BLASTX nr result
ID: Ephedra28_contig00016893
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00016893
(962 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR17440.1| unknown [Picea sitchensis] 287 4e-75
ref|XP_001754105.1| predicted protein [Physcomitrella patens] gi... 222 1e-55
ref|XP_001700791.1| hypothetical protein CHLREDRAFT_155892 [Chla... 192 2e-46
ref|XP_002503679.1| RNA polymerase [Micromonas sp. RCC299] gi|22... 184 3e-44
ref|XP_003055453.1| predicted protein [Micromonas pusilla CCMP15... 176 9e-42
ref|XP_001422238.1| predicted protein [Ostreococcus lucimarinus ... 171 3e-40
ref|XP_003084167.1| RNA polymerase III, subunit C34 (ISS) [Ostre... 171 3e-40
ref|XP_005849549.1| hypothetical protein CHLNCDRAFT_59631 [Chlor... 167 7e-39
ref|XP_006845803.1| hypothetical protein AMTR_s00019p00255850 [A... 165 3e-38
ref|XP_005649155.1| RNA polymerase Rpc34 [Coccomyxa subellipsoid... 164 4e-38
ref|XP_785983.3| PREDICTED: DNA-directed RNA polymerase III subu... 161 4e-37
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s... 160 9e-37
ref|XP_002954233.1| hypothetical protein VOLCADRAFT_118667 [Volv... 159 1e-36
gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus... 157 7e-36
gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Mor... 154 5e-35
ref|XP_002731250.1| PREDICTED: DNA-directed RNA polymerase III s... 152 1e-34
gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus pe... 152 2e-34
ref|XP_001515545.2| PREDICTED: DNA-directed RNA polymerase III s... 151 4e-34
gb|ETV84606.1| hypothetical protein H257_03769 [Aphanomyces astaci] 150 5e-34
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 150 5e-34
>gb|ABR17440.1| unknown [Picea sitchensis]
Length = 262
Score = 287 bits (735), Expect = 4e-75
Identities = 140/244 (57%), Positives = 184/244 (75%), Gaps = 2/244 (0%)
Frame = -1
Query: 728 MEENLRDVSLEVRVQAINRLSKAGQLEFYKQGSFNVYKILRKELSDKLSGLSQEDRIVYQ 549
MEENL+DV L VR QA+N L + QL+ +KQG F VYK KE S + GLS ED ++YQ
Sbjct: 1 MEENLKDVDLNVRAQALNALLQKRQLQIFKQGDFIVYKQQTKEESVRFKGLSSEDMLIYQ 60
Query: 548 AIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLETRAMIKQIK--NSQGKKVFMLAELSP 375
AI+ AGN GIWT +KRETNL +PQ KALKNLE R +IK +K ++Q KKV+MLAEL+P
Sbjct: 61 AIKNAGNMGIWTKDMKRETNLQQPQVNKALKNLEARGLIKGVKCVSNQAKKVYMLAELTP 120
Query: 374 SDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQKKLATLESIADLVKSSGILKEQIKIDA 195
S ++TGG +YT D E NIVK CL+ V Q+ +AT+ES+AD V+ SGI K ++K++
Sbjct: 121 SKEITGGAWYTGQNFDTEFTNIVKQQCLQFVLQQGVATIESVADFVRKSGISKVELKVEE 180
Query: 194 VKQVMDMLIIDHEVEEVTSTGKGEFSSIPMNTQCYRVSQIRAQETSAFTNVPCGICPVLH 15
+KQ++DML++D +VEEV STG G+F++IP+N CYR SQ R QE+SAFTN+PCG+CPVL
Sbjct: 181 LKQILDMLVLDGDVEEVISTGTGDFAAIPINKLCYRGSQARIQESSAFTNIPCGVCPVLR 240
Query: 14 ECTE 3
ECT+
Sbjct: 241 ECTD 244
>ref|XP_001754105.1| predicted protein [Physcomitrella patens]
gi|162694659|gb|EDQ81006.1| predicted protein
[Physcomitrella patens]
Length = 361
Score = 222 bits (566), Expect = 1e-55
Identities = 115/248 (46%), Positives = 169/248 (68%), Gaps = 2/248 (0%)
Frame = -1
Query: 746 GLTDKMMEENLRDVSLEVRVQAINRLSKAGQLEFYKQGSFNVYKILRKELSDKLSGLSQE 567
GL ++++E + D LE+ QA+N L +L + QG VYK +++ K GLS E
Sbjct: 101 GLPQRVLDEEIPD--LEMLSQALNFLLSKQKLVVFTQGDNIVYKEQSADVAVKFKGLSSE 158
Query: 566 DRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLETRAMIKQIKN--SQGKKVFM 393
D +VYQ+I+ A N GIWT +KR TNL +PQ KALKNLE R+++K +K ++ +KV+M
Sbjct: 159 DMLVYQSIEAAANQGIWTADLKRRTNLQQPQINKALKNLEGRSLVKAVKTVTNKNRKVYM 218
Query: 392 LAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQKKLATLESIADLVKSSGILKE 213
L +L+PS ++TGG +YT+ D E +++VK CL+ + ++ LA LE+IAD +K SGI +
Sbjct: 219 LFDLTPSREVTGGAWYTEQDYDAEFVDVVKQQCLQFITRQGLADLEAIADAIKKSGITQV 278
Query: 212 QIKIDAVKQVMDMLIIDHEVEEVTSTGKGEFSSIPMNTQCYRVSQIRAQETSAFTNVPCG 33
++ ++ KQ+MD L++D +VEE + G G +SS +T CYRV++ R ETSA TNVPCG
Sbjct: 279 ELGLEEFKQIMDTLVLDGDVEE--TMGGGTYSS---DTLCYRVAKARIPETSALTNVPCG 333
Query: 32 ICPVLHEC 9
ICPVLHEC
Sbjct: 334 ICPVLHEC 341
>ref|XP_001700791.1| hypothetical protein CHLREDRAFT_155892 [Chlamydomonas reinhardtii]
gi|158281290|gb|EDP07045.1| predicted protein
[Chlamydomonas reinhardtii]
Length = 285
Score = 192 bits (487), Expect = 2e-46
Identities = 99/271 (36%), Positives = 165/271 (60%), Gaps = 3/271 (1%)
Frame = -1
Query: 812 VSAAQLNSAINQILELSKAHPNGLTDKMMEENLRDVSLEVRVQAINRLSKAGQLEFYKQG 633
++AA+ Q+L+L + HP G+TD +E L V L+ RV A+N L A +L+ K
Sbjct: 1 MAAAKEKQLEEQLLQLLRQHPQGMTDDALESALPAVPLQERVHAVNSLLAASRLQLLKTS 60
Query: 632 SFN-VYKILRKELSDKLSGLSQEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALK 456
+ VYK + E + K GLS E+ ++YQ I+ AGN G+WT ++ TNLA+PQ K LK
Sbjct: 61 NGKLVYKEVAVEEAAKFKGLSPEELLIYQCIKTAGNTGVWTKDMRIRTNLAQPQITKILK 120
Query: 455 NLETRAMIKQIKN--SQGKKVFMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIV 282
LE R ++K +KN S +KV+MLAEL PS +LTGG +YT+N+ D E IN++++ C +
Sbjct: 121 VLEGRKLVKAVKNVNSPSRKVYMLAELEPSRELTGGAWYTENQFDSEFINVLREACFSYI 180
Query: 281 AQKKLATLESIADLVKSSGILKEQIKIDAVKQVMDMLIIDHEVEEVTSTGKGEFSSIPMN 102
+++ +L ++A +++ G K +++ + ++ ++ L+ D V+EV G+ + N
Sbjct: 181 SRQGDVSLSAVAAFIRAKGFSKVELRTEDIQTIVMTLVYDGRVDEVEPEGEDD------N 234
Query: 101 TQCYRVSQIRAQETSAFTNVPCGICPVLHEC 9
YR + + +++ T+VPCG+CPV +C
Sbjct: 235 DDHYRPAVLPVPDSTPLTDVPCGVCPVAGQC 265
>ref|XP_002503679.1| RNA polymerase [Micromonas sp. RCC299] gi|226518946|gb|ACO64937.1|
RNA polymerase [Micromonas sp. RCC299]
Length = 307
Score = 184 bits (468), Expect = 3e-44
Identities = 96/275 (34%), Positives = 161/275 (58%), Gaps = 19/275 (6%)
Frame = -1
Query: 776 ILELSKAHPNGLTDKMMEENLRDVSLEVRVQAINRLSKAGQLEFYKQGSFNVYKILRKEL 597
ILE + HP G+ D+ + + + + + R QAIN L + +L+ YK G VY+++ +E
Sbjct: 6 ILEQCRLHPEGIPDQDLAQKISHIPVNDRAQAINSLLSSRKLQIYKDGDTIVYRMVMQEE 65
Query: 596 SDKLSGLSQEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLETRAMIKQIKN 417
+ K GL+ ED +VYQ IQ++GN+GIWT +K+ +NLA+ Q K K+LE+R +IK +K+
Sbjct: 66 AVKFRGLASEDLLVYQIIQQSGNSGIWTKELKQRSNLAQAQITKIFKSLESRKLIKAVKS 125
Query: 416 --SQGKKVFMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQKKLATLESIAD 243
Q +KV+ML EL PS ++TGG +YT+++ D E IN++++ C + + + TL+ ++D
Sbjct: 126 VSQQNRKVYMLYELEPSREITGGAWYTEHEYDAEFINVLREQCEKFIVGQGKVTLDQVSD 185
Query: 242 LVKSSGILKEQIKIDAVKQVMDMLIIDHEVEEVTSTGKGEFSSIPMN------------- 102
VK + + ++ + V Q+++ L+ D +V++ KGE +
Sbjct: 186 FVKKTKLSHVELGKEEVLQIVNTLVYDGKVDQFDEHEKGEGDADDAKGDGDVGNDERDYG 245
Query: 101 ----TQCYRVSQIRAQETSAFTNVPCGICPVLHEC 9
Y + E SAFT+VPCG+CPV +EC
Sbjct: 246 DGEKVTYYVPAAYPVPEKSAFTSVPCGVCPVFNEC 280
>ref|XP_003055453.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463427|gb|EEH60705.1| predicted protein
[Micromonas pusilla CCMP1545]
Length = 294
Score = 176 bits (447), Expect = 9e-42
Identities = 92/266 (34%), Positives = 152/266 (57%), Gaps = 10/266 (3%)
Frame = -1
Query: 776 ILELSKAHPNGLTDKMMEENLRDVSLEVRVQAINRLSKAGQLEFYKQGSFNVYKILRKEL 597
ILE + HP G+ D + + + + R AIN L + +++ YK G +Y+ ++K+
Sbjct: 6 ILEQCRLHPQGIPDADLAMEIAHIPVNERASAINALLSSRKIQVYKDGDSLIYREVQKDE 65
Query: 596 SDKLSGLSQEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLETRAMIKQIKN 417
+ K GLS ED +VYQ IQ +GN GIWT +K+++NL + Q K K LE R +IK +KN
Sbjct: 66 AVKFKGLSSEDLLVYQIIQSSGNTGIWTKELKQKSNLPQTQITKIFKVLEARKLIKSVKN 125
Query: 416 --SQGKKVFMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQKKLATLESIAD 243
Q +KV+ML EL PS ++TGG +YT+++ D E I+++++ C + + + ATL+ + D
Sbjct: 126 VAQQNRKVYMLFELEPSREITGGAWYTEHEYDAEFISVLREQCDKFINSRGKATLDDVWD 185
Query: 242 LVKSSGILKEQIKIDAVKQVMDMLIIDHEVEEV--------TSTGKGEFSSIPMNTQCYR 87
VK + + + + V Q+++ L+ D +++ + + KG+ + Y
Sbjct: 186 FVKRAKLSNVDLGKEEVLQIVNTLVYDGKIDAIEVPDPNFKPTAKKGKDIDAGHEGEDYS 245
Query: 86 VSQIRAQETSAFTNVPCGICPVLHEC 9
+ I SA TNVPCG+CPV EC
Sbjct: 246 PAAIPIPSESALTNVPCGLCPVFEEC 271
>ref|XP_001422238.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582478|gb|ABP00555.1| predicted protein
[Ostreococcus lucimarinus CCE9901]
Length = 259
Score = 171 bits (434), Expect = 3e-40
Identities = 85/239 (35%), Positives = 148/239 (61%), Gaps = 6/239 (2%)
Frame = -1
Query: 707 VSLEVRVQAINRLSKAGQLEFYKQGSFNVYKILRKELSDKLSGLSQEDRIVYQAIQRAGN 528
+S+E R +AIN L + +++ + +G VY +R+ + K GLS ED +VYQ IQ AGN
Sbjct: 1 MSVEERAEAINTLLREKKIDVFGRGGGLVYARVREAQAAKFKGLSTEDMLVYQIIQHAGN 60
Query: 527 NGIWTVLIKRETNLAEPQSRKALKNLETRAMIKQIKN--SQGKKVFMLAELSPSDDLTGG 354
G+WT +K+ +NL PQ K K LE R +IK +K+ Q +KV+ML EL PS ++TGG
Sbjct: 61 AGMWTKELKQRSNLPVPQITKIFKTLEARKLIKSVKHVAQQNRKVYMLYELEPSREITGG 120
Query: 353 VFYTDNKLDPELINIVKDVCLRIVAQKKLATLESIADLVKSSGILKEQIKIDAVKQVMDM 174
+YT+ + D E I+++++ C++ + ++ TL+ ++D V++S + + + D V Q+++
Sbjct: 121 AWYTEQEYDAEFISVLREQCVKFIYSRERVTLKEVSDFVRASELSRIDLGQDEVLQIVNT 180
Query: 173 LIIDHEVEEV----TSTGKGEFSSIPMNTQCYRVSQIRAQETSAFTNVPCGICPVLHEC 9
L+ D +V+E+ G G+ Y + + E++A+T++PCG+CPV++EC
Sbjct: 181 LVYDGKVDEIKDESQDDGMGKADEDFQPITFYTRAALPVPESNAYTDIPCGVCPVINEC 239
>ref|XP_003084167.1| RNA polymerase III, subunit C34 (ISS) [Ostreococcus tauri]
gi|116056050|emb|CAL58583.1| RNA polymerase III, subunit
C34 (ISS) [Ostreococcus tauri]
Length = 371
Score = 171 bits (434), Expect = 3e-40
Identities = 88/254 (34%), Positives = 152/254 (59%), Gaps = 7/254 (2%)
Frame = -1
Query: 749 NGLTDKMMEENLRDV-SLEVRVQAINRLSKAGQLEFYKQGSFNVYKILRKELSDKLSGLS 573
NG+ ++ + L V S+ R +AIN L ++E +K+G VY +R+E + K GLS
Sbjct: 98 NGVREQDLATMLHGVMSVNERAEAINALLSERKIEIFKRGDSLVYARVREERAAKFKGLS 157
Query: 572 QEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLETRAMIKQIKN--SQGKKV 399
ED +VYQ IQ AGN G+WT +K+ +NL PQ K K LE R +IK +K+ Q +KV
Sbjct: 158 TEDMLVYQIIQHAGNAGMWTKELKQRSNLPVPQITKIFKTLEARKLIKAVKHVTQQNRKV 217
Query: 398 FMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQKKLATLESIADLVKSSGIL 219
+ML EL PS ++TGG +YT+ D E IN++++ C++ + + TL +++ V+SS +
Sbjct: 218 YMLYELEPSREITGGAWYTEGTHDDEFINVLREQCVKFIYSRDRVTLSEVSEFVRSSKLS 277
Query: 218 KEQIKIDAVKQVMDMLIIDHEVEEVTSTGKGEFSSIP----MNTQCYRVSQIRAQETSAF 51
++ D V Q+++ L+ D +V+E + + ++ + Y + + +++ +
Sbjct: 278 HVELGTDEVLQIVNTLVFDGKVDENEDESQDDGMTVADEDFKAVKYYSRAALPVPDSNPY 337
Query: 50 TNVPCGICPVLHEC 9
T++PCG+CPV++EC
Sbjct: 338 TDIPCGVCPVINEC 351
>ref|XP_005849549.1| hypothetical protein CHLNCDRAFT_59631 [Chlorella variabilis]
gi|307109209|gb|EFN57447.1| hypothetical protein
CHLNCDRAFT_59631 [Chlorella variabilis]
Length = 281
Score = 167 bits (422), Expect = 7e-39
Identities = 95/263 (36%), Positives = 151/263 (57%), Gaps = 5/263 (1%)
Frame = -1
Query: 776 ILELSKAHPNGLTDKMMEENLRDVSLEVRVQAINRLSKAGQLEFY---KQGSFNVYKILR 606
IL + + HP G+ D +E L V++ R AIN L + +L+ S ++YK
Sbjct: 9 ILTVCRKHPEGVQDTALEAELPSVAVNDRAVAINSLLASLKLQILVNPADPSSHIYKASA 68
Query: 605 KELSDKLSGLSQEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLETRAMIKQ 426
+ + GL+ ED +VYQ IQ AGN GIWT +K+ TNL +P+ K LK LE R ++K
Sbjct: 69 VGDATRFKGLTAEDMLVYQCIQGAGNMGIWTRDMKQRTNLQQPKINKILKTLEERCLVKS 128
Query: 425 IKNSQ--GKKVFMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQKKLATLES 252
IK+ Q +KV+ML EL P+ +LTGG +Y + D E I ++++ + + K ATL
Sbjct: 129 IKSVQNASRKVYMLYELEPAKELTGGPWYGPDAFDSEFITVLQEATMSYINTKGDATLAD 188
Query: 251 IADLVKSSGILKEQIKIDAVKQVMDMLIIDHEVEEVTSTGKGEFSSIPMNTQCYRVSQIR 72
I +K +GI K+ ++ D V+++++ L D ++E V +G+ +P YR+ +
Sbjct: 189 IVRFIKETGISKQALQEDDVERIINTLECDGKIEGV----EGDEDGLPH----YRLPLMS 240
Query: 71 AQETSAFTNVPCGICPVLHECTE 3
E + FT++PCG+CPV +EC E
Sbjct: 241 IPEATPFTSIPCGVCPVFNECVE 263
>ref|XP_006845803.1| hypothetical protein AMTR_s00019p00255850 [Amborella trichopoda]
gi|548848375|gb|ERN07478.1| hypothetical protein
AMTR_s00019p00255850 [Amborella trichopoda]
Length = 230
Score = 165 bits (417), Expect = 3e-38
Identities = 81/193 (41%), Positives = 129/193 (66%), Gaps = 2/193 (1%)
Frame = -1
Query: 578 LSQEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLETRAMIKQIKNSQG--K 405
L+ +D+ VY+ I+++GN GIW+ +K+ + E K+LK L ++ +IK + N +
Sbjct: 21 LAHDDKKVYEMIEKSGNKGIWSAEMKKY--IPENILNKSLKLLLSKNLIKLVANVHNPRR 78
Query: 404 KVFMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQKKLATLESIADLVKSSG 225
KV+MLA L PS++++GG +Y+ + D ELI+++K LR + + K+ L+ IAD +K+S
Sbjct: 79 KVYMLANLQPSEEISGGTWYSGKEFDTELIDVLKQHTLRFITKMKVVILDKIADSIKTSE 138
Query: 224 ILKEQIKIDAVKQVMDMLIIDHEVEEVTSTGKGEFSSIPMNTQCYRVSQIRAQETSAFTN 45
ILK +++I VKQV+D LI+D E+E V S G EF SIP CYR ++ E ++F +
Sbjct: 139 ILKVEVRIQEVKQVVDSLILDREIEAVLSNGSAEFLSIPKGKVCYRCRKMGHLEPASFVS 198
Query: 44 VPCGICPVLHECT 6
VPCG+CPV++ECT
Sbjct: 199 VPCGVCPVINECT 211
>ref|XP_005649155.1| RNA polymerase Rpc34 [Coccomyxa subellipsoidea C-169]
gi|384251133|gb|EIE24611.1| RNA polymerase Rpc34
[Coccomyxa subellipsoidea C-169]
Length = 275
Score = 164 bits (416), Expect = 4e-38
Identities = 93/262 (35%), Positives = 153/262 (58%), Gaps = 4/262 (1%)
Frame = -1
Query: 776 ILELSKAHPNGLTDKMMEENLRDVSLEVRVQAINRLSKAGQLEFYKQGSFN--VYKILRK 603
IL L + HP GL + ++E+ + R A+N L +L + N VY+ + +
Sbjct: 9 ILALCRQHPEGLPEAVLEQYIPATQ---RTTAMNNLLAKHRLRILQHPRDNSLVYQEVIQ 65
Query: 602 ELSDKLSGLSQEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLETRAMIKQI 423
E + KL GLS ED +VYQ I +AG+ GIWT +K TNL +PQ K LKNL+ R+++K +
Sbjct: 66 EEAAKLKGLSAEDLLVYQHIAQAGDTGIWTKDLKNRTNLQQPQITKILKNLDQRSLVKSV 125
Query: 422 KN--SQGKKVFMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQKKLATLESI 249
K+ + +KV++L EL P+ +LTGG +YT D E I +++ C + + + +ATLE +
Sbjct: 126 KSVINPSRKVYILFELEPARELTGGAWYTGQDFDAEFIQVLQQACHKYIENEGVATLEEV 185
Query: 248 ADLVKSSGILKEQIKIDAVKQVMDMLIIDHEVEEVTSTGKGEFSSIPMNTQCYRVSQIRA 69
AD V++ G + +++ V ++ L D VE SS+ + + YR ++
Sbjct: 186 ADFVRTKGFSRVELRDADVLCILRTLEFDGLVE----------SSLSDDGEVYRPARHVV 235
Query: 68 QETSAFTNVPCGICPVLHECTE 3
+TS FT++PCG+CPV++EC++
Sbjct: 236 PKTSPFTSMPCGVCPVINECSD 257
>ref|XP_785983.3| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform 1 [Strongylocentrotus purpuratus]
Length = 311
Score = 161 bits (407), Expect = 4e-37
Identities = 89/278 (32%), Positives = 150/278 (53%), Gaps = 19/278 (6%)
Frame = -1
Query: 779 QILELSKAHPNGLTDKMMEENLRDVSLEVRVQAINRLSKAGQLEFYKQGSFNVYKILRKE 600
+ILEL K +P+G+ D +++ L +V RV A+NRL +G+++ K + VY++
Sbjct: 18 RILELCKQNPDGIADSTLQKELPNVDTRQRVSAVNRLLSSGKIDLVKTSNELVYRLKDPG 77
Query: 599 LSDKLSGLSQEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLETRAMIKQIK 420
+ K+ G ++R+VYQ I+++GN GIWT I+ ++NL Q K LKNLE+R +IK +K
Sbjct: 78 VVSKIKGADNQERLVYQIIEQSGNKGIWTRDIRLKSNLQLTQLNKILKNLESRKLIKAVK 137
Query: 419 N--SQGKKVFMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQK--------- 273
+ + KK +ML L+P +TGG +Y+D + + E + ++ C + + QK
Sbjct: 138 SVGAARKKAYMLFNLTPDPSVTGGTWYSDQEFESEFVEVLNHQCFKFLQQKVESVSALQL 197
Query: 272 --------KLATLESIADLVKSSGILKEQIKIDAVKQVMDMLIIDHEVEEVTSTGKGEFS 117
+ E + + I K + +D + +++ LI D +VE S G G S
Sbjct: 198 DPLLKRNRSFVSPEEVWKFITELRISKVDLSVDDINTILNTLIYDGKVEMTISAGAGT-S 256
Query: 116 SIPMNTQCYRVSQIRAQETSAFTNVPCGICPVLHECTE 3
S +++ YR Q Q T + PCG+CPV ++C E
Sbjct: 257 SSDSSSKLYRAIQPLTQPTGLMRS-PCGVCPVFNQCYE 293
>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Glycine max]
Length = 239
Score = 160 bits (404), Expect = 9e-37
Identities = 80/217 (36%), Positives = 136/217 (62%), Gaps = 6/217 (2%)
Frame = -1
Query: 638 QGSFNVYKILRKELSDKLSGLSQEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKAL 459
QGS ++ K R++L+ L+ +R++Y I + GIWT +KRETNL + +K+L
Sbjct: 5 QGSSSL-KRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSL 63
Query: 458 KNLETRAMIKQIKNSQ--GKKVFMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRI 285
K L+++ +IK++ N Q G+K +M AE PS ++TGGV+Y +LD + IN+VKDVCL+
Sbjct: 64 KLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVCLKY 123
Query: 284 VAQKKLATLESIADLVKSSGILKEQIKIDAVKQVMDMLIIDHEVEEVTSTGKGEFSSIPM 105
+ ++K+AT + + + + SG+ ++ + +++ L++D E+ EV STG G+FSS+P+
Sbjct: 124 IFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSSVPV 183
Query: 104 NTQCYRVSQIRA----QETSAFTNVPCGICPVLHECT 6
CYR Q+ A ++PCG+CP ++ CT
Sbjct: 184 GRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCT 220
>ref|XP_002954233.1| hypothetical protein VOLCADRAFT_118667 [Volvox carteri f.
nagariensis] gi|300260438|gb|EFJ44657.1| hypothetical
protein VOLCADRAFT_118667 [Volvox carteri f.
nagariensis]
Length = 271
Score = 159 bits (403), Expect = 1e-36
Identities = 93/272 (34%), Positives = 151/272 (55%), Gaps = 5/272 (1%)
Frame = -1
Query: 803 AQLNSAINQILELSKAHPNGLTDKMMEENLRDVSLEVRVQAINRLSKAGQLEFYKQGSFN 624
A S +L L + +P G+TD+ + L V +E RV A+N L A +L+ K S
Sbjct: 2 AAARSVEEDLLRLLRQNPQGVTDEALSAALPGVPIEERVNAVNSLLAANRLQLLKNSSNK 61
Query: 623 -VYKILRKELSDKLSGLSQEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLE 447
VYK + E + K GLS E+ ++YQ I+ AGN G+ P K LK LE
Sbjct: 62 IVYKEVAAEEAAKFKGLSTEELLLYQCIKAAGNTGM-------------PGITKILKVLE 108
Query: 446 TRAMIKQIKN--SQGKKVFMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQK 273
+R ++K +KN + +KV+ML+EL PS +LTGG +YT+N+ D E IN++++ C + +K
Sbjct: 109 SRRLVKSVKNVNNPSRKVYMLSELEPSRELTGGAWYTENQFDSEFINVLREACYSYIKRK 168
Query: 272 K--LATLESIADLVKSSGILKEQIKIDAVKQVMDMLIIDHEVEEVTSTGKGEFSSIPMNT 99
++L IA ++S G K +++I+ + ++ L+ D V+EV G +
Sbjct: 169 DKVSSSLGEIAAFIRSRGFSKVELRIEDIHTIIMTLVYDGRVDEVEPEGDED-------E 221
Query: 98 QCYRVSQIRAQETSAFTNVPCGICPVLHECTE 3
YR++ + ++++ T+VPCG+CPV EC E
Sbjct: 222 DHYRLAVLGIPDSTSLTDVPCGVCPVAGECAE 253
>gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
Length = 239
Score = 157 bits (396), Expect = 7e-36
Identities = 75/207 (36%), Positives = 130/207 (62%), Gaps = 6/207 (2%)
Frame = -1
Query: 608 RKELSDKLSGLSQEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLETRAMIK 429
R++L+ ++ +R++Y I + GIWT +KRETNL + +K+LK L+++ +IK
Sbjct: 14 RQDLALVSGSMTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSLKLLQSKNLIK 73
Query: 428 QIKNSQ--GKKVFMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQKKLATLE 255
++ N Q G+K +M AE PS ++TGG +YT LD + IN+VK+VCL+ + ++K+AT +
Sbjct: 74 EVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEVCLKCIFRQKVATHD 133
Query: 254 SIADLVKSSGILKEQIKIDAVKQVMDMLIIDHEVEEVTSTGKGEFSSIPMNTQCYRVSQI 75
+ + + SG+ ++ + +++ L++D E+EEV STG G+FSS+P+ CYR
Sbjct: 134 GVLEWSRKSGVFTVEVTAQQIDEILRALVLDDEIEEVKSTGLGDFSSVPVGRICYRCKSK 193
Query: 74 RA----QETSAFTNVPCGICPVLHECT 6
Q+ A ++PCG+CP ++ CT
Sbjct: 194 GGNRGEQKPGAMASIPCGVCPRINFCT 220
>gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
Length = 238
Score = 154 bits (389), Expect = 5e-35
Identities = 74/199 (37%), Positives = 130/199 (65%), Gaps = 5/199 (2%)
Frame = -1
Query: 587 LSGLSQEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLETRAMIKQIKNSQ- 411
L L++ +RI+Y I+ + GIW +KR + + + KALK+LET+ +IK++ N Q
Sbjct: 21 LDSLTEHERIIYNVIRSKQDMGIWMQDMKRVAKVPDNVANKALKSLETKKLIKEVVNIQK 80
Query: 410 -GKKVFMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQKKLATLESIADLVK 234
GKK ++ AE P+ ++TGG +Y++ K+D +INI+KD CL+ + ++++ATLE I D ++
Sbjct: 81 RGKKHYVAAEFEPATEITGGAWYSNGKMDFVVINILKDQCLKWIYKQRVATLEGILDAIR 140
Query: 233 SSGILKEQIKIDAVKQVMDMLIIDHEVEEVTSTGKGEFSSIPMNTQCYRVSQIRAQ---E 63
SGI ++ +++++ L++D+EV EV S G GEF SIP+ CY+ + ++ +
Sbjct: 141 KSGISNVELTTVQIEELVRALVLDNEVVEVKSNGMGEFDSIPVGKVCYKSTSKGSRGDPK 200
Query: 62 TSAFTNVPCGICPVLHECT 6
A +++PCG+CP + +CT
Sbjct: 201 IGAMSSIPCGVCPRISDCT 219
>ref|XP_002731250.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Saccoglossus kowalevskii]
Length = 309
Score = 152 bits (385), Expect = 1e-34
Identities = 84/279 (30%), Positives = 151/279 (54%), Gaps = 19/279 (6%)
Frame = -1
Query: 782 NQILELSKAHPNGLTDKMMEENLRDVSLEVRVQAINRLSKAGQLEFYKQGSFNVYKILRK 603
N+I+EL ++ P G+ D +++E++ + + R AINRL AG+++ K + VYK+
Sbjct: 19 NRIIELCRSDPKGIGDAIIQEDMPHIDVRQRATAINRLLSAGRIDLLKTTAGLVYKLKDP 78
Query: 602 ELSDKLSGLSQEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLETRAMIKQI 423
+ S K+ G +++++YQ I+ AGN GIW I+ ++NL Q K L+NLE++ +IK I
Sbjct: 79 QTSSKMKGSDNQEKLIYQIIEEAGNKGIWIRDIRYKSNLLMTQVSKILRNLESKKLIKAI 138
Query: 422 KN--SQGKKVFMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQKKL------ 267
K+ + KKV+ML + P +TGG +Y+D + E + ++ C++ + Q ++
Sbjct: 139 KSVGASKKKVYMLYNIDPDRSVTGGAWYSDQDFESEFVEVLNQQCMKFLHQTRVNAENSK 198
Query: 266 -----------ATLESIADLVKSSGILKEQIKIDAVKQVMDMLIIDHEVEEVTSTGKGEF 120
A+ + + GI K Q+ ++ ++ +++ LI D++V EVT E
Sbjct: 199 HDPITKRNASYASSNEVWKFISELGISKVQLSVEDIETILNTLIYDNKV-EVTVVASVES 257
Query: 119 SSIPMNTQCYRVSQIRAQETSAFTNVPCGICPVLHECTE 3
I + YR ++ + T CG+CPV +EC E
Sbjct: 258 GQIKL----YRSIELLIEPT-GLMRTACGVCPVFNECQE 291
>gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
Length = 236
Score = 152 bits (383), Expect = 2e-34
Identities = 78/203 (38%), Positives = 124/203 (61%), Gaps = 6/203 (2%)
Frame = -1
Query: 596 SDKLSGLSQEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLETRAMIKQIKN 417
S L++ ++IVY I+ + GIWT +K+E NL + K++K+L+ + +IK++ N
Sbjct: 15 SSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSLQAKNLIKEVVN 74
Query: 416 --SQGKKVFMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQKKLATLESIAD 243
S+G+K +M AE PS +LTGG +Y++ LD I+ VKD +I+ Q K+ATLE I+D
Sbjct: 75 VQSKGRKHYMAAEFEPSKELTGGDWYSNGTLDKYYISCVKDGFAKIIYQLKVATLEGISD 134
Query: 242 LVKSSGILKEQIKIDAVKQVMDMLIIDHEVEEVTSTGKGEFSSIPMNTQCYRVS----QI 75
VK SGI K +++++ +L++D V EV STG GEF S P+ CY+ +
Sbjct: 135 EVKKSGIFKTSFTKQQIEEILRVLVLDKRVTEVKSTGMGEFGSFPVGKVCYKSTSKGGSK 194
Query: 74 RAQETSAFTNVPCGICPVLHECT 6
R + A ++PCG+CP + +CT
Sbjct: 195 REPKVGAMASIPCGVCPRISQCT 217
>ref|XP_001515545.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC6
[Ornithorhynchus anatinus]
Length = 316
Score = 151 bits (381), Expect = 4e-34
Identities = 83/280 (29%), Positives = 148/280 (52%), Gaps = 20/280 (7%)
Frame = -1
Query: 782 NQILELSKAHPNGLTDKMMEENLRDVSLEVRVQAINRLSKAGQLEFYKQGSFNVYKILRK 603
N+I+EL P+G+TD++++ + + + R AINRL GQL+ + + +Y+I
Sbjct: 20 NRIIELCHQFPHGITDQVIQNEMPHIEAQQRAMAINRLLSMGQLDLLRSNTGLLYRIKES 79
Query: 602 ELSDKLSGLSQEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLETRAMIKQI 423
+ + K+ G ++++VYQ I+ AGN GIW+ I+ ++NL + K LKNLE++ +IK +
Sbjct: 80 QSTGKMKGSDNQEKLVYQIIEDAGNKGIWSRDIRYKSNLPLTEINKILKNLESKKLIKAV 139
Query: 422 KN--SQGKKVFMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQKKLATLES- 252
K+ + KKV+ML L P +TGG +Y+D + E + ++ C + + K A ES
Sbjct: 140 KSVAASKKKVYMLYNLQPDRSVTGGAWYSDQDFESEFVEVLNQQCFKFLQSKAEAARESK 199
Query: 251 ----------------IADLVKSSGILKEQIKIDAVKQVMDMLIIDHEVE-EVTSTGKGE 123
+ + GI K ++ ++ ++ +++ LI D +VE + + +G
Sbjct: 200 QNPMIQRNSSFASSHEVWKYICELGISKVELSMEDIETILNTLIYDGKVEMTIIAAKEGT 259
Query: 122 FSSIPMNTQCYRVSQIRAQETSAFTNVPCGICPVLHECTE 3
S+ + + YR Q T PCG+CPV +C E
Sbjct: 260 VGSVDGHMKLYRAVNPIIQPT-GLVRAPCGLCPVFDDCHE 298
>gb|ETV84606.1| hypothetical protein H257_03769 [Aphanomyces astaci]
Length = 283
Score = 150 bits (380), Expect = 5e-34
Identities = 85/261 (32%), Positives = 150/261 (57%), Gaps = 4/261 (1%)
Frame = -1
Query: 773 LELSKAHPNGLTDKMMEENLRDVSLEVRVQAINRLSKAGQLEFYKQGSFNVYKILRKELS 594
L+L + + ++D + ++ R + IN L G+++ ++QGS +Y ++ KE +
Sbjct: 8 LDLLGSSSDAISDAQVRDSFR-AEYDKLPAVINDLVSDGRIKIFQQGSNLMYGLVAKEEA 66
Query: 593 DKLSGLSQEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLETRAMIKQIK-- 420
+++ GL+ E R V I++AGN GIWT IK +TN+ E RK ++ LETR ++K +K
Sbjct: 67 ERMRGLTVEQRGVLHEIEKAGNKGIWTRDIKTKTNIPEVIIRKTIRLLETRHLVKAVKSI 126
Query: 419 NSQGKKVFMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQKKLATLESIADL 240
+ + KK++ML +L PS D+TGG +Y + + D + I+ +++ + + K + TL+ I D
Sbjct: 127 SQKNKKLYMLFDLVPSRDITGGPWYNEQEFDHDFIDTLRNFVCQFIRAKGIVTLKQITDK 186
Query: 239 VKSSGILKEQIKIDAVKQVMDMLIIDHEVEEVTST--GKGEFSSIPMNTQCYRVSQIRAQ 66
V SGI K + D + +++ LI D VEEV + GE+ + Y+VS+
Sbjct: 187 VHESGIAKVSLGPDEMMSILNTLIYDDRVEEVRAARLANGEWRDV-----SYKVSR-EVT 240
Query: 65 ETSAFTNVPCGICPVLHECTE 3
+ + ++ PCGICPV +C +
Sbjct: 241 DFDSLSDTPCGICPVFDQCAD 261
>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 150 bits (380), Expect = 5e-34
Identities = 72/198 (36%), Positives = 121/198 (61%), Gaps = 7/198 (3%)
Frame = -1
Query: 578 LSQEDRIVYQAIQRAGNNGIWTVLIKRETNLAEPQSRKALKNLETRAMIKQIKN--SQGK 405
L +R++Y I+ + GIWT +KRETNL + K+LK L+ + +IK++ N S+G+
Sbjct: 23 LLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQVKKLIKEVVNIQSKGR 82
Query: 404 KVFMLAELSPSDDLTGGVFYTDNKLDPELINIVKDVCLRIVAQKKLATLESIADLVKSSG 225
K +M E PS +LTGG +Y + LD E I I+K+ C+R++++ K+AT E I++ + +G
Sbjct: 83 KHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVRVLSKLKVATAEGISESINKTG 142
Query: 224 ILKEQIKIDAVKQVMDMLIIDHEVEEVTSTGKGEFSSIPMNTQCYRVSQI-----RAQET 60
+ + + +++ L++D+E+ EV S+G GEFSSIP+ CYR +
Sbjct: 143 LCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNKGGLGGGGPTI 202
Query: 59 SAFTNVPCGICPVLHECT 6
A ++PCG+CP + +CT
Sbjct: 203 GAMASIPCGVCPRITQCT 220