BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00016930
         (507 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006845708.1| hypothetical protein AMTR_s00019p00240430 [A...   149   4e-34
ref|XP_003620948.1| Protein OSB3 [Medicago truncatula] gi|355495...   120   2e-25
ref|XP_006280485.1| hypothetical protein CARUB_v10026422mg [Caps...   116   3e-24
ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|33200777...   113   3e-23
ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana] gi|75328911...   112   7e-23
gb|AAM61481.1| unknown [Arabidopsis thaliana]                         112   7e-23
ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arab...   110   2e-22
ref|XP_002330744.1| predicted protein [Populus trichocarpa]           105   8e-21
ref|XP_002327104.1| predicted protein [Populus trichocarpa] gi|5...   102   7e-20
ref|XP_001703164.1| chloroplast-targeted RNA-binding protein [Ch...   100   2e-19
ref|XP_006393529.1| hypothetical protein EUTSA_v10011640mg [Eutr...    98   1e-18
gb|EXB42196.1| hypothetical protein L484_001276 [Morus notabilis]      97   3e-18
ref|XP_002529526.1| hypothetical protein RCOM_1716690 [Ricinus c...    97   3e-18
ref|XP_004513105.1| PREDICTED: protein OSB2, chloroplastic-like ...    93   4e-17
ref|XP_006398112.1| hypothetical protein EUTSA_v10000889mg [Eutr...    92   9e-17
ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arab...    91   1e-16
ref|XP_006413910.1| hypothetical protein EUTSA_v10025547mg [Eutr...    91   2e-16
ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidop...    91   2e-16
dbj|BAC42861.1| unknown protein [Arabidopsis thaliana]                 91   2e-16
ref|XP_002510278.1| conserved hypothetical protein [Ricinus comm...    91   2e-16

>ref|XP_006845708.1| hypothetical protein AMTR_s00019p00240430 [Amborella trichopoda]
           gi|548848280|gb|ERN07383.1| hypothetical protein
           AMTR_s00019p00240430 [Amborella trichopoda]
          Length = 500

 Score =  149 bits (376), Expect = 4e-34
 Identities = 77/172 (44%), Positives = 103/172 (59%), Gaps = 4/172 (2%)
 Frame = -2

Query: 506 KWFDNRKTKKCSTYPDFKHKGTHKSLWIEDFKTPTWVAPMLNNLQ-DKREN---LWNNYF 339
           KW DNRK K   T+PDFKHK T ++LW++  K   WV   L  L+ D+R++   LW + F
Sbjct: 313 KWCDNRKVKTQPTHPDFKHKETGEALWLDGPKAE-WVLSKLKTLEIDQRQDKGHLWEDLF 371

Query: 338 TDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKNDASSASQTTE 159
            DPSKW DNRK K    HPDF HK+T +ALW+D  + P WV+S L  L+ D    ++ + 
Sbjct: 372 ADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGIK-PEWVLSKLKTLEIDQRQ-NKDSN 429

Query: 158 NLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTPAWVIPML 3
           +LWK   A+  +W+D R  K   K PDF HKD  K LW++   TP W +  L
Sbjct: 430 DLWKDLVANRDKWWDNRLSKVNPKAPDFKHKDSGKGLWLNG-STPDWALTNL 480



 Score =  141 bits (356), Expect = 8e-32
 Identities = 70/181 (38%), Positives = 104/181 (57%), Gaps = 14/181 (7%)
 Frame = -2

Query: 503 WFDNRKTKKCSTYPDFKHKGTHKSLWIED---------FKTPTWVAPMLNNLQDKR---- 363
           W+DNR  K+   YPDF++K + ++LW++           ++P + A   N  + ++    
Sbjct: 240 WYDNRFDKRNPRYPDFRNKNSKEALWLDKHTPDSVLSALESPEFCAKFANGQKIEKIRAD 299

Query: 362 -ENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKND 186
             + W + F DPSKW DNRK K    HPDF HK+T +ALW+D  +   WV+S L  L+ D
Sbjct: 300 IGHRWEDLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGPK-AEWVLSKLKTLEID 358

Query: 185 ASSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTPAWVIPM 6
                Q   +LW+  FA PS+W D RK+K +  HPDF HK+  +ALW+D ++ P WV+  
Sbjct: 359 QR---QDKGHLWEDLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGIK-PEWVLSK 414

Query: 5   L 3
           L
Sbjct: 415 L 415



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 49/128 (38%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
 Frame = -2

Query: 362 ENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKNDA 183
           E LW   F  P  W+DNR  K++ ++PDF +K++ +ALW+D    P  V+S L+  +  A
Sbjct: 227 EGLWKELFAKPYNWYDNRFDKRNPRYPDFRNKNSKEALWLDK-HTPDSVLSALESPEFCA 285

Query: 182 SSAS-QTTENL-------WKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRT 27
             A+ Q  E +       W+  FA PS+W D RK+K +  HPDF HK+  +ALW+D  + 
Sbjct: 286 KFANGQKIEKIRADIGHRWEDLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGPKA 345

Query: 26  PAWVIPML 3
             WV+  L
Sbjct: 346 -EWVLSKL 352



 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 6/119 (5%)
 Frame = -2

Query: 506 KWFDNRKTKKCSTYPDFKHKGTHKSLWIEDFKTPTWVAPMLNNLQ-DKREN-----LWNN 345
           KW DNRK K   T+PDFKHK T ++LW++  K P WV   L  L+ D+R+N     LW +
Sbjct: 376 KWCDNRKVKTQPTHPDFKHKETGEALWLDGIK-PEWVLSKLKTLEIDQRQNKDSNDLWKD 434

Query: 344 YFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKNDASSASQ 168
              +  KW+DNR +K + K PDF HKD+   LW+ N   P W ++ L   K    +A +
Sbjct: 435 LVANRDKWWDNRLSKVNPKAPDFKHKDSGKGLWL-NGSTPDWALTNLTPSKAKEEAADE 492


>ref|XP_003620948.1| Protein OSB3 [Medicago truncatula] gi|355495963|gb|AES77166.1|
           Protein OSB3 [Medicago truncatula]
          Length = 491

 Score =  120 bits (301), Expect = 2e-25
 Identities = 68/192 (35%), Positives = 104/192 (54%), Gaps = 24/192 (12%)
 Frame = -2

Query: 506 KWFDNRKTKKCST----YPDFKHKGTHKSLWIE-------------DFKTPTWVAPMLNN 378
           KW+D R +K+  +    YPDFK K  + S+W++             +F TP  V P    
Sbjct: 287 KWWDFRDSKRNGSVNPKYPDFKRKDGNVSIWLDKASKSVLSRLKELEFDTPP-VKPKQTK 345

Query: 377 LQDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDK 198
              K +  WN+   +P+KW+DNR  KK  + PDF HKDT   LW+ +  +P+WV S L +
Sbjct: 346 -DSKGDESWNDLLQNPAKWWDNRVDKKYARAPDFKHKDTGVGLWLRD--SPSWVSSRLKE 402

Query: 197 LKNDASSA-------SQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWID 39
           L+ +++S        S+ ++  W     +P++W+D R  KK  K PDF HKD  +ALW+ 
Sbjct: 403 LEVESTSVKSKQAKDSKGSDESWNDLLQNPAKWWDNRLDKKNPKGPDFKHKDTGEALWLR 462

Query: 38  DLRTPAWVIPML 3
              +P+WV+P L
Sbjct: 463 G--SPSWVLPKL 472



 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 51/125 (40%), Positives = 71/125 (56%), Gaps = 14/125 (11%)
 Frame = -2

Query: 506 KWFDNRKTKKCSTYPDFKHKGTHKSLWIEDFKTPTWVAPMLNNLQDKRENL--------- 354
           KW+DNR  KK +  PDFKHK T   LW+ D  +P+WV+  L  L+ +  ++         
Sbjct: 362 KWWDNRVDKKYARAPDFKHKDTGVGLWLRD--SPSWVSSRLKELEVESTSVKSKQAKDSK 419

Query: 353 -----WNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKN 189
                WN+   +P+KW+DNR  KK+ K PDF HKDT +ALW+    +P+WV+  L  LK 
Sbjct: 420 GSDESWNDLLQNPAKWWDNRLDKKNPKGPDFKHKDTGEALWLRG--SPSWVLPKLPPLKP 477

Query: 188 DASSA 174
              SA
Sbjct: 478 KQQSA 482



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
 Frame = -2

Query: 353 WNNYFTDPSKWFDNRKTKKSN----KHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKND 186
           W +   DP KW+D R +K++     K+PDF  KD + ++W+D       V+S L +L+ D
Sbjct: 278 WGDLLDDPKKWWDFRDSKRNGSVNPKYPDFKRKDGNVSIWLDKASKS--VLSRLKELEFD 335

Query: 185 A------SSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTP 24
                   +     +  W     +P++W+D R  KK  + PDF HKD    LW+ D  +P
Sbjct: 336 TPPVKPKQTKDSKGDESWNDLLQNPAKWWDNRVDKKYARAPDFKHKDTGVGLWLRD--SP 393

Query: 23  AWV 15
           +WV
Sbjct: 394 SWV 396


>ref|XP_006280485.1| hypothetical protein CARUB_v10026422mg [Capsella rubella]
           gi|482549189|gb|EOA13383.1| hypothetical protein
           CARUB_v10026422mg [Capsella rubella]
          Length = 437

 Score =  116 bits (291), Expect = 3e-24
 Identities = 69/193 (35%), Positives = 91/193 (47%), Gaps = 25/193 (12%)
 Frame = -2

Query: 506 KWFDNRKTKKCST----YPDFKHKGTHKSLWIEDFKTPTWVAPMLNNL------------ 375
           +WFD+R  K        +PDFK K    SLW+     P W    L+ L            
Sbjct: 238 EWFDHRGNKANGLVKPKHPDFKRKAGGLSLWLST--VPDWALLKLDELEFDVFVPNGDIK 295

Query: 374 --QDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLD 201
             Q K E  W +   +P KWFDNR  K + K PDF HK+T +ALW+  T +P WV+S L 
Sbjct: 296 LKQLKGEESWKDLVQNPDKWFDNRSEKTNVKAPDFKHKETGEALWM--TDSPIWVLSKLP 353

Query: 200 KLKNDASSASQTT-------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWI 42
            LK +      +        E  WK     PS+W+D R  K+  K PDF HK+  +ALWI
Sbjct: 354 PLKKNQERPLMSNTVSLHKKEESWKNLVEDPSKWWDNRVDKRNPKGPDFKHKETGEALWI 413

Query: 41  DDLRTPAWVIPML 3
               +P W +  L
Sbjct: 414 SS--SPTWALSEL 424



 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 52/121 (42%), Positives = 70/121 (57%), Gaps = 14/121 (11%)
 Frame = -2

Query: 506 KWFDNRKTKKCSTYPDFKHKGTHKSLWIEDFKTPTWVA------------PMLNNLQD-- 369
           KWFDNR  K     PDFKHK T ++LW+ D  +P WV             P+++N     
Sbjct: 314 KWFDNRSEKTNVKAPDFKHKETGEALWMTD--SPIWVLSKLPPLKKNQERPLMSNTVSLH 371

Query: 368 KRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKN 189
           K+E  W N   DPSKW+DNR  K++ K PDF HK+T +ALWI +  +PTW +S L  L+ 
Sbjct: 372 KKEESWKNLVEDPSKWWDNRVDKRNPKGPDFKHKETGEALWISS--SPTWALSELPPLEK 429

Query: 188 D 186
           +
Sbjct: 430 N 430



 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
 Frame = -2

Query: 377 LQDKRENLWNNYFTDPSKWFDNRKTKKSN----KHPDFVHKDTHDALWIDNTRNPTWVIS 210
           + ++  N W +   +P +WFD+R  K +     KHPDF  K    +LW+     P W + 
Sbjct: 221 IDEETSNSWKHLIENPKEWFDHRGNKANGLVKPKHPDFKRKAGGLSLWLSTV--PDWALL 278

Query: 209 MLDKLK-------NDASSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKA 51
            LD+L+        D        E  WK    +P +WFD R  K   K PDF HK+  +A
Sbjct: 279 KLDELEFDVFVPNGDIKLKQLKGEESWKDLVQNPDKWFDNRSEKTNVKAPDFKHKETGEA 338

Query: 50  LWIDDLRTPAWVIPML 3
           LW+ D  +P WV+  L
Sbjct: 339 LWMTD--SPIWVLSKL 352


>ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|332007778|gb|AED95161.1|
           protein OSB3 [Arabidopsis thaliana]
          Length = 442

 Score =  113 bits (282), Expect = 3e-23
 Identities = 71/209 (33%), Positives = 98/209 (46%), Gaps = 41/209 (19%)
 Frame = -2

Query: 506 KWFDNRKTKKCST----YPDFKHKGTHKSLWIEDFKTPTW------------VAPM---- 387
           +W D+R  K        +PDFK K    SLW+     P W            + P     
Sbjct: 227 EWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLST--APDWALLKLEELKFDVLVPKGNIK 284

Query: 386 LNNLQDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISM 207
           LN L+D  E  W +   +P KW DNR  K + K+PDF HK+T +ALW+  T +P WV+S 
Sbjct: 285 LNQLKDIGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWM--TNSPIWVLSK 342

Query: 206 LDKLKND------ASSASQ---------------TTENLWKAFFAHPSRWFDKRKIKKRD 90
           L  LK +      ++  SQ                 E +WK    +PS+W+D R  K+  
Sbjct: 343 LPPLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNP 402

Query: 89  KHPDFTHKDCNKALWIDDLRTPAWVIPML 3
           K PDF HK+  +ALWI D  +P W +  L
Sbjct: 403 KGPDFKHKETGEALWIGD--SPTWALSKL 429



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 53/135 (39%), Positives = 69/135 (51%), Gaps = 28/135 (20%)
 Frame = -2

Query: 506 KWFDNRKTKKCSTYPDFKHKGTHKSLWIEDFKTPTWV----------------------- 396
           KW DNR  K    YPDFKHK T ++LW+ +  +P WV                       
Sbjct: 305 KWLDNRSDKTNVKYPDFKHKETGEALWMTN--SPIWVLSKLPPLKKNQERPFMSNKVSQL 362

Query: 395 -----APMLNNLQDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTR 231
                 P  N  Q KRE +W N   +PSKW+DNR  K++ K PDF HK+T +ALWI +  
Sbjct: 363 ELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIGD-- 420

Query: 230 NPTWVISMLDKLKND 186
           +PTW +S L  LK +
Sbjct: 421 SPTWALSKLPPLKKN 435



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
 Frame = -2

Query: 377 LQDKRENLWNNYFTDPSKWFDNRKTKKSN----KHPDFVHKDTHDALWIDNTRNPTWVIS 210
           + ++  N W +   +P +W D+R  K +      HPDF  K    +LW+     P W + 
Sbjct: 210 IDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLSTA--PDWALL 267

Query: 209 MLDKLKNDA---------SSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCN 57
            L++LK D          +      E  WK    +P +W D R  K   K+PDF HK+  
Sbjct: 268 KLEELKFDVLVPKGNIKLNQLKDIGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETG 327

Query: 56  KALWIDDLRTPAWVIPML 3
           +ALW+ +  +P WV+  L
Sbjct: 328 EALWMTN--SPIWVLSKL 343


>ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana]
           gi|75328911|sp|Q8GWJ4.1|OSB3_ARATH RecName: Full=Protein
           OSB3, chloroplastic/mitochondrial; AltName:
           Full=Organellar single-stranded DNA-binding protein 3;
           Flags: Precursor gi|26452626|dbj|BAC43396.1| unknown
           protein [Arabidopsis thaliana]
           gi|28973013|gb|AAO63831.1| unknown protein [Arabidopsis
           thaliana] gi|30102734|gb|AAP21285.1| At5g44785
           [Arabidopsis thaliana] gi|110743279|dbj|BAE99530.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332007779|gb|AED95162.1| protein OSB3 [Arabidopsis
           thaliana]
          Length = 440

 Score =  112 bits (279), Expect = 7e-23
 Identities = 70/207 (33%), Positives = 95/207 (45%), Gaps = 39/207 (18%)
 Frame = -2

Query: 506 KWFDNRKTKKCST----YPDFKHKGTHKSLWIEDFKTPTWVAPMLNNL------------ 375
           +W D+R  K        +PDFK K    SLW+     P W    L  L            
Sbjct: 227 EWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLST--APDWALLKLEELKFDVLVPKGNIK 284

Query: 374 --QDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLD 201
             Q K E  W +   +P KW DNR  K + K+PDF HK+T +ALW+  T +P WV+S L 
Sbjct: 285 LNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWM--TNSPIWVLSKLP 342

Query: 200 KLKND------ASSASQ---------------TTENLWKAFFAHPSRWFDKRKIKKRDKH 84
            LK +      ++  SQ                 E +WK    +PS+W+D R  K+  K 
Sbjct: 343 PLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKG 402

Query: 83  PDFTHKDCNKALWIDDLRTPAWVIPML 3
           PDF HK+  +ALWI D  +P W +  L
Sbjct: 403 PDFKHKETGEALWIGD--SPTWALSKL 427



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 53/135 (39%), Positives = 69/135 (51%), Gaps = 28/135 (20%)
 Frame = -2

Query: 506 KWFDNRKTKKCSTYPDFKHKGTHKSLWIEDFKTPTWV----------------------- 396
           KW DNR  K    YPDFKHK T ++LW+ +  +P WV                       
Sbjct: 303 KWLDNRSDKTNVKYPDFKHKETGEALWMTN--SPIWVLSKLPPLKKNQERPFMSNKVSQL 360

Query: 395 -----APMLNNLQDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTR 231
                 P  N  Q KRE +W N   +PSKW+DNR  K++ K PDF HK+T +ALWI +  
Sbjct: 361 ELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIGD-- 418

Query: 230 NPTWVISMLDKLKND 186
           +PTW +S L  LK +
Sbjct: 419 SPTWALSKLPPLKKN 433



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
 Frame = -2

Query: 377 LQDKRENLWNNYFTDPSKWFDNRKTKKSN----KHPDFVHKDTHDALWIDNTRNPTWVIS 210
           + ++  N W +   +P +W D+R  K +      HPDF  K    +LW+     P W + 
Sbjct: 210 IDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLSTA--PDWALL 267

Query: 209 MLDKLKNDASSASQTT-------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKA 51
            L++LK D               E  WK    +P +W D R  K   K+PDF HK+  +A
Sbjct: 268 KLEELKFDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEA 327

Query: 50  LWIDDLRTPAWVIPML 3
           LW+ +  +P WV+  L
Sbjct: 328 LWMTN--SPIWVLSKL 341


>gb|AAM61481.1| unknown [Arabidopsis thaliana]
          Length = 440

 Score =  112 bits (279), Expect = 7e-23
 Identities = 70/207 (33%), Positives = 95/207 (45%), Gaps = 39/207 (18%)
 Frame = -2

Query: 506 KWFDNRKTKKCST----YPDFKHKGTHKSLWIEDFKTPTWVAPMLNNL------------ 375
           +W D+R  K        +PDFK K    SLW+     P W    L  L            
Sbjct: 227 EWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLST--APDWALLKLEELKFDVLVPKGNIK 284

Query: 374 --QDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLD 201
             Q K E  W +   +P KW DNR  K + K+PDF HK+T +ALW+  T +P WV+S L 
Sbjct: 285 LNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWM--TNSPIWVLSKLP 342

Query: 200 KLKND------ASSASQ---------------TTENLWKAFFAHPSRWFDKRKIKKRDKH 84
            LK +      ++  SQ                 E +WK    +PS+W+D R  K+  K 
Sbjct: 343 PLKKNQERPLMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKG 402

Query: 83  PDFTHKDCNKALWIDDLRTPAWVIPML 3
           PDF HK+  +ALWI D  +P W +  L
Sbjct: 403 PDFKHKETGEALWIGD--SPTWALSKL 427



 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 28/135 (20%)
 Frame = -2

Query: 506 KWFDNRKTKKCSTYPDFKHKGTHKSLWIEDFKTPTWVA------------PMLNNL---- 375
           KW DNR  K    YPDFKHK T ++LW+ +  +P WV             P+++N     
Sbjct: 303 KWLDNRSDKTNVKYPDFKHKETGEALWMTN--SPIWVLSKLPPLKKNQERPLMSNKVSQL 360

Query: 374 ------------QDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTR 231
                       Q KRE +W N   +PSKW+DNR  K++ K PDF HK+T +ALWI +  
Sbjct: 361 ELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIGD-- 418

Query: 230 NPTWVISMLDKLKND 186
           +PTW +S L  LK +
Sbjct: 419 SPTWALSKLPPLKKN 433



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
 Frame = -2

Query: 377 LQDKRENLWNNYFTDPSKWFDNRKTKKSN----KHPDFVHKDTHDALWIDNTRNPTWVIS 210
           + ++  N W +   +P +W D+R  K +      HPDF  K    +LW+     P W + 
Sbjct: 210 IDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLSTA--PDWALL 267

Query: 209 MLDKLKNDASSASQTT-------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKA 51
            L++LK D               E  WK    +P +W D R  K   K+PDF HK+  +A
Sbjct: 268 KLEELKFDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEA 327

Query: 50  LWIDDLRTPAWVIPML 3
           LW+ +  +P WV+  L
Sbjct: 328 LWMTN--SPIWVLSKL 341


>ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arabidopsis lyrata subsp.
           lyrata] gi|297309381|gb|EFH39805.1| hypothetical protein
           ARALYDRAFT_494502 [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score =  110 bits (275), Expect = 2e-22
 Identities = 67/207 (32%), Positives = 92/207 (44%), Gaps = 39/207 (18%)
 Frame = -2

Query: 506 KWFDNRKTKKCST----YPDFKHKGTHKSLWIEDFKTPTWVAPMLNNL------------ 375
           +W D+R  K        +PDFK K    SLW+     P W  P L  L            
Sbjct: 227 EWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLST--APDWALPKLKELEFDVLVPKGNIK 284

Query: 374 --QDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLD 201
             Q K E  W +   +P KW DNR  K + K+PDF HK+T +ALW+  T +P WV+S L 
Sbjct: 285 LNQLKGEESWKDLVQNPDKWLDNRLDKTNVKYPDFKHKETGEALWM--TNSPIWVLSKLP 342

Query: 200 KLKNDASSASQTT---------------------ENLWKAFFAHPSRWFDKRKIKKRDKH 84
            LK +      +                      E  WK    +PS+W+D R  K+  K 
Sbjct: 343 PLKKNQERPLMSNTVPQLELDVVVPNGNLTQLKREESWKNLVENPSKWWDNRLDKRNPKA 402

Query: 83  PDFTHKDCNKALWIDDLRTPAWVIPML 3
           PDF HK+  + LWI++  +P W +  L
Sbjct: 403 PDFKHKETGEVLWINN-NSPTWALSKL 428



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 53/135 (39%), Positives = 71/135 (52%), Gaps = 28/135 (20%)
 Frame = -2

Query: 506 KWFDNRKTKKCSTYPDFKHKGTHKSLWIEDFKTPTWVA------------PMLNNL---- 375
           KW DNR  K    YPDFKHK T ++LW+ +  +P WV             P+++N     
Sbjct: 303 KWLDNRLDKTNVKYPDFKHKETGEALWMTN--SPIWVLSKLPPLKKNQERPLMSNTVPQL 360

Query: 374 ------------QDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTR 231
                       Q KRE  W N   +PSKW+DNR  K++ K PDF HK+T + LWI+N  
Sbjct: 361 ELDVVVPNGNLTQLKREESWKNLVENPSKWWDNRLDKRNPKAPDFKHKETGEVLWINN-N 419

Query: 230 NPTWVISMLDKLKND 186
           +PTW +S L  LK +
Sbjct: 420 SPTWALSKLPPLKKN 434



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
 Frame = -2

Query: 377 LQDKRENLWNNYFTDPSKWFDNRKTKKSN----KHPDFVHKDTHDALWIDNTRNPTWVIS 210
           + ++  N W +   +P +W D+R  K +      HPDF  K    +LW+     P W + 
Sbjct: 210 IDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLSTA--PDWALP 267

Query: 209 MLDKL-------KNDASSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKA 51
            L +L       K +        E  WK    +P +W D R  K   K+PDF HK+  +A
Sbjct: 268 KLKELEFDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRLDKTNVKYPDFKHKETGEA 327

Query: 50  LWIDDLRTPAWVIPML 3
           LW+ +  +P WV+  L
Sbjct: 328 LWMTN--SPIWVLSKL 341


>ref|XP_002330744.1| predicted protein [Populus trichocarpa]
          Length = 354

 Score =  105 bits (261), Expect = 8e-21
 Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 10/129 (7%)
 Frame = -2

Query: 359 NLWNNYFTDPSKWFDNRKTKKSN----KHPDFVHKDTHDALWIDNTRNPTWVISMLDKLK 192
           N W +   +P++W+D R +K+S     KHPDF HK+ + ++W+  T  P+W+ S L+K+K
Sbjct: 206 NSWTDLLENPNQWWDYRSSKRSGLVKPKHPDFKHKNNNQSVWL--TGAPSWIFSGLEKVK 263

Query: 191 NDASSA------SQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLR 30
            D  +A       Q  E  WK    +P +W+D R  KK  K PDF HK+  + LW+D   
Sbjct: 264 FDVKTALPTQTKQQKEEECWKDLVENPHKWWDNRVDKKNPKSPDFKHKETGEGLWLD--T 321

Query: 29  TPAWVIPML 3
           +PAWV+P L
Sbjct: 322 SPAWVLPKL 330



 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 17/122 (13%)
 Frame = -2

Query: 506 KWFDNRKTKKCST----YPDFKHKGTHKSLWIEDFKTPTWVAPMLNNL------------ 375
           +W+D R +K+       +PDFKHK  ++S+W+     P+W+   L  +            
Sbjct: 217 QWWDYRSSKRSGLVKPKHPDFKHKNNNQSVWLTG--APSWIFSGLEKVKFDVKTALPTQT 274

Query: 374 -QDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDK 198
            Q K E  W +   +P KW+DNR  KK+ K PDF HK+T + LW+D   +P WV+  L  
Sbjct: 275 KQQKEEECWKDLVENPHKWWDNRVDKKNPKSPDFKHKETGEGLWLDT--SPAWVLPKLPP 332

Query: 197 LK 192
            K
Sbjct: 333 TK 334


>ref|XP_002327104.1| predicted protein [Populus trichocarpa]
           gi|566202259|ref|XP_006375003.1| hypothetical protein
           POPTR_0014s03490g [Populus trichocarpa]
           gi|550323317|gb|ERP52800.1| hypothetical protein
           POPTR_0014s03490g [Populus trichocarpa]
          Length = 371

 Score =  102 bits (253), Expect = 7e-20
 Identities = 50/119 (42%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
 Frame = -2

Query: 356 LWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKNDASS 177
           LW  +F+ P +W+DNRK KK++K PDF HK + DALW+    +P W+ + L  L   A  
Sbjct: 224 LWKAFFSSPHEWWDNRKFKKNSKLPDFKHKISGDALWL-RPDDPLWIKTKLQLLDWKAGE 282

Query: 176 ASQTTEN-----LWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTPAWV 15
             +   +     LW+ FFA P  W+D RK KK    PDF HKD  +ALW+     P WV
Sbjct: 283 HCEEERHKNHLYLWQVFFASPHEWWDNRKNKKNSASPDFKHKDTGEALWLSP-NDPPWV 340



 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 48/117 (41%), Positives = 68/117 (58%), Gaps = 15/117 (12%)
 Frame = -2

Query: 506 KWFDNRKTKKCSTYPDFKHKGTHKSLWIEDFKTPTWVAPMLNNL---------QDKREN- 357
           +W+DNRK KK S  PDFKHK +  +LW+     P W+   L  L         +++ +N 
Sbjct: 234 EWWDNRKFKKNSKLPDFKHKISGDALWLRP-DDPLWIKTKLQLLDWKAGEHCEEERHKNH 292

Query: 356 --LWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWV---ISMLD 201
             LW  +F  P +W+DNRK KK++  PDF HKDT +ALW+ +  +P WV   I +LD
Sbjct: 293 LYLWQVFFASPHEWWDNRKNKKNSASPDFKHKDTGEALWL-SPNDPPWVKRQIQLLD 348


>ref|XP_001703164.1| chloroplast-targeted RNA-binding protein [Chlamydomonas
           reinhardtii] gi|37545634|gb|AAM76787.1| RNA-binding
           protein RB38 [Chlamydomonas reinhardtii]
           gi|37723144|gb|AAP30010.1| 38 kDa RNA-binding protein
           [Chlamydomonas reinhardtii] gi|158270704|gb|EDO96540.1|
           chloroplast-targeted RNA-binding protein [Chlamydomonas
           reinhardtii]
          Length = 382

 Score =  100 bits (250), Expect = 2e-19
 Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 60/228 (26%)
 Frame = -2

Query: 506 KWFDNRKTKKCSTYPDFKHKGTHK-SLWIEDFKTPTWVAPMLNNLQDKRENL-------- 354
           +W+DNR  K     PDF  K     +LWI+    PTWV  +L++L  ++ N         
Sbjct: 56  EWYDNRTRKTNPKAPDFVRKDDRAVALWIDGRDVPTWVEELLHDLDSRQVNRRQQRDSES 115

Query: 353 -------------------------WNNYFTDPSKWFDNRKTKKSNKHPDFVHK-DTHDA 252
                                    W    ++P +W+DNR  K S++ PDFV + D + A
Sbjct: 116 GDERGGRGERRSGPGGGRQAAEAANWEALRSNPDEWYDNRNRKTSDRQPDFVRRDDRNSA 175

Query: 251 LWIDNTRNPTWVISMLDKL----------------------KNDASSASQTTENL--WKA 144
           LW+D+   P WV  +L +L                      + +     +  E L  W++
Sbjct: 176 LWLDSRGVPEWVDELLAELDERQAARREQRVAERAAGGGDERQEGGGGRRGAEELANWES 235

Query: 143 FFAHPSRWFDKRKIKKRDKHPDFTHKDCNK-ALWIDDLRTPAWVIPML 3
             A+P  W+D R  K  D+ PDF  +D  + ALW+D    P WV  +L
Sbjct: 236 LRANPIEWYDNRSRKTSDRQPDFVRRDDRRAALWLDSRGAPPWVGDLL 283



 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 65/222 (29%), Positives = 95/222 (42%), Gaps = 54/222 (24%)
 Frame = -2

Query: 506 KWFDNRKTKKCSTYPDFKHKGTHKS-LWIEDFKTPTWVAPMLNNLQDKR----------- 363
           +W+DNR  K     PDF  +    S LW++    P WV  +L  L +++           
Sbjct: 150 EWYDNRNRKTSDRQPDFVRRDDRNSALWLDSRGVPEWVDELLAELDERQAARREQRVAER 209

Query: 362 ------------------ENL--WNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDA-LW 246
                             E L  W +   +P +W+DNR  K S++ PDFV +D   A LW
Sbjct: 210 AAGGGDERQEGGGGRRGAEELANWESLRANPIEWYDNRSRKTSDRQPDFVRRDDRRAALW 269

Query: 245 IDNTRNPTWVISMLDKLKNDAS----------SASQTTENL----------WKAFFAHPS 126
           +D+   P WV  +L +L   A           SA+ +T  L          W++  A+P 
Sbjct: 270 LDSRGAPPWVGDLLAELDAAAQARRQQRQAERSAAPSTPELEAKRAAEAANWESLRANPE 329

Query: 125 RWFDKRKIKKRDKHPDFTHK-DCNKALWIDDLRTPAWVIPML 3
            WFD R  K+  K PDF  K D  +ALW+     P W+  +L
Sbjct: 330 AWFDNRNNKQTPKSPDFRKKDDRTQALWVTSYGAPEWLNELL 371



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 29/133 (21%)
 Frame = -2

Query: 506 KWFDNRKTKKCSTYPDFKHKGTHKS-LWIEDFKTPTWVAPMLNNL----QDKRENL---- 354
           +W+DNR  K     PDF  +   ++ LW++    P WV  +L  L    Q +R+      
Sbjct: 242 EWYDNRSRKTSDRQPDFVRRDDRRAALWLDSRGAPPWVGDLLAELDAAAQARRQQRQAER 301

Query: 353 -------------------WNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTH-DALWIDNT 234
                              W +   +P  WFDNR  K++ K PDF  KD    ALW+ + 
Sbjct: 302 SAAPSTPELEAKRAAEAANWESLRANPEAWFDNRNNKQTPKSPDFRKKDDRTQALWVTSY 361

Query: 233 RNPTWVISMLDKL 195
             P W+  +L +L
Sbjct: 362 GAPEWLNELLSEL 374


>ref|XP_006393529.1| hypothetical protein EUTSA_v10011640mg [Eutrema salsugineum]
           gi|557090107|gb|ESQ30815.1| hypothetical protein
           EUTSA_v10011640mg [Eutrema salsugineum]
          Length = 329

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
 Frame = -2

Query: 359 NLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWV---ISMLDKLKN 189
           +LWN +F +P +W+D R+ KK+ K PDF HKDT++A W+  +  P WV   + + D+ + 
Sbjct: 196 HLWNAFFANPDEWWDKRRNKKNPKQPDFKHKDTNEAFWL-GSDTPVWVTRQLELFDQKRP 254

Query: 188 DASSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTPAWV 15
           D              FFA+P  W+D R+ K   + PDF HKD  +ALW+    TP WV
Sbjct: 255 D-------------VFFANPQEWWDNRRDKLNPRWPDFKHKDTGEALWLHS-DTPVWV 298



 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 42/104 (40%), Positives = 63/104 (60%)
 Frame = -2

Query: 506 KWFDNRKTKKCSTYPDFKHKGTHKSLWIEDFKTPTWVAPMLNNLQDKRENLWNNYFTDPS 327
           +W+D R+ KK    PDFKHK T+++ W+    TP WV   L     KR ++   +F +P 
Sbjct: 207 EWWDKRRNKKNPKQPDFKHKDTNEAFWLGS-DTPVWVTRQLELFDQKRPDV---FFANPQ 262

Query: 326 KWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDKL 195
           +W+DNR+ K + + PDF HKDT +ALW+ ++  P WV   L+ L
Sbjct: 263 EWWDNRRDKLNPRWPDFKHKDTGEALWL-HSDTPVWVSRQLELL 305



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 KLKNDASSASQTTE-NLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTP 24
           K + D    S+  E +LW AFFA+P  W+DKR+ KK  K PDF HKD N+A W+    TP
Sbjct: 181 KSETDGIEESKNDEIHLWNAFFANPDEWWDKRRNKKNPKQPDFKHKDTNEAFWLGS-DTP 239

Query: 23  AWVIPML 3
            WV   L
Sbjct: 240 VWVTRQL 246


>gb|EXB42196.1| hypothetical protein L484_001276 [Morus notabilis]
          Length = 380

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 31/199 (15%)
 Frame = -2

Query: 506 KWFDNRKTKKCST-----YPDFKHKGTHKSLWIE-----------------DFKTPTWVA 393
           +W+DNR  KKC+      YPDF HK   + +W+                    K  T V 
Sbjct: 168 QWWDNRD-KKCNRSVSQKYPDFIHKDDRRGVWLNRAPRSVLIELEGLQFDVQIKNSTEVE 226

Query: 392 PMLNNLQDKRENLWNNYFTDPSKWFDNRKTKKSN----KHPDFVHKDTHDALWIDNTRNP 225
                 +D     W +   +  +W D R +K +     ++PDF HKD   ALW+ +   P
Sbjct: 227 QFKGAKKDGDSASWRDLIDNSEQWKDYRNSKLNGLVNPRYPDFKHKDGSLALWLSSA--P 284

Query: 224 TWVISMLDKLKNDAS-----SASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDC 60
            WV   L+ LK D       +     + LWK    HP +W+D R  K ++  PDF HK+ 
Sbjct: 285 QWVSLQLEGLKFDGGFKKPKAVKANKDELWKDLVEHPEKWWDNRLGKLKENSPDFKHKET 344

Query: 59  NKALWIDDLRTPAWVIPML 3
            + LW+    +P WV+  L
Sbjct: 345 GEGLWLRS--SPTWVLSKL 361



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
 Frame = -2

Query: 506 KWFDNRKTKKCST----YPDFKHKGTHKSLWIEDFKTPTWVAPMLNNLQ----------- 372
           +W D R +K        YPDFKHK    +LW+     P WV+  L  L+           
Sbjct: 249 QWKDYRNSKLNGLVNPRYPDFKHKDGSLALWLSS--APQWVSLQLEGLKFDGGFKKPKAV 306

Query: 371 -DKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISML--D 201
              ++ LW +    P KW+DNR  K     PDF HK+T + LW+ +  +PTWV+S L   
Sbjct: 307 KANKDELWKDLVEHPEKWWDNRLGKLKENSPDFKHKETGEGLWLRS--SPTWVLSKLPPP 364

Query: 200 KLKNDASSASQTT 162
           K K D+S   + T
Sbjct: 365 KSKQDSSFGKRDT 377



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 20/182 (10%)
 Frame = -2

Query: 500 FDNRKTKKCSTYPDFKHKGTHKSLWIEDFKTPTWVAPMLNNLQDKRENLWNNYFTDPSKW 321
           F  R    C  + D   +    S+  +  K    V+  +N  +    + W +   +P +W
Sbjct: 111 FRTRVLAHCLNFIDESVQTAKSSVLYKQEKATRNVSDRVNKDESDLSS-WTDLLENPKQW 169

Query: 320 FDNRKTK----KSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKNDASSASQT---- 165
           +DNR  K     S K+PDF+HKD    +W++  R P  V+  L+ L+ D    + T    
Sbjct: 170 WDNRDKKCNRSVSQKYPDFIHKDDRRGVWLN--RAPRSVLIELEGLQFDVQIKNSTEVEQ 227

Query: 164 --------TENLWKAFFAHPSRWFDKRKIK----KRDKHPDFTHKDCNKALWIDDLRTPA 21
                       W+    +  +W D R  K       ++PDF HKD + ALW+     P 
Sbjct: 228 FKGAKKDGDSASWRDLIDNSEQWKDYRNSKLNGLVNPRYPDFKHKDGSLALWLSS--APQ 285

Query: 20  WV 15
           WV
Sbjct: 286 WV 287


>ref|XP_002529526.1| hypothetical protein RCOM_1716690 [Ricinus communis]
           gi|223531010|gb|EEF32864.1| hypothetical protein
           RCOM_1716690 [Ricinus communis]
          Length = 281

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 28/196 (14%)
 Frame = -2

Query: 506 KWFDNRKTKKCSTYPDFKHKGTHKSLWIEDFKTPTWVAPMLNNLQ-DKRE---------- 360
           +W+D R          F+ K   + L+I D  TP W+   L  +  DK+           
Sbjct: 78  EWWDIRSQVDNPKGASFERKKNGELLYI-DHATPKWIQEKLEGMAFDKKTTVEGGKGSMI 136

Query: 359 -------NLWNNYFTDPSKWFDNRKTKKSN----KHPDFVHKDTHDALWIDNTRNPTWVI 213
                  N W    +DP +W+D R +K +     KHPDF  KD   ALW++    P W++
Sbjct: 137 KNGDSVLNSWRELASDPKQWWDYRSSKLNGLVNPKHPDFKRKDGDVALWLNKA--PRWIL 194

Query: 212 SMLDKLKNDAS--SASQTTENL----WKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKA 51
           S L+KL+ D     + Q  ++     W     HP++W+D R  KK +++PDF HK+    
Sbjct: 195 SELEKLEFDVQIPKSKQVKQHKGDANWTDLVGHPNKWWDNRLNKKNERYPDFKHKETGVG 254

Query: 50  LWIDDLRTPAWVIPML 3
           LW+ +  +P WV+  L
Sbjct: 255 LWLSN--SPTWVLSEL 268



 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 17/129 (13%)
 Frame = -2

Query: 506 KWFDNRKTKKCST----YPDFKHKGTHKSLWIEDFKTPTWVAPMLNNL------------ 375
           +W+D R +K        +PDFK K    +LW+   K P W+   L  L            
Sbjct: 155 QWWDYRSSKLNGLVNPKHPDFKRKDGDVALWLN--KAPRWILSELEKLEFDVQIPKSKQV 212

Query: 374 -QDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDK 198
            Q K +  W +    P+KW+DNR  KK+ ++PDF HK+T   LW+ N  +PTWV+S L  
Sbjct: 213 KQHKGDANWTDLVGHPNKWWDNRLNKKNERYPDFKHKETGVGLWLSN--SPTWVLSELPP 270

Query: 197 LKNDASSAS 171
           +K D ++A+
Sbjct: 271 MKGDKNAAT 279



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
 Frame = -2

Query: 362 ENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKNDA 183
           E  W +  T P +W+D R    + K   F  K   + L+ID+   P W+   L+ +  D 
Sbjct: 66  EQSWKDLLTSPHEWWDIRSQVDNPKGASFERKKNGELLYIDHA-TPKWIQEKLEGMAFDK 124

Query: 182 SSA-----------SQTTENLWKAFFAHPSRWFDKRKIK----KRDKHPDFTHKDCNKAL 48
            +              +  N W+   + P +W+D R  K       KHPDF  KD + AL
Sbjct: 125 KTTVEGGKGSMIKNGDSVLNSWRELASDPKQWWDYRSSKLNGLVNPKHPDFKRKDGDVAL 184

Query: 47  WIDDLRTPAWVIPML 3
           W++  + P W++  L
Sbjct: 185 WLN--KAPRWILSEL 197


>ref|XP_004513105.1| PREDICTED: protein OSB2, chloroplastic-like [Cicer arietinum]
          Length = 377

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 10/133 (7%)
 Frame = -2

Query: 371 DKRENLWNNYFTDPSKWFDNRKTKK----SNKHPDFVHKDTHDALWIDNTRNPTWVISML 204
           D   + W+N   DP +W+D R +K+    S ++PDF  KD    +WID  R P WV+S L
Sbjct: 236 DSLSSSWSNLLGDPKQWWDYRDSKRKELVSPRYPDFKRKDGSAPIWID--RAPKWVLSRL 293

Query: 203 DKLKNDA------SSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWI 42
            +L+ D        +     +  W     +P++W+D R  KK ++ PDF HK+  + LW+
Sbjct: 294 QELEFDIPVVKPKQAKDGNGDQSWNDLVQNPAKWWDNRLNKKNERGPDFKHKETGEGLWL 353

Query: 41  DDLRTPAWVIPML 3
            D  +P+WV+P L
Sbjct: 354 KD--SPSWVLPKL 364



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 17/122 (13%)
 Frame = -2

Query: 506 KWFDNRKTKK----CSTYPDFKHKGTHKSLWIEDFKTPTWVAPMLNNLQ----------- 372
           +W+D R +K+       YPDFK K     +WI+  + P WV   L  L+           
Sbjct: 251 QWWDYRDSKRKELVSPRYPDFKRKDGSAPIWID--RAPKWVLSRLQELEFDIPVVKPKQA 308

Query: 371 --DKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDK 198
                +  WN+   +P+KW+DNR  KK+ + PDF HK+T + LW+ +  +P+WV+  L  
Sbjct: 309 KDGNGDQSWNDLVQNPAKWWDNRLNKKNERGPDFKHKETGEGLWLKD--SPSWVLPKLPP 366

Query: 197 LK 192
           L+
Sbjct: 367 LQ 368


>ref|XP_006398112.1| hypothetical protein EUTSA_v10000889mg [Eutrema salsugineum]
           gi|557099201|gb|ESQ39565.1| hypothetical protein
           EUTSA_v10000889mg [Eutrema salsugineum]
          Length = 437

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 61/182 (33%), Positives = 82/182 (45%), Gaps = 17/182 (9%)
 Frame = -2

Query: 506 KWFDNRKTKKCST----YPDFKHKGTHKSLWIEDFKTPTWVAPMLNNL------------ 375
           +W D+R  K        +PDFK K    SLW++    P WV   LN L            
Sbjct: 216 EWVDHRGNKASGLVKPRHPDFKGKEGDLSLWLDS--APDWVLQKLNRLKFDVFVPKGKLK 273

Query: 374 QDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDKL 195
           Q K E  W +   +P KW D+R TK + K PDF H++T +ALW+  T +PTWV+S L  L
Sbjct: 274 QLKGEESWKDLVENPDKWLDSRSTKTNVKAPDFKHRETGEALWM--TDSPTWVLSKLPPL 331

Query: 194 KNDASSAS-QTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTPAW 18
           K          T N+                     K PDF HK+  +ALW+    +P W
Sbjct: 332 KKTQERPQIVNTTNV---------------------KAPDFKHKESGEALWM--TASPTW 368

Query: 17  VI 12
           V+
Sbjct: 369 VL 370



 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
 Frame = -2

Query: 377 LQDKRENLWNNYFTDPSKWFDNRKTKKSN----KHPDFVHKDTHDALWIDNTRNPTWVIS 210
           + ++  N W +   +P +W D+R  K S     +HPDF  K+   +LW+D+   P WV+ 
Sbjct: 199 MDEETSNAWKHLLENPKEWVDHRGNKASGLVKPRHPDFKGKEGDLSLWLDSA--PDWVLQ 256

Query: 209 MLDKLKNDASSASQTTENL-----WKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALW 45
            L++LK D        + L     WK    +P +W D R  K   K PDF H++  +ALW
Sbjct: 257 KLNRLKFDVFVPKGKLKQLKGEESWKDLVENPDKWLDSRSTKTNVKAPDFKHRETGEALW 316

Query: 44  IDDLRTPAWVIPML 3
           + D  +P WV+  L
Sbjct: 317 MTD--SPTWVLSKL 328



 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 39/105 (37%), Positives = 54/105 (51%)
 Frame = -2

Query: 506 KWFDNRKTKKCSTYPDFKHKGTHKSLWIEDFKTPTWVAPMLNNLQDKRENLWNNYFTDPS 327
           KW D+R TK     PDFKH+ T ++LW+ D  +PTWV   L  L+  +E           
Sbjct: 290 KWLDSRSTKTNVKAPDFKHRETGEALWMTD--SPTWVLSKLPPLKKTQER---------- 337

Query: 326 KWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDKLK 192
                     + K PDF HK++ +ALW+  T +PTWV+  L  LK
Sbjct: 338 ---PQIVNTTNVKAPDFKHKESGEALWM--TASPTWVLLKLPPLK 377


>ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arabidopsis lyrata subsp.
           lyrata] gi|297315788|gb|EFH46211.1| hypothetical protein
           ARALYDRAFT_492872 [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 10/133 (7%)
 Frame = -2

Query: 371 DKRENLWNNYFTDPSKWFDNRKTKKSN----KHPDFVHKDTHDALWIDNTRNPTWVISML 204
           D+  + WN+   +P +W+D+R+ K +     +HPDF  KD+  +LW++    P WV+  L
Sbjct: 226 DEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSLSLWLNKA--PNWVLPKL 283

Query: 203 DKLKNDASSASQTT------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWI 42
           + LK D              E  WK    +P +W+D R  K+  K PDF HK+  +ALW+
Sbjct: 284 EGLKFDVLVPKGRVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWL 343

Query: 41  DDLRTPAWVIPML 3
           ++  +P WV+P L
Sbjct: 344 NE--SPTWVLPKL 354



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 17/127 (13%)
 Frame = -2

Query: 506 KWFDNRKTKKCST----YPDFKHKGTHKSLWIEDFKTPTWVAPMLNNL------------ 375
           +W+D+R+ K        +PDFK K +  SLW+   K P WV P L  L            
Sbjct: 241 EWWDHRENKVNGLVKPRHPDFKSKDSSLSLWLN--KAPNWVLPKLEGLKFDVLVPKGRVV 298

Query: 374 -QDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDK 198
            Q K E  W +   +P KW+DNR  K++ K PDF HK+T +ALW++   +PTWV+  L  
Sbjct: 299 KQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--ESPTWVLPKLPP 356

Query: 197 LKNDASS 177
           +K    S
Sbjct: 357 VKKKQES 363


>ref|XP_006413910.1| hypothetical protein EUTSA_v10025547mg [Eutrema salsugineum]
           gi|557115080|gb|ESQ55363.1| hypothetical protein
           EUTSA_v10025547mg [Eutrema salsugineum]
          Length = 360

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 10/127 (7%)
 Frame = -2

Query: 353 WNNYFTDPSKWFDNRKTKKSN----KHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKND 186
           WN+   +P +W+D+R+ K +     +HPDF +KDT  +LW++    P WV+  L+ L+ D
Sbjct: 225 WNHLIENPKEWWDHRENKANGLVKPRHPDFKNKDTSVSLWLNKA--PDWVLPKLEGLEFD 282

Query: 185 ASSASQTT------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTP 24
                         E  WK    +P +W+D R  K+  K PDF HK+  +ALW+++  +P
Sbjct: 283 VLVPKSRGVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNE--SP 340

Query: 23  AWVIPML 3
            WV+P L
Sbjct: 341 TWVLPKL 347



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 17/118 (14%)
 Frame = -2

Query: 506 KWFDNRKTKKCST----YPDFKHKGTHKSLWIEDFKTPTWVAPMLNNL------------ 375
           +W+D+R+ K        +PDFK+K T  SLW+   K P WV P L  L            
Sbjct: 234 EWWDHRENKANGLVKPRHPDFKNKDTSVSLWLN--KAPDWVLPKLEGLEFDVLVPKSRGV 291

Query: 374 -QDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISML 204
            Q K E  W +   +P KW+DNR  K++ K PDF HK+T +ALW++   +PTWV+  L
Sbjct: 292 KQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--ESPTWVLPKL 347


>ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidopsis thaliana]
           gi|332658861|gb|AEE84261.1| plastid transcriptionally
           active 9 [Arabidopsis thaliana]
          Length = 371

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 10/133 (7%)
 Frame = -2

Query: 371 DKRENLWNNYFTDPSKWFDNRKTKKSN----KHPDFVHKDTHDALWIDNTRNPTWVISML 204
           D+  + WN+   +P +W+D+R+ K +     +HPDF  KD+  +LW++    P WV+  L
Sbjct: 231 DEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKA--PNWVLPKL 288

Query: 203 DKLKNDASSASQTT------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWI 42
           + L+ D              E  WK    +P +W+D R  K+  K PDF HK+  +ALW+
Sbjct: 289 EGLEFDVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWL 348

Query: 41  DDLRTPAWVIPML 3
           ++  +P WV+P L
Sbjct: 349 NE--SPTWVLPKL 359



 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 17/127 (13%)
 Frame = -2

Query: 506 KWFDNRKTKKCST----YPDFKHKGTHKSLWIEDFKTPTWVAPMLNNL------------ 375
           +W+D+R+ K        +PDFK K +  SLW+   K P WV P L  L            
Sbjct: 246 EWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLN--KAPNWVLPKLEGLEFDVLVPKARVV 303

Query: 374 -QDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDK 198
            Q K E  W +   +P KW+DNR  K++ K PDF HK+T +ALW++   +PTWV+  L  
Sbjct: 304 KQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--ESPTWVLPKLPP 361

Query: 197 LKNDASS 177
           +K    S
Sbjct: 362 VKKKQES 368


>dbj|BAC42861.1| unknown protein [Arabidopsis thaliana]
          Length = 371

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 10/133 (7%)
 Frame = -2

Query: 371 DKRENLWNNYFTDPSKWFDNRKTKKSN----KHPDFVHKDTHDALWIDNTRNPTWVISML 204
           D+  + WN+   +P +W+D+R+ K +     +HPDF  KD+  +LW++    P WV+  L
Sbjct: 231 DEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKA--PNWVLPKL 288

Query: 203 DKLKNDASSASQTT------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWI 42
           + L+ D              E  WK    +P +W+D R  K+  K PDF HK+  +ALW+
Sbjct: 289 EGLEFDVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWL 348

Query: 41  DDLRTPAWVIPML 3
           ++  +P WV+P L
Sbjct: 349 NE--SPTWVLPKL 359



 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 17/127 (13%)
 Frame = -2

Query: 506 KWFDNRKTKKCST----YPDFKHKGTHKSLWIEDFKTPTWVAPMLNNL------------ 375
           +W+D+R+ K        +PDFK K +  SLW+   K P WV P L  L            
Sbjct: 246 EWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLN--KAPNWVLPKLEGLEFDVLVPKARVV 303

Query: 374 -QDKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVISMLDK 198
            Q K E  W +   +P KW+DNR  K++ K PDF HK+T +ALW++   +PTWV+  L  
Sbjct: 304 KQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--ESPTWVLPKLPP 361

Query: 197 LKNDASS 177
           +K    S
Sbjct: 362 VKKKQES 368


>ref|XP_002510278.1| conserved hypothetical protein [Ricinus communis]
           gi|223550979|gb|EEF52465.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 378

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 17/140 (12%)
 Frame = -2

Query: 383 NNLQD--KRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWVIS 210
           NN+++   R +LW  +F  P +W+D RK+K++ + PDF HK   + LW+    +P WV  
Sbjct: 210 NNMENYKNRLDLWQLFFCKPCEWWDKRKSKQNPELPDFKHKYNGENLWL-RPDDPPWVKR 268

Query: 209 MLDKLKNDASSASQTT-------------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTH 69
            L  L  + +   Q                +LW+ FF++P  W+D RK K   + PDF H
Sbjct: 269 HLQLLDMEIAKQRQANGVGKSGMMRYSNRHHLWQVFFSNPHEWWDNRKNKTNRRSPDFKH 328

Query: 68  KDCNKALWI--DDLRTPAWV 15
           KD  +ALWI  DD   P WV
Sbjct: 329 KDTGEALWIMRDD---PPWV 345



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 29/150 (19%)
 Frame = -2

Query: 506 KWFDNRKTKKCSTYPDFKHKGTHKSLWIEDFKTPTWVAPMLNNLQ--------------- 372
           +W+D RK+K+    PDFKHK   ++LW+     P WV   L  L                
Sbjct: 231 EWWDKRKSKQNPELPDFKHKYNGENLWLRP-DDPPWVKRHLQLLDMEIAKQRQANGVGKS 289

Query: 371 -----DKRENLWNNYFTDPSKWFDNRKTKKSNKHPDFVHKDTHDALWIDNTRNPTWV--- 216
                  R +LW  +F++P +W+DNRK K + + PDF HKDT +ALWI    +P WV   
Sbjct: 290 GMMRYSNRHHLWQVFFSNPHEWWDNRKNKTNRRSPDFKHKDTGEALWIMRD-DPPWVKRQ 348

Query: 215 ISMLDKL------KNDASSASQTTENLWKA 144
           + +LD +      +    S SQ +E ++ A
Sbjct: 349 LKLLDFIMAEQCVREKVGSGSQLSEWIFDA 378