BLASTX nr result

ID: Ephedra28_contig00016997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00016997
         (729 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16436.1| unknown [Picea sitchensis]                              85   2e-14
gb|AFG64052.1| hypothetical protein UMN_896_01, partial [Pinus t...    64   7e-08
gb|AEW09234.1| hypothetical protein UMN_896_01, partial [Pinus r...    62   1e-07
gb|AFG64040.1| hypothetical protein UMN_896_01, partial [Pinus t...    62   2e-07
gb|AEW09235.1| hypothetical protein UMN_896_01, partial [Pinus l...    60   7e-07

>gb|ABR16436.1| unknown [Picea sitchensis]
          Length = 590

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 62/158 (39%), Positives = 83/158 (52%), Gaps = 8/158 (5%)
 Frame = +3

Query: 204 FSQNPMRIAKL-----PVSKPSQDWKIFGQEFGKSTEPVVAKIEQNNNHHYVTTSFRPPF 368
           FS NP+R+  +     P  KPS DWKIFGQE  KS+E VV K+E+ + H++    FRPP+
Sbjct: 259 FSPNPIRVNAVNAKAAPPLKPSHDWKIFGQELSKSSESVVTKVEERDRHYHPV--FRPPY 316

Query: 369 --APMPASYDQRISFGAASHNGGMQSSVRSH-SVESHGEIYNSANDLLKQQTNRMMTXXX 539
             A    + +QRIS+  A+ NG +QS   SH S    GEIYN+  DL+KQ +        
Sbjct: 317 SHAAPYVTNEQRISYTNANQNG-LQSPNWSHISNGEGGEIYNT-RDLIKQSSR------- 367

Query: 540 XXXXXXXXXXXXXXXXXXXXXXRPCVVEGEEHSEVEAS 653
                                 RP ++E EEHS+VEAS
Sbjct: 368 ------ISPISVAGPSLSAVTARPPLMESEEHSDVEAS 399


>gb|AFG64052.1| hypothetical protein UMN_896_01, partial [Pinus taeda]
          Length = 142

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
 Frame = +3

Query: 171 QQMGNSSSYLSFSQNPMRIAKL-----PVSKPSQDWKIFGQEFGKSTEPVVAKIEQNNNH 335
           QQ    S  + FS NPMR+  +     P  KPS DWKIFGQE  KSTE VV K+E  + H
Sbjct: 74  QQAVKGSLVVPFSPNPMRVNAVNAKAAPPLKPSHDWKIFGQELSKSTEAVVTKVEDRDRH 133

Query: 336 HYVTTSFRPPF 368
           +     FRPP+
Sbjct: 134 YQPV--FRPPY 142


>gb|AEW09234.1| hypothetical protein UMN_896_01, partial [Pinus radiata]
          Length = 142

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
 Frame = +3

Query: 171 QQMGNSSSYLSFSQNPMRIAKL-----PVSKPSQDWKIFGQEFGKSTEPVVAKIEQNNNH 335
           QQ    S  + F+ NPMR+  +     P+ KPS DWKIFGQE  K+TE VV K+E  + H
Sbjct: 74  QQAVKGSLVVPFTPNPMRVNAVNAKAAPLLKPSHDWKIFGQELSKTTETVVTKVEDRDRH 133

Query: 336 HYVTTSFRPPF 368
           +     FRPP+
Sbjct: 134 YQPV--FRPPY 142


>gb|AFG64040.1| hypothetical protein UMN_896_01, partial [Pinus taeda]
           gi|383162728|gb|AFG64041.1| hypothetical protein
           UMN_896_01, partial [Pinus taeda]
           gi|383162729|gb|AFG64042.1| hypothetical protein
           UMN_896_01, partial [Pinus taeda]
           gi|383162730|gb|AFG64043.1| hypothetical protein
           UMN_896_01, partial [Pinus taeda]
           gi|383162731|gb|AFG64044.1| hypothetical protein
           UMN_896_01, partial [Pinus taeda]
           gi|383162732|gb|AFG64045.1| hypothetical protein
           UMN_896_01, partial [Pinus taeda]
           gi|383162733|gb|AFG64046.1| hypothetical protein
           UMN_896_01, partial [Pinus taeda]
           gi|383162734|gb|AFG64047.1| hypothetical protein
           UMN_896_01, partial [Pinus taeda]
           gi|383162735|gb|AFG64048.1| hypothetical protein
           UMN_896_01, partial [Pinus taeda]
           gi|383162736|gb|AFG64049.1| hypothetical protein
           UMN_896_01, partial [Pinus taeda]
           gi|383162737|gb|AFG64050.1| hypothetical protein
           UMN_896_01, partial [Pinus taeda]
           gi|383162738|gb|AFG64051.1| hypothetical protein
           UMN_896_01, partial [Pinus taeda]
           gi|383162740|gb|AFG64053.1| hypothetical protein
           UMN_896_01, partial [Pinus taeda]
           gi|383162741|gb|AFG64054.1| hypothetical protein
           UMN_896_01, partial [Pinus taeda]
           gi|383162742|gb|AFG64055.1| hypothetical protein
           UMN_896_01, partial [Pinus taeda]
           gi|383162743|gb|AFG64056.1| hypothetical protein
           UMN_896_01, partial [Pinus taeda]
          Length = 142

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
 Frame = +3

Query: 171 QQMGNSSSYLSFSQNPMRIAKL-----PVSKPSQDWKIFGQEFGKSTEPVVAKIEQNNNH 335
           QQ    S  + F  NPMR+  +     P  KPS DWKIFGQE  KSTE VV K+E  + H
Sbjct: 74  QQAVKGSLVVPFPPNPMRVNAVNAKAAPPLKPSHDWKIFGQELSKSTEAVVTKVEDRDRH 133

Query: 336 HYVTTSFRPPF 368
           +     FRPP+
Sbjct: 134 YQPV--FRPPY 142


>gb|AEW09235.1| hypothetical protein UMN_896_01, partial [Pinus lambertiana]
          Length = 142

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
 Frame = +3

Query: 171 QQMGNSSSYLSFSQNPMRIAKL-----PVSKPSQDWKIFGQEFGKSTEPVVAKIEQNNNH 335
           QQ    S  + F  NP+R+  +     P  KPS DWKIFGQE  KSTE VV K+E  + H
Sbjct: 74  QQAVKGSLVVPFPPNPIRVNAVNAKAAPPLKPSHDWKIFGQELSKSTESVVTKVEDRDRH 133

Query: 336 HYVTTSFRPPF 368
           +     FRPP+
Sbjct: 134 YQPV--FRPPY 142


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