BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00017120
         (1563 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001775171.1| predicted protein [Physcomitrella patens] gi...   126   3e-26
ref|XP_001782576.1| predicted protein [Physcomitrella patens] gi...   118   6e-24
gb|EJY79714.1| UBA/TS-N domain containing protein [Oxytricha tri...    79   5e-12

>ref|XP_001775171.1| predicted protein [Physcomitrella patens] gi|162673510|gb|EDQ60032.1|
            predicted protein [Physcomitrella patens]
          Length = 1110

 Score =  126 bits (316), Expect = 3e-26
 Identities = 83/266 (31%), Positives = 149/266 (56%), Gaps = 20/266 (7%)
 Frame = -2

Query: 830  NGENVFTDMLVYVCRSLRELRQRCVVCKKRIP-TLSPLFFCDAEFCLYQFEEERMGVSLL 654
            N +N F  + + +C  LR L  RC++C K++  +++ +  CD + CLY+FEE  +GVS+L
Sbjct: 365  NNKNPFIGLALAICHQLRLLPGRCLICWKKLSCSVTRMRTCDEDLCLYRFEELGLGVSVL 424

Query: 653  QELQNT-KLARFLIATALEASISARDVFEPFPPFLLKKKEIRKRSGFFS-EVMKINKNKA 480
             E++++ +L    ++ A  A  SARDVFEPFP FLL+ KEIR RSG+FS + ++ + +K 
Sbjct: 425  DEVKSSPELVEVELSLAHTALESARDVFEPFPAFLLQDKEIRGRSGWFSNDTVRESASKL 484

Query: 479  TSDS----NNATHCNKDYKVNSNKDMELLKKLIEAFPPIEEMQNCSSEIELIFKLGKPWC 312
            T+ +    ++    ++   + SNK+ ELL++++ + PPI+++Q C+ E  L   L + W 
Sbjct: 485  TNLTQKMWDDLEDMDESEPLKSNKNSELLREILASIPPIDKIQKCADERSLKKVLTRSWY 544

Query: 311  -------------DPNTSSHSNTSSKEEESGKLTSNAESVSSKEFFKVEKLWDDKQWLPY 171
                          P  +  S   ++   S +    ++   S+   ++ ++W     + Y
Sbjct: 545  CYLYDGYKRAPHGGPVVAQVSPEMAEANPSPRPMHRSQLGGSQA--EMVEVWRKVAKMAY 602

Query: 170  NLLRFILFTNRLLMRPLPIDVELPVP 93
            +++RFIL TNRL +  L  + E+  P
Sbjct: 603  DVMRFILMTNRLSLYRLRSEEEVLQP 628


>ref|XP_001782576.1| predicted protein [Physcomitrella patens] gi|162665896|gb|EDQ52565.1|
            predicted protein [Physcomitrella patens]
          Length = 939

 Score =  118 bits (296), Expect = 6e-24
 Identities = 125/514 (24%), Positives = 214/514 (41%), Gaps = 67/514 (13%)
 Frame = -2

Query: 1400 VYRLALEAKKKCDYALLDTKTDMEDNLLAWCSVSVDAHRHAVSLGIDFRGILFDSRKFST 1221
            +Y  + +A+K+C+     T  D++ N L W SV        V L  D  GI+ D  + + 
Sbjct: 199  LYAFSEDARKQCEACKAQTLGDLQ-NPLMWLSVVSKPKVLVVELQFDLVGIIDD--RVAA 255

Query: 1220 ALGFPFDGSELIIEINLADGEWVASAIQEDFMKFTEIRCYVKEPVDVLKRKGDEMVEEDL 1041
             LG   +   + + +  +   W  + +Q     +TE  C                     
Sbjct: 256  GLGLSIN-EHVSLSLEFSKNTWSETTLQ-----WTEFEC--------------------- 288

Query: 1040 HCVKENLKKKRSNKDEIVLIMKQDAKKCAEREAQLKTMGVILRT---LQRQNFGARVVVP 870
                +N+             + QD+K    R+ +   +   L +      +++G  V+ P
Sbjct: 289  ----QNIT------------VSQDSKLIEARDTERDEIDRYLESSFGAGHRSYGLDVLFP 332

Query: 869  EMIKEF----------KKGKAWW--------NGENVFTDMLVYVCRSLRELRQRCVVCKK 744
            ++ ++F          + G   +        N +N F  + + +   L+ L Q C++C +
Sbjct: 333  DLTRKFFAALNHHGSAQTGNYQYMEGIDENLNNKNPFLGLALAISHQLKRLPQCCIICWR 392

Query: 743  RIP-TLSPLFFCDAEFCLYQFEEERMGVSLLQELQNT-KLARFLIATALEASISARDVFE 570
              P +++ +  CD++ CL+ FEE  +GVS+L E++++ +L    +A A  A  S RDVFE
Sbjct: 393  EHPFSVTRMRTCDSDLCLHLFEELGLGVSVLGEVKSSPELVEMEMAFAAAALRSKRDVFE 452

Query: 569  PFPPFLLKKKEIRKRSGFFSEVMKINKNKATSDSNNATHCNKDYK-------------VN 429
            PFP F L+K E+R RSG+FS     N N + + S +       Y+             V 
Sbjct: 453  PFPAFSLQKDELRLRSGWFS-----NNNMSETASRSKNRIKTAYQMPILGAVEDEKSAVQ 507

Query: 428  SNKDMELLKKLIEAFPPIEEMQNCSSEIELIFKLGKPW----------------CDPNTS 297
            SNK+ + L + + + PPI  +Q C+ E  L   L + W                  P TS
Sbjct: 508  SNKNTKQLSEALASIPPINVLQKCADERSLKRVLARAWYSHYHEGVERAPHEGSVPPRTS 567

Query: 296  SHSNTSSKEEESGKLTSNAESVSSKEFFKVEKL--WDDKQWLPYNLLRFILFTNR----- 138
              ++T +       L S     S    F+ EK+  W     L Y+L+RFIL TNR     
Sbjct: 568  HGAHTDAAPT---PLLSPLMKKSRSPRFETEKMEPWRKVANLAYDLMRFILTTNRGSICQ 624

Query: 137  -------LLMRPLPIDVELPVPS-YFQFAIIYDA 60
                   L +   P   + P  S  +QF +++D+
Sbjct: 625  VFGEDEVLKVERSPKSKDAPGESGIYQFVVLHDS 658


>gb|EJY79714.1| UBA/TS-N domain containing protein [Oxytricha trifallax]
          Length = 1088

 Score = 79.0 bits (193), Expect = 5e-12
 Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 9/234 (3%)
 Frame = -2

Query: 881  VVVPEMIKEFKKGKAWWN---GENVFTDMLVYVCRSLRELRQRCVVCKKRIPTLS-PLFF 714
            ++ P ++K   K  +  N    +N    M++Y+C  L +  + C++C  ++ T S  L  
Sbjct: 449  LIEPSLVKRASKDYSIMNLPHTKNQLVRMMLYICDRLDKSTRYCILCHNQLETESIKLRA 508

Query: 713  CDAEFCLYQFEEERMGVSLLQELQNTKLARFL-IATALEASISAR--DVFEPFPPFLLKK 543
            C +E C + FEE   G ++  EL+  +   FL I+ A +A  S R   VFEPFP F L  
Sbjct: 509  CTSEHCEFIFEEN-FGGTIFPELKYNQHEAFLNISLAAKALFSTRAGSVFEPFPTFFLIS 567

Query: 542  KEIRKRSGFFSEVMKINKNKATSDSNNATHCNKDYKVN-SNKDMELLKKLIEAFPP-IEE 369
             E+R + G    +      KA  + N     NKD+ VN  NKD+  + ++ +  PP +  
Sbjct: 568  NELRTKRGNLDVI-----QKARIEGNQV---NKDHMVNEKNKDLAKMLEIFQKIPPYMTL 619

Query: 368  MQNCSSEIELIFKLGKPWCDPNTSSHSNTSSKEEESGKLTSNAESVSSKEFFKV 207
            M++ +SE +LI KL       NT   + T ++  +S K+ S   + +   F K+
Sbjct: 620  MKDVNSEADLICKL-------NTIYKNETQAR--QSYKMLSYILATNRSTFVKL 664