BLASTX nr result
ID: Ephedra28_contig00016625
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00016625
(1780 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002884075.1| pentatricopeptide repeat-containing protein ... 217 1e-53
gb|AAM62704.1| unknown [Arabidopsis thaliana] 217 1e-53
ref|NP_565422.1| pentatricopeptide repeat-containing protein [Ar... 213 2e-52
ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutr... 209 3e-51
ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containi... 208 5e-51
ref|XP_004163411.1| PREDICTED: pentatricopeptide repeat-containi... 208 7e-51
ref|XP_006857185.1| hypothetical protein AMTR_s00065p00182300 [A... 203 2e-49
emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera] 200 1e-48
gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily p... 196 4e-47
ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containi... 194 1e-46
ref|XP_002521681.1| pentatricopeptide repeat-containing protein,... 193 2e-46
ref|XP_003626687.1| Pentatricopeptide repeat-containing protein ... 190 1e-45
ref|XP_004232547.1| PREDICTED: pentatricopeptide repeat-containi... 188 6e-45
ref|XP_002306437.1| pentatricopeptide repeat-containing family p... 187 1e-44
ref|XP_006340813.1| PREDICTED: pentatricopeptide repeat-containi... 187 2e-44
ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containi... 186 2e-44
gb|EXC35267.1| hypothetical protein L484_026589 [Morus notabilis] 185 5e-44
ref|XP_006425315.1| hypothetical protein CICLE_v10025555mg [Citr... 184 1e-43
ref|XP_003595941.1| Pentatricopeptide repeat-containing protein ... 182 5e-43
gb|ESW06544.1| hypothetical protein PHAVU_010G056500g [Phaseolus... 181 1e-42
>ref|XP_002884075.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329915|gb|EFH60334.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 462
Score = 217 bits (553), Expect = 1e-53
Identities = 128/377 (33%), Positives = 210/377 (55%), Gaps = 5/377 (1%)
Frame = -1
Query: 1570 PGGARSPRELDIIERLERAATIEDAKKLY-SMLTPFRIP-SFSTHNAVLRNFARSGRVDD 1397
P ++PRE + ++ + DAK L+ S+ RIP HN+VL+++A VDD
Sbjct: 44 PENTQAPREPSLRNPF-KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYASIAAVDD 102
Query: 1396 CVNML-YFMRGKGEFTANTVTFNVIMTELGKIDD--ITGIEKLLKVMKRNECEADQVTMD 1226
V + + ++ + F TF ++++ + D I+ + ++L +M N E DQVT D
Sbjct: 103 TVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTD 162
Query: 1225 VLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKHLVRTGRFDMACELFDKMIAS 1046
+ VR+LC G+V++A ++ E+ + P +T NFL KHL + + E D+M
Sbjct: 163 IAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM--R 220
Query: 1045 GSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKAGCQPDRMVYATLMNGFAKI 866
KPD+ +++IL++ +C ++ +L++AM L+ + AG +PD +Y T+M GF +
Sbjct: 221 DDFDVKPDLVSFTILIDNVCNSK---NLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTL 277
Query: 865 NHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGDVDLALDLLKAMSYEWHRPDTFSY 686
+ EA+ VYK MK+ G +PD++ YNTLI S +G V+ A LK M + PDT +Y
Sbjct: 278 SKGSEAIGVYKKMKEEGVEPDQITYNTLIYGLSKSGRVEEARMYLKTMVDAGYEPDTATY 337
Query: 685 APLLGALCRKERALESLSLLKRMIKNGITGNEKSYNQVLACLARNNEIDDAMELFELMKD 506
L+ +CRK +L +LSLL+ M G N+ +YN +L L + +D MEL+ELMK
Sbjct: 338 TSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYELMKS 397
Query: 505 ENIGISLTGYNAFVRAL 455
+ + GY VR+L
Sbjct: 398 SGVKLETNGYATLVRSL 414
Score = 68.9 bits (167), Expect = 7e-09
Identities = 56/196 (28%), Positives = 81/196 (41%)
Frame = -1
Query: 1369 GKGEFTANTVTFNVIMTELGKIDDITGIEKLLKVMKRNECEADQVTMDVLVRTLCNVGQV 1190
G F + +N IM + + + K MK E DQ+T + L+ L G+V
Sbjct: 256 GNAGFKPDCFLYNTIMKGFCTLSKGSEAIGVYKKMKEEGVEPDQITYNTLIYGLSKSGRV 315
Query: 1189 EKACEVFTEMPTGKNTPKCFTLNFLTKHLVRTGRFDMACELFDKMIASGSRGFKPDVANY 1010
E+A M P T L + R G A L ++M A RG P+ Y
Sbjct: 316 EEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEA---RGCAPNDCTY 372
Query: 1009 SILMEGLCKTRKYEHLKKAMQLLHDMKKAGCQPDRMVYATLMNGFAKINHTEEALAVYKL 830
+ L+ GLCK R + K M+L MK +G + + YATL+ K EA V+
Sbjct: 373 NTLLHGLCKARLMD---KGMELYELMKSSGVKLETNGYATLVRSLVKSGKVAEAYEVFDY 429
Query: 829 MKKAGWKPDKVLYNTL 782
+ D Y+TL
Sbjct: 430 AVDSKSLTDASAYSTL 445
>gb|AAM62704.1| unknown [Arabidopsis thaliana]
Length = 463
Score = 217 bits (552), Expect = 1e-53
Identities = 129/377 (34%), Positives = 209/377 (55%), Gaps = 5/377 (1%)
Frame = -1
Query: 1570 PGGARSPRELDIIERLERAATIEDAKKLY-SMLTPFRIP-SFSTHNAVLRNFARSGRVDD 1397
P ++PRE + ++ + DAK L+ S+ RIP HN+VL+++A VDD
Sbjct: 45 PHNTQAPREPSLRNPF-KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYASIAVVDD 103
Query: 1396 CVNML-YFMRGKGEFTANTVTFNVIMTELGKIDD--ITGIEKLLKVMKRNECEADQVTMD 1226
V + M+ + F TF ++++ + D I+ + ++L +M N E DQVT D
Sbjct: 104 TVKFFQHIMKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTD 163
Query: 1225 VLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKHLVRTGRFDMACELFDKMIAS 1046
+ VR+LC G+V++A ++ E+ + P +T NFL KHL + + E D+M
Sbjct: 164 IAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM--R 221
Query: 1045 GSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKAGCQPDRMVYATLMNGFAKI 866
KPD+ +++IL++ +C ++ +L++AM L+ + AG +PD +Y T+M GF +
Sbjct: 222 DDFDVKPDLVSFTILIDNVCNSK---NLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTL 278
Query: 865 NHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGDVDLALDLLKAMSYEWHRPDTFSY 686
+ EA+ VYK MK+ G +PD++ YNTLI S AG V+ A LK M + PDT +Y
Sbjct: 279 SKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATY 338
Query: 685 APLLGALCRKERALESLSLLKRMIKNGITGNEKSYNQVLACLARNNEIDDAMELFELMKD 506
L+ +CRK +L +LSLL+ M G N+ +YN +L L + +D MEL+E+MK
Sbjct: 339 TSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKS 398
Query: 505 ENIGISLTGYNAFVRAL 455
+ + GY VR+L
Sbjct: 399 SGVKLESNGYATLVRSL 415
>ref|NP_565422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146596|sp|Q84J71.1|PP161_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g17670 gi|28393395|gb|AAO42121.1| unknown protein
[Arabidopsis thaliana] gi|28973597|gb|AAO64123.1| unknown
protein [Arabidopsis thaliana]
gi|330251570|gb|AEC06664.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 463
Score = 213 bits (542), Expect = 2e-52
Identities = 126/377 (33%), Positives = 209/377 (55%), Gaps = 5/377 (1%)
Frame = -1
Query: 1570 PGGARSPRELDIIERLERAATIEDAKKLY-SMLTPFRIP-SFSTHNAVLRNFARSGRVDD 1397
P ++PRE + ++ + DAK L+ S+ RIP HN+VL+++ V+D
Sbjct: 45 PQNTQAPREPSLRNPF-KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVND 103
Query: 1396 CVNML-YFMRGKGEFTANTVTFNVIMTELGKIDD--ITGIEKLLKVMKRNECEADQVTMD 1226
V + + ++ + F TF ++++ + D I+ + ++L +M N E DQVT D
Sbjct: 104 TVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTD 163
Query: 1225 VLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKHLVRTGRFDMACELFDKMIAS 1046
+ VR+LC G+V++A ++ E+ + P +T NFL KHL + + E D+M
Sbjct: 164 IAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM--R 221
Query: 1045 GSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKAGCQPDRMVYATLMNGFAKI 866
KPD+ +++IL++ +C ++ +L++AM L+ + AG +PD +Y T+M GF +
Sbjct: 222 DDFDVKPDLVSFTILIDNVCNSK---NLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTL 278
Query: 865 NHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGDVDLALDLLKAMSYEWHRPDTFSY 686
+ EA+ VYK MK+ G +PD++ YNTLI S AG V+ A LK M + PDT +Y
Sbjct: 279 SKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATY 338
Query: 685 APLLGALCRKERALESLSLLKRMIKNGITGNEKSYNQVLACLARNNEIDDAMELFELMKD 506
L+ +CRK +L +LSLL+ M G N+ +YN +L L + +D MEL+E+MK
Sbjct: 339 TSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKS 398
Query: 505 ENIGISLTGYNAFVRAL 455
+ + GY VR+L
Sbjct: 399 SGVKLESNGYATLVRSL 415
>ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutrema salsugineum]
gi|557110430|gb|ESQ50721.1| hypothetical protein
EUTSA_v10022683mg [Eutrema salsugineum]
Length = 462
Score = 209 bits (532), Expect = 3e-51
Identities = 131/422 (31%), Positives = 224/422 (53%), Gaps = 14/422 (3%)
Frame = -1
Query: 1678 PAKFPTMLATHGRSALRPCRCTPSP---------RFLAHYMNHPKPGGARSPRELDIIER 1526
P+ F +M +TH +P C +P R + ++H +R P +
Sbjct: 5 PSSFRSMTSTH--LVKKPTSCPLAPPRDPRNRIARRESVKISHHTDQVSREP-----LRN 57
Query: 1525 LERAATIEDAKKLY-SMLTPFRIP-SFSTHNAVLRNFARSGRVDDCVNM-LYFMRGKGEF 1355
+ + DAK L+ S+ RIP HN+VL+++A VDD V + L+ ++ + F
Sbjct: 58 PFKTPDLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYASIAAVDDTVKLFLHILKSQPGF 117
Query: 1354 TANTVTFNVIMTELGKIDD--ITGIEKLLKVMKRNECEADQVTMDVLVRTLCNVGQVEKA 1181
+ TF+++++ + D ++ + +L +M N +QVT D+ VR+LC G++ +A
Sbjct: 118 SPEHSTFHILLSHACRAPDSSLSNVHLVLNLMVNNGVAPNQVTTDIAVRSLCESGRISEA 177
Query: 1180 CEVFTEMPTGKNTPKCFTLNFLTKHLVRTGRFDMACELFDKMIASGSRGFKPDVANYSIL 1001
++ E+ + P +T NFL KHL + G D+ E D+M + KPD+ +Y+IL
Sbjct: 178 MDLIKELSKNHSPPDTYTYNFLLKHLCKCGSLDVVYEFIDEMKETFE--VKPDLVSYTIL 235
Query: 1000 MEGLCKTRKYEHLKKAMQLLHDMKKAGCQPDRMVYATLMNGFAKINHTEEALAVYKLMKK 821
++ +C ++ +L++AM+L+ + AG +PD +Y T+M GF ++ EA+ VYK MK+
Sbjct: 236 IDNVCNSK---NLREAMRLVSALGDAGFKPDCFLYNTIMKGFCTLSKGSEAIIVYKKMKE 292
Query: 820 AGWKPDKVLYNTLIMIHSNAGDVDLALDLLKAMSYEWHRPDTFSYAPLLGALCRKERALE 641
G +PD++ YNTLI S +G V+ A L+ M + PD +Y L+ +CRK +L
Sbjct: 293 EGVEPDRITYNTLIFGLSKSGRVEEARKYLQTMVEAGYEPDAVTYTSLMNGMCRKGASLG 352
Query: 640 SLSLLKRMIKNGITGNEKSYNQVLACLARNNEIDDAMELFELMKDENIGISLTGYNAFVR 461
+LSLL+ M G N +YN +L L + +D +EL+ LMK + + + Y VR
Sbjct: 353 ALSLLEEMEARGCAPNACTYNTLLYGLCKARLMDKGIELYGLMKSNGVKLESSAYATLVR 412
Query: 460 AL 455
L
Sbjct: 413 GL 414
Score = 68.9 bits (167), Expect = 7e-09
Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 1/198 (0%)
Frame = -1
Query: 1042 SRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKAGCQPDRMVYATLMNGFAKIN 863
+ G P+ I + LC++ + + +AM L+ ++ K PD Y L+ K
Sbjct: 151 NNGVAPNQVTTDIAVRSLCESGR---ISEAMDLIKELSKNHSPPDTYTYNFLLKHLCKCG 207
Query: 862 HTEEALAVYKLMKKA-GWKPDKVLYNTLIMIHSNAGDVDLALDLLKAMSYEWHRPDTFSY 686
+ MK+ KPD V Y LI N+ ++ A+ L+ A+ +PD F Y
Sbjct: 208 SLDVVYEFIDEMKETFEVKPDLVSYTILIDNVCNSKNLREAMRLVSALGDAGFKPDCFLY 267
Query: 685 APLLGALCRKERALESLSLLKRMIKNGITGNEKSYNQVLACLARNNEIDDAMELFELMKD 506
++ C + E++ + K+M + G+ + +YN ++ L+++ +++A + + M +
Sbjct: 268 NTIMKGFCTLSKGSEAIIVYKKMKEEGVEPDRITYNTLIFGLSKSGRVEEARKYLQTMVE 327
Query: 505 ENIGISLTGYNAFVRALC 452
Y + + +C
Sbjct: 328 AGYEPDAVTYTSLMNGMC 345
>ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
[Cucumis sativus]
Length = 464
Score = 208 bits (530), Expect = 5e-51
Identities = 133/414 (32%), Positives = 220/414 (53%), Gaps = 5/414 (1%)
Frame = -1
Query: 1630 RPCRCTPSPRFLAHYMNHPKPGGARSPRELDIIERLERAATIEDAKKLYSMLTPFRIPSF 1451
+P R TPS + H PK + + ++A++ DAKKLYS F
Sbjct: 38 KPSRKTPSGQSSGH-PEKPK------------LPTVFKSASLADAKKLYSSFVSATKAPF 84
Query: 1450 S--THNAVLRNFARSGRVDDCVNMLYFM-RGKGEFTANTVTFNVIMTELGKIDDIT--GI 1286
+ HN++L+++A ++D ++ L M + + F+ + TF+++++ G D T +
Sbjct: 85 NLRVHNSLLQSYASIATLNDSISFLRHMSKVQPSFSPDQSTFHILLSTSGNRPDSTLASV 144
Query: 1285 EKLLKVMKRNECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKH 1106
+++L M N D+VT D+ VR+LC+VG V++A E+ E+ P +T N L K
Sbjct: 145 QQILNFMVTNGFNPDKVTADLAVRSLCSVGLVDEAVELVKELSQKHTPPDIYTYNHLVKQ 204
Query: 1105 LVRTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKK 926
L ++ +M S G KPD+ Y+IL++ +C + +L++AM+L+ + K
Sbjct: 205 LCKSRALSTVYNFIVEM--RSSCGAKPDLVTYTILIDNVCNSN---NLREAMRLVSLLYK 259
Query: 925 AGCQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGDVDL 746
G +PD VY T+M G+ + EA+ VYK MK+ G +PD V +NTLI S +G V
Sbjct: 260 EGFKPDCFVYNTIMKGYCMVGRGAEAIGVYKKMKEVGLEPDVVTFNTLIFGLSKSGRVKE 319
Query: 745 ALDLLKAMSYEWHRPDTFSYAPLLGALCRKERALESLSLLKRMIKNGITGNEKSYNQVLA 566
A + L M+ H PD +Y L+ +CR+ AL +LSLLK M G N +YN +L
Sbjct: 320 ARNFLDIMAEMGHFPDAVTYTSLMNGMCREGNALGALSLLKEMEAKGCNPNSCTYNTLLH 379
Query: 565 CLARNNEIDDAMELFELMKDENIGISLTGYNAFVRALCLRKMMNVVNFLFEHVV 404
L+++ +D +EL+ LMK ++ + Y+ FVRALC + +F++ V
Sbjct: 380 GLSKSRLLDRGIELYGLMKSCDMKLETASYSTFVRALCRSGRIAEAYEVFDYAV 433
Score = 97.8 bits (242), Expect = 1e-17
Identities = 76/286 (26%), Positives = 135/286 (47%), Gaps = 2/286 (0%)
Frame = -1
Query: 1459 PSFSTHNAVLRNFARSGRVDDCVNMLYFMRGKGEFTANTVTFNVIMTELGKIDDITGIEK 1280
P T + +R+ G VD+ V ++ + K + T+N ++ +L K ++ +
Sbjct: 158 PDKVTADLAVRSLCSVGLVDEAVELVKELSQK-HTPPDIYTYNHLVKQLCKSRALSTVYN 216
Query: 1279 LLKVMKRNECEA--DQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKH 1106
+ M R+ C A D VT +L+ +CN + +A + + + P CF N + K
Sbjct: 217 FIVEM-RSSCGAKPDLVTYTILIDNVCNSNNLREAMRLVSLLYKEGFKPDCFVYNTIMKG 275
Query: 1105 LVRTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKK 926
GR A ++ KM G +PDV ++ L+ GL K+ + +K+A L M +
Sbjct: 276 YCMVGRGAEAIGVYKKM---KEVGLEPDVVTFNTLIFGLSKSGR---VKEARNFLDIMAE 329
Query: 925 AGCQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGDVDL 746
G PD + Y +LMNG + + AL++ K M+ G P+ YNTL+ S + +D
Sbjct: 330 MGHFPDAVTYTSLMNGMCREGNALGALSLLKEMEAKGCNPNSCTYNTLLHGLSKSRLLDR 389
Query: 745 ALDLLKAMSYEWHRPDTFSYAPLLGALCRKERALESLSLLKRMIKN 608
++L M + +T SY+ + ALCR R E+ + +++
Sbjct: 390 GIELYGLMKSCDMKLETASYSTFVRALCRSGRIAEAYEVFDYAVES 435
Score = 90.1 bits (222), Expect = 3e-15
Identities = 80/348 (22%), Positives = 147/348 (42%), Gaps = 5/348 (1%)
Frame = -1
Query: 1669 FPTMLATHGRSALRPCRCTPSPRFLAHYM-----NHPKPGGARSPRELDIIERLERAATI 1505
F +L+T G RP S + + ++M N K + R L + ++ A +
Sbjct: 126 FHILLSTSGN---RPDSTLASVQQILNFMVTNGFNPDKVTADLAVRSLCSVGLVDEA--V 180
Query: 1504 EDAKKLYSMLTPFRIPSFSTHNAVLRNFARSGRVDDCVNMLYFMRGKGEFTANTVTFNVI 1325
E K+L TP P T+N +++ +S + N + MR + VT+ ++
Sbjct: 181 ELVKELSQKHTP---PDIYTYNHLVKQLCKSRALSTVYNFIVEMRSSCGAKPDLVTYTIL 237
Query: 1324 MTELGKIDDITGIEKLLKVMKRNECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKN 1145
+ + +++ +L+ ++ + + D + +++ C VG+ +A V+ +M
Sbjct: 238 IDNVCNSNNLREAMRLVSLLYKEGFKPDCFVYNTIMKGYCMVGRGAEAIGVYKKMKEVGL 297
Query: 1144 TPKCFTLNFLTKHLVRTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEH 965
P T N L L ++GR A D M G PD Y+ LM G+C+ +
Sbjct: 298 EPDVVTFNTLIFGLSKSGRVKEARNFLDIM---AEMGHFPDAVTYTSLMNGMCREG---N 351
Query: 964 LKKAMQLLHDMKKAGCQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNT 785
A+ LL +M+ GC P+ Y TL++G +K + + +Y LMK K + Y+T
Sbjct: 352 ALGALSLLKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSCDMKLETASYST 411
Query: 784 LIMIHSNAGDVDLALDLLKAMSYEWHRPDTFSYAPLLGALCRKERALE 641
+ +G + A ++ D +Y L L + A E
Sbjct: 412 FVRALCRSGRIAEAYEVFDYAVESKSLTDVSAYLSLESTLKSLKNARE 459
>ref|XP_004163411.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
[Cucumis sativus]
Length = 464
Score = 208 bits (529), Expect = 7e-51
Identities = 131/398 (32%), Positives = 217/398 (54%), Gaps = 5/398 (1%)
Frame = -1
Query: 1630 RPCRCTPSPRFLAHYMNHPKPGGARSPRELDIIERLERAATIEDAKKLYS-MLTPFRIP- 1457
+P R TPS + H PK + + ++A++ DAKKLYS ++ + P
Sbjct: 38 KPSRKTPSGQSSGH-PEKPK------------LPTVFKSASLADAKKLYSSFISATKAPF 84
Query: 1456 SFSTHNAVLRNFARSGRVDDCVNMLYFM-RGKGEFTANTVTFNVIMTELGKIDDIT--GI 1286
+ HN++L+++A ++D ++ L M + + F+ + TF+++++ G D T +
Sbjct: 85 NLRVHNSLLQSYASIATLNDSISFLRHMSKVQPSFSPDQSTFHILLSTSGNRPDSTLASV 144
Query: 1285 EKLLKVMKRNECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKH 1106
+++L M N D+VT D+ VR+LC+VG V++A E+ E+ P +T N L K
Sbjct: 145 QQILNFMVTNGFNPDKVTADLAVRSLCSVGLVDEAVELVKELSQKHTPPDIYTYNHLVKQ 204
Query: 1105 LVRTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKK 926
L ++ +M S G KPD+ Y+IL++ +C + +L++AM+L+ + K
Sbjct: 205 LCKSRALSTVYNFIVEM--RSSCGAKPDLVTYTILIDNVCNSN---NLREAMRLVSLLYK 259
Query: 925 AGCQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGDVDL 746
G +PD VY T+M G+ + EA+ VYK MK+ G +PD V +NTLI S +G V
Sbjct: 260 EGFKPDCFVYNTIMKGYCMVGRGAEAIGVYKKMKEVGLEPDVVTFNTLIFGLSKSGRVKE 319
Query: 745 ALDLLKAMSYEWHRPDTFSYAPLLGALCRKERALESLSLLKRMIKNGITGNEKSYNQVLA 566
A + L M+ H PD +Y L+ +CR+ AL +LSLLK M G N +YN +L
Sbjct: 320 ARNFLDIMAEMGHFPDAVTYTSLMNGMCREGNALGALSLLKEMEAKGCNPNSCTYNTLLH 379
Query: 565 CLARNNEIDDAMELFELMKDENIGISLTGYNAFVRALC 452
L+++ +D +EL+ LMK ++ + Y+ FVRALC
Sbjct: 380 GLSKSRLLDRGIELYGLMKSCDMKLETASYSTFVRALC 417
>ref|XP_006857185.1| hypothetical protein AMTR_s00065p00182300 [Amborella trichopoda]
gi|548861268|gb|ERN18652.1| hypothetical protein
AMTR_s00065p00182300 [Amborella trichopoda]
Length = 470
Score = 203 bits (516), Expect = 2e-49
Identities = 132/446 (29%), Positives = 228/446 (51%), Gaps = 16/446 (3%)
Frame = -1
Query: 1627 PCRCTPSPRFLAHYMNHPKPGGARSPR---ELDIIERLE----RAATIEDAKKLYSMLTP 1469
P PS F NH K + S + + + +L + +I +AK Y
Sbjct: 27 PSSSAPSAPFKNTKQNHKKKQSSSSTKGEQQQQLAPKLPLNLFKTPSISEAKATYDAALA 86
Query: 1468 FRIPSFST--HNAVLRNFAR-SGRVDDCVNMLYFMRGKGEFTANTVTFNVIMTELGKIDD 1298
R + ST HNA+L++F + + +++++ M+ K F + TFN+I+ D
Sbjct: 87 ARGHTRSTPFHNALLKDFCLLRPNLPNSLSLVHHMKEKSGFAPDHATFNIILGLCCSNAD 146
Query: 1297 ITGIEKLLKVMKRNECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGK------NTPK 1136
+ + + L +M + D V+ D++VR LC+ ++ACE+F ++ + + P
Sbjct: 147 MAAVHQTLALMTASGFPPDNVSCDLIVRALCSSALEDEACELFKDIASSNLKSRSSSPPD 206
Query: 1135 CFTLNFLTKHLVRTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKK 956
FT NFL +HL +T + D+ A G +PD+ Y+IL++ +C+++ +L++
Sbjct: 207 MFTFNFLVRHLCKTRAMSAVYQFIDEARALG---LEPDLVTYTILIDAVCRSK---NLRE 260
Query: 955 AMQLLHDMKKAGCQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIM 776
A +LL + +AG +PD +Y T+M G+ ++ EA+ VYK M++ G +PD V YNTLI
Sbjct: 261 ATRLLGVLGEAGYKPDCFLYNTIMKGYCLLDRGAEAITVYKKMREEGCEPDLVTYNTLIY 320
Query: 775 IHSNAGDVDLALDLLKAMSYEWHRPDTFSYAPLLGALCRKERALESLSLLKRMIKNGITG 596
SNAG D+A+ L+ M E H PDT +Y L+ +CRK A +L LLK M G
Sbjct: 321 GLSNAGKEDIAMKYLRVMVEEGHLPDTVTYTSLMNGMCRKGNATGALELLKEMEDRGCEP 380
Query: 595 NEKSYNQVLACLARNNEIDDAMELFELMKDENIGISLTGYNAFVRALCLRKMMNVVNFLF 416
N +Y+ +L L + +D +E++ +MK+ ++ + Y +RALC + + +F
Sbjct: 381 NSCTYSTLLQGLFKAGNLDKGLEVYGVMKEGSMKMEAACYAVILRALCRGERVADAYEVF 440
Query: 415 EHVVTTGTKVPYEAAKDIMRCAMYEA 338
++ V A+K + A Y A
Sbjct: 441 DYAV---------ASKSLTDVAAYSA 457
>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
Length = 472
Score = 200 bits (509), Expect = 1e-48
Identities = 124/400 (31%), Positives = 213/400 (53%), Gaps = 9/400 (2%)
Frame = -1
Query: 1576 PKPGG----ARSPRELDIIERLERAATIEDAKKLYSMLTPFRIPSFST--HNAVLRNFAR 1415
P+P G R+P E + + + DAKKL++ +T HNA+L++++
Sbjct: 47 PQPSGKTKKTRTPIEDPKSPVIFNSPNLLDAKKLFASITTTSTTPLDLRFHNALLQSYSS 106
Query: 1414 SGRVDDCVNML-YFMRGKGEFTANTVTFNVIMTELGKI--DDITGIEKLLKVMKRNECEA 1244
V+D ++ L + ++ + F+ T+++++++ K D++ + + L +M +
Sbjct: 107 ISTVNDSISFLRHMIKSQPSFSPERSTYHILLSQSCKSPNSDLSAVHQTLNLMVTHGFPP 166
Query: 1243 DQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKHLVRTGRFDMACELF 1064
D+VT D+ VR+LC+ G+ E A E+ E+ + P FT NF+ +HL +T
Sbjct: 167 DRVTTDIAVRSLCSAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFI 226
Query: 1063 DKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKAGCQPDRMVYATLM 884
D++ S KPD+ Y+IL++ +C + +L++A +LL + +AG +PD VY T+M
Sbjct: 227 DEL--QNSFQLKPDLVTYTILIDNVCNGK---NLREATRLLEVLGEAGFKPDCYVYNTIM 281
Query: 883 NGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGDVDLALDLLKAMSYEWHR 704
G+ ++ EA+ VYK MK+ G +PD V YNTLI S +G V A L M+ H
Sbjct: 282 KGYCILDKGSEAIGVYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMGHF 341
Query: 703 PDTFSYAPLLGALCRKERALESLSLLKRMIKNGITGNEKSYNQVLACLARNNEIDDAMEL 524
PD +Y L+ LCR+ AL +L+LL+ M G + N +YN +L L + ++ +EL
Sbjct: 342 PDAVTYTSLMNGLCREGNALGALALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIEL 401
Query: 523 FELMKDENIGISLTGYNAFVRALCLRKMMNVVNFLFEHVV 404
+ +MK + + Y FVRALC + F++VV
Sbjct: 402 YGVMKSGGMKLEKASYATFVRALCKEGRVAEAYEAFDYVV 441
>gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 464
Score = 196 bits (497), Expect = 4e-47
Identities = 117/381 (30%), Positives = 205/381 (53%), Gaps = 5/381 (1%)
Frame = -1
Query: 1531 ERLERAATIEDAKKLY-SMLTPFRIP-SFSTHNAVLRNFARSGRVDDCVNMLYFM-RGKG 1361
E L ++ + AKK++ S++ + P HN +L+++A V+D ++ L+ M +
Sbjct: 58 EPLFKSPDLSSAKKVFNSIVVTTKAPIDLRFHNTLLQSYASVSTVNDSISFLHHMVKAHP 117
Query: 1360 EFTANTVTFNVIMTELGKIDD--ITGIEKLLKVMKRNECEADQVTMDVLVRTLCNVGQVE 1187
F+ + T+++++++ K D ++ + + L +M N + +QVT DV +R+LC G+++
Sbjct: 118 SFSPDRSTYHILLSQSCKAPDSSLSPVRQTLNLMVTNGLKPNQVTTDVAIRSLCEAGRID 177
Query: 1186 KACEVFTEMPTGKNTPKCFTLNFLTKHLVRTGRFDMACELFDKMIASGSRGFKPDVANYS 1007
A E+ E+ + P FT NFL K+L + D M S G KPD+ Y+
Sbjct: 178 HAVELVKELSLKHSPPDNFTFNFLVKNLCKCRTLSTVYGFIDDM--KSSFGIKPDLVTYT 235
Query: 1006 ILMEGLCKTRKYEHLKKAMQLLHDMKKAGCQPDRMVYATLMNGFAKINHTEEALAVYKLM 827
IL++ +C ++ +L++AM+L+ + ++G +PD VY T+M G+ ++ E + VYK M
Sbjct: 236 ILIDNVCNSK---NLREAMRLVGVLNESGFKPDCFVYNTIMKGYCMLSKGSEIIEVYKKM 292
Query: 826 KKAGWKPDKVLYNTLIMIHSNAGDVDLALDLLKAMSYEWHRPDTFSYAPLLGALCRKERA 647
K+ G +PD V YNTLI S +G V A L M H PD +Y L+ +CR+ A
Sbjct: 293 KEEGVEPDLVTYNTLIFGLSKSGRVKEARKYLDIMVESGHFPDAVTYTSLMNGMCREGNA 352
Query: 646 LESLSLLKRMIKNGITGNEKSYNQVLACLARNNEIDDAMELFELMKDENIGISLTGYNAF 467
L ++ LL+ M + G + N +YN +L L + ++ MEL+ MK + + Y
Sbjct: 353 LGAVLLLEEMERKGCSPNSCTYNTLLHGLCKGRLMEKGMELYRAMKSAGMMLEKASYATL 412
Query: 466 VRALCLRKMMNVVNFLFEHVV 404
VRALC + +F++ V
Sbjct: 413 VRALCREGRVAEAYEVFDYAV 433
Score = 100 bits (248), Expect = 3e-18
Identities = 74/292 (25%), Positives = 138/292 (47%), Gaps = 1/292 (0%)
Frame = -1
Query: 1480 MLTPFRIPSFSTHNAVLRNFARSGRVDDCVNMLYFMRGKGEFTANTVTFNVIMTELGKID 1301
M+T P+ T + +R+ +GR+D V ++ + K N TFN ++ L K
Sbjct: 151 MVTNGLKPNQVTTDVAIRSLCEAGRIDHAVELVKELSLKHSPPDN-FTFNFLVKNLCKCR 209
Query: 1300 DITGIEKLLKVMKRN-ECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTL 1124
++ + + MK + + D VT +L+ +CN + +A + + P CF
Sbjct: 210 TLSTVYGFIDDMKSSFGIKPDLVTYTILIDNVCNSKNLREAMRLVGVLNESGFKPDCFVY 269
Query: 1123 NFLTKHLVRTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQL 944
N + K + E++ KM G +PD+ Y+ L+ GL K+ + +K+A +
Sbjct: 270 NTIMKGYCMLSKGSEIIEVYKKM---KEEGVEPDLVTYNTLIFGLSKSGR---VKEARKY 323
Query: 943 LHDMKKAGCQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSN 764
L M ++G PD + Y +LMNG + + A+ + + M++ G P+ YNTL+
Sbjct: 324 LDIMVESGHFPDAVTYTSLMNGMCREGNALGAVLLLEEMERKGCSPNSCTYNTLLHGLCK 383
Query: 763 AGDVDLALDLLKAMSYEWHRPDTFSYAPLLGALCRKERALESLSLLKRMIKN 608
++ ++L +AM + SYA L+ ALCR+ R E+ + +++
Sbjct: 384 GRLMEKGMELYRAMKSAGMMLEKASYATLVRALCREGRVAEAYEVFDYAVES 435
Score = 74.3 bits (181), Expect = 2e-10
Identities = 59/226 (26%), Positives = 97/226 (42%)
Frame = -1
Query: 1459 PSFSTHNAVLRNFARSGRVDDCVNMLYFMRGKGEFTANTVTFNVIMTELGKIDDITGIEK 1280
P T+ ++ N S + + + ++ + G F + +N IM + + I +
Sbjct: 229 PDLVTYTILIDNVCNSKNLREAMRLVGVLNESG-FKPDCFVYNTIMKGYCMLSKGSEIIE 287
Query: 1279 LLKVMKRNECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKHLV 1100
+ K MK E D VT + L+ L G+V++A + M + P T L +
Sbjct: 288 VYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKYLDIMVESGHFPDAVTYTSLMNGMC 347
Query: 1099 RTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKAG 920
R G A L ++M +G P+ Y+ L+ GLCK R E K M+L MK AG
Sbjct: 348 REGNALGAVLLLEEM---ERKGCSPNSCTYNTLLHGLCKGRLME---KGMELYRAMKSAG 401
Query: 919 CQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTL 782
++ YATL+ + EA V+ ++ D Y+TL
Sbjct: 402 MMLEKASYATLVRALCREGRVAEAYEVFDYAVESKSLTDVAAYSTL 447
>ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
isoform X1 [Cicer arietinum]
gi|502155526|ref|XP_004510106.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X2 [Cicer arietinum]
Length = 468
Score = 194 bits (493), Expect = 1e-46
Identities = 117/364 (32%), Positives = 206/364 (56%), Gaps = 6/364 (1%)
Frame = -1
Query: 1525 LERAATIEDAKKLY-SMLTPFRIPS-FSTHNAVLRNFARSGRVDDCVNMLYFM-RGKGEF 1355
L ++ +++AK ++ S++ +P+ F HN++L+++A ++D + L M + F
Sbjct: 60 LFKSPCLQEAKSIFNSIVKSSNVPNDFRFHNSLLQSYASVSTINDSIAFLRHMTKTHPSF 119
Query: 1354 TANTVTFNVIMTELGKIDDIT--GIEKLLKVMKRNECEADQVTMDVLVRTLCNVGQVEKA 1181
T + T+++++T+ K D T I + L +M + D+VT+D+ VR+LC+ G++++A
Sbjct: 120 TPDKSTYHILLTQSCKSTDTTLSQIHQTLNLMVSDGVSPDKVTVDLAVRSLCSAGRMDEA 179
Query: 1180 CEVFTEMPTGKNTPKCFTLNFLTKHLVRTGRFDMACELFDKMIASGSR-GFKPDVANYSI 1004
E+ E+ + +P +T NFL KHL + L+ +I S+ G KPD+ ++I
Sbjct: 180 VELIKELSSKHCSPDIYTFNFLVKHLCKCLTLST---LYSFIIEMRSKFGVKPDLVTFTI 236
Query: 1003 LMEGLCKTRKYEHLKKAMQLLHDMKKAGCQPDRMVYATLMNGFAKINHTEEALAVYKLMK 824
L++ +C + +L++ + L+ + + G + D Y T+M G+ K+ EA+ VY MK
Sbjct: 237 LIDNVCNAK---NLRETLSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIEVYNKMK 293
Query: 823 KAGWKPDKVLYNTLIMIHSNAGDVDLALDLLKAMSYEWHRPDTFSYAPLLGALCRKERAL 644
+AG +PD + YNTLI S +G V A LL+ M+ + H PD +Y L+ LCRK L
Sbjct: 294 EAGVEPDLITYNTLIYGLSKSGRVMEAKKLLRVMAEKGHFPDEVTYTSLMNGLCRKGEIL 353
Query: 643 ESLSLLKRMIKNGITGNEKSYNQVLACLARNNEIDDAMELFELMKDENIGISLTGYNAFV 464
+++LL+ M G + N +YN +L L ++ D AMEL+ MK + + + Y FV
Sbjct: 354 SAIALLEEMEAIGCSPNSCTYNTLLHGLCKSRLFDKAMELYGEMKSGCLKLEMASYATFV 413
Query: 463 RALC 452
RALC
Sbjct: 414 RALC 417
Score = 100 bits (248), Expect = 3e-18
Identities = 75/324 (23%), Positives = 152/324 (46%), Gaps = 1/324 (0%)
Frame = -1
Query: 1459 PSFSTHNAVLRNFARSGRVDDCVNMLYFMRGKGEFTANTVTFNVIMTELGKIDDITGIEK 1280
P T + +R+ +GR+D+ V ++ + K + + TFN ++ L K ++ +
Sbjct: 158 PDKVTVDLAVRSLCSAGRMDEAVELIKELSSK-HCSPDIYTFNFLVKHLCKCLTLSTLYS 216
Query: 1279 -LLKVMKRNECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKHL 1103
++++ + + D VT +L+ +CN + + + + + C+ N + K
Sbjct: 217 FIIEMRSKFGVKPDLVTFTILIDNVCNAKNLRETLSLMSVLDEEGFKLDCYAYNTIMKGY 276
Query: 1102 VRTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKA 923
+ GR + A E+++KM +G +PD+ Y+ L+ GL K+ + KK LL M +
Sbjct: 277 CKMGRGNEAIEVYNKMKEAG---VEPDLITYNTLIYGLSKSGRVMEAKK---LLRVMAEK 330
Query: 922 GCQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGDVDLA 743
G PD + Y +LMNG + A+A+ + M+ G P+ YNTL+ + D A
Sbjct: 331 GHFPDEVTYTSLMNGLCRKGEILSAIALLEEMEAIGCSPNSCTYNTLLHGLCKSRLFDKA 390
Query: 742 LDLLKAMSYEWHRPDTFSYAPLLGALCRKERALESLSLLKRMIKNGITGNEKSYNQVLAC 563
++L M + + SYA + ALCR R ++ + ++ ++ L
Sbjct: 391 MELYGEMKSGCLKLEMASYATFVRALCRAGRIADAYEVFDYAVE----------SKSLTD 440
Query: 562 LARNNEIDDAMELFELMKDENIGI 491
+A + ++ ++ F+ K++ + I
Sbjct: 441 VAAYSTLESTLKWFKKAKEQGLKI 464
Score = 66.6 bits (161), Expect = 3e-08
Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 5/241 (2%)
Frame = -1
Query: 1489 LYSMLTPFRI-----PSFSTHNAVLRNFARSGRVDDCVNMLYFMRGKGEFTANTVTFNVI 1325
LYS + R P T ++ N + + + ++++ + +G F + +N I
Sbjct: 214 LYSFIIEMRSKFGVKPDLVTFTILIDNVCNAKNLRETLSLMSVLDEEG-FKLDCYAYNTI 272
Query: 1324 MTELGKIDDITGIEKLLKVMKRNECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKN 1145
M K+ ++ MK E D +T + L+ L G+V +A ++ M +
Sbjct: 273 MKGYCKMGRGNEAIEVYNKMKEAGVEPDLITYNTLIYGLSKSGRVMEAKKLLRVMAEKGH 332
Query: 1144 TPKCFTLNFLTKHLVRTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEH 965
P T L L R G A L ++M A G P+ Y+ L+ GLCK+R ++
Sbjct: 333 FPDEVTYTSLMNGLCRKGEILSAIALLEEMEAIGC---SPNSCTYNTLLHGLCKSRLFD- 388
Query: 964 LKKAMQLLHDMKKAGCQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNT 785
KAM+L +MK + + YAT + + +A V+ ++ D Y+T
Sbjct: 389 --KAMELYGEMKSGCLKLEMASYATFVRALCRAGRIADAYEVFDYAVESKSLTDVAAYST 446
Query: 784 L 782
L
Sbjct: 447 L 447
>ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539072|gb|EEF40668.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 458
Score = 193 bits (490), Expect = 2e-46
Identities = 113/381 (29%), Positives = 212/381 (55%), Gaps = 5/381 (1%)
Frame = -1
Query: 1531 ERLERAATIEDAKKLY-SMLTPFRIP-SFSTHNAVLRNFARSGRVDDCVNML-YFMRGKG 1361
+RL ++ + +AK+++ S+++ R+P H++ L++++ +DD +++L + ++
Sbjct: 52 KRLFKSPELNEAKEIFNSLISTTRVPLDLRFHHSFLQSYSSISTIDDSISLLRHMIKTLP 111
Query: 1360 EFTANTVTFNVIMTELGKIDD--ITGIEKLLKVMKRNECEADQVTMDVLVRTLCNVGQVE 1187
FT T+++++++ K D ++ + ++L +M N QVT+D+ VR LC+ G+ +
Sbjct: 112 SFTPTISTYHILLSQSCKAPDPTLSPVHQILNLMVNNGFMPTQVTVDIAVRALCSAGKED 171
Query: 1186 KACEVFTEMPTGKNTPKCFTLNFLTKHLVRTGRFDMACELFDKMIASGSRGFKPDVANYS 1007
A ++ E+ + P FT NFL K L + D+M +S +P++ Y+
Sbjct: 172 DAVKLVKELSLKHSKPDSFTYNFLVKCLCKCRALSNVYSFIDEMRSSFD--LEPNLVTYT 229
Query: 1006 ILMEGLCKTRKYEHLKKAMQLLHDMKKAGCQPDRMVYATLMNGFAKINHTEEALAVYKLM 827
IL++ +C ++ +L++AM+LL +++ G +PD VY T+M G+ ++ +A+ V+K M
Sbjct: 230 ILIDNVCNSK---NLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAIQVFKKM 286
Query: 826 KKAGWKPDKVLYNTLIMIHSNAGDVDLALDLLKAMSYEWHRPDTFSYAPLLGALCRKERA 647
K+ G +PD + YNTLI S G V A LK M H PD +Y L+ LCRK A
Sbjct: 287 KEEGIEPDLITYNTLIFGLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNGLCRKGDA 346
Query: 646 LESLSLLKRMIKNGITGNEKSYNQVLACLARNNEIDDAMELFELMKDENIGISLTGYNAF 467
L +L+LL+ M G + N +YN +L L + ++ +EL+ ++K+ + + Y F
Sbjct: 347 LGALALLEDMEMKGCSPNSCTYNTLLYGLCKERLLEKGIELYNVIKEGGMLLDTASYATF 406
Query: 466 VRALCLRKMMNVVNFLFEHVV 404
VRALC + +F++ V
Sbjct: 407 VRALCREGKVAEAYEVFDYAV 427
>ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 501
Score = 190 bits (483), Expect = 1e-45
Identities = 113/388 (29%), Positives = 209/388 (53%), Gaps = 8/388 (2%)
Frame = -1
Query: 1591 HYMNHPKPGGARSPRELDIIERLERAATIEDAKKLY-SMLTPFRIPSFST-HNAVLRNFA 1418
H ++SP+ + + ++ +++AK ++ S + P S HN++L+++A
Sbjct: 42 HQKQQQSQSQSQSPKPVSVF----KSPNLQEAKSIFNSFVNSSNAPIDSRFHNSLLQSYA 97
Query: 1417 RSGRVDDCVNMLYFM-RGKGEFTANTVTFNVIMTELGKIDD-----ITGIEKLLKVMKRN 1256
++D + L M + F+ + T+++++T K D ++ I + L +M +
Sbjct: 98 SISTINDSIAFLRHMTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSD 157
Query: 1255 ECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKHLVRTGRFDMA 1076
D+ T+D+ VR+LC +V+ A E+ E+ + +P ++ NFL K+L ++ +
Sbjct: 158 GISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLV 217
Query: 1075 CELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKAGCQPDRMVY 896
D+M KP++ Y+IL++ +C T+ +L++A +L+ +++ G +PD +Y
Sbjct: 218 YAFIDEMRTKFD--VKPNLVTYTILIDNVCNTK---NLREATRLVDILEEEGFKPDCFLY 272
Query: 895 ATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGDVDLALDLLKAMSY 716
T+M G+ ++ EA+ VY MK+ G +PD + YNTLI S +G V A LL+ M+
Sbjct: 273 NTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAE 332
Query: 715 EWHRPDTFSYAPLLGALCRKERALESLSLLKRMIKNGITGNEKSYNQVLACLARNNEIDD 536
+ H PD +Y L+ +CRK L +L+LL+ M G + N +YN +L L ++ D
Sbjct: 333 KGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDK 392
Query: 535 AMELFELMKDENIGISLTGYNAFVRALC 452
AMEL+ MK + + + + Y FVRALC
Sbjct: 393 AMELYGAMKSDGLKLDMASYATFVRALC 420
Score = 103 bits (258), Expect = 2e-19
Identities = 75/301 (24%), Positives = 141/301 (46%), Gaps = 1/301 (0%)
Frame = -1
Query: 1459 PSFSTHNAVLRNFARSGRVDDCVNMLYFMRGKGEFTANTVTFNVIMTELGKIDDITGIEK 1280
P T + +R+ + RVDD V ++ + K + + ++N ++ L K ++ +
Sbjct: 161 PDKGTVDLAVRSLCTADRVDDAVELIKELSSK-HCSPDIYSYNFLVKNLCKSRTLSLVYA 219
Query: 1279 LLKVMKRN-ECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKHL 1103
+ M+ + + + VT +L+ +CN + +A + + P CF N + K
Sbjct: 220 FIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGY 279
Query: 1102 VRTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKA 923
R A E++++M +G +PD+ Y+ L+ GL K+ + KK LL M +
Sbjct: 280 CMLSRGSEAIEVYNRM---KEKGVEPDLITYNTLIFGLSKSGRVSEAKK---LLRVMAEK 333
Query: 922 GCQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGDVDLA 743
G PD + Y +LMNG + T ALA+ + M+ G P+ YNTL+ + D A
Sbjct: 334 GHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKA 393
Query: 742 LDLLKAMSYEWHRPDTFSYAPLLGALCRKERALESLSLLKRMIKNGITGNEKSYNQVLAC 563
++L AM + + D SYA + ALC R ++ + +++ + +Y+ + +
Sbjct: 394 MELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYEVFDYAVESKSLSDVAAYSTLEST 453
Query: 562 L 560
L
Sbjct: 454 L 454
>ref|XP_004232547.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
[Solanum lycopersicum]
Length = 469
Score = 188 bits (478), Expect = 6e-45
Identities = 121/403 (30%), Positives = 213/403 (52%), Gaps = 15/403 (3%)
Frame = -1
Query: 1615 TPSPRFLAHYMNHPKPGGARSPRELDIIERLERAA-------TIEDAKKLY-SMLTPFRI 1460
+P P HY +PK + + I E ++ ++ DAK L+ S+++ R
Sbjct: 29 SPPPTSKPHY--YPKKSQSPKKKPTSITEPQLPSSILAFDSTSLSDAKTLFNSLISSTRN 86
Query: 1459 PSFST--HNAVLRNFARSGRVDDCVNML-YFMRGKGEFTANTVTFNVIMTELGKIDDIT- 1292
PS +NAVL++F+ + + D + L + ++ F+ + T++V++ + K D++
Sbjct: 87 PSTDNKFYNAVLQSFSSNSTLQDSIFFLNHMIKVHPPFSPDRFTYHVLLVQSCKSVDLSL 146
Query: 1291 -GIEKLLKVMKRNECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFL 1115
+ ++L +M N ++V+ D+ VRTLC+ G E+A E+ E+ + + P +T NF+
Sbjct: 147 SPVHQVLNLMTTNGFPPNKVSTDIAVRTLCSSGHEEQAIELVKELSSKDSPPDTYTYNFI 206
Query: 1114 TKHLVRTGRFDMACELFDKMIASGSRGF--KPDVANYSILMEGLCKTRKYEHLKKAMQLL 941
+HL + + + I GF KPD+ Y+I+++ +C ++ +L++A +LL
Sbjct: 207 IRHLCK----NRPLSTMNNFIKEMREGFDIKPDLVTYTIMIDNVCNSK---NLREATRLL 259
Query: 940 HDMKKAGCQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNA 761
+ + G +PD VY T+M G+ ++ E L VYK M++ G KPD V YNTLI S +
Sbjct: 260 GVLSEEGYKPDCYVYNTIMKGYCMLSQGGEVLGVYKKMQEEGVKPDLVTYNTLIYGLSKS 319
Query: 760 GDVDLALDLLKAMSYEWHRPDTFSYAPLLGALCRKERALESLSLLKRMIKNGITGNEKSY 581
G V A L M E H PD +Y L+ +CR+ L +++LL++M G N +Y
Sbjct: 320 GRVKDAKKFLNVMMEEGHVPDAVTYTSLMNGMCREADPLGAVALLEKMEARGCAPNSCTY 379
Query: 580 NQVLACLARNNEIDDAMELFELMKDENIGISLTGYNAFVRALC 452
N +L L + +D M+L+++MK + Y F+RALC
Sbjct: 380 NTLLHGLCKGRLLDKGMKLYDVMKQNGTKLETGSYGTFLRALC 422
Score = 60.1 bits (144), Expect = 3e-06
Identities = 54/226 (23%), Positives = 91/226 (40%)
Frame = -1
Query: 1459 PSFSTHNAVLRNFARSGRVDDCVNMLYFMRGKGEFTANTVTFNVIMTELGKIDDITGIEK 1280
P T+ ++ N S + + +L + +G + + +N IM + +
Sbjct: 234 PDLVTYTIMIDNVCNSKNLREATRLLGVLSEEG-YKPDCYVYNTIMKGYCMLSQGGEVLG 292
Query: 1279 LLKVMKRNECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKHLV 1100
+ K M+ + D VT + L+ L G+V+ A + M + P T L +
Sbjct: 293 VYKKMQEEGVKPDLVTYNTLIYGLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNGMC 352
Query: 1099 RTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKAG 920
R A L +KM A RG P+ Y+ L+ GLCK R L K M+L MK+ G
Sbjct: 353 READPLGAVALLEKMEA---RGCAPNSCTYNTLLHGLCKGRL---LDKGMKLYDVMKQNG 406
Query: 919 CQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTL 782
+ + Y T + + +A V+ ++ D Y TL
Sbjct: 407 TKLETGSYGTFLRALCRNGRVADAYEVFDYAIESKSLTDVAAYTTL 452
>ref|XP_002306437.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222855886|gb|EEE93433.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 462
Score = 187 bits (476), Expect = 1e-44
Identities = 115/400 (28%), Positives = 213/400 (53%), Gaps = 7/400 (1%)
Frame = -1
Query: 1582 NHPKPGGARSPRELDIIERLERAATIEDAKKLY-SMLTPFRIP---SFSTHNAVLRNFAR 1415
N PKP +P + L + +++ +AK L+ S ++ + P + HN+ L+++
Sbjct: 40 NSPKPHETETPPPH---KSLFKTSSLNEAKSLFNSFISTTKAPLLDNLRLHNSFLQSYTS 96
Query: 1414 SGRVDDCVNML-YFMRGKGEFTANTVTFNVIMTELGKIDD--ITGIEKLLKVMKRNECEA 1244
+DD +++L + ++ + + T++V++++ + D ++ +K+L +M +
Sbjct: 97 ISTLDDSISLLDHMVKTLPSLSPDRSTYHVLLSQSCREPDSSLSSAQKVLNLMINKGFKP 156
Query: 1243 DQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKHLVRTGRFDMACELF 1064
+Q T+DV +R+LC+ G+V+ A + E + + P FT NFL K L ++ F+
Sbjct: 157 NQFTVDVAIRSLCSAGRVDDAILLVKEFSSKHSKPDTFTYNFLVKCLCKSRIFNSVYSFI 216
Query: 1063 DKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKAGCQPDRMVYATLM 884
D+M S KPD+ Y+IL++ +C + ++++A +L+ +K+ G +PD +Y T+M
Sbjct: 217 DEM--KSSFDIKPDLVTYTILIDNVCNAK---NIREADRLVAVLKECGLKPDAFLYNTIM 271
Query: 883 NGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGDVDLALDLLKAMSYEWHR 704
G+ +N EA+ +YK MK+ G +PD V YNTLI S G V A LLK M H
Sbjct: 272 KGYCLLNKGIEAVRIYKQMKEEGVEPDLVTYNTLIFGLSKCGRVSEAKKLLKIMVESGHF 331
Query: 703 PDTFSYAPLLGALCRKERALESLSLLKRMIKNGITGNEKSYNQVLACLARNNEIDDAMEL 524
PD +Y L+ +CR+ L + +LL+ M G + N +YN +L + ++ +EL
Sbjct: 332 PDAVTYTSLMNGMCREGDVLGAAALLEEMELKGCSPNSCTYNTLLHGFCKGRRLNKGVEL 391
Query: 523 FELMKDENIGISLTGYNAFVRALCLRKMMNVVNFLFEHVV 404
+ ++K + + Y FVRALC + +F++ V
Sbjct: 392 YGVIKKGGMKLETASYATFVRALCREGRVAEAYEVFDYAV 431
Score = 85.9 bits (211), Expect = 5e-14
Identities = 63/273 (23%), Positives = 119/273 (43%)
Frame = -1
Query: 1459 PSFSTHNAVLRNFARSGRVDDCVNMLYFMRGKGEFTANTVTFNVIMTELGKIDDITGIEK 1280
P T+N +++ +S + + + M+ + + VT+ +++ + +I ++
Sbjct: 191 PDTFTYNFLVKCLCKSRIFNSVYSFIDEMKSSFDIKPDLVTYTILIDNVCNAKNIREADR 250
Query: 1279 LLKVMKRNECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKHLV 1100
L+ V+K + D + +++ C + + +A ++ +M P T N L L
Sbjct: 251 LVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEAVRIYKQMKEEGVEPDLVTYNTLIFGLS 310
Query: 1099 RTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKAG 920
+ GR A +L M+ SG PD Y+ LM G+C+ + A LL +M+ G
Sbjct: 311 KCGRVSEAKKLLKIMVESGHF---PDAVTYTSLMNGMCREGD---VLGAAALLEEMELKG 364
Query: 919 CQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGDVDLAL 740
C P+ Y TL++GF K + + +Y ++KK G K + Y T + G V A
Sbjct: 365 CSPNSCTYNTLLHGFCKGRRLNKGVELYGVIKKGGMKLETASYATFVRALCREGRVAEAY 424
Query: 739 DLLKAMSYEWHRPDTFSYAPLLGALCRKERALE 641
++ D +Y L L ++A E
Sbjct: 425 EVFDYAVESKSLTDVAAYTTLESTLKWLKKARE 457
Score = 60.1 bits (144), Expect = 3e-06
Identities = 59/324 (18%), Positives = 124/324 (38%), Gaps = 4/324 (1%)
Frame = -1
Query: 1273 KVMKRNECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTL---NFLTKHL 1103
K+ K+N + + ++L + +A +F + P L N +
Sbjct: 35 KLTKKNSPKPHETETPPPHKSLFKTSSLNEAKSLFNSFISTTKAPLLDNLRLHNSFLQSY 94
Query: 1102 VRTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKA 923
D + L D M+ + PD + Y +L+ C+ L A ++L+ M
Sbjct: 95 TSISTLDDSISLLDHMVKT-LPSLSPDRSTYHVLLSQSCREPD-SSLSSAQKVLNLMINK 152
Query: 922 GCQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGDVDLA 743
G +P++ + ++A+ + K KPD YN L+ + +
Sbjct: 153 GFKPNQFTVDVAIRSLCSAGRVDDAILLVKEFSSKHSKPDTFTYNFLVKCLCKSRIFNSV 212
Query: 742 LDLLKAMSYEWH-RPDTFSYAPLLGALCRKERALESLSLLKRMIKNGITGNEKSYNQVLA 566
+ M + +PD +Y L+ +C + E+ L+ + + G+ + YN ++
Sbjct: 213 YSFIDEMKSSFDIKPDLVTYTILIDNVCNAKNIREADRLVAVLKECGLKPDAFLYNTIMK 272
Query: 565 CLARNNEIDDAMELFELMKDENIGISLTGYNAFVRALCLRKMMNVVNFLFEHVVTTGTKV 386
N+ +A+ +++ MK+E + L YN + L ++ L + +V +G
Sbjct: 273 GYCLLNKGIEAVRIYKQMKEEGVEPDLVTYNTLIFGLSKCGRVSEAKKLLKIMVESGHFP 332
Query: 385 PYEAAKDIMRCAMYEASIQGSNSL 314
+M E + G+ +L
Sbjct: 333 DAVTYTSLMNGMCREGDVLGAAAL 356
>ref|XP_006340813.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
[Solanum tuberosum]
Length = 467
Score = 187 bits (474), Expect = 2e-44
Identities = 113/379 (29%), Positives = 207/379 (54%), Gaps = 8/379 (2%)
Frame = -1
Query: 1516 AATIEDAKKLY-SMLTPFRIPSFST--HNAVLRNFARSGRVDDCVNML-YFMRGKGEFTA 1349
+ ++ DAK L+ S+++ R P+ +NAVL++F+ + + D + L + ++ F+
Sbjct: 65 STSLSDAKTLFNSLISNSRNPTSDNKFYNAVLQSFSSNSTLQDSIFFLNHVIKVHPPFSP 124
Query: 1348 NTVTFNVIMTELGKIDDIT--GIEKLLKVMKRNECEADQVTMDVLVRTLCNVGQVEKACE 1175
+ T++V++ + K D++ + ++L +M N ++V+ D+ VRTLC+ G E+A E
Sbjct: 125 DRFTYHVLLIQSCKSVDLSLSPVHQVLNLMTTNGFPPNKVSTDIAVRTLCSSGHEEQAIE 184
Query: 1174 VFTEMPTGKNTPKCFTLNFLTKHLVRTGRFDMACELFDKMIASGSRGF--KPDVANYSIL 1001
+ E+ + + P +T NF+ +HL + + + I GF KPD+ Y+I+
Sbjct: 185 LVKELSSKDSPPDTYTYNFIVRHLCK----NRPLSTMNNFIKEMREGFDIKPDLVTYTIM 240
Query: 1000 MEGLCKTRKYEHLKKAMQLLHDMKKAGCQPDRMVYATLMNGFAKINHTEEALAVYKLMKK 821
++ +C ++ +L++A +LL + + G +PD VY T+M G+ ++ E L VYK M++
Sbjct: 241 IDNVCNSK---NLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGEVLGVYKKMQE 297
Query: 820 AGWKPDKVLYNTLIMIHSNAGDVDLALDLLKAMSYEWHRPDTFSYAPLLGALCRKERALE 641
G KPD V YNTLI S +G V A L M E H PD +Y L+ +CR+ L
Sbjct: 298 EGVKPDLVTYNTLIYGLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNGMCREADPLG 357
Query: 640 SLSLLKRMIKNGITGNEKSYNQVLACLARNNEIDDAMELFELMKDENIGISLTGYNAFVR 461
+++LL++M G N +YN +L L + +D M+L+++MK + + Y F+R
Sbjct: 358 AVALLEKMEARGCAPNSCTYNTLLHGLCKGRLLDKGMKLYDVMKQNSTKLETGSYGTFLR 417
Query: 460 ALCLRKMMNVVNFLFEHVV 404
ALC + +F++ +
Sbjct: 418 ALCRNGRVAEAYDVFDYAI 436
Score = 58.5 bits (140), Expect = 9e-06
Identities = 54/226 (23%), Positives = 90/226 (39%)
Frame = -1
Query: 1459 PSFSTHNAVLRNFARSGRVDDCVNMLYFMRGKGEFTANTVTFNVIMTELGKIDDITGIEK 1280
P T+ ++ N S + + +L + +G + + +N IM + +
Sbjct: 232 PDLVTYTIMIDNVCNSKNLREATRLLGVLSEEG-YKPDCYVYNTIMKGYCMLSQGGEVLG 290
Query: 1279 LLKVMKRNECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKHLV 1100
+ K M+ + D VT + L+ L G+V+ A + M + P T L +
Sbjct: 291 VYKKMQEEGVKPDLVTYNTLIYGLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNGMC 350
Query: 1099 RTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKAG 920
R A L +KM A RG P+ Y+ L+ GLCK R L K M+L MK+
Sbjct: 351 READPLGAVALLEKMEA---RGCAPNSCTYNTLLHGLCKGRL---LDKGMKLYDVMKQNS 404
Query: 919 CQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTL 782
+ + Y T + + EA V+ ++ D Y TL
Sbjct: 405 TKLETGSYGTFLRALCRNGRVAEAYDVFDYAIESKSLTDVAAYTTL 450
>ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
isoform X1 [Citrus sinensis]
gi|568825365|ref|XP_006467050.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X2 [Citrus sinensis]
gi|568825367|ref|XP_006467051.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X3 [Citrus sinensis]
Length = 465
Score = 186 bits (473), Expect = 2e-44
Identities = 123/417 (29%), Positives = 214/417 (51%), Gaps = 9/417 (2%)
Frame = -1
Query: 1627 PCRCTPSP-RFLAHYMNHPKPGGA--RSPRELDIIERLERAATIEDAKKLYSMLTP--FR 1463
P + SP +FL N K A +S ++ + ++ + +A K+++ L +
Sbjct: 23 PTQALKSPHQFLYKNENPSKKSAAANKSEKKTPAPAVIFKSPELSEAIKIFNSLVTATMQ 82
Query: 1462 IPSFST-HNAVLRNFARSGRVDDCVNML-YFMRGKGEFTANTVTFNVIMTELGKIDD--I 1295
P T HN++L+++A VDD +++L + ++ F + T+++++ + + D
Sbjct: 83 TPRDRTFHNSLLQSYASISTVDDSISLLNHMIKANPSFNPDRSTYHILLAQSCQAPDNSF 142
Query: 1294 TGIEKLLKVMKRNECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFL 1115
+ I K L +M N +Q T D+ VR+LC+V +++ A E+ + P FT NFL
Sbjct: 143 SSIRKTLSLMTTNGYPPNQGTTDIAVRSLCSVNRLDDAIELVKGLSLNSFPPDIFTYNFL 202
Query: 1114 TKHLVRTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHD 935
K L + D+M AS G KP++ Y+IL++ +C T+ +L++AM+L+
Sbjct: 203 VKCLCKCRSLTTVYNFVDQMRAS--LGIKPNLVTYTILIDNVCNTK---NLREAMRLVSA 257
Query: 934 MKKAGCQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGD 755
+ +G +PD VY T+M G+ ++ E + VY MK+ G +PD V YNTLI S G
Sbjct: 258 LSDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKMKEEGVEPDLVTYNTLIFGLSKCGR 317
Query: 754 VDLALDLLKAMSYEWHRPDTFSYAPLLGALCRKERALESLSLLKRMIKNGITGNEKSYNQ 575
V A LK M PD +Y L+ +CR+ AL +L+LL+ M G + N +YN
Sbjct: 318 VGEAKKFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGALALLEEMEGKGCSPNSCTYNT 377
Query: 574 VLACLARNNEIDDAMELFELMKDENIGISLTGYNAFVRALCLRKMMNVVNFLFEHVV 404
+L L ++ ++ +EL+ MK+ + + Y VRALC + +F++ V
Sbjct: 378 LLYGLCKSRLMEKGIELYRAMKEGGVKLETAAYATLVRALCRHGKVAEAYEVFDYAV 434
Score = 64.7 bits (156), Expect = 1e-07
Identities = 56/229 (24%), Positives = 96/229 (41%), Gaps = 3/229 (1%)
Frame = -1
Query: 1459 PSFSTHNAVLRNFARSGRVDDCVNMLYFMRGKGEFTANTVTFNVIMT---ELGKIDDITG 1289
P+ T+ ++ N + + + + ++ + G F + +N IM L + ++ G
Sbjct: 230 PNLVTYTILIDNVCNTKNLREAMRLVSALSDSG-FKPDCFVYNTIMKGYCNLSRGGEVIG 288
Query: 1288 IEKLLKVMKRNECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTK 1109
+ MK E D VT + L+ L G+V +A + M P T L
Sbjct: 289 V---YNKMKEEGVEPDLVTYNTLIFGLSKCGRVGEAKKFLKIMVEAGFLPDAVTYTSLMN 345
Query: 1108 HLVRTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMK 929
+ R G A L ++M +G P+ Y+ L+ GLCK+R E K ++L MK
Sbjct: 346 GMCREGDALGALALLEEM---EGKGCSPNSCTYNTLLYGLCKSRLME---KGIELYRAMK 399
Query: 928 KAGCQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTL 782
+ G + + YATL+ + EA V+ ++ D Y TL
Sbjct: 400 EGGVKLETAAYATLVRALCRHGKVAEAYEVFDYAVESKSLTDVAAYTTL 448
>gb|EXC35267.1| hypothetical protein L484_026589 [Morus notabilis]
Length = 444
Score = 185 bits (470), Expect = 5e-44
Identities = 106/375 (28%), Positives = 196/375 (52%), Gaps = 3/375 (0%)
Frame = -1
Query: 1519 RAATIEDAKKLYSMLTPFRIPSFSTHNAVLRNFARSGRVDDCVNML-YFMRGKGEFTANT 1343
++ + AK L++ ++ P + N+ L+++A VDD +++L + ++ F+ +
Sbjct: 44 KSPDLSAAKSLFNSISSTVNPDLNHTNSFLKSYASISTVDDSISLLRHMIKTHPAFSPDR 103
Query: 1342 VTFNVIMTELGKIDD--ITGIEKLLKVMKRNECEADQVTMDVLVRTLCNVGQVEKACEVF 1169
T+++++T D ++ + +L +M D+VT D+ VR LC G+++ A ++F
Sbjct: 104 STYHILLTHSCAAPDPSLSPVHGVLNLMSSAGFSPDKVTADIAVRALCYAGKIDHAVQLF 163
Query: 1168 TEMPTGKNTPKCFTLNFLTKHLVRTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGL 989
EM + P +T NFL K L + E DK S G KPD+ Y+I+++ +
Sbjct: 164 DEMSLRHSVPDSYTYNFLVKCLCKCRPLSTIYEFIDK--TRSSFGLKPDLVTYTIIIDNV 221
Query: 988 CKTRKYEHLKKAMQLLHDMKKAGCQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWK 809
C ++ +L++ +L+ + + G +PD +Y T+M G+ ++ EA+ VY MK+ G +
Sbjct: 222 CNSK---NLREITRLVAVLGEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNKMKENGVE 278
Query: 808 PDKVLYNTLIMIHSNAGDVDLALDLLKAMSYEWHRPDTFSYAPLLGALCRKERALESLSL 629
PD V YNTLI + +G A LK M+ + H PD +Y L+ LCR+ L + +L
Sbjct: 279 PDTVTYNTLIFGLAKSGRAKEARKYLKIMAEKGHSPDVVTYTSLMNGLCRERDVLGAYAL 338
Query: 628 LKRMIKNGITGNEKSYNQVLACLARNNEIDDAMELFELMKDENIGISLTGYNAFVRALCL 449
L+ M + G NE +YN +L + ++ +EL+ +MK+ + + Y VR C
Sbjct: 339 LEEMKERGCEPNECTYNTLLHGFCKAKMVERGVELYRVMKERGMELDTAAYATLVRVFCR 398
Query: 448 RKMMNVVNFLFEHVV 404
R + +F++ V
Sbjct: 399 RGEVAEAYEVFDYAV 413
>ref|XP_006425315.1| hypothetical protein CICLE_v10025555mg [Citrus clementina]
gi|557527305|gb|ESR38555.1| hypothetical protein
CICLE_v10025555mg [Citrus clementina]
Length = 465
Score = 184 bits (466), Expect = 1e-43
Identities = 118/408 (28%), Positives = 210/408 (51%), Gaps = 8/408 (1%)
Frame = -1
Query: 1603 RFLAHYMNHPKPGGA--RSPRELDIIERLERAATIEDAKKLYSMLTP--FRIPSFST-HN 1439
+FL N K A +S ++ + ++ + +A K+++ L + P T HN
Sbjct: 32 QFLNKNENRSKKSAAANKSEKKTPAPAAIFKSPELSEAIKIFNSLVTATMQTPRDRTFHN 91
Query: 1438 AVLRNFARSGRVDDCVNML-YFMRGKGEFTANTVTFNVIMTELGKIDD--ITGIEKLLKV 1268
++L+++A VDD +++L + ++ F + T+++++ + + D + I K L +
Sbjct: 92 SLLQSYASISTVDDSISLLNHMIKANPSFNPDRSTYHILLAQSCQAPDNSFSSIRKTLSL 151
Query: 1267 MKRNECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKHLVRTGR 1088
M N +Q T D+ VR+LC+V +++ A E+ + P FT NFL K L +
Sbjct: 152 MTTNGYPPNQGTTDIAVRSLCSVNRLDDAIELVKGLSLNSFPPDIFTYNFLVKCLCKCRS 211
Query: 1087 FDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKAGCQPD 908
D++ AS G KP++ Y+IL++ +C T+ +L++AM+L+ + +G +PD
Sbjct: 212 LTTVYNFVDQVRASF--GIKPNLVTYTILIDNVCNTK---NLREAMRLVSALSDSGFKPD 266
Query: 907 RMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGDVDLALDLLK 728
VY T+M G+ ++ E + VY MK+ G +PD V YNT+I S G V A LK
Sbjct: 267 CFVYNTIMKGYCNLSRGGEVIGVYNKMKEEGVEPDLVTYNTMIFGLSKCGRVGEAKKFLK 326
Query: 727 AMSYEWHRPDTFSYAPLLGALCRKERALESLSLLKRMIKNGITGNEKSYNQVLACLARNN 548
M PD +Y L+ +CR+ AL +L+LL+ M G + N +YN +L L ++
Sbjct: 327 IMVEAGFLPDAVTYTSLMNGMCREGDALGALALLEEMEGKGCSPNSCTYNTLLYGLCKSR 386
Query: 547 EIDDAMELFELMKDENIGISLTGYNAFVRALCLRKMMNVVNFLFEHVV 404
++ +EL+ MK+ + + Y VRALC + +F++ V
Sbjct: 387 LMEKGIELYRAMKEGGVKLETAAYATLVRALCRHGKVAEAYEVFDYAV 434
Score = 63.9 bits (154), Expect = 2e-07
Identities = 55/229 (24%), Positives = 96/229 (41%), Gaps = 3/229 (1%)
Frame = -1
Query: 1459 PSFSTHNAVLRNFARSGRVDDCVNMLYFMRGKGEFTANTVTFNVIMT---ELGKIDDITG 1289
P+ T+ ++ N + + + + ++ + G F + +N IM L + ++ G
Sbjct: 230 PNLVTYTILIDNVCNTKNLREAMRLVSALSDSG-FKPDCFVYNTIMKGYCNLSRGGEVIG 288
Query: 1288 IEKLLKVMKRNECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTK 1109
+ MK E D VT + ++ L G+V +A + M P T L
Sbjct: 289 V---YNKMKEEGVEPDLVTYNTMIFGLSKCGRVGEAKKFLKIMVEAGFLPDAVTYTSLMN 345
Query: 1108 HLVRTGRFDMACELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMK 929
+ R G A L ++M +G P+ Y+ L+ GLCK+R E K ++L MK
Sbjct: 346 GMCREGDALGALALLEEM---EGKGCSPNSCTYNTLLYGLCKSRLME---KGIELYRAMK 399
Query: 928 KAGCQPDRMVYATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTL 782
+ G + + YATL+ + EA V+ ++ D Y TL
Sbjct: 400 EGGVKLETAAYATLVRALCRHGKVAEAYEVFDYAVESKSLTDVAAYTTL 448
>ref|XP_003595941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484989|gb|AES66192.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 472
Score = 182 bits (461), Expect = 5e-43
Identities = 110/388 (28%), Positives = 205/388 (52%), Gaps = 8/388 (2%)
Frame = -1
Query: 1591 HYMNHPKPGGARSPRELDIIERLERAATIEDAKKLY-SMLTPFRIPSFST-HNAVLRNFA 1418
H ++SP+ + + ++ +++AK ++ S + P S HN++L+++A
Sbjct: 58 HQKQQQSQSQSQSPKPVSVF----KSPNLQEAKSIFNSFVNSSNAPIDSRFHNSLLQSYA 113
Query: 1417 RSGRVDDCVNMLYFM-RGKGEFTANTVTFNVIMTELGKIDD-----ITGIEKLLKVMKRN 1256
++D + L M + F+ + T+++++T K D ++ I + L +M +
Sbjct: 114 SISTINDSIAFLRHMTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSD 173
Query: 1255 ECEADQVTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKHLVRTGRFDMA 1076
D+ T+D+ VR+LC +V+ A E+ E+ + +P ++ NFL K+L ++ +
Sbjct: 174 GISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLV 233
Query: 1075 CELFDKMIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKAGCQPDRMVY 896
P++ Y+IL++ +C T+ +L++A +L+ +++ G +PD +Y
Sbjct: 234 Y---------------PNLVTYTILIDNVCNTK---NLREATRLVDILEEEGFKPDCFLY 275
Query: 895 ATLMNGFAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGDVDLALDLLKAMSY 716
T+M G+ ++ EA+ VY MK+ G +PD + YNTLI S +G V A LL+ M+
Sbjct: 276 NTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAE 335
Query: 715 EWHRPDTFSYAPLLGALCRKERALESLSLLKRMIKNGITGNEKSYNQVLACLARNNEIDD 536
+ H PD +Y L+ +CRK L +L+LL+ M G + N +YN +L L ++ D
Sbjct: 336 KGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDK 395
Query: 535 AMELFELMKDENIGISLTGYNAFVRALC 452
AMEL+ MK + + + + Y FVRALC
Sbjct: 396 AMELYGAMKSDGLKLDMASYATFVRALC 423
>gb|ESW06544.1| hypothetical protein PHAVU_010G056500g [Phaseolus vulgaris]
Length = 462
Score = 181 bits (458), Expect = 1e-42
Identities = 115/382 (30%), Positives = 197/382 (51%), Gaps = 13/382 (3%)
Frame = -1
Query: 1558 RSPRELDIIERLERAATIEDAKKLY-SMLTPFRIPSFSTHNAVLRNFAR-SGRVDDCVNM 1385
+SP+ + + ++ +EDAKK++ S+ + P F N++L ++A+ + D V
Sbjct: 41 QSPKPIPKPNPIFKSPNLEDAKKIFDSIANSSKDPRFP--NSLLHSYAKIAASTTDSVKF 98
Query: 1384 LYFM-RGKGEFTANTVTFNVIMTEL----------GKIDDITGIEKLLKVMKRNECEADQ 1238
L+ + + F+ + TF+++++ I+ I + L M D
Sbjct: 99 LHHITKTLPSFSPDRSTFHILLSHSCANPNSNSNSSSNSAISAIHQTLNSMHAAGVTPDA 158
Query: 1237 VTMDVLVRTLCNVGQVEKACEVFTEMPTGKNTPKCFTLNFLTKHLVRTGRFDMACELFDK 1058
T DV +R LC+ G ++ A E+ E + P +T NFL KHL + + D+
Sbjct: 159 ATADVAIRALCSAGHLDHAIELVNEFASKHCLPDTYTFNFLVKHLCKARALSSVYDFIDE 218
Query: 1057 MIASGSRGFKPDVANYSILMEGLCKTRKYEHLKKAMQLLHDMKKAGCQPDRMVYATLMNG 878
M G KPD+ Y+IL++ +C + +L++AM+L+ + + G +PD VY T+M G
Sbjct: 219 M--REKFGVKPDLVTYTILIDNVCNGK---NLREAMRLVSVLHEEGFKPDCFVYNTIMKG 273
Query: 877 FAKINHTEEALAVYKLMKKAGWKPDKVLYNTLIMIHSNAGDVDLALDLLKAMSYEWHRPD 698
+ ++ EA+ VY MK+ G +PD V YNTLI S +G V A LL+ M+ + + PD
Sbjct: 274 YCVLSRGSEAIEVYNKMKEEGVEPDLVTYNTLIFGLSKSGRVVEAKKLLRVMAEKGYFPD 333
Query: 697 TFSYAPLLGALCRKERALESLSLLKRMIKNGITGNEKSYNQVLACLARNNEIDDAMELFE 518
+Y L+ +CRK L +L+LL M G + NE +YN +L L + ++ A+E +
Sbjct: 334 EVTYTTLMNGMCRKGEVLAALALLGEMEGKGCSPNECTYNTLLHGLCKARLLEKAIEFYG 393
Query: 517 LMKDENIGISLTGYNAFVRALC 452
++K+ + Y FVRALC
Sbjct: 394 VIKEGGLKFDTASYGTFVRALC 415