BLASTX nr result
ID: Ephedra28_contig00017078
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00017078
(399 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK22775.1| unknown [Picea sitchensis] 77 2e-12
ref|XP_002519079.1| conserved hypothetical protein [Ricinus comm... 73 3e-11
ref|XP_004148855.1| PREDICTED: mediator of RNA polymerase II tra... 71 2e-10
ref|NP_001143427.1| hypothetical protein [Zea mays] gi|195620368... 70 2e-10
gb|AAK43496.1|AC020666_6 hypothetical protein [Oryza sativa Japo... 70 3e-10
ref|NP_001065304.2| Os10g0548400 [Oryza sativa Japonica Group] g... 70 3e-10
gb|EXB51014.1| hypothetical protein L484_023716 [Morus notabilis] 70 4e-10
ref|XP_004500820.1| PREDICTED: mediator of RNA polymerase II tra... 70 4e-10
ref|XP_006842105.1| hypothetical protein AMTR_s00078p00090230 [A... 69 5e-10
ref|XP_002305420.1| hypothetical protein POPTR_0004s16010g [Popu... 69 5e-10
ref|XP_003571727.1| PREDICTED: uncharacterized protein LOC100842... 69 6e-10
ref|XP_002440780.1| hypothetical protein SORBIDRAFT_09g006450 [S... 69 6e-10
ref|XP_003603888.1| hypothetical protein MTR_3g116260 [Medicago ... 69 6e-10
ref|XP_006662028.1| PREDICTED: mediator of RNA polymerase II tra... 69 8e-10
ref|XP_004299104.1| PREDICTED: mediator of RNA polymerase II tra... 69 8e-10
ref|XP_006423219.1| hypothetical protein CICLE_v10029521mg [Citr... 68 1e-09
gb|EOX98585.1| MED32, putative [Theobroma cacao] 68 1e-09
ref|XP_003631633.1| PREDICTED: uncharacterized protein LOC100852... 68 1e-09
emb|CAN70933.1| hypothetical protein VITISV_032482 [Vitis vinifera] 68 1e-09
gb|EMS52054.1| hypothetical protein TRIUR3_29765 [Triticum urartu] 67 2e-09
>gb|ABK22775.1| unknown [Picea sitchensis]
Length = 164
Score = 77.0 bits (188), Expect = 2e-12
Identities = 40/53 (75%), Positives = 45/53 (84%), Gaps = 5/53 (9%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGTHNS-----LVSIPPISAVKLEQMSKAVRWLVIDLQ 256
+RQRIGSECLVDEATGG+ ++ V IPPISAV+LEQMSKAVRWLVIDLQ
Sbjct: 65 VRQRIGSECLVDEATGGSSSARAGQTAVGIPPISAVRLEQMSKAVRWLVIDLQ 117
>ref|XP_002519079.1| conserved hypothetical protein [Ricinus communis]
gi|223541742|gb|EEF43290.1| conserved hypothetical
protein [Ricinus communis]
Length = 116
Score = 73.2 bits (178), Expect = 3e-11
Identities = 37/49 (75%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGG-THNSLVSIPPISAVKLEQMSKAVRWLVIDLQ 256
++QRIGSECLVDEATG T S +PPISAV+LEQMSKAVRWLVI+LQ
Sbjct: 40 VKQRIGSECLVDEATGSMTGKSTTGLPPISAVRLEQMSKAVRWLVIELQ 88
>ref|XP_004148855.1| PREDICTED: mediator of RNA polymerase II transcription subunit
32-like [Cucumis sativus]
gi|449515353|ref|XP_004164714.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 32-like [Cucumis
sativus]
Length = 146
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/53 (67%), Positives = 43/53 (81%), Gaps = 5/53 (9%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGT-----HNSLVSIPPISAVKLEQMSKAVRWLVIDLQ 256
++QRIGSECLVDEATG ++ S+PPISAV+LEQMSKAVRWLVI+LQ
Sbjct: 65 VKQRIGSECLVDEATGSLAGKSGQSATTSLPPISAVRLEQMSKAVRWLVIELQ 117
>ref|NP_001143427.1| hypothetical protein [Zea mays] gi|195620368|gb|ACG32014.1|
hypothetical protein [Zea mays]
gi|195652821|gb|ACG45878.1| hypothetical protein [Zea
mays] gi|224034555|gb|ACN36353.1| unknown [Zea mays]
gi|413944785|gb|AFW77434.1| hypothetical protein
ZEAMMB73_706991 [Zea mays] gi|413944786|gb|AFW77435.1|
hypothetical protein ZEAMMB73_706991 [Zea mays]
Length = 147
Score = 70.5 bits (171), Expect = 2e-10
Identities = 37/51 (72%), Positives = 41/51 (80%), Gaps = 3/51 (5%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGTHNSLVSIP---PISAVKLEQMSKAVRWLVIDLQ 256
+RQRIGSECLVDEATG V+ P PISAV+LEQMSKAVRWLVI+LQ
Sbjct: 66 IRQRIGSECLVDEATGSASAGSVAAPGIKPISAVRLEQMSKAVRWLVIELQ 116
>gb|AAK43496.1|AC020666_6 hypothetical protein [Oryza sativa Japonica Group]
gi|31433385|gb|AAP54904.1| expressed protein [Oryza
sativa Japonica Group] gi|125532860|gb|EAY79425.1|
hypothetical protein OsI_34558 [Oryza sativa Indica
Group]
Length = 160
Score = 70.1 bits (170), Expect = 3e-10
Identities = 37/53 (69%), Positives = 43/53 (81%), Gaps = 5/53 (9%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGTHNSLVS-----IPPISAVKLEQMSKAVRWLVIDLQ 256
+RQRIGSECLVDEATG + +S + I PISAV+LEQMSKAVRWLVI+LQ
Sbjct: 65 IRQRIGSECLVDEATGASSSSSAALAAPGIKPISAVRLEQMSKAVRWLVIELQ 117
>ref|NP_001065304.2| Os10g0548400 [Oryza sativa Japonica Group]
gi|255679603|dbj|BAF27141.2| Os10g0548400 [Oryza sativa
Japonica Group]
Length = 192
Score = 70.1 bits (170), Expect = 3e-10
Identities = 37/53 (69%), Positives = 43/53 (81%), Gaps = 5/53 (9%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGTHNSLVS-----IPPISAVKLEQMSKAVRWLVIDLQ 256
+RQRIGSECLVDEATG + +S + I PISAV+LEQMSKAVRWLVI+LQ
Sbjct: 65 IRQRIGSECLVDEATGASSSSSAALAAPGIKPISAVRLEQMSKAVRWLVIELQ 117
>gb|EXB51014.1| hypothetical protein L484_023716 [Morus notabilis]
Length = 209
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/53 (67%), Positives = 41/53 (77%), Gaps = 5/53 (9%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGTHN-----SLVSIPPISAVKLEQMSKAVRWLVIDLQ 256
++QRIGSECLVDEATG S +PPISAV+LEQMSKAVRWLVI+LQ
Sbjct: 127 VKQRIGSECLVDEATGSVAGKSGQPSATDLPPISAVRLEQMSKAVRWLVIELQ 179
>ref|XP_004500820.1| PREDICTED: mediator of RNA polymerase II transcription subunit
32-like [Cicer arietinum]
Length = 146
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 5/53 (9%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGTHN-----SLVSIPPISAVKLEQMSKAVRWLVIDLQ 256
++QRIGSECLVDEATG +L +PPISAV+LEQMSKAVRWLVI+LQ
Sbjct: 65 VKQRIGSECLVDEATGHVAGKPGQATLTGLPPISAVRLEQMSKAVRWLVIELQ 117
>ref|XP_006842105.1| hypothetical protein AMTR_s00078p00090230 [Amborella trichopoda]
gi|548844154|gb|ERN03780.1| hypothetical protein
AMTR_s00078p00090230 [Amborella trichopoda]
Length = 148
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/53 (67%), Positives = 43/53 (81%), Gaps = 5/53 (9%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGTHNSL-----VSIPPISAVKLEQMSKAVRWLVIDLQ 256
++QR+GSECLVDEATG +L S+PPISAV+LEQMSKAVRWLVI+LQ
Sbjct: 65 VKQRVGSECLVDEATGPAPANLRSSQAPSLPPISAVRLEQMSKAVRWLVIELQ 117
>ref|XP_002305420.1| hypothetical protein POPTR_0004s16010g [Populus trichocarpa]
gi|222848384|gb|EEE85931.1| hypothetical protein
POPTR_0004s16010g [Populus trichocarpa]
Length = 146
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/53 (64%), Positives = 41/53 (77%), Gaps = 5/53 (9%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGT-----HNSLVSIPPISAVKLEQMSKAVRWLVIDLQ 256
++QR+GSECLVDEATG + +PPISAV+LEQMSKAVRWLVI+LQ
Sbjct: 65 VKQRVGSECLVDEATGSVSGRSGQGGVTGLPPISAVRLEQMSKAVRWLVIELQ 117
>ref|XP_003571727.1| PREDICTED: uncharacterized protein LOC100842454 [Brachypodium
distachyon]
Length = 163
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/55 (67%), Positives = 43/55 (78%), Gaps = 7/55 (12%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGTHNSLVS-------IPPISAVKLEQMSKAVRWLVIDLQ 256
+RQRIGSECLVDEATG + ++ S I PISAV+LEQMSKAVRWLVI+LQ
Sbjct: 65 IRQRIGSECLVDEATGSSSSAPASAALAAPGIKPISAVRLEQMSKAVRWLVIELQ 119
>ref|XP_002440780.1| hypothetical protein SORBIDRAFT_09g006450 [Sorghum bicolor]
gi|241946065|gb|EES19210.1| hypothetical protein
SORBIDRAFT_09g006450 [Sorghum bicolor]
Length = 147
Score = 68.9 bits (167), Expect = 6e-10
Identities = 36/51 (70%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGTHNSLVSIP---PISAVKLEQMSKAVRWLVIDLQ 256
+RQRIGSECLVDEATG + P PISAV+LEQMSKAVRWLVI+LQ
Sbjct: 66 IRQRIGSECLVDEATGSASAGSAAAPGIKPISAVRLEQMSKAVRWLVIELQ 116
>ref|XP_003603888.1| hypothetical protein MTR_3g116260 [Medicago truncatula]
gi|355492936|gb|AES74139.1| hypothetical protein
MTR_3g116260 [Medicago truncatula]
gi|388497008|gb|AFK36570.1| unknown [Medicago
truncatula]
Length = 148
Score = 68.9 bits (167), Expect = 6e-10
Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 5/53 (9%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGTHN-----SLVSIPPISAVKLEQMSKAVRWLVIDLQ 256
++QRIGSECLVDEATG ++ +PPISAV+LEQMSKAVRWLVI+LQ
Sbjct: 65 VKQRIGSECLVDEATGHVAGKPGQATMTGLPPISAVRLEQMSKAVRWLVIELQ 117
>ref|XP_006662028.1| PREDICTED: mediator of RNA polymerase II transcription subunit
32-like [Oryza brachyantha]
Length = 166
Score = 68.6 bits (166), Expect = 8e-10
Identities = 38/59 (64%), Positives = 43/59 (72%), Gaps = 11/59 (18%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGTHNSLVSIP-----------PISAVKLEQMSKAVRWLVIDLQ 256
+RQRIGSECLVDEATG + +S S P PISAV+LEQMSKAVRWLVI+LQ
Sbjct: 65 IRQRIGSECLVDEATGASSSSSPSNPSSAALAAPGIKPISAVRLEQMSKAVRWLVIELQ 123
>ref|XP_004299104.1| PREDICTED: mediator of RNA polymerase II transcription subunit
32-like isoform 1 [Fragaria vesca subsp. vesca]
gi|470126255|ref|XP_004299105.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 32-like isoform
2 [Fragaria vesca subsp. vesca]
Length = 145
Score = 68.6 bits (166), Expect = 8e-10
Identities = 35/53 (66%), Positives = 41/53 (77%), Gaps = 5/53 (9%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGT-----HNSLVSIPPISAVKLEQMSKAVRWLVIDLQ 256
++QRIGSECLVDEATG + +PPISAV+LEQMSKAVRWLVI+LQ
Sbjct: 65 VKQRIGSECLVDEATGPVVGKSGQTTTTGLPPISAVRLEQMSKAVRWLVIELQ 117
>ref|XP_006423219.1| hypothetical protein CICLE_v10029521mg [Citrus clementina]
gi|567861132|ref|XP_006423220.1| hypothetical protein
CICLE_v10029521mg [Citrus clementina]
gi|568867716|ref|XP_006487179.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 32-like [Citrus
sinensis] gi|557525153|gb|ESR36459.1| hypothetical
protein CICLE_v10029521mg [Citrus clementina]
gi|557525154|gb|ESR36460.1| hypothetical protein
CICLE_v10029521mg [Citrus clementina]
Length = 144
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/53 (66%), Positives = 41/53 (77%), Gaps = 5/53 (9%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGTHN-----SLVSIPPISAVKLEQMSKAVRWLVIDLQ 256
++QRIGSECLVDEATG + +PPISAV+LEQMSKAVRWLVI+LQ
Sbjct: 65 VKQRIGSECLVDEATGSLAGKSGQAATTGLPPISAVRLEQMSKAVRWLVIELQ 117
>gb|EOX98585.1| MED32, putative [Theobroma cacao]
Length = 186
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 5/53 (9%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGTHNS-----LVSIPPISAVKLEQMSKAVRWLVIDLQ 256
++QRIGSECLVDEATG +PPISAV+LEQMSKAVRWLVI+LQ
Sbjct: 106 IKQRIGSECLVDEATGSMAGKSGQALTTGLPPISAVRLEQMSKAVRWLVIELQ 158
>ref|XP_003631633.1| PREDICTED: uncharacterized protein LOC100852787 [Vitis vinifera]
Length = 145
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 5/53 (9%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGTHNS-----LVSIPPISAVKLEQMSKAVRWLVIDLQ 256
++QRIGSECLVDEATG +PPISAV+LEQMSKAVRWLVI+LQ
Sbjct: 65 VKQRIGSECLVDEATGSVAGKPGQAVTAGLPPISAVRLEQMSKAVRWLVIELQ 117
>emb|CAN70933.1| hypothetical protein VITISV_032482 [Vitis vinifera]
Length = 145
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 5/53 (9%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGTHNS-----LVSIPPISAVKLEQMSKAVRWLVIDLQ 256
++QRIGSECLVDEATG +PPISAV+LEQMSKAVRWLVI+LQ
Sbjct: 65 VKQRIGSECLVDEATGSVAGKPGQAVTTGLPPISAVRLEQMSKAVRWLVIELQ 117
>gb|EMS52054.1| hypothetical protein TRIUR3_29765 [Triticum urartu]
Length = 162
Score = 67.0 bits (162), Expect = 2e-09
Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 9/57 (15%)
Frame = -1
Query: 399 LRQRIGSECLVDEATGGTHNSLV---------SIPPISAVKLEQMSKAVRWLVIDLQ 256
+RQRIGSECLVDEATG + ++ I PISAV+LEQMSKAVRWLVI+LQ
Sbjct: 65 IRQRIGSECLVDEATGSSSSASTPASVALAAPGIKPISAVRLEQMSKAVRWLVIELQ 121