BLASTX nr result
ID: Ephedra28_contig00016742
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00016742
(925 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002439962.1| hypothetical protein SORBIDRAFT_09g023450 [S... 83 1e-13
ref|XP_004961743.1| PREDICTED: RING-H2 finger protein ATL74-like... 82 4e-13
gb|ACG25761.1| RING-H2 finger protein ATL5A [Zea mays] gi|413945... 81 5e-13
gb|EMT00106.1| RING-H2 finger protein ATL3C [Aegilops tauschii] 78 4e-12
gb|EMT03646.1| RING-H2 finger protein ATL5B [Aegilops tauschii] 77 1e-11
ref|XP_006661334.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 76 2e-11
dbj|BAD19749.1| zinc finger (C3HC4-type RING finger) family prot... 76 2e-11
gb|EEC84728.1| hypothetical protein OsI_31710 [Oryza sativa Indi... 76 2e-11
gb|EAY98429.1| hypothetical protein OsI_20344 [Oryza sativa Indi... 76 2e-11
ref|NP_001055845.1| Os05g0478000 [Oryza sativa Japonica Group] g... 76 2e-11
ref|XP_002533419.1| ring finger protein, putative [Ricinus commu... 75 3e-11
ref|XP_006298646.1| hypothetical protein CARUB_v10014735mg [Caps... 75 5e-11
ref|XP_002437418.1| hypothetical protein SORBIDRAFT_10g026650 [S... 74 6e-11
ref|XP_004142732.1| PREDICTED: RING-H2 finger protein ATL72-like... 74 8e-11
ref|XP_003564500.1| PREDICTED: RING-H2 finger protein ATL72-like... 74 8e-11
ref|NP_001148026.1| RING-H2 finger protein ATL2K [Zea mays] gi|1... 74 8e-11
ref|XP_004969995.1| PREDICTED: E3 ubiquitin-protein ligase ATL41... 74 1e-10
ref|XP_003566136.1| PREDICTED: RING-H2 finger protein ATL72-like... 74 1e-10
ref|NP_179337.1| RING-H2 finger protein ATL44 [Arabidopsis thali... 73 1e-10
ref|XP_006409305.1| hypothetical protein EUTSA_v10023141mg [Eutr... 73 2e-10
>ref|XP_002439962.1| hypothetical protein SORBIDRAFT_09g023450 [Sorghum bicolor]
gi|241945247|gb|EES18392.1| hypothetical protein
SORBIDRAFT_09g023450 [Sorghum bicolor]
Length = 208
Score = 83.2 bits (204), Expect = 1e-13
Identities = 32/53 (60%), Positives = 39/53 (73%)
Frame = -3
Query: 596 GNAEENGECAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVSNPSCPTCRRP 438
G EE CAICLGEF DGEK+ ++ CGH FH+PC+ W++S SCPTCRRP
Sbjct: 123 GEEEEEDVCAICLGEFADGEKVRVLPRCGHGFHVPCVDAWLLSRGSCPTCRRP 175
>ref|XP_004961743.1| PREDICTED: RING-H2 finger protein ATL74-like [Setaria italica]
Length = 205
Score = 81.6 bits (200), Expect = 4e-13
Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
Frame = -3
Query: 596 GNAEENGE--CAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVSNPSCPTCRRP 438
G AEE E CAICLGEF DGEK+ ++ CGH FH+PC+ W++S SCPTCRRP
Sbjct: 119 GAAEEEEEDVCAICLGEFADGEKVRVLPRCGHGFHVPCVDAWLLSRGSCPTCRRP 173
>gb|ACG25761.1| RING-H2 finger protein ATL5A [Zea mays] gi|413945738|gb|AFW78387.1|
putative RING zinc finger domain superfamily protein
[Zea mays]
Length = 206
Score = 81.3 bits (199), Expect = 5e-13
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 9/77 (11%)
Frame = -3
Query: 641 VRVQQMAAIDTAVYEGNAEENGE---------CAICLGEFRDGEKICIVSMCGHMFHIPC 489
++ + + +I VY G ++ E CAICLGEF DGEK+ ++ CGH FH+PC
Sbjct: 95 IKKRALRSIPVEVYVGGDAKDDEEEGAGSGDVCAICLGEFADGEKVRVLPRCGHAFHVPC 154
Query: 488 ISPWIVSNPSCPTCRRP 438
+ W++S SCPTCRRP
Sbjct: 155 VDAWLLSRGSCPTCRRP 171
>gb|EMT00106.1| RING-H2 finger protein ATL3C [Aegilops tauschii]
Length = 106
Score = 78.2 bits (191), Expect = 4e-12
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = -3
Query: 641 VRVQQMAAIDTAVYEGNAEENGECAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVSNP 462
++ + + ++ VY + CAICLGEF DGEK+ ++ CGH FH+ C+ W+VS+
Sbjct: 8 IKRRVLRSLPVEVYGSGEVIDDVCAICLGEFVDGEKVRVLPQCGHGFHVRCVDAWLVSHS 67
Query: 461 SCPTCRRP 438
SCPTCRRP
Sbjct: 68 SCPTCRRP 75
>gb|EMT03646.1| RING-H2 finger protein ATL5B [Aegilops tauschii]
Length = 167
Score = 76.6 bits (187), Expect = 1e-11
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Frame = -3
Query: 632 QQMAAIDTAVYEG---NAEENGECAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVSNP 462
+ + A+ A Y G +A CAICL +F+DGE I ++ +CGH FH+PC+ W+ S
Sbjct: 78 EALVALPVATYAGEKQHASAGAGCAICLSDFKDGETIRVLPVCGHRFHVPCVDRWLTSRC 137
Query: 461 SCPTCRR 441
SCPTCRR
Sbjct: 138 SCPTCRR 144
>ref|XP_006661334.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like, partial [Oryza
brachyantha]
Length = 260
Score = 76.3 bits (186), Expect = 2e-11
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = -3
Query: 626 MAAIDTAVYEGNAEENGECAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVSNPSCPTC 447
+ +I TA Y G+CA+CLGEFRDGE + ++ C H FH PCI W+ ++ +CP C
Sbjct: 43 ITSIATAEYRAGVGWGGDCAVCLGEFRDGELVRLLPRCAHPFHAPCIDTWLRAHVNCPLC 102
Query: 446 RRPCFCPA 423
R P P+
Sbjct: 103 RSPVVVPS 110
>dbj|BAD19749.1| zinc finger (C3HC4-type RING finger) family protein-like [Oryza
sativa Japonica Group] gi|47848401|dbj|BAD22259.1| zinc
finger (C3HC4-type RING finger) family protein-like
[Oryza sativa Japonica Group]
gi|222641748|gb|EEE69880.1| hypothetical protein
OsJ_29697 [Oryza sativa Japonica Group]
Length = 357
Score = 76.3 bits (186), Expect = 2e-11
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = -3
Query: 626 MAAIDTAVYEGNAEENGECAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVSNPSCPTC 447
+ +I TA Y G+CA+CLGEFRDGE + ++ C H FH PCI W+ ++ +CP C
Sbjct: 139 ITSIATAEYRAGVGWGGDCAVCLGEFRDGELVRLLPRCSHPFHAPCIDTWLRAHVNCPLC 198
Query: 446 RRPCFCPA 423
R P P+
Sbjct: 199 RSPVVVPS 206
>gb|EEC84728.1| hypothetical protein OsI_31710 [Oryza sativa Indica Group]
Length = 357
Score = 76.3 bits (186), Expect = 2e-11
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = -3
Query: 626 MAAIDTAVYEGNAEENGECAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVSNPSCPTC 447
+ +I TA Y G+CA+CLGEFRDGE + ++ C H FH PCI W+ ++ +CP C
Sbjct: 139 ITSIATAEYRAGVGWGGDCAVCLGEFRDGELVRLLPRCSHPFHAPCIDTWLRAHVNCPLC 198
Query: 446 RRPCFCPA 423
R P P+
Sbjct: 199 RSPVVVPS 206
>gb|EAY98429.1| hypothetical protein OsI_20344 [Oryza sativa Indica Group]
Length = 189
Score = 75.9 bits (185), Expect = 2e-11
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Frame = -3
Query: 641 VRVQQMAAIDTAVYEGNAE--ENGECAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVS 468
++ + + +I VY G E E CAICLGEF DGEK+ ++ C H FH+ C+ W+VS
Sbjct: 99 IKKRALRSIPVEVYCGGEETAETDVCAICLGEFADGEKVRVLPRCRHGFHVRCVDAWLVS 158
Query: 467 NPSCPTCRR 441
+ SCPTCRR
Sbjct: 159 HGSCPTCRR 167
>ref|NP_001055845.1| Os05g0478000 [Oryza sativa Japonica Group]
gi|46576004|gb|AAT01365.1| unknown protein [Oryza sativa
Japonica Group] gi|113579396|dbj|BAF17759.1|
Os05g0478000 [Oryza sativa Japonica Group]
gi|215766898|dbj|BAG99126.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222631965|gb|EEE64097.1| hypothetical protein
OsJ_18928 [Oryza sativa Japonica Group]
Length = 189
Score = 75.9 bits (185), Expect = 2e-11
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Frame = -3
Query: 641 VRVQQMAAIDTAVYEGNAE--ENGECAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVS 468
++ + + +I VY G E E CAICLGEF DGEK+ ++ C H FH+ C+ W+VS
Sbjct: 99 IKKRALRSIPVEVYCGGEETAETDVCAICLGEFADGEKVRVLPRCRHGFHVRCVDAWLVS 158
Query: 467 NPSCPTCRR 441
+ SCPTCRR
Sbjct: 159 HGSCPTCRR 167
>ref|XP_002533419.1| ring finger protein, putative [Ricinus communis]
gi|223526732|gb|EEF28962.1| ring finger protein,
putative [Ricinus communis]
Length = 178
Score = 75.1 bits (183), Expect = 3e-11
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Frame = -3
Query: 641 VRVQQMAAIDTAVY----------EGNAEENGECAICLGEFRDGEKICIVSMCGHMFHIP 492
++ ++M A+ T+ Y ++ CAICL +F DGEKI ++ C H FH+
Sbjct: 84 LKKKEMVALPTSTYVNSTSSPSASASSSASASSCAICLADFSDGEKIRVLPQCNHRFHVG 143
Query: 491 CISPWIVSNPSCPTCRRPCFC 429
CI W++S+PSCPTCRR C
Sbjct: 144 CIDKWLLSHPSCPTCRRRLKC 164
>ref|XP_006298646.1| hypothetical protein CARUB_v10014735mg [Capsella rubella]
gi|482567355|gb|EOA31544.1| hypothetical protein
CARUB_v10014735mg [Capsella rubella]
Length = 187
Score = 74.7 bits (182), Expect = 5e-11
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Frame = -3
Query: 596 GNAEENG---ECAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVSNPSCPTCRR 441
G AE+ G ECAICL EF +GE+I ++ +CGH FH+ CI W+VS SCP+CRR
Sbjct: 93 GGAEDGGDTTECAICLTEFAEGEEIRVLPLCGHSFHVACIDKWLVSRSSCPSCRR 147
>ref|XP_002437418.1| hypothetical protein SORBIDRAFT_10g026650 [Sorghum bicolor]
gi|241915641|gb|EER88785.1| hypothetical protein
SORBIDRAFT_10g026650 [Sorghum bicolor]
Length = 162
Score = 74.3 bits (181), Expect = 6e-11
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = -3
Query: 632 QQMAAIDTAVYEGNAEENGECAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVSNPSCP 453
+++ A+ A Y + G CAICL +F DGE+I ++ +CGH FH+ CI W+VS+ SCP
Sbjct: 80 EEVVALPVATYVASPAPAG-CAICLSDFADGERIRVLPVCGHRFHVVCIDRWLVSHCSCP 138
Query: 452 TCRR 441
TCRR
Sbjct: 139 TCRR 142
>ref|XP_004142732.1| PREDICTED: RING-H2 finger protein ATL72-like [Cucumis sativus]
gi|449521023|ref|XP_004167531.1| PREDICTED: RING-H2
finger protein ATL72-like [Cucumis sativus]
Length = 180
Score = 73.9 bits (180), Expect = 8e-11
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Frame = -3
Query: 641 VRVQQMAAIDTAVYEGNAE---ENGECAICLGEFRDGEKICIVSMCGHMFHIPCISPWIV 471
V Q++ I AVYEG ECAICLGEF GE + I+ C H FH+ CI W+V
Sbjct: 74 VERQELEEIPVAVYEGEGRMKIRGTECAICLGEFESGEGLRIMPKCNHGFHVHCIDAWLV 133
Query: 470 SNPSCPTCR 444
S+ SCP CR
Sbjct: 134 SHSSCPNCR 142
>ref|XP_003564500.1| PREDICTED: RING-H2 finger protein ATL72-like [Brachypodium
distachyon]
Length = 221
Score = 73.9 bits (180), Expect = 8e-11
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = -3
Query: 596 GNAEENGECAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVSNPSCPTCR 444
G+A + CAICLGEF DG+K+ ++ CGH FH+ C+ W+VS+ SCPTCR
Sbjct: 132 GSAGASDVCAICLGEFADGDKVRVLPRCGHEFHVRCVDAWLVSHDSCPTCR 182
>ref|NP_001148026.1| RING-H2 finger protein ATL2K [Zea mays] gi|195615316|gb|ACG29488.1|
RING-H2 finger protein ATL2K [Zea mays]
gi|414880463|tpg|DAA57594.1| TPA: putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 241
Score = 73.9 bits (180), Expect = 8e-11
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Frame = -3
Query: 626 MAAIDTAVYEGNAEENG----ECAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVSNPS 459
+AA+ T +Y +A E G EC ICLG +DGE + + CGH+FH+PC+ W+ S+ S
Sbjct: 95 IAALPTTLYRNDAAEAGAGSDECTICLGAVQDGEVVRALPACGHVFHVPCVDTWLASSSS 154
Query: 458 CPTCR 444
CP CR
Sbjct: 155 CPVCR 159
>ref|XP_004969995.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Setaria italica]
Length = 238
Score = 73.6 bits (179), Expect = 1e-10
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 4/65 (6%)
Frame = -3
Query: 626 MAAIDTAVYEGNAE-ENG---ECAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVSNPS 459
+AA+ TAVY G A E G ECAICLG ++GE + + CGH+FH+PC+ W+ S+ S
Sbjct: 92 IAALPTAVYGGEAGGEPGACTECAICLGNVQEGEVVRALPACGHVFHVPCVDTWLASSSS 151
Query: 458 CPTCR 444
CP CR
Sbjct: 152 CPVCR 156
>ref|XP_003566136.1| PREDICTED: RING-H2 finger protein ATL72-like [Brachypodium
distachyon]
Length = 211
Score = 73.6 bits (179), Expect = 1e-10
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = -3
Query: 572 CAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVSNPSCPTCRRP 438
CAICL EF DGEK+ ++ CGH +H+PC+ W+VS+ SCPTCR P
Sbjct: 136 CAICLAEFVDGEKVRVLPRCGHGYHVPCVDAWLVSHGSCPTCRSP 180
>ref|NP_179337.1| RING-H2 finger protein ATL44 [Arabidopsis thaliana]
gi|51316192|sp|O22755.1|ATL44_ARATH RecName:
Full=RING-H2 finger protein ATL44; AltName: Full=RING-H2
zinc finger protein RHA3a
gi|13877953|gb|AAK44054.1|AF370239_1 putative RING zinc
finger protein [Arabidopsis thaliana]
gi|3790573|gb|AAC68673.1| RING-H2 finger protein RHA3a
[Arabidopsis thaliana] gi|4914367|gb|AAD32903.1|
putative RING zinc finger protein [Arabidopsis thaliana]
gi|17065626|gb|AAL33807.1| putative RING zinc finger
protein [Arabidopsis thaliana]
gi|330251537|gb|AEC06631.1| RING-H2 finger protein ATL44
[Arabidopsis thaliana]
Length = 185
Score = 73.2 bits (178), Expect = 1e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = -3
Query: 596 GNAEENG---ECAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVSNPSCPTCRR 441
G A E G ECAICL +F DGE+I ++ +CGH FH+ CI W+VS SCP+CRR
Sbjct: 91 GAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRR 145
>ref|XP_006409305.1| hypothetical protein EUTSA_v10023141mg [Eutrema salsugineum]
gi|557110467|gb|ESQ50758.1| hypothetical protein
EUTSA_v10023141mg [Eutrema salsugineum]
Length = 185
Score = 72.8 bits (177), Expect = 2e-10
Identities = 27/48 (56%), Positives = 37/48 (77%)
Frame = -3
Query: 584 ENGECAICLGEFRDGEKICIVSMCGHMFHIPCISPWIVSNPSCPTCRR 441
++ ECAICL +F DGE+I ++ +CGH FH+ CI W+VS SCP+CRR
Sbjct: 100 DSSECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRR 147