidopsis
thaliana]
Length = 1111
Score = 145 bits (365), Expect = 1e-32
Identities = 96/245 (39%), Positives = 133/245 (54%), Gaps = 24/245 (9%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
+DI+ + G C LSD ++ N+ Y G+ VRAK+L++ E +K+ + LGMK+S+L
Sbjct: 667 IDIDQTGMVGLCHISQLSDDRMENVQARYKAGESVRAKILKLDEEKKR--ISLGMKSSYL 724
Query: 183 SN----------EKGVSQN----------VYQELHETDFLETWDAAS----ECKSNTSIC 290
N E S V + + F ET S + +S SI
Sbjct: 725 MNGDDDKAQPLSEDNTSMECDPINDPKSEVLAAVDDFGFQETSGGTSLVLAQVESRASIP 784
Query: 291 PLEVHLDTEAVNTAAGDTNGSSDIETSGLVDKKANXXXXXXXXXXXXXXISAAERRRLEG 470
PLEV LD + D++ + + D+K+ I AAE R LE
Sbjct: 785 PLEVDLDD--IEETDFDSSQNQEKLLGANKDEKSKRREKQKDKEEREKKIQAAEGRLLE- 841
Query: 471 DKAPESVDEYEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREEDEKL 650
APE+ DE+E+ VRSSPNSS+VWIKYMA +LSL +I+KAR +AERAL+TIN REE+EKL
Sbjct: 842 HHAPENADEFEKLVRSSPNSSFVWIKYMAFMLSLADIEKARSIAERALRTINIREEEEKL 901
Query: 651 NVWVA 665
N+WVA
Sbjct: 902 NIWVA 906
>gb|EXB29321.1| Protein RRP5-like protein [Morus notabilis]
Length = 1916
Score = 144 bits (364), Expect = 2e-32
Identities = 91/244 (37%), Positives = 134/244 (54%), Gaps = 23/244 (9%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
+ I ++N G C K LSD +I+NI +Y G++VRAK+L+V + + LGMK+S+L
Sbjct: 1473 ITINDTNLVGLCHKSELSDDQIDNIEAKYRAGERVRAKILKVDPQRNR--ISLGMKDSYL 1530
Query: 183 SNEKGVSQNVYQE-------LHETDFLETWD-------------AASECKSNTSICPLEV 302
++ +N QE +++T + D ++ +S S+ PLEV
Sbjct: 1531 LDDNDTEENSDQEADASNGFVNDTKLISLPDNDMDVECANLEIPILAQAESRASVPPLEV 1590
Query: 303 HLDT---EAVNTAAGDTNGSSDIETSGLVDKKANXXXXXXXXXXXXXXISAAERRRLEGD 473
LD E VN + I+ + +D+K I AAE R LE D
Sbjct: 1591 TLDDVYQEDVNNVV--SRNEEPIDEATTLDEKTKRRGKKKAKEEREREIRAAEERLLEKD 1648
Query: 474 KAPESVDEYEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREEDEKLN 653
P + +E+E+ VR SPNSS+VWIKYM +S+ +++KAR +AERALQTIN REE+EKLN
Sbjct: 1649 -IPRTTEEFEKLVRGSPNSSFVWIKYMDFAISMADVEKARSIAERALQTINIREENEKLN 1707
Query: 654 VWVA 665
+WVA
Sbjct: 1708 IWVA 1711
>ref|XP_006407387.1| hypothetical protein EUTSA_v10019877mg [Eutrema salsugineum]
gi|557108533|gb|ESQ48840.1| hypothetical protein
EUTSA_v10019877mg [Eutrema salsugineum]
Length = 1926
Score = 143 bits (361), Expect = 4e-32
Identities = 96/252 (38%), Positives = 135/252 (53%), Gaps = 31/252 (12%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
++I+ + G C K LSD +I ++ Y G+ V AK+L++ E +++ + LGMK+S+L
Sbjct: 1475 IEIDQTGMVGLCHKSQLSDDRIEDVQARYKAGESVTAKILKLDEEKRR--ISLGMKSSYL 1532
Query: 183 SNEKGVS------QNVYQELHETD-----------------FLETWD--------AASEC 269
N V +N + E D F ET ++
Sbjct: 1533 MNGDDVEAQPPSEENANEGSMECDPINDSKSRVLAAVGDFGFQETTGERHNGTSLVLAQV 1592
Query: 270 KSNTSICPLEVHLDTEAVNTAAGDTNGSSDIETSGLVDKKANXXXXXXXXXXXXXXISAA 449
+S SI PLEV LD + + D N + + D+K+ I AA
Sbjct: 1593 ESRASIPPLEVDLDD--IEESDFDNNQNQEKLQGANKDEKSKRREKQKDKEEREKQIQAA 1650
Query: 450 ERRRLEGDKAPESVDEYEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINF 629
E R LE + APES DE+E+ VRSSPNSS+VWIKYMA +LSL +I+KAR +AERAL+TIN
Sbjct: 1651 EGRLLE-NHAPESADEFEKLVRSSPNSSFVWIKYMAFVLSLADIEKARSIAERALRTINI 1709
Query: 630 REEDEKLNVWVA 665
REE+EKLN+WVA
Sbjct: 1710 REEEEKLNIWVA 1721
>ref|XP_006657541.1| PREDICTED: protein RRP5 homolog [Oryza brachyantha]
Length = 1705
Score = 141 bits (355), Expect = 2e-31
Identities = 91/232 (39%), Positives = 127/232 (54%), Gaps = 11/232 (4%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
V I+ S G C LSD+ + +I + + G V+AK+L++ E K+ + LGMK S++
Sbjct: 1270 VTIQGSELVGLCHVSELSDEPVVDIHSCHKAGDIVKAKILKIDE--KRHRVSLGMKKSYI 1327
Query: 183 SNEKGVSQNVYQ--ELHETDF---------LETWDAASECKSNTSICPLEVHLDTEAVNT 329
++ V + E+ D L E +S S+ PL+V LD +
Sbjct: 1328 GSDSTVDTTDDEDGEIVPMDISHNPAMSIDLNHALVLPETESRASVLPLQVSLDDSEASD 1387
Query: 330 AAGDTNGSSDIETSGLVDKKANXXXXXXXXXXXXXXISAAERRRLEGDKAPESVDEYEQW 509
D G + + + +KK+N ISA E R L+ D P++ DE+E+
Sbjct: 1388 QENDNEGQEISDRTEVDNKKSNKRLKEKARNQRELEISALEERTLQRD-IPQTPDEFEKL 1446
Query: 510 VRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREEDEKLNVWVA 665
VRSSPNSS+VWI YMA LL L +IDKAR VAERAL+TIN REE+EKLNVWVA
Sbjct: 1447 VRSSPNSSFVWINYMAFLLDLADIDKARAVAERALRTINIREEEEKLNVWVA 1498
>gb|EOY09615.1| RNA binding,RNA binding isoform 2 [Theobroma cacao]
Length = 1790
Score = 140 bits (354), Expect = 3e-31
Identities = 92/246 (37%), Positives = 139/246 (56%), Gaps = 25/246 (10%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
V ++++N G C LSD ++NI +Y G+KV AK+L++ E + + LGMKNS+L
Sbjct: 1379 VTLDHTNMVGLCHVSELSDDHVDNIQTKYRAGEKVTAKILKLDEERHR--ISLGMKNSYL 1436
Query: 183 SNEKGV----SQNVYQELHETD--------------FLETWDAAS----ECKSNTSICPL 296
+++ + ++ +++ ETD +E + AS + +S SI PL
Sbjct: 1437 TDDIDIQIPSNEESDEDVEETDDTRSRMLTDSTLGMAIEYENGASSICAQAESRASIPPL 1496
Query: 297 EVHLDT---EAVNTAAGDTNGSSDIETSGLVDKKANXXXXXXXXXXXXXXISAAERRRLE 467
EV LD ++ +S+ +G D+K I AAE R+LE
Sbjct: 1497 EVTLDDIEHSDMDILVSQNQANSNEAVTG--DEKNKRRAKKKAKEDREREIRAAEERQLE 1554
Query: 468 GDKAPESVDEYEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREEDEK 647
D P + DE+E+ VR+SPNSS+VWIKYMA +L+ +I+KAR +AERAL+TIN REE+EK
Sbjct: 1555 MD-VPRTADEFEKLVRNSPNSSFVWIKYMAFMLNSADIEKARAIAERALRTINIREENEK 1613
Query: 648 LNVWVA 665
LN+WVA
Sbjct: 1614 LNIWVA 1619
>gb|EOY09614.1| RNA binding,RNA binding isoform 1 [Theobroma cacao]
Length = 1824
Score = 140 bits (354), Expect = 3e-31
Identities = 92/246 (37%), Positives = 139/246 (56%), Gaps = 25/246 (10%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
V ++++N G C LSD ++NI +Y G+KV AK+L++ E + + LGMKNS+L
Sbjct: 1379 VTLDHTNMVGLCHVSELSDDHVDNIQTKYRAGEKVTAKILKLDEERHR--ISLGMKNSYL 1436
Query: 183 SNEKGV----SQNVYQELHETD--------------FLETWDAAS----ECKSNTSICPL 296
+++ + ++ +++ ETD +E + AS + +S SI PL
Sbjct: 1437 TDDIDIQIPSNEESDEDVEETDDTRSRMLTDSTLGMAIEYENGASSICAQAESRASIPPL 1496
Query: 297 EVHLDT---EAVNTAAGDTNGSSDIETSGLVDKKANXXXXXXXXXXXXXXISAAERRRLE 467
EV LD ++ +S+ +G D+K I AAE R+LE
Sbjct: 1497 EVTLDDIEHSDMDILVSQNQANSNEAVTG--DEKNKRRAKKKAKEDREREIRAAEERQLE 1554
Query: 468 GDKAPESVDEYEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREEDEK 647
D P + DE+E+ VR+SPNSS+VWIKYMA +L+ +I+KAR +AERAL+TIN REE+EK
Sbjct: 1555 MD-VPRTADEFEKLVRNSPNSSFVWIKYMAFMLNSADIEKARAIAERALRTINIREENEK 1613
Query: 648 LNVWVA 665
LN+WVA
Sbjct: 1614 LNIWVA 1619
>gb|EPS59007.1| hypothetical protein M569_15804, partial [Genlisea aurea]
Length = 1805
Score = 139 bits (350), Expect = 8e-31
Identities = 93/240 (38%), Positives = 132/240 (55%), Gaps = 19/240 (7%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
+ I+N+N G C +SD + Y +GQ V AKVL+V + + + LG+KNS++
Sbjct: 1366 ISIDNTNIVGLCHISEISDSYEEHPETNYAVGQIVSAKVLKVDKDRNR--VSLGLKNSYM 1423
Query: 183 SNEKGVSQNVYQELHETDFL-------ETWDAAS---------ECKSNTSICPLEVHLDT 314
++ ++ + QE F+ E+ + S E +S ++ PLEV LD
Sbjct: 1424 ETDEKLNTPMQQENDLAHFVNDSFLQVESMNGTSVYVPSPIPAEAESRATVPPLEVPLDE 1483
Query: 315 EAVNTAAGDTNGSSDIETSGL---VDKKANXXXXXXXXXXXXXXISAAERRRLEGDKAPE 485
A + IE +G VDK I AAE + LE D P+
Sbjct: 1484 FA--NLDSEVISDQRIEVAGAERNVDKDEKRVKKRARLEREIE-IRAAEEKLLEED-IPK 1539
Query: 486 SVDEYEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREEDEKLNVWVA 665
+ +EYE+ VR+SPNSS++WIKYMAH+LSL +++KAR VAERALQTINFREE EKLN+WVA
Sbjct: 1540 NAEEYEKLVRNSPNSSFMWIKYMAHMLSLADVEKARSVAERALQTINFREESEKLNIWVA 1599
>ref|XP_002884876.1| S1 RNA-binding domain-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297330716|gb|EFH61135.1| S1 RNA-binding
domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 1843
Score = 139 bits (349), Expect = 1e-30
Identities = 95/252 (37%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
+DI+ G C LSD +I N+ Y G+ V AK+L++ E +++ + LGMK+S+L
Sbjct: 1392 IDIDQIGMVGLCHITQLSDDRIENVQARYKAGESVSAKILKLDEEKRR--ISLGMKSSYL 1449
Query: 183 SNEKGV-----------------------SQNVYQELHETDFLETWDAA--------SEC 269
N V + V + + F ET ++
Sbjct: 1450 MNGDDVKAQPPSEEKADETSMECDPINDPNTEVLAAVGDFGFQETSGGRHSGASLVLAQV 1509
Query: 270 KSNTSICPLEVHLDTEAVNTAAGDTNGSSDIETSGLVDKKANXXXXXXXXXXXXXXISAA 449
S SI PLEV LD + D N + + D+K+ I AA
Sbjct: 1510 DSRASIPPLEVDLDD--IEEMDFDNNQNQEKLLGADKDEKSKRREKQKDKEEREKKIQAA 1567
Query: 450 ERRRLEGDKAPESVDEYEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINF 629
E R LE APES DE+E+ VRSSPNSS+VWIKYMA +LSL +I+KAR +AERAL+TIN
Sbjct: 1568 EGRLLE-HHAPESADEFEKLVRSSPNSSFVWIKYMAFMLSLADIEKARSIAERALRTINI 1626
Query: 630 REEDEKLNVWVA 665
REE+EKLN+WVA
Sbjct: 1627 REEEEKLNIWVA 1638
>ref|XP_006296818.1| hypothetical protein CARUB_v10012800mg [Capsella rubella]
gi|482565527|gb|EOA29716.1| hypothetical protein
CARUB_v10012800mg [Capsella rubella]
Length = 1789
Score = 137 bits (345), Expect = 3e-30
Identities = 94/253 (37%), Positives = 135/253 (53%), Gaps = 32/253 (12%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
+ I+ + +G C K LSD +I N+ +Y G++V AK+L++ E + + + LGMK+S+L
Sbjct: 1475 ITIDQTGMDGLCHKTQLSDDRIENVQAKYKAGERVTAKILKLDEEQGR--ISLGMKSSYL 1532
Query: 183 SNEK------------------------------GVSQNVYQELHETDFLETWDAASECK 272
++ V +QE+ T ++ +
Sbjct: 1533 TSGDVETQPPSENNANDASMECDSINDPKSEVLAAVGDFGFQEISGGRHSGTSVVLAQVE 1592
Query: 273 SNTSICPLEVHLDT-EAVNTAAGDTNGSSDIETSGLV-DKKANXXXXXXXXXXXXXXISA 446
S SI LEV LD E ++ NG + + G+ D+K+ I A
Sbjct: 1593 SRASIPALEVDLDDIEEMDI----DNGQNQEKLQGVNRDEKSKRREKQKDREEREKRIQA 1648
Query: 447 AERRRLEGDKAPESVDEYEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTIN 626
AE R LE + APES DE+E+ VRSSPNSS+VWIKYMA +LSL +I+KAR +AERAL TIN
Sbjct: 1649 AEGRLLE-NHAPESADEFEKLVRSSPNSSFVWIKYMAFMLSLADIEKARSIAERALSTIN 1707
Query: 627 FREEDEKLNVWVA 665
REE+EKLN+WVA
Sbjct: 1708 IREEEEKLNIWVA 1720
>dbj|BAC79783.2| putative pre-rRNA processing protein RRP5 [Oryza sativa Japonica
Group] gi|50508626|dbj|BAD31015.1| putative pre-rRNA
processing protein RRP5 [Oryza sativa Japonica Group]
Length = 1668
Score = 135 bits (341), Expect = 8e-30
Identities = 87/236 (36%), Positives = 124/236 (52%), Gaps = 15/236 (6%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
V I+ S C LSD+ + +I + + G KV+AK+L++ E + + +GMK S++
Sbjct: 1233 VTIQGSELVALCHVSELSDEPVLDIHSCHKAGDKVKAKILKIDEERHR--VSIGMKKSYI 1290
Query: 183 SNE---------------KGVSQNVYQELHETDFLETWDAASECKSNTSICPLEVHLDTE 317
+ + +S+N L + +S S+ PL+V LD
Sbjct: 1291 GPDSTGDTSDDEDDEIVPEEISRNPVMGRDRNHAL----VLPKPESRASVLPLQVSLDES 1346
Query: 318 AVNTAAGDTNGSSDIETSGLVDKKANXXXXXXXXXXXXXXISAAERRRLEGDKAPESVDE 497
+ D G + + DKK+N ISA E R L+ D P++ DE
Sbjct: 1347 EGSDQENDNKGQEIANGTEVDDKKSNKRLKEKARKQRELEISALEERALQRD-IPQTPDE 1405
Query: 498 YEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREEDEKLNVWVA 665
+E+ VRSSPNSS+VWI YMA LL L ++DKAR VAERAL+TIN REE+EKLNVWVA
Sbjct: 1406 FEKLVRSSPNSSFVWINYMAFLLDLADVDKARAVAERALRTINIREEEEKLNVWVA 1461
>ref|NP_001059139.1| Os07g0203300 [Oryza sativa Japonica Group]
gi|113610675|dbj|BAF21053.1| Os07g0203300, partial
[Oryza sativa Japonica Group]
Length = 689
Score = 135 bits (341), Expect = 8e-30
Identities = 87/236 (36%), Positives = 124/236 (52%), Gaps = 15/236 (6%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
V I+ S C LSD+ + +I + + G KV+AK+L++ E + + +GMK S++
Sbjct: 254 VTIQGSELVALCHVSELSDEPVLDIHSCHKAGDKVKAKILKIDEERHR--VSIGMKKSYI 311
Query: 183 SNE---------------KGVSQNVYQELHETDFLETWDAASECKSNTSICPLEVHLDTE 317
+ + +S+N L + +S S+ PL+V LD
Sbjct: 312 GPDSTGDTSDDEDDEIVPEEISRNPVMGRDRNHAL----VLPKPESRASVLPLQVSLDES 367
Query: 318 AVNTAAGDTNGSSDIETSGLVDKKANXXXXXXXXXXXXXXISAAERRRLEGDKAPESVDE 497
+ D G + + DKK+N ISA E R L+ D P++ DE
Sbjct: 368 EGSDQENDNKGQEIANGTEVDDKKSNKRLKEKARKQRELEISALEERALQRD-IPQTPDE 426
Query: 498 YEQWVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREEDEKLNVWVA 665
+E+ VRSSPNSS+VWI YMA LL L ++DKAR VAERAL+TIN REE+EKLNVWVA
Sbjct: 427 FEKLVRSSPNSSFVWINYMAFLLDLADVDKARAVAERALRTINIREEEEKLNVWVA 482
>ref|XP_003563778.1| PREDICTED: protein RRP5 homolog [Brachypodium distachyon]
Length = 1668
Score = 135 bits (340), Expect = 1e-29
Identities = 85/233 (36%), Positives = 126/233 (54%), Gaps = 12/233 (5%)
Frame = +3
Query: 3 VDIENSNKEGFCKKKNLSDQKINNIFNEYFIGQKVRAKVLQVKEGEKKCCLLLGMKNSFL 182
V I++S G C LSD+ + +I + Y G V+AK+L++ E ++ + LGMK S+
Sbjct: 1232 VTIQSSELVGLCHVSELSDEPVLDINSCYKAGDMVKAKILKIDEERRR--VSLGMKKSYF 1289
Query: 183 ------------SNEKGVSQNVYQELHETDFLETWDAASECKSNTSICPLEVHLDTEAVN 326
+++ V ++ + L + E + S+ PL+V LD +
Sbjct: 1290 VSGLTDGINDDDDDDERVPMDINHVPEMSSDLNSALVVPEPEPRASVLPLQVSLDEYEGS 1349
Query: 327 TAAGDTNGSSDIETSGLVDKKANXXXXXXXXXXXXXXISAAERRRLEGDKAPESVDEYEQ 506
D G +G + +K++ ISA E R L+ D P++ DE+E+
Sbjct: 1350 DQDSDDKGPKIANGTGSIVQKSDKRLKEKARKQRELDISALEERALQKD-IPKTPDEFEK 1408
Query: 507 WVRSSPNSSYVWIKYMAHLLSLTEIDKAREVAERALQTINFREEDEKLNVWVA 665
VRSSPNSS+VWI YMA LL L +++KAR VAERAL+TIN REE+EKLNVWVA
Sbjct: 1409 LVRSSPNSSFVWINYMAFLLDLADVEKARSVAERALRTINMREEEEKLNVWVA 1461