BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00016795
         (626 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76199.1| unknown [Picea sitchensis]                             184   2e-44
ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like...   168   1e-39
ref|XP_006436267.1| hypothetical protein CICLE_v10033672mg [Citr...   168   1e-39
ref|XP_006485879.1| PREDICTED: RNA pseudouridine synthase 5-like...   163   3e-38
ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [...   162   6e-38
ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [...   161   1e-37
ref|XP_006346978.1| PREDICTED: RNA pseudouridine synthase 5-like...   159   5e-37
ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like...   159   5e-37
ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like...   159   5e-37
ref|XP_006403820.1| hypothetical protein EUTSA_v10010446mg [Eutr...   159   5e-37
ref|NP_974416.1| RNA pseudourine synthase 5 [Arabidopsis thalian...   159   5e-37
emb|CAC07917.1| putative protein [Arabidopsis thaliana]               159   5e-37
ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [...   159   6e-37
ref|XP_004307403.1| PREDICTED: RNA pseudourine synthase 5-like [...   158   1e-36
gb|EXB80105.1| RNA pseudourine synthase 5 [Morus notabilis]           157   2e-36
ref|XP_006291291.1| hypothetical protein CARUB_v10017427mg [Caps...   157   3e-36
ref|XP_004496322.1| PREDICTED: RNA pseudourine synthase 5-like [...   154   2e-35
ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Popu...   154   3e-35
ref|XP_002877851.1| pseudouridine synthase family protein [Arabi...   152   6e-35
gb|EOY18594.1| Pseudouridine synthase family protein [Theobroma ...   151   1e-34

>gb|ADE76199.1| unknown [Picea sitchensis]
          Length = 386

 Score =  184 bits (467), Expect = 2e-44
 Identities = 87/142 (61%), Positives = 109/142 (76%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           GK++Y GV SGLYVA+PTGKQAES++ VL RDK RNCTLVEVEIYSGR HQIRIH+++IG
Sbjct: 230 GKMRYPGVRSGLYVASPTGKQAESRITVLSRDKNRNCTLVEVEIYSGRPHQIRIHLSFIG 289

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           HPL+GDPLYV+GG+P                  FAEDGGY++    +PGDCGY+LHAY++
Sbjct: 290 HPLLGDPLYVAGGRP--SITVSDSYSESREGDNFAEDGGYQKPLNPVPGDCGYYLHAYRL 347

Query: 363 ILQHPISNKVMKIVAPPPTTLS 428
              HP+S++V++IVAPPP  LS
Sbjct: 348 AFHHPVSDEVVEIVAPPPPMLS 369


>ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X2 [Citrus
           sinensis] gi|568865018|ref|XP_006485881.1| PREDICTED:
           RNA pseudouridine synthase 5-like isoform X3 [Citrus
           sinensis]
          Length = 389

 Score =  168 bits (425), Expect = 1e-39
 Identities = 82/141 (58%), Positives = 103/141 (73%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G ++Y GVA GLYVA+P+GK A S+V VL RD +RNCTLV+VEI SGR HQIRIH+A++G
Sbjct: 229 GIVRYPGVAKGLYVASPSGKPALSKVDVLERDVQRNCTLVQVEIQSGRPHQIRIHLAFLG 288

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           HPL+GDPLYV+GG+P                  FA+DGGYER    +PGDCGY+LHAYQ+
Sbjct: 289 HPLLGDPLYVAGGQP-------KSFDSEFADGTFAQDGGYERPVNPVPGDCGYYLHAYQL 341

Query: 363 ILQHPISNKVMKIVAPPPTTL 425
            L HP +N+V+KI AP P+ L
Sbjct: 342 FLSHPTTNEVIKITAPLPSVL 362


>ref|XP_006436267.1| hypothetical protein CICLE_v10033672mg [Citrus clementina]
           gi|557538463|gb|ESR49507.1| hypothetical protein
           CICLE_v10033672mg [Citrus clementina]
          Length = 312

 Score =  168 bits (425), Expect = 1e-39
 Identities = 82/141 (58%), Positives = 103/141 (73%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G ++Y GVA GLYVA+P+GK A S+V VL RD +RNCTLV+VEI SGR HQIRIH+A++G
Sbjct: 152 GIVRYPGVAKGLYVASPSGKPALSKVDVLERDVQRNCTLVQVEIQSGRPHQIRIHLAFLG 211

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           HPL+GDPLYV+GG+P                  FA+DGGYER    +PGDCGY+LHAYQ+
Sbjct: 212 HPLLGDPLYVAGGQP-------KSFDSEFADGTFAQDGGYERPVNPVPGDCGYYLHAYQL 264

Query: 363 ILQHPISNKVMKIVAPPPTTL 425
            L HP +N+V+KI AP P+ L
Sbjct: 265 FLSHPTTNEVIKITAPLPSVL 285


>ref|XP_006485879.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Citrus
           sinensis]
          Length = 390

 Score =  163 bits (413), Expect = 3e-38
 Identities = 82/142 (57%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVE-VEIYSGRAHQIRIHMAYI 179
           G ++Y GVA GLYVA+P+GK A S+V VL RD +RNCTLV+ VEI SGR HQIRIH+A++
Sbjct: 229 GIVRYPGVAKGLYVASPSGKPALSKVDVLERDVQRNCTLVQQVEIQSGRPHQIRIHLAFL 288

Query: 180 GHPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQ 359
           GHPL+GDPLYV+GG+P                  FA+DGGYER    +PGDCGY+LHAYQ
Sbjct: 289 GHPLLGDPLYVAGGQP-------KSFDSEFADGTFAQDGGYERPVNPVPGDCGYYLHAYQ 341

Query: 360 VILQHPISNKVMKIVAPPPTTL 425
           + L HP +N+V+KI AP P+ L
Sbjct: 342 LFLSHPTTNEVIKITAPLPSVL 363


>ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  162 bits (411), Expect = 6e-38
 Identities = 83/141 (58%), Positives = 102/141 (72%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G++QY GVA GLYVATP+GK A S+V VL RD++   TLV+VEI SGR HQIRIH++ IG
Sbjct: 227 GRMQYPGVAQGLYVATPSGKPACSKVNVLERDEQSKHTLVQVEIQSGRPHQIRIHLSSIG 286

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           HPLVGDPLYV+GG+P                  FAEDGGYER    +PGDCGY+LHA+Q+
Sbjct: 287 HPLVGDPLYVAGGQP-------NCLHSEVVNQSFAEDGGYERPTKPVPGDCGYYLHAHQL 339

Query: 363 ILQHPISNKVMKIVAPPPTTL 425
           IL HP +N+V+KI+AP P  L
Sbjct: 340 ILYHPKTNEVVKIIAPLPPIL 360


>ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  161 bits (408), Expect = 1e-37
 Identities = 82/141 (58%), Positives = 102/141 (72%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G++QY GVA GLYVATP+GK A S+V VL RD++   TLV+VEI SGR HQIRIH++ IG
Sbjct: 227 GRMQYPGVAQGLYVATPSGKPACSKVNVLERDEQSKHTLVQVEIQSGRPHQIRIHLSSIG 286

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           HPL+GDPLYV+GG+P                  FAEDGGYER    +PGDCGY+LHA+Q+
Sbjct: 287 HPLLGDPLYVAGGQP-------NCLHSEVVNQSFAEDGGYERPTKPVPGDCGYYLHAHQL 339

Query: 363 ILQHPISNKVMKIVAPPPTTL 425
           IL HP +N+V+KI+AP P  L
Sbjct: 340 ILYHPKTNEVVKIIAPLPPIL 360


>ref|XP_006346978.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X4 [Solanum
           tuberosum]
          Length = 349

 Score =  159 bits (403), Expect = 5e-37
 Identities = 79/141 (56%), Positives = 100/141 (70%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G I+Y GVA GLYVA+P+GK A S V VL RD + NCTLV+VEI SGR HQIRIH+++IG
Sbjct: 207 GTIKYPGVAKGLYVASPSGKPALSSVRVLERDSENNCTLVQVEIQSGRPHQIRIHLSFIG 266

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           +PL+GDPLYVSGG+P                  F +DGGY+R    +PGDCGY+LHA+Q+
Sbjct: 267 YPLIGDPLYVSGGQP-------KCFHPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQI 319

Query: 363 ILQHPISNKVMKIVAPPPTTL 425
            L HPI+N+++KI AP P  L
Sbjct: 320 GLIHPITNELIKITAPLPAIL 340


>ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X3 [Solanum
           tuberosum]
          Length = 374

 Score =  159 bits (403), Expect = 5e-37
 Identities = 79/141 (56%), Positives = 100/141 (70%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G I+Y GVA GLYVA+P+GK A S V VL RD + NCTLV+VEI SGR HQIRIH+++IG
Sbjct: 232 GTIKYPGVAKGLYVASPSGKPALSSVRVLERDSENNCTLVQVEIQSGRPHQIRIHLSFIG 291

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           +PL+GDPLYVSGG+P                  F +DGGY+R    +PGDCGY+LHA+Q+
Sbjct: 292 YPLIGDPLYVSGGQP-------KCFHPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQI 344

Query: 363 ILQHPISNKVMKIVAPPPTTL 425
            L HPI+N+++KI AP P  L
Sbjct: 345 GLIHPITNELIKITAPLPAIL 365


>ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Solanum
           tuberosum] gi|565360441|ref|XP_006346976.1| PREDICTED:
           RNA pseudouridine synthase 5-like isoform X2 [Solanum
           tuberosum]
          Length = 379

 Score =  159 bits (403), Expect = 5e-37
 Identities = 79/141 (56%), Positives = 100/141 (70%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G I+Y GVA GLYVA+P+GK A S V VL RD + NCTLV+VEI SGR HQIRIH+++IG
Sbjct: 237 GTIKYPGVAKGLYVASPSGKPALSSVRVLERDSENNCTLVQVEIQSGRPHQIRIHLSFIG 296

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           +PL+GDPLYVSGG+P                  F +DGGY+R    +PGDCGY+LHA+Q+
Sbjct: 297 YPLIGDPLYVSGGQP-------KCFHPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQI 349

Query: 363 ILQHPISNKVMKIVAPPPTTL 425
            L HPI+N+++KI AP P  L
Sbjct: 350 GLIHPITNELIKITAPLPAIL 370


>ref|XP_006403820.1| hypothetical protein EUTSA_v10010446mg [Eutrema salsugineum]
           gi|557104939|gb|ESQ45273.1| hypothetical protein
           EUTSA_v10010446mg [Eutrema salsugineum]
          Length = 382

 Score =  159 bits (403), Expect = 5e-37
 Identities = 83/142 (58%), Positives = 101/142 (71%), Gaps = 1/142 (0%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G ++Y GVA GLYVA+  GK A S+V VL R+ +RNCTLV+VEI SGR HQIRIH+AY+G
Sbjct: 231 GVVRYPGVAKGLYVASSEGKPALSKVAVLERNMQRNCTLVKVEIQSGRPHQIRIHLAYMG 290

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           HPLVGDPLYV+GGKP                  FAEDGGY R   ++PGDCGYHLHA+QV
Sbjct: 291 HPLVGDPLYVAGGKP-------KCFDPDAVDSAFAEDGGYRRPNQAVPGDCGYHLHAHQV 343

Query: 363 ILQHPIS-NKVMKIVAPPPTTL 425
            L + ++ NKV+K+VAP P  L
Sbjct: 344 ELPNLLNLNKVVKVVAPLPPIL 365


>ref|NP_974416.1| RNA pseudourine synthase 5 [Arabidopsis thaliana]
           gi|229891781|sp|Q5M721.2|PUS5_ARATH RecName: Full=RNA
           pseudouridine synthase 5; AltName: Full=RNA
           pseudouridylate synthase 5; AltName: Full=RNA-uridine
           isomerase 5 gi|332645400|gb|AEE78921.1| RNA pseudourine
           synthase 5 [Arabidopsis thaliana]
          Length = 369

 Score =  159 bits (403), Expect = 5e-37
 Identities = 82/142 (57%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G ++Y GVA GLYVA+P GK A S+V VL RD+++NC+LV+VEI SGR HQIRIH+AY+G
Sbjct: 227 GVVRYPGVAQGLYVASPEGKPAFSKVFVLERDREKNCSLVKVEIQSGRPHQIRIHLAYMG 286

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           HPLVGDPLYV+GG+P                  FAEDGGY R   ++PGDCGYHLHA+QV
Sbjct: 287 HPLVGDPLYVAGGQP-----KCFDPDLVDDAAAFAEDGGYRRPNQAVPGDCGYHLHAHQV 341

Query: 363 ILQHPI-SNKVMKIVAPPPTTL 425
            L + + ++KV+KIVAP P  L
Sbjct: 342 ELPNLLNTHKVVKIVAPLPPIL 363


>emb|CAC07917.1| putative protein [Arabidopsis thaliana]
          Length = 376

 Score =  159 bits (403), Expect = 5e-37
 Identities = 82/142 (57%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G ++Y GVA GLYVA+P GK A S+V VL RD+++NC+LV+VEI SGR HQIRIH+AY+G
Sbjct: 234 GVVRYPGVAQGLYVASPEGKPAFSKVFVLERDREKNCSLVKVEIQSGRPHQIRIHLAYMG 293

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           HPLVGDPLYV+GG+P                  FAEDGGY R   ++PGDCGYHLHA+QV
Sbjct: 294 HPLVGDPLYVAGGQP-----KCFDPDLVDDAAAFAEDGGYRRPNQAVPGDCGYHLHAHQV 348

Query: 363 ILQHPI-SNKVMKIVAPPPTTL 425
            L + + ++KV+KIVAP P  L
Sbjct: 349 ELPNLLNTHKVVKIVAPLPPIL 370


>ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [Solanum lycopersicum]
          Length = 402

 Score =  159 bits (402), Expect = 6e-37
 Identities = 79/141 (56%), Positives = 100/141 (70%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G I+Y GVA GLYVA+P+GK A S V VL RD + NCTLV+VEI SGR HQIRIH+++IG
Sbjct: 255 GTIKYPGVAKGLYVASPSGKPALSSVRVLERDSESNCTLVQVEIQSGRPHQIRIHLSFIG 314

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           +PL+GDPLYVSGG+P                  F +DGGY+R    +PGDCGY+LHA+Q+
Sbjct: 315 YPLIGDPLYVSGGQP-------KCFHPELLDESFEKDGGYQRPENPVPGDCGYNLHAHQI 367

Query: 363 ILQHPISNKVMKIVAPPPTTL 425
            L HPI+N+++KI AP P  L
Sbjct: 368 GLIHPITNELIKITAPLPAIL 388


>ref|XP_004307403.1| PREDICTED: RNA pseudourine synthase 5-like [Fragaria vesca subsp.
           vesca]
          Length = 375

 Score =  158 bits (399), Expect = 1e-36
 Identities = 77/141 (54%), Positives = 101/141 (71%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G ++Y GVA GLY+A+P GK A S+V VL RD ++N T+V+VEI SGR HQIRIH+++IG
Sbjct: 231 GTVRYPGVAKGLYIASPAGKPALSKVEVLDRDIQKNHTIVQVEIQSGRPHQIRIHLSFIG 290

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           HPL+GDPLYV+GG+P                  FA+DGG++R    +PGDCGY+LHA+QV
Sbjct: 291 HPLLGDPLYVAGGQP-------KCLGSDLVDESFADDGGFKRPTKPVPGDCGYNLHAHQV 343

Query: 363 ILQHPISNKVMKIVAPPPTTL 425
           +L HP SN+V+KI AP P  L
Sbjct: 344 VLSHPSSNEVIKITAPLPLVL 364


>gb|EXB80105.1| RNA pseudourine synthase 5 [Morus notabilis]
          Length = 377

 Score =  157 bits (397), Expect = 2e-36
 Identities = 78/141 (55%), Positives = 98/141 (69%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G +QY GVA GLYVA+P+GK A S+V VL RD ++NCTLV+VEI SGR HQIRIH+++IG
Sbjct: 232 GTVQYPGVAKGLYVASPSGKPALSKVEVLERDVEKNCTLVKVEIQSGRPHQIRIHLSFIG 291

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           HPL+GDPLYV GG+P                  FA+DGG+ R    +PGDCGY LHA+ V
Sbjct: 292 HPLLGDPLYVVGGRP-------RCFDPEFVDGSFAQDGGFPRPAKPVPGDCGYTLHAHHV 344

Query: 363 ILQHPISNKVMKIVAPPPTTL 425
            L HP +N+V++I AP P  L
Sbjct: 345 SLSHPTTNEVIEITAPLPPVL 365


>ref|XP_006291291.1| hypothetical protein CARUB_v10017427mg [Capsella rubella]
           gi|482559998|gb|EOA24189.1| hypothetical protein
           CARUB_v10017427mg [Capsella rubella]
          Length = 382

 Score =  157 bits (396), Expect = 3e-36
 Identities = 81/142 (57%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G ++Y GVA GLYVA+P GK A S+VVVL RD++++CTLV+VEI SGR HQIRIH+AYIG
Sbjct: 229 GVVRYPGVAKGLYVASPEGKPAFSKVVVLERDREKSCTLVKVEIQSGRPHQIRIHLAYIG 288

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           HPL+GDPLYV+GG+P                  FAEDGGY R    +PGDCGY+LHA+QV
Sbjct: 289 HPLIGDPLYVAGGQP-----KCFDTDLVADDAAFAEDGGYRRPNQPVPGDCGYYLHAHQV 343

Query: 363 ILQHPI-SNKVMKIVAPPPTTL 425
            L + + +++V+KIVAP P  L
Sbjct: 344 DLLNLLNTHQVVKIVAPLPPIL 365


>ref|XP_004496322.1| PREDICTED: RNA pseudourine synthase 5-like [Cicer arietinum]
          Length = 368

 Score =  154 bits (390), Expect = 2e-35
 Identities = 74/141 (52%), Positives = 100/141 (70%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G ++Y GVA GLYVA+ +GK A S V +L R+ K N TLV+V+I SGR HQIRIH+++IG
Sbjct: 222 GMVKYPGVAKGLYVASQSGKPALSVVDILERNVKENSTLVQVKIQSGRPHQIRIHLSFIG 281

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           HPL+GDPLY  GG+P                  FAEDGGY R P  +PGDCGY+LHA+++
Sbjct: 282 HPLIGDPLYAVGGQP-------KCLDYDFLDDSFAEDGGYPRPPKPVPGDCGYYLHAHEL 334

Query: 363 ILQHPISNKVMKIVAPPPTTL 425
           +L HPI+N++++I+AP P+ L
Sbjct: 335 LLTHPITNEIIEIIAPLPSIL 355


>ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Populus trichocarpa]
           gi|222851845|gb|EEE89392.1| hypothetical protein
           POPTR_0008s04160g [Populus trichocarpa]
          Length = 377

 Score =  154 bits (388), Expect = 3e-35
 Identities = 79/142 (55%), Positives = 100/142 (70%), Gaps = 1/142 (0%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G ++Y GVA GLYVA+P+GK A S+V VL RD + N TLV+VEI SGR HQIRIH+++IG
Sbjct: 233 GTMRYPGVAKGLYVASPSGKPALSKVEVLERDSQLNQTLVQVEIESGRPHQIRIHLSFIG 292

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           HPL+GDPLY  GG+P+                 FAEDGGYER    +PGDCGY+LHA+Q+
Sbjct: 293 HPLLGDPLYDVGGQPM-------CFDSEHEDESFAEDGGYERPAKPVPGDCGYYLHAHQL 345

Query: 363 ILQHPISN-KVMKIVAPPPTTL 425
           +L HP  N +V+KI AP P+ L
Sbjct: 346 VLSHPTKNEQVIKITAPLPSIL 367


>ref|XP_002877851.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297323689|gb|EFH54110.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 387

 Score =  152 bits (385), Expect = 6e-35
 Identities = 82/148 (55%), Positives = 102/148 (68%), Gaps = 7/148 (4%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G ++Y GVA GLYVA+P GK A S+V VL RDK++NCTLV+VEI SGR HQIRIH+AY+G
Sbjct: 230 GVVRYPGVAKGLYVASPEGKPAFSKVAVLERDKQKNCTLVKVEIQSGRPHQIRIHLAYMG 289

Query: 183 HPLVG------DPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYH 344
           HPL+       DPLYV+GG+P                  FAEDGGY R   ++PGDCGYH
Sbjct: 290 HPLLASYNCMRDPLYVAGGQP-----KCFDPDLVDDDAAFAEDGGYRRPNQAVPGDCGYH 344

Query: 345 LHAYQVILQHPI-SNKVMKIVAPPPTTL 425
           LHA+QV L + + ++KV+KIVAP P  L
Sbjct: 345 LHAHQVELPNLLNTHKVVKIVAPLPPIL 372


>gb|EOY18594.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 378

 Score =  151 bits (382), Expect = 1e-34
 Identities = 71/141 (50%), Positives = 102/141 (72%)
 Frame = +3

Query: 3   GKIQYHGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIG 182
           G +QY GVA GLYVA+P+GK A S+V VL +D+++N TLV+V+I SGR HQIRIH+++IG
Sbjct: 230 GIVQYPGVAKGLYVASPSGKPALSKVEVLEKDEQQNHTLVQVQIESGRPHQIRIHLSFIG 289

Query: 183 HPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYHLHAYQV 362
           HPL+GDPLY++GG+P                  +A+DGGY+R    +PGDCGY+LHA+++
Sbjct: 290 HPLLGDPLYIAGGQP-------RCFDSEFVDENYAQDGGYQRPVNPVPGDCGYYLHAHRL 342

Query: 363 ILQHPISNKVMKIVAPPPTTL 425
           +L HP +++++ I AP P  L
Sbjct: 343 LLSHPTTDEIINITAPLPPVL 363