BLASTX nr result
ID: Ephedra28_contig00017034
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00017034
(486 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002332393.1| predicted protein [Populus trichocarpa] 97 3e-18
ref|XP_002331994.1| predicted protein [Populus trichocarpa] gi|5... 94 1e-17
gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus pe... 94 2e-17
ref|XP_006373437.1| hypothetical protein POPTR_0017s137702g, par... 92 7e-17
ref|XP_002333403.1| predicted protein [Populus trichocarpa] 92 7e-17
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 92 9e-17
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 92 9e-17
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 91 2e-16
gb|ABD96891.1| hypothetical protein [Cleome spinosa] 90 3e-16
ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu... 89 5e-16
emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera] 89 5e-16
gb|EXB77631.1| DNA-directed RNA polymerase 2 [Morus notabilis] 89 6e-16
ref|XP_004297187.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 89 8e-16
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 89 8e-16
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 88 1e-15
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 88 1e-15
gb|EOY31498.1| DNA/RNA polymerases superfamily protein isoform 3... 88 1e-15
gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2... 88 1e-15
gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1... 88 1e-15
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 87 2e-15
>ref|XP_002332393.1| predicted protein [Populus trichocarpa]
Length = 173
Score = 96.7 bits (239), Expect = 3e-18
Identities = 52/112 (46%), Positives = 67/112 (59%)
Frame = +2
Query: 149 RASVSTALEPLVSSEDEVKDFFPHKAATVTESLRLEEQIKQXXXXXXXXXXXXKEGCLRR 328
RA ST +E VS DEV++ P E + EE ++ K LRR
Sbjct: 54 RALSSTDVEDNVSGADEVQELQP-------EMRKEEEHFRRRRLRANPGIGSRKHRVLRR 106
Query: 329 RQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAID 484
RQV+ E EAW AT+EYKEL ++MC N+APNLPY+KSLFLGWF+P +AI+
Sbjct: 107 RQVKIEAEAWELATKEYKELLKDMCEHNLAPNLPYMKSLFLGWFEPFTDAIE 158
>ref|XP_002331994.1| predicted protein [Populus trichocarpa]
gi|566259328|ref|XP_006389224.1| hypothetical protein
POPTR_0035s00410g [Populus trichocarpa]
gi|550311935|gb|ERP48138.1| hypothetical protein
POPTR_0035s00410g [Populus trichocarpa]
Length = 381
Score = 94.4 bits (233), Expect = 1e-17
Identities = 52/114 (45%), Positives = 66/114 (57%)
Frame = +2
Query: 140 NVFRASVSTALEPLVSSEDEVKDFFPHKAATVTESLRLEEQIKQXXXXXXXXXXXXKEGC 319
+V A ST +E VS DEV++ P E + EE + K
Sbjct: 32 SVAEALSSTDVEDNVSGADEVQELQP-------EMRKEEEHFSRRRLRANPGIGSRKHRV 84
Query: 320 LRRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 481
LRRRQV+ E EAW AT+EYKEL ++MC +APNLPY+KSLFLGWF+P R+AI
Sbjct: 85 LRRRQVKIEAEAWELATKEYKELLKDMCEHKLAPNLPYMKSLFLGWFEPFRDAI 138
>gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
Length = 1024
Score = 94.0 bits (232), Expect = 2e-17
Identities = 49/115 (42%), Positives = 69/115 (60%)
Frame = +2
Query: 140 NVFRASVSTALEPLVSSEDEVKDFFPHKAATVTESLRLEEQIKQXXXXXXXXXXXXKEGC 319
+V A ST +E VS DEV++ + + +++ +Q K
Sbjct: 132 SVAEAVSSTDVEEEVSVVDEVQELLQQMSIEEKREAQYKQRTRQNRARGMGQG---KYHM 188
Query: 320 LRRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAID 484
L+RRQ++ ETEAW +A +EY+EL +MC +APNLPY+KSLFLGWF+PLRNAID
Sbjct: 189 LKRRQIKIETEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAID 243
>ref|XP_006373437.1| hypothetical protein POPTR_0017s137702g, partial [Populus
trichocarpa] gi|550320259|gb|ERP51234.1| hypothetical
protein POPTR_0017s137702g, partial [Populus
trichocarpa]
Length = 622
Score = 92.0 bits (227), Expect = 7e-17
Identities = 51/114 (44%), Positives = 65/114 (57%)
Frame = +2
Query: 140 NVFRASVSTALEPLVSSEDEVKDFFPHKAATVTESLRLEEQIKQXXXXXXXXXXXXKEGC 319
+V A ST +E VS DEV++ P E + EE + K
Sbjct: 30 SVAEALSSTDVEDNVSGADEVQELQP-------EMRKEEEHFSRRRLRANPGIGSRKHRV 82
Query: 320 LRRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 481
LRRRQV+ E EAW AT+EYKEL ++MC +APNLPY+KSLFLGWF+P +AI
Sbjct: 83 LRRRQVKIEAEAWELATKEYKELLKDMCEHKLAPNLPYMKSLFLGWFEPFTDAI 136
>ref|XP_002333403.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 92.0 bits (227), Expect = 7e-17
Identities = 51/114 (44%), Positives = 65/114 (57%)
Frame = +2
Query: 140 NVFRASVSTALEPLVSSEDEVKDFFPHKAATVTESLRLEEQIKQXXXXXXXXXXXXKEGC 319
+V A ST +E VS DEV++ P E + EE + K
Sbjct: 30 SVAEALSSTDVEDNVSGADEVQELQP-------EMRKEEEHFSRRRLRANPGIGSRKHRV 82
Query: 320 LRRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 481
LRRRQV+ E EAW AT+EYKEL ++MC +APNLPY+KSLFLGWF+P +AI
Sbjct: 83 LRRRQVKIEAEAWELATKEYKELLKDMCEHKLAPNLPYMKSLFLGWFEPFTDAI 136
>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Cucumis sativus]
Length = 975
Score = 91.7 bits (226), Expect = 9e-17
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = +2
Query: 308 KEGCLRRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAID 484
K LRRRQ++ ETEAW K EEYKEL EMC +APNLPYVK LFLGWF+PL+NAI+
Sbjct: 139 KYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKKLFLGWFEPLKNAIE 197
>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Cucumis sativus]
Length = 975
Score = 91.7 bits (226), Expect = 9e-17
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = +2
Query: 308 KEGCLRRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAID 484
K LRRRQ++ ETEAW K EEYKEL EMC +APNLPYVK LFLGWF+PL+NAI+
Sbjct: 139 KYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKKLFLGWFEPLKNAIE 197
>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
vinifera]
Length = 979
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/57 (68%), Positives = 46/57 (80%)
Frame = +2
Query: 314 GCLRRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAID 484
G LRRRQV+ ETEAW + EEY+E+ EMC +APNLPYVK+LFLGWF+PLR AID
Sbjct: 144 GLLRRRQVKAETEAWERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFEPLREAID 200
>gb|ABD96891.1| hypothetical protein [Cleome spinosa]
Length = 1021
Score = 90.1 bits (222), Expect = 3e-16
Identities = 50/114 (43%), Positives = 63/114 (55%)
Frame = +2
Query: 140 NVFRASVSTALEPLVSSEDEVKDFFPHKAATVTESLRLEEQIKQXXXXXXXXXXXXKEGC 319
N A ST +E S DEV++ E + + +++ K
Sbjct: 135 NAAEAVSSTDIEEDASVVDEVQELLREMKK---EEKKEKVHLRRVKRQEDLGMLEKKYQS 191
Query: 320 LRRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 481
L+RRQV+ ETEAW KA EYKEL +MC +APNLPYVKSLFLGWF+PLR AI
Sbjct: 192 LKRRQVKIETEAWEKAANEYKELLTDMCEQKLAPNLPYVKSLFLGWFEPLREAI 245
>ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa]
gi|550332836|gb|EEE88785.2| hypothetical protein
POPTR_0008s11200g [Populus trichocarpa]
Length = 988
Score = 89.4 bits (220), Expect = 5e-16
Identities = 47/117 (40%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Frame = +2
Query: 146 FRASVSTALEPLVSSEDEV----KDFFPHKAATVTESL-RLEEQIKQXXXXXXXXXXXXK 310
F+ + A ++ S DE D F V + ++E Q + K
Sbjct: 82 FKGYATAAAADVIPSNDESDLSGSDDFQGLMEQVNKHFQKMEPQFRPQEKKMVAGMGIGK 141
Query: 311 EGCLRRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 481
L+RRQ++ ETEAW +A +EY+E+ E+MC +APNLPYVKSLFLGWF+PLR+AI
Sbjct: 142 YAILKRRQIKMETEAWEQAAQEYQEMLEDMCEQKLAPNLPYVKSLFLGWFEPLRDAI 198
>emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera]
Length = 1312
Score = 89.4 bits (220), Expect = 5e-16
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = +2
Query: 314 GCLRRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAID 484
G LRRRQV+ ETEAW + EEY+E+ EMC +APNLPYVK+LFLGWF+PLR AI+
Sbjct: 144 GLLRRRQVKAETEAWERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFEPLREAIE 200
>gb|EXB77631.1| DNA-directed RNA polymerase 2 [Morus notabilis]
Length = 935
Score = 89.0 bits (219), Expect = 6e-16
Identities = 38/54 (70%), Positives = 46/54 (85%)
Frame = +2
Query: 320 LRRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 481
LRRRQV+ ETEAW KA+ EYK++ +EMC +APNLPY+KSLFLGWF+PLR AI
Sbjct: 107 LRRRQVKLETEAWEKASNEYKQMVDEMCKKKLAPNLPYMKSLFLGWFEPLREAI 160
>ref|XP_004297187.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 997
Score = 88.6 bits (218), Expect = 8e-16
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = +2
Query: 308 KEGCLRRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 481
K G LRRRQV+ ETEAW A EY+EL +MC +APNLPY+KSLFLGWF+PLR+AI
Sbjct: 131 KYGILRRRQVKLETEAWEDAANEYQELLSDMCQQKLAPNLPYIKSLFLGWFEPLRDAI 188
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 88.6 bits (218), Expect = 8e-16
Identities = 48/110 (43%), Positives = 66/110 (60%)
Frame = +2
Query: 152 ASVSTALEPLVSSEDEVKDFFPHKAATVTESLRLEEQIKQXXXXXXXXXXXXKEGCLRRR 331
A+ + A E +S DEV++ V + +LE+Q K K LRRR
Sbjct: 96 AAEAIASEEDMSGVDEVQELVEE----VNKGDKLEKQPK-----LIGGVAQGKHNVLRRR 146
Query: 332 QVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 481
Q++ ETEAW +A +EY+EL +MC +APNLPY+KSLFLGWF+PLR+ I
Sbjct: 147 QIKMETEAWEEAAKEYRELLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVI 196
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Frame = +2
Query: 146 FRASVSTALEPLVSSEDEVKDFFPHKAATVT-ESLRLEEQIKQXXXXXXXXXXXXKEGCL 322
F S +A E + S+ +E D + E+ L+ ++ K L
Sbjct: 110 FLRSYGSAAEAIASTSEEDTDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLL 169
Query: 323 RRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 481
RRRQ++ ETEAW +A +EY+EL +MC +APNLPY+KSLFLGWF+PLR+AI
Sbjct: 170 RRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAI 222
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial [Vitis vinifera]
gi|298204431|emb|CBI16911.3| unnamed protein product
[Vitis vinifera]
Length = 1035
Score = 88.2 bits (217), Expect = 1e-15
Identities = 48/114 (42%), Positives = 65/114 (57%)
Frame = +2
Query: 140 NVFRASVSTALEPLVSSEDEVKDFFPHKAATVTESLRLEEQIKQXXXXXXXXXXXXKEGC 319
+V A ST +E VS+ DE+++ + + + K +
Sbjct: 140 SVAEAVSSTDVEEDVSASDEIQELLGEMKKEEKRQVNFKRREKLKMERGMEQGRYLR--- 196
Query: 320 LRRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 481
LRRRQV+ ETEAW A +EYKEL +MC +APNLPY+KSLFLGWF+PLR+AI
Sbjct: 197 LRRRQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAI 250
>gb|EOY31498.1| DNA/RNA polymerases superfamily protein isoform 3 [Theobroma cacao]
Length = 927
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/58 (67%), Positives = 44/58 (75%)
Frame = +2
Query: 308 KEGCLRRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 481
K LRRRQV+ ETEAW K EEY+EL EMC +APNLPYVK LFLGWF+P+R AI
Sbjct: 139 KYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREAI 196
>gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
Length = 857
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/58 (67%), Positives = 44/58 (75%)
Frame = +2
Query: 308 KEGCLRRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 481
K LRRRQV+ ETEAW K EEY+EL EMC +APNLPYVK LFLGWF+P+R AI
Sbjct: 17 KYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREAI 74
>gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
Length = 978
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/58 (67%), Positives = 44/58 (75%)
Frame = +2
Query: 308 KEGCLRRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 481
K LRRRQV+ ETEAW K EEY+EL EMC +APNLPYVK LFLGWF+P+R AI
Sbjct: 139 KYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREAI 196
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 87.4 bits (215), Expect = 2e-15
Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Frame = +2
Query: 146 FRASVSTALEPLVSSEDEVKDFFPHKAATVT-ESLRLEEQIKQXXXXXXXXXXXXKEGCL 322
F S +A E + S+ +E D + E+ L+ ++ K L
Sbjct: 110 FLRSYGSAAEAIASTSEEDIDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLL 169
Query: 323 RRRQVETETEAWRKATEEYKELTEEMCASNMAPNLPYVKSLFLGWFDPLRNAI 481
RRRQ++ ETEAW +A +EY+EL +MC +APNLPY+KSLFLGWF+PLR+AI
Sbjct: 170 RRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAI 222