BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00016543
         (3954 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts...  1427   0.0  
emb|CBI31526.3| unnamed protein product [Vitis vinifera]             1427   0.0  
ref|XP_004237528.1| PREDICTED: regulator of nonsense transcripts...  1410   0.0  
ref|XP_004296960.1| PREDICTED: regulator of nonsense transcripts...  1400   0.0  
gb|EXB30382.1| Regulator of nonsense transcripts 2 [Morus notabi...  1397   0.0  
gb|EOY18504.1| Regulator of nonsense transcripts 2 isoform 1 [Th...  1393   0.0  
ref|XP_003533845.1| PREDICTED: regulator of nonsense transcripts...  1381   0.0  
ref|XP_004488277.1| PREDICTED: regulator of nonsense transcripts...  1377   0.0  
ref|XP_004488276.1| PREDICTED: regulator of nonsense transcripts...  1377   0.0  
ref|XP_001770263.1| predicted protein [Physcomitrella patens] gi...  1367   0.0  
ref|XP_002315268.1| hypothetical protein POPTR_0010s22310g [Popu...  1364   0.0  
ref|XP_002312048.2| hypothetical protein POPTR_0008s04510g [Popu...  1357   0.0  
gb|ABD32424.2| Initiation factor eIF-4 gamma, middle; Up-framesh...  1351   0.0  
ref|XP_002454211.1| hypothetical protein SORBIDRAFT_04g026740 [S...  1340   0.0  
ref|XP_003595517.1| Pentatricopeptide repeat-containing protein ...  1339   0.0  
ref|XP_004953184.1| PREDICTED: regulator of nonsense transcripts...  1330   0.0  
ref|XP_006647557.1| PREDICTED: regulator of nonsense transcripts...  1323   0.0  
ref|XP_003575417.1| PREDICTED: regulator of nonsense transcripts...  1301   0.0  
ref|XP_006293584.1| hypothetical protein CARUB_v10022530mg [Caps...  1283   0.0  
ref|NP_181459.4| RNA binding protein [Arabidopsis thaliana] gi|4...  1276   0.0  

>ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts 2-like [Vitis vinifera]
          Length = 1222

 Score = 1427 bits (3694), Expect = 0.0
 Identities = 749/1156 (64%), Positives = 875/1156 (75%), Gaps = 12/1156 (1%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            KS EAK ALRR NLN ERPD+GFLRTLDSSI+RNTAVIKKLKQINEEQREGL+++L+ VN
Sbjct: 61   KSMEAKMALRRTNLNPERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQREGLMDDLRGVN 120

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAV AIC++KL++SDI AAVQ+CSLLHQRYKDFSP+LIQGLLKVF P K+ D+ 
Sbjct: 121  LSKFVSEAVTAICDAKLKTSDIQAAVQICSLLHQRYKDFSPSLIQGLLKVFFPGKSGDEL 180

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            D DR+ +AM++RSTLKLL+ELY+VGVVED+GIF++I+KDLTS +H KDRDTTQ NLSLL 
Sbjct: 181  DLDRNLKAMKKRSTLKLLLELYFVGVVEDSGIFINIIKDLTSIEHLKDRDTTQTNLSLLA 240

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            SFARQGRIFLGFP++ Q+  EE +K LNIT + KK  RKAF  +YDA+ +LLQ EH+SLR
Sbjct: 241  SFARQGRIFLGFPLSGQEIHEEFFKGLNITADHKKIFRKAFHTYYDAAAELLQAEHTSLR 300

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
            QME ENAK+LN+KGELS+EN ++YEKLRKSY+HL R VSSLAEALDMQPPVMPED +TTR
Sbjct: 301  QMEHENAKILNAKGELSDENVSSYEKLRKSYDHLYRGVSSLAEALDMQPPVMPEDGHTTR 360

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEPKATEQANK 2674
            VTS E+ S   AAK+++ALE++WDD+DT+AFYE LPDLRAFVPAVLLGE EPK  EQ+ K
Sbjct: 361  VTSGEDVSSP-AAKESSALEAVWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKVNEQSAK 419

Query: 2673 VS--------EQHQEQLPXXXXXXXXXXXXTPKEPEV-KTAXXXXXXXXXXXXXXXXXXX 2521
                      E  Q Q              +P+E    +                     
Sbjct: 420  TQEQPTDLAPEADQSQSVNQDAAEISVDSCSPREGRSNEKGKDKEEKEKEKSKDPDKEKG 479

Query: 2520 XXXXXXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNSKSNRKKLV 2341
                            K L+GT++D LLQRLPG VSRDLIDQLTVDFCYLNSKSNRK+LV
Sbjct: 480  KERDADRKGENEKEKLKGLEGTNLDGLLQRLPGCVSRDLIDQLTVDFCYLNSKSNRKRLV 539

Query: 2340 RALFNVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIETKIR 2161
            RALFNVPRTSLELLPYYSRMVATLSTCMKD++SMLLQ+LEEEFNFLINKKDQMNIETKIR
Sbjct: 540  RALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFNFLINKKDQMNIETKIR 599

Query: 2160 NIRFIGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRSPETTTRMT 1981
            NIRF+GEL KF+IAP G VF+CLKACLDDFTHHNIDVACNLLETCGRFL+RSPETT RM 
Sbjct: 600  NIRFLGELCKFRIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMA 659

Query: 1980 NMLEILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRKLLFSDLDK 1801
            NMLEILMRLKNVKNLD RHSTLVENAYYLCKPPE+SARV+KVRPPL QY+RKLLFSDLDK
Sbjct: 660  NMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDK 719

Query: 1800 QSIEHVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQEAFSVAVVD 1621
             SIEHV RQLRKLPWSECEPY+LKCFMKVHRGKY Q+HLIASLT+ LSRY + F+V+VVD
Sbjct: 720  SSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTSGLSRYHDDFAVSVVD 779

Query: 1620 EVLEEIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFFGHGTPEHD 1441
            EVLEEIR+GLE N+YG QQRRIAHMRFLGELYNY  VDSSVIFDTLYL+L FGH T E D
Sbjct: 780  EVLEEIRLGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLILAFGHETAEQD 839

Query: 1440 TLDPVEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIPLDVEFDLQ 1261
             LDP EDCFRIRMVIT L+TCG +FDRGSSKR+LD+FL+ FQRYILSKGA+PLD+EFDLQ
Sbjct: 840  VLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGALPLDIEFDLQ 899

Query: 1260 DLFDDLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKSSGATVLVT 1081
            DLF DLRP M R+                     ++K NS+ KYSDTE   S   +   +
Sbjct: 900  DLFADLRPNMTRYLSIEEVSAALIELEEHERTYTTDKANSE-KYSDTEKPSSRTTSNTSS 958

Query: 1080 GNGKAVVNGTDELGIDYVDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXXXXXXXXXX 901
             NG++  NG +E G  + D   E                   E   ++            
Sbjct: 959  ANGQSPANGVEENGGAHEDVIGESDSDSGSGTIDPEGHDEEEELDEENHDDGCDSEDDED 1018

Query: 900  XXDPMASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLELRTRPTLNMAI 721
                 AS+E+++V VRQK + EVDP+EEADF+REL+A++QESLDSR+LELR RPTLNM I
Sbjct: 1019 DGGGPASDEDDEVHVRQKVA-EVDPQEEADFDRELKALLQESLDSRKLELRARPTLNMMI 1077

Query: 720  PMNIFEGSKE--HSRATEIESGDEVIDDES-GNNSVSVRVLVKRGNKQQAKQLYIPRDCS 550
            PMN+FEGS +  H R  E ESGDE++D+E+ G+  V V+VLVKRGNKQQ KQ++IPRDCS
Sbjct: 1078 PMNVFEGSTKDHHGRGVEGESGDEILDEEAGGSKEVRVKVLVKRGNKQQTKQMFIPRDCS 1137

Query: 549  LVQSSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSGVPSRYHSGRG 370
            LVQS+           QDIKRL+LEYN+REE++ +    Q   W        SR  S   
Sbjct: 1138 LVQSTKQKEAAELEEKQDIKRLILEYNDREEEELNGVGTQTMSWTPSGGSRVSRGSS--- 1194

Query: 369  LWDGYGRSHGGRQRYH 322
             W+G GR+ G R R+H
Sbjct: 1195 -WEG-GRTSGARHRHH 1208


>emb|CBI31526.3| unnamed protein product [Vitis vinifera]
          Length = 1193

 Score = 1427 bits (3694), Expect = 0.0
 Identities = 749/1156 (64%), Positives = 875/1156 (75%), Gaps = 12/1156 (1%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            KS EAK ALRR NLN ERPD+GFLRTLDSSI+RNTAVIKKLKQINEEQREGL+++L+ VN
Sbjct: 32   KSMEAKMALRRTNLNPERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQREGLMDDLRGVN 91

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAV AIC++KL++SDI AAVQ+CSLLHQRYKDFSP+LIQGLLKVF P K+ D+ 
Sbjct: 92   LSKFVSEAVTAICDAKLKTSDIQAAVQICSLLHQRYKDFSPSLIQGLLKVFFPGKSGDEL 151

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            D DR+ +AM++RSTLKLL+ELY+VGVVED+GIF++I+KDLTS +H KDRDTTQ NLSLL 
Sbjct: 152  DLDRNLKAMKKRSTLKLLLELYFVGVVEDSGIFINIIKDLTSIEHLKDRDTTQTNLSLLA 211

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            SFARQGRIFLGFP++ Q+  EE +K LNIT + KK  RKAF  +YDA+ +LLQ EH+SLR
Sbjct: 212  SFARQGRIFLGFPLSGQEIHEEFFKGLNITADHKKIFRKAFHTYYDAAAELLQAEHTSLR 271

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
            QME ENAK+LN+KGELS+EN ++YEKLRKSY+HL R VSSLAEALDMQPPVMPED +TTR
Sbjct: 272  QMEHENAKILNAKGELSDENVSSYEKLRKSYDHLYRGVSSLAEALDMQPPVMPEDGHTTR 331

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEPKATEQANK 2674
            VTS E+ S   AAK+++ALE++WDD+DT+AFYE LPDLRAFVPAVLLGE EPK  EQ+ K
Sbjct: 332  VTSGEDVSSP-AAKESSALEAVWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKVNEQSAK 390

Query: 2673 VS--------EQHQEQLPXXXXXXXXXXXXTPKEPEV-KTAXXXXXXXXXXXXXXXXXXX 2521
                      E  Q Q              +P+E    +                     
Sbjct: 391  TQEQPTDLAPEADQSQSVNQDAAEISVDSCSPREGRSNEKGKDKEEKEKEKSKDPDKEKG 450

Query: 2520 XXXXXXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNSKSNRKKLV 2341
                            K L+GT++D LLQRLPG VSRDLIDQLTVDFCYLNSKSNRK+LV
Sbjct: 451  KERDADRKGENEKEKLKGLEGTNLDGLLQRLPGCVSRDLIDQLTVDFCYLNSKSNRKRLV 510

Query: 2340 RALFNVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIETKIR 2161
            RALFNVPRTSLELLPYYSRMVATLSTCMKD++SMLLQ+LEEEFNFLINKKDQMNIETKIR
Sbjct: 511  RALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFNFLINKKDQMNIETKIR 570

Query: 2160 NIRFIGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRSPETTTRMT 1981
            NIRF+GEL KF+IAP G VF+CLKACLDDFTHHNIDVACNLLETCGRFL+RSPETT RM 
Sbjct: 571  NIRFLGELCKFRIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMA 630

Query: 1980 NMLEILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRKLLFSDLDK 1801
            NMLEILMRLKNVKNLD RHSTLVENAYYLCKPPE+SARV+KVRPPL QY+RKLLFSDLDK
Sbjct: 631  NMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDK 690

Query: 1800 QSIEHVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQEAFSVAVVD 1621
             SIEHV RQLRKLPWSECEPY+LKCFMKVHRGKY Q+HLIASLT+ LSRY + F+V+VVD
Sbjct: 691  SSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTSGLSRYHDDFAVSVVD 750

Query: 1620 EVLEEIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFFGHGTPEHD 1441
            EVLEEIR+GLE N+YG QQRRIAHMRFLGELYNY  VDSSVIFDTLYL+L FGH T E D
Sbjct: 751  EVLEEIRLGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFDTLYLILAFGHETAEQD 810

Query: 1440 TLDPVEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIPLDVEFDLQ 1261
             LDP EDCFRIRMVIT L+TCG +FDRGSSKR+LD+FL+ FQRYILSKGA+PLD+EFDLQ
Sbjct: 811  VLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGALPLDIEFDLQ 870

Query: 1260 DLFDDLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKSSGATVLVT 1081
            DLF DLRP M R+                     ++K NS+ KYSDTE   S   +   +
Sbjct: 871  DLFADLRPNMTRYLSIEEVSAALIELEEHERTYTTDKANSE-KYSDTEKPSSRTTSNTSS 929

Query: 1080 GNGKAVVNGTDELGIDYVDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXXXXXXXXXX 901
             NG++  NG +E G  + D   E                   E   ++            
Sbjct: 930  ANGQSPANGVEENGGAHEDVIGESDSDSGSGTIDPEGHDEEEELDEENHDDGCDSEDDED 989

Query: 900  XXDPMASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLELRTRPTLNMAI 721
                 AS+E+++V VRQK + EVDP+EEADF+REL+A++QESLDSR+LELR RPTLNM I
Sbjct: 990  DGGGPASDEDDEVHVRQKVA-EVDPQEEADFDRELKALLQESLDSRKLELRARPTLNMMI 1048

Query: 720  PMNIFEGSKE--HSRATEIESGDEVIDDES-GNNSVSVRVLVKRGNKQQAKQLYIPRDCS 550
            PMN+FEGS +  H R  E ESGDE++D+E+ G+  V V+VLVKRGNKQQ KQ++IPRDCS
Sbjct: 1049 PMNVFEGSTKDHHGRGVEGESGDEILDEEAGGSKEVRVKVLVKRGNKQQTKQMFIPRDCS 1108

Query: 549  LVQSSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSGVPSRYHSGRG 370
            LVQS+           QDIKRL+LEYN+REE++ +    Q   W        SR  S   
Sbjct: 1109 LVQSTKQKEAAELEEKQDIKRLILEYNDREEEELNGVGTQTMSWTPSGGSRVSRGSS--- 1165

Query: 369  LWDGYGRSHGGRQRYH 322
             W+G GR+ G R R+H
Sbjct: 1166 -WEG-GRTSGARHRHH 1179


>ref|XP_004237528.1| PREDICTED: regulator of nonsense transcripts 2-like [Solanum
            lycopersicum]
          Length = 1188

 Score = 1410 bits (3649), Expect = 0.0
 Identities = 739/1155 (63%), Positives = 869/1155 (75%), Gaps = 10/1155 (0%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            KS EAK ALR+ NLN ERPDTGFLRTLDSSI+RNTAVIKKLKQINEEQREGL+EEL++VN
Sbjct: 32   KSVEAKIALRQNNLNPERPDTGFLRTLDSSIKRNTAVIKKLKQINEEQREGLMEELRSVN 91

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAV AIC++KLR++DI AAV +CSLLHQRYKDFSP+L+QGL+K+F P K  +D 
Sbjct: 92   LSKFVSEAVTAICDAKLRAADIQAAVLICSLLHQRYKDFSPSLVQGLVKIFFPGKAAEDV 151

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            D DR+ RAM++RSTLKLL+ELY+VGVV+D GIF++IVKDLTS +H KDRD TQ NLSLL 
Sbjct: 152  DVDRNARAMKKRSTLKLLLELYFVGVVDDTGIFVNIVKDLTSVEHLKDRDATQTNLSLLA 211

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            SFARQGR  LG  +A QD  EEL+K LN+T +QK+  RK FQ +YDAS +LLQ+EH+SLR
Sbjct: 212  SFARQGRYLLGLQLAGQDILEELFKALNVTTDQKRFFRKVFQTYYDASVELLQSEHASLR 271

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
            QME EN K+L++KGEL+EENA+ YEKLRK+Y+ L R +S LAEALD+QPPVMPED +TTR
Sbjct: 272  QMEHENEKILSAKGELNEENASAYEKLRKAYDQLYRGISGLAEALDLQPPVMPEDGHTTR 331

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEPKATEQANK 2674
            VTS E+ S    +KD+++LE+LWDD+DT+AFYE LPDLRAFVPAVLLGE EPK +EQ  K
Sbjct: 332  VTSGEDASSPGGSKDSSSLEALWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKLSEQLAK 391

Query: 2673 V-------SEQHQEQLPXXXXXXXXXXXXTPKEPEVKTAXXXXXXXXXXXXXXXXXXXXX 2515
            V       +++  + +               K+ E                         
Sbjct: 392  VQDHSITAAQEIADAVAVQEDRNDIGKDKDEKDKEKTKEKSKEKDKDEKDKEPDKEKTRE 451

Query: 2514 XXXXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNSKSNRKKLVRA 2335
                          K ++GT++D+LLQRLPG VSRDLIDQLTV+FCYLNSKS+RKKLVRA
Sbjct: 452  KEAERKGEGDKEKAKGVEGTNLDSLLQRLPGCVSRDLIDQLTVEFCYLNSKSSRKKLVRA 511

Query: 2334 LFNVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIETKIRNI 2155
            LFNVPRTSLELLPYYSRMVATLSTCMKD++SMLLQ+LEEEFNFLINKKDQMNIETKIRNI
Sbjct: 512  LFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFNFLINKKDQMNIETKIRNI 571

Query: 2154 RFIGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRSPETTTRMTNM 1975
            RFIGEL KF+IAPPG VF+CLKACLDDF+HHNIDVACNLLETCGRFL+RSPETT RM NM
Sbjct: 572  RFIGELCKFRIAPPGLVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANM 631

Query: 1974 LEILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRKLLFSDLDKQS 1795
            LEILMRLKNVKNLD RH TLVENAYYLCKPPE+SARV+KVRPPL QY+RKLLFSDLDK S
Sbjct: 632  LEILMRLKNVKNLDPRHITLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSS 691

Query: 1794 IEHVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQEAFSVAVVDEV 1615
            +EHV RQLRKLPWSECE Y+LKCFMKVHRGKY Q+HLIASLTA LSRY + FSVAVVDEV
Sbjct: 692  LEHVLRQLRKLPWSECEAYLLKCFMKVHRGKYGQIHLIASLTACLSRYHDDFSVAVVDEV 751

Query: 1614 LEEIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFFGHGTPEHDTL 1435
            LEEIR+GLE N+YG QQRRIAHMRFLGELYNY LVDSSVIFDTLYL+L FGHGT E D L
Sbjct: 752  LEEIRVGLELNDYGMQQRRIAHMRFLGELYNYELVDSSVIFDTLYLILVFGHGTSEQDVL 811

Query: 1434 DPVEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIPLDVEFDLQDL 1255
            DP EDCFRIRMVIT L+TCG +FDRGSSKR+LD+FL+ FQRYIL+KG +PLD+EFDLQDL
Sbjct: 812  DPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILNKGVLPLDIEFDLQDL 871

Query: 1254 FDDLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKSSGATVLVTGN 1075
            F +LRP M R+                   V SEK N++ K+S+TE + S   T  ++ N
Sbjct: 872  FAELRPNMTRYASIEEVNAALVDLEEHERIVTSEKANNE-KHSETEKIPSR-TTSGMSVN 929

Query: 1074 GKAVVNGTDELGI--DYVDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXXXXXXXXXX 901
            G+++ NG +E G+  + V+TES+                       D             
Sbjct: 930  GQSLSNGIEENGLHEEVVETESDSENGTIEHVAHDDDEETDDWNRDDRCDTEDESDEGDG 989

Query: 900  XXDPMASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLELRTRPTLNMAI 721
                  S+EE+ V VR K + EVDP EEA+FERELRA+MQESLDSR+LELR RPTLNM I
Sbjct: 990  P----GSDEEDKVHVRSKVA-EVDPLEEAEFERELRALMQESLDSRKLELRGRPTLNMTI 1044

Query: 720  PMNIFEGSKEHSRATEIESGDEVIDDES-GNNSVSVRVLVKRGNKQQAKQLYIPRDCSLV 544
            PMN+FEG  +  R  E ESGDE +D+ + G+  V V+VLVKRGNKQQ K++ IPRDCSL+
Sbjct: 1045 PMNVFEGPTKDHRGVEGESGDETLDEATGGSKEVPVKVLVKRGNKQQTKKMLIPRDCSLI 1104

Query: 543  QSSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSGVPSRYHSGRGLW 364
            QS+           QDIKRLVLEYN+REE++ +    QP  W T +SG  SR       W
Sbjct: 1105 QSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQPSSW-TQSSG--SRVAHRGSTW 1161

Query: 363  DGYGRSHGGRQRYHH 319
            D  GR  G R RY H
Sbjct: 1162 DAPGRGSGSRHRYLH 1176


>ref|XP_004296960.1| PREDICTED: regulator of nonsense transcripts 2-like [Fragaria vesca
            subsp. vesca]
          Length = 1197

 Score = 1400 bits (3624), Expect = 0.0
 Identities = 735/1158 (63%), Positives = 878/1158 (75%), Gaps = 14/1158 (1%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            KS E+K ALR++NLN ERPD+GFLRTLDSSI+RNTAVIKKLKQINEEQREGL+++L++VN
Sbjct: 42   KSIESKMALRQSNLNPERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQREGLMDDLRSVN 101

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAV AIC++KLRSSDI AAVQ+CSLLHQRYKDFSP L+QGLLKVF P K+ DD 
Sbjct: 102  LSKFVSEAVTAICDAKLRSSDIQAAVQICSLLHQRYKDFSPTLVQGLLKVFFPGKSGDDP 161

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            D DRS RAM++RSTLKLL+EL++VGV+ED GIF++++KDLTS DH KDR+TTQ NL+LL 
Sbjct: 162  DADRSLRAMKKRSTLKLLLELFFVGVIEDGGIFVNVIKDLTSGDHLKDRETTQTNLTLLA 221

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            SFARQGR+FLG P++  +  EE +K LNIT +QKK  +KAFQ +Y+A+ +LLQ+EH+SLR
Sbjct: 222  SFARQGRMFLGLPLSGPEIYEEFFKGLNITPDQKKFFKKAFQTYYEAAAELLQSEHNSLR 281

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
            QME ENA+++N+KGELS+++A++YEKLRKSY+HL R+VS+LAEALDMQPPVMPED +TTR
Sbjct: 282  QMEHENARIINAKGELSDDSASSYEKLRKSYDHLYRNVSTLAEALDMQPPVMPEDGHTTR 341

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEPKATEQANK 2674
            VTS E+ S   A KD++ALE++WDD+DT+AFYE LPDLRAFVPAVLLGE E K  EQ+ K
Sbjct: 342  VTSGEDASSPAAGKDSSALEAIWDDEDTRAFYECLPDLRAFVPAVLLGEAESKVNEQSAK 401

Query: 2673 VSEQHQEQLPXXXXXXXXXXXXTPKEP--------EVKTAXXXXXXXXXXXXXXXXXXXX 2518
              EQ  E  P               EP        E K                      
Sbjct: 402  TQEQPTE--PAAESDQNQQATEEAAEPSAEVGALQEGKIREKGKDKEEKEKEKDKSKDAD 459

Query: 2517 XXXXXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNSKSNRKKLVR 2338
                           K ++GT++D LLQRLPG VSRDLIDQLTV+FCYLNSK+NRKKLVR
Sbjct: 460  KEKGDRKGENEKEKLKSIEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVR 519

Query: 2337 ALFNVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIETKIRN 2158
            A+FNVPRTSLELLPYYSRMVATLSTCMKD++SMLL MLEEEFNFLINKKDQMNIETKIRN
Sbjct: 520  AVFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLAMLEEEFNFLINKKDQMNIETKIRN 579

Query: 2157 IRFIGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRSPETTTRMTN 1978
            IRFIGEL KF+IAP G VF+CLKACLDDF+HHNIDVACNLLETCGRFL+RSPETT RM N
Sbjct: 580  IRFIGELCKFRIAPAGLVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTVRMAN 639

Query: 1977 MLEILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRKLLFSDLDKQ 1798
            MLEILMRLKNVKNLD RHSTLVENAYYLCKPPE+SARVAKVRPPL QY+RKLLFSDLDK 
Sbjct: 640  MLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKS 699

Query: 1797 SIEHVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQEAFSVAVVDE 1618
            ++EHV RQLRKLPW ECEPY+LKCF+KVH+GKY Q+HLIASLTA LSRY + F+V+VVDE
Sbjct: 700  TLEHVLRQLRKLPWGECEPYLLKCFLKVHKGKYGQIHLIASLTAGLSRYHDEFAVSVVDE 759

Query: 1617 VLEEIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFFGHGTPEHDT 1438
            VLEEIR+GLE NEYG QQRRIAHMRFLGELYNY  VDSSVIF+TLYL+L FGHGT E D 
Sbjct: 760  VLEEIRLGLELNEYGMQQRRIAHMRFLGELYNYEHVDSSVIFETLYLILIFGHGTTEQDA 819

Query: 1437 LDPVEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIPLDVEFDLQD 1258
            LDP EDCFR+RMVIT L+TCG +FDRGSSKR+LD+FL+ FQRYILSKG +PLDVEFDLQD
Sbjct: 820  LDPPEDCFRMRMVITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGVLPLDVEFDLQD 879

Query: 1257 LFDDLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKSSGATV--LV 1084
            LF +LRP M R+                   V ++K N++ K+SDTE  KSS  T     
Sbjct: 880  LFAELRPNMTRYSSLEEVNAALVELEEHERTVSTDKANNE-KHSDTE--KSSRRTTPNKT 936

Query: 1083 TGNGKAVVNGTDELGI---DYVDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXXXXXX 913
            T NG++VVNGT+E G+   D+ D++S+                       +H        
Sbjct: 937  TVNGQSVVNGTEENGVVHEDHRDSDSDSGSGTVDPDRHEEELDEE-----NHDDGSESED 991

Query: 912  XXXXXXDPMASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLELRTRPTL 733
                   P AS+E+++V VRQK + EVDP+EEADFE +L+A+MQES++ RR ELR RPTL
Sbjct: 992  DDDDGGGP-ASDEDDEVHVRQKVA-EVDPQEEADFELDLKAVMQESMEQRRQELRGRPTL 1049

Query: 732  NMAIPMNIFEGS-KEHSRATEIESGDEVIDDESGNNSVSVRVLVKRGNKQQAKQLYIPRD 556
            NM IPMN+FEGS K+H      +SGD+  ++  G+  V V+VLVKRGNKQQ KQ+ IPRD
Sbjct: 1050 NMMIPMNLFEGSIKDHHGRVGGDSGDDGDEESGGSKEVQVKVLVKRGNKQQTKQMSIPRD 1109

Query: 555  CSLVQSSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSGVPSRYHSG 376
            CSLVQS+           QDIKRLVLEYN+REE++ +    Q  ++    SG  +R+   
Sbjct: 1110 CSLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQTLNY--AQSG-GNRFGGR 1166

Query: 375  RGLWDGYGRSHGGRQRYH 322
             G W+G     GG +RYH
Sbjct: 1167 GGTWEGTS-GRGGPRRYH 1183


>gb|EXB30382.1| Regulator of nonsense transcripts 2 [Morus notabilis]
          Length = 1191

 Score = 1397 bits (3617), Expect = 0.0
 Identities = 731/1160 (63%), Positives = 877/1160 (75%), Gaps = 15/1160 (1%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            KS EAK  LR++NLN ERPD+GFLRTLDSSI+RNTAVIKKLKQINEEQREGLL+EL++VN
Sbjct: 33   KSIEAKMVLRQSNLNAERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQREGLLDELRSVN 92

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAV +IC++KLR+SDI AAVQ+CSLLHQRYKDFSP+LIQGLLKVF P K+ DD 
Sbjct: 93   LSKFVSEAVTSICDAKLRTSDIQAAVQICSLLHQRYKDFSPSLIQGLLKVFFPGKSGDDS 152

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            DT+R+ +AM++RSTLKLL+ELY+VGV+ED+GIF++I+KDLTST+H KDRDTTQ NL+LL 
Sbjct: 153  DTERNLKAMKKRSTLKLLLELYFVGVIEDSGIFVNIIKDLTSTEHLKDRDTTQTNLTLLA 212

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            SF+RQGRIFLG  ++ Q+  EEL+K LNIT +QKK  RKA   +YDA+ +LLQ+EH+SLR
Sbjct: 213  SFSRQGRIFLGLLLSGQEIYEELFKGLNITADQKKLFRKALYSYYDAAVELLQSEHASLR 272

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
            Q+E ENAK+LN+KGELS+ENA +YEKLRKSY++  R+++SLAEALD QPPVMPED +TTR
Sbjct: 273  QLEHENAKILNAKGELSDENATSYEKLRKSYDNFYRNITSLAEALDTQPPVMPEDGHTTR 332

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEP-------K 2695
            VTS E+ S   A KD++ +E+LWDD+DT+AFYE LPDLRAFVPAVLLGE E        K
Sbjct: 333  VTSGEDTSSTAAGKDSSVVEALWDDEDTRAFYECLPDLRAFVPAVLLGETESKLNEQSVK 392

Query: 2694 ATEQANKVSEQHQE--QLPXXXXXXXXXXXXTPKEPEVKTAXXXXXXXXXXXXXXXXXXX 2521
              EQ  + + +  +  Q                +   ++                     
Sbjct: 393  TQEQPTEPAPESDQGQQATQDTGEVSTDSGVLQEGKSIEKGKEKEEKDREKSKDPEKEKG 452

Query: 2520 XXXXXXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNSKSNRKKLV 2341
                            K L+GT+++ LLQRLPG VSRDLIDQLTV+FCYLNSK+NRKKLV
Sbjct: 453  KEKDTDRKGETEKEKLKSLEGTNLEALLQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLV 512

Query: 2340 RALFNVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIETKIR 2161
            RALFNVPRTSLELLPYYSRMVATLSTCMKD+ASMLLQMLEEEFNFLINKKDQMNIETKIR
Sbjct: 513  RALFNVPRTSLELLPYYSRMVATLSTCMKDVASMLLQMLEEEFNFLINKKDQMNIETKIR 572

Query: 2160 NIRFIGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRSPETTTRMT 1981
            NIRFIGEL KFKIAP G VF+CLKACLDDFTHHNIDVACNLLETCGRFL+RSPETT RM 
Sbjct: 573  NIRFIGELCKFKIAPSGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMA 632

Query: 1980 NMLEILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRKLLFSDLDK 1801
            NMLEILMRLKNVKNLD RHSTLVENAYYLCKPPE+SAR+AKVRPPL QY+RKLLFSDLDK
Sbjct: 633  NMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARIAKVRPPLHQYIRKLLFSDLDK 692

Query: 1800 QSIEHVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQEAFSVAVVD 1621
             +IEHV RQLRKLPWS+CEPY+LKCFMKVH+GKY Q+HLIASLTA LSRY + F+VAVVD
Sbjct: 693  STIEHVLRQLRKLPWSDCEPYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDDFAVAVVD 752

Query: 1620 EVLEEIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFFGHGTPEHD 1441
            EVLEEIR+GLE N+YG QQRRIAHMRFLGELYNY  VDSSVIF+TL+L+L FGHG+PE D
Sbjct: 753  EVLEEIRLGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFETLHLILVFGHGSPEQD 812

Query: 1440 TLDPVEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIPLDVEFDLQ 1261
             LDP EDCFR+RMVIT L+TCG +FDRGSSKR+LD+FLV FQRY+LSKGA+PLD+EFDLQ
Sbjct: 813  LLDPPEDCFRMRMVITLLETCGHYFDRGSSKRKLDRFLVHFQRYVLSKGALPLDIEFDLQ 872

Query: 1260 DLFDDLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKSSGATVLVT 1081
            DLF DLRP M R+                   + +EKT+S+ K+SDTE   S  +   ++
Sbjct: 873  DLFADLRPNMSRYSSIEEVNAALVELEEHEHTISTEKTSSE-KHSDTEKASSRSSPNPIS 931

Query: 1080 GNGKAVVNGTDELG---IDYVDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXXXXXXX 910
             NG++VVNG +E G    D  D++S+                       +H         
Sbjct: 932  ANGQSVVNGNEEYGGVHNDLADSDSDSGSDTIDPEGQDEEELDEE----NHDDERDSDED 987

Query: 909  XXXXXDPMASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLELRTRPTLN 730
                    AS+E+++V VRQ K +EVDP+EEA F++ELRA   ES++ RR +LR RPTLN
Sbjct: 988  DDDDGVAPASDEDDEVHVRQ-KMVEVDPQEEASFDQELRA---ESMEQRRQDLRGRPTLN 1043

Query: 729  MAIPMNIFEG-SKEHSRATEIESGDEVIDDESG-NNSVSVRVLVKRGNKQQAKQLYIPRD 556
            M IPMN+FEG SK+H R    ESGDE +D+E+G +  + V+VLVKRGNKQQ KQ++IPRD
Sbjct: 1044 MMIPMNVFEGSSKDHGRGIGGESGDEALDEEAGLHKEIQVKVLVKRGNKQQTKQMFIPRD 1103

Query: 555  CSLVQSSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSGVPSRYHSG 376
            CSL+QS+           QDIKRLVLEYN+REE+     T    H    NS + SR H  
Sbjct: 1104 CSLIQSTKQKEAAELEEKQDIKRLVLEYNDREEELNGLGTQTLNHVQGGNSRILSRGH-- 1161

Query: 375  RGLWDG-YGRSHGGRQRYHH 319
              +W+G  G++ G R R+H+
Sbjct: 1162 --VWEGTSGKAAGPRHRHHN 1179


>gb|EOY18504.1| Regulator of nonsense transcripts 2 isoform 1 [Theobroma cacao]
            gi|508726608|gb|EOY18505.1| Regulator of nonsense
            transcripts 2 isoform 1 [Theobroma cacao]
          Length = 1193

 Score = 1393 bits (3605), Expect = 0.0
 Identities = 737/1168 (63%), Positives = 873/1168 (74%), Gaps = 24/1168 (2%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            KS E K ALR++NLN ERPD+GFLRTLDSSIRRNTAVIKKLKQINEEQ+EGL+EEL++VN
Sbjct: 32   KSIEGKMALRQSNLNPERPDSGFLRTLDSSIRRNTAVIKKLKQINEEQKEGLMEELRSVN 91

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAV AIC++KL+SSDI AAVQ+CSLL+QRYKDFSP+LIQGLLKVF P K+ DD 
Sbjct: 92   LSKFVSEAVTAICDAKLKSSDIQAAVQICSLLNQRYKDFSPSLIQGLLKVFFPGKSGDDL 151

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            D DR+ +AM++RSTLKLL+ELY+VGV+ED GIF++I+KDLTST+H KDRD TQ NL+LL 
Sbjct: 152  DADRNLKAMKKRSTLKLLLELYFVGVIEDNGIFINIIKDLTSTEHLKDRDATQTNLTLLA 211

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            SFARQGR+FLG PI+ Q+  EE +K LNIT +QKKT RKAF  +YDA T+LLQ+EH++LR
Sbjct: 212  SFARQGRVFLGLPISGQEILEEFFKGLNITADQKKTFRKAFHAYYDAVTELLQSEHATLR 271

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
            QME ENAK+LN+KGEL+EENA++YEKLRKSY+HL R+VSSLAEALDMQ PVMPEDS+TTR
Sbjct: 272  QMEHENAKILNAKGELNEENASSYEKLRKSYDHLYRNVSSLAEALDMQSPVMPEDSHTTR 331

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLG------------ 2710
            VT+ E+ S     K+++ LE++WDDDDT+AFYE LPDLRAFVPAVLLG            
Sbjct: 332  VTTGEDASSPATGKESSTLEAIWDDDDTRAFYECLPDLRAFVPAVLLGEAEPKGIEQTSK 391

Query: 2709 ---EPEPKATE--QANKVSEQHQEQLPXXXXXXXXXXXXTPKEPEVKTAXXXXXXXXXXX 2545
               +P   +TE  Q+  V++   E                 K+ E K             
Sbjct: 392  AQEQPTDSSTEADQSTAVAQDAVEASADSGNLQEGKSIEKGKDKEEKDKERNKDPDKEKG 451

Query: 2544 XXXXXXXXXXXXXXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNS 2365
                                      L+GT++D LLQRLPG VSRDLIDQLTV+FCYLNS
Sbjct: 452  KEKDSDKKGENEKEKLKG--------LEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNS 503

Query: 2364 KSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQ 2185
            KSNRK+LVR LFNVPRTSLELLPYYSRMVATLSTCMKD+ SMLLQMLEEEFNFLINKKDQ
Sbjct: 504  KSNRKRLVRTLFNVPRTSLELLPYYSRMVATLSTCMKDVPSMLLQMLEEEFNFLINKKDQ 563

Query: 2184 MNIETKIRNIRFIGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRS 2005
            MNIETKIRNIRFIGEL KF+IAP G VF+CLK CLDDFTHHNIDVACNLLETCGRFL+RS
Sbjct: 564  MNIETKIRNIRFIGELCKFRIAPAGLVFSCLKTCLDDFTHHNIDVACNLLETCGRFLYRS 623

Query: 2004 PETTTRMTNMLEILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRK 1825
            PETT RM NMLEILMRLKNVKNLD RHSTLVENAYYLCKPPE+SARV+KVRPPL QY+RK
Sbjct: 624  PETTIRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRK 683

Query: 1824 LLFSDLDKQSIEHVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQE 1645
            LLF+DLDK SIEHV RQLRKLPWSECE Y+LKCFMKVH+GKY Q+HLIASLTA LSRY +
Sbjct: 684  LLFTDLDKSSIEHVLRQLRKLPWSECESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHD 743

Query: 1644 AFSVAVVDEVLEEIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFF 1465
             F+VAVVDEVLEEIR+GLE N+YG QQRRIAHMRFLGELYNY  VDSSVIF+TLYL+L  
Sbjct: 744  EFAVAVVDEVLEEIRLGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFETLYLILVS 803

Query: 1464 GHGTPEHDTLDPVEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIP 1285
            GH T E D LDP EDCFRIRMVIT LQTCG +FDRGSSKR+LD+FL+ FQRYILSKGA+P
Sbjct: 804  GHDTAEQDVLDPPEDCFRIRMVITLLQTCGHYFDRGSSKRKLDRFLIHFQRYILSKGALP 863

Query: 1284 LDVEFDLQDLFDDLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKS 1105
            LD+EFDLQDLF +LRP M R+                     ++KT+S+ K+SDTE   S
Sbjct: 864  LDIEFDLQDLFAELRPNMTRYSSMEEVNAALVELEEHERTASTDKTSSE-KHSDTEKPSS 922

Query: 1104 SGATVLVTGNGKAVVNGTDELGIDYVDTESELXXXXXXXXXXXXXXXXXXEKYVD---HX 934
                  ++G+  ++ NG++E G        E                   E Y+D   H 
Sbjct: 923  RTTAHSISGDRPSIFNGSEENG----GVHEETGDSDSESGSGTIEPEGHDEDYLDEENHD 978

Query: 933  XXXXXXXXXXXXXDPMASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLE 754
                          P AS+E+++V VRQK + E+DP+E A+F++ELRA++QES++ R+LE
Sbjct: 979  DGCDTDEEDEDDGGP-ASDEDDEVHVRQKVA-ELDPQEVANFDQELRAVVQESMEQRKLE 1036

Query: 753  LRTRPTLNMAIPMNIFEGSKE--HSRATEIESGDEVIDDES-GNNSVSVRVLVKRGNKQQ 583
            LR RPTLNM IPMN+FEGS +  H R    ESGDE +D+E+ G+  V V+VLVKRGNKQQ
Sbjct: 1037 LRGRPTLNMMIPMNVFEGSTKDHHGRVVGGESGDEALDEEAGGSREVQVKVLVKRGNKQQ 1096

Query: 582  AKQLYIPRDCSLVQSSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNS 403
             KQ+YIPRDC+LVQS+           QDIKRLVLEYN+R E++ +    Q  +WP+ NS
Sbjct: 1097 TKQMYIPRDCTLVQSTKQKEAAEFEEKQDIKRLVLEYNDRVEEENNGLGTQTLNWPSGNS 1156

Query: 402  GVPSRYHSGRGLWDG-YGRSHGGRQRYH 322
             V  R +S    W+G  GRS G R R+H
Sbjct: 1157 RVYGRGNS----WEGSSGRSGGPRHRHH 1180


>ref|XP_003533845.1| PREDICTED: regulator of nonsense transcripts UPF2 [Glycine max]
          Length = 1188

 Score = 1381 bits (3575), Expect = 0.0
 Identities = 723/1160 (62%), Positives = 871/1160 (75%), Gaps = 15/1160 (1%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            KS EAK ALR++NLN ERPD+GFLRTLDSSI+RNTAVIKKLKQINEEQRE L++EL++VN
Sbjct: 26   KSIEAKLALRQSNLNPERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQREALMDELRSVN 85

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAVAAIC++KLRSSDI AAVQ+CSLLHQRYKDF+P+L+QGLLKVFSP K  D+ 
Sbjct: 86   LSKFVSEAVAAICDAKLRSSDIQAAVQICSLLHQRYKDFAPSLVQGLLKVFSPGKPGDES 145

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            DTDR+ +AM++RS+LKLL+EL++VGV+ED GIF++I+KDLTS +  KDRD  Q +L+LL 
Sbjct: 146  DTDRNLKAMKKRSSLKLLLELFFVGVIEDGGIFINIIKDLTSGEQLKDRDAAQTSLTLLS 205

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            SFARQGRIFLG  ++  +  EE +K LNIT +QKK LRKA   FYDA+ +LLQ+EHSSLR
Sbjct: 206  SFARQGRIFLGLSVSGPEIHEEFFKGLNITADQKKVLRKACYSFYDAAAELLQSEHSSLR 265

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
             ME EN+K+LN+KGELS+EN  +YEKLRKSY+HL R++SSLAEALDMQPPVMPED +TTR
Sbjct: 266  LMEHENSKILNAKGELSDENIASYEKLRKSYDHLYRNISSLAEALDMQPPVMPEDGHTTR 325

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEPKATEQANK 2674
            VTS E+G  + + KD++ +E +WDD+D + FYE LPDLRAFVPAVLLGE EPK++EQ   
Sbjct: 326  VTSGEDGISSASGKDSSVVEPIWDDEDARTFYECLPDLRAFVPAVLLGETEPKSSEQ--- 382

Query: 2673 VSEQHQEQLPXXXXXXXXXXXXTPKEPEVKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2494
             S ++Q+Q              T +  EV T                             
Sbjct: 383  -SAKNQDQTTEILPESDKGQQTTHESGEVSTESSALPEAESTERVKDKEEKDKSKELDRE 441

Query: 2493 XXXXXXXK-----------CLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNSKSNRKK 2347
                                ++GT++D LLQRLPG VSRDLIDQLTV+FCYLNSKS+RKK
Sbjct: 442  KEKEKENDKKGENEKDKLRSVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSSRKK 501

Query: 2346 LVRALFNVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIETK 2167
            LVRALFNVPRTSLELLPYYSRMVATLSTCMKD++S+LLQMLEEEFNFLINKKDQMNIETK
Sbjct: 502  LVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSILLQMLEEEFNFLINKKDQMNIETK 561

Query: 2166 IRNIRFIGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRSPETTTR 1987
            IRNIRFIGEL KFKI+PPG VF+CLKACLDDFTHHNIDVACNLLETCGRFL+RSPETT R
Sbjct: 562  IRNIRFIGELCKFKISPPGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTIR 621

Query: 1986 MTNMLEILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRKLLFSDL 1807
            M NMLEILMRLKNVKNLD RHSTLVENAYYLCKPPE+SARVAKVRPPL QY+RKLLFSDL
Sbjct: 622  MANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDL 681

Query: 1806 DKQSIEHVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQEAFSVAV 1627
            DK +IEHV RQLRKLPW+ECEPY+LKCFMKV++GKY Q+HLIASL A LSRY + F+VA+
Sbjct: 682  DKSTIEHVLRQLRKLPWNECEPYLLKCFMKVYKGKYGQIHLIASLAAGLSRYHDEFAVAI 741

Query: 1626 VDEVLEEIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFFGHGTPE 1447
            VDEVLEEIR+GLE N+YG QQRRIA+MRFLGELYNY  VDSSVIF+TLYL+L +GHGT E
Sbjct: 742  VDEVLEEIRVGLELNDYGMQQRRIAYMRFLGELYNYEHVDSSVIFETLYLILIYGHGTQE 801

Query: 1446 HDTLDPVEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIPLDVEFD 1267
             D LDP EDCFRIR++IT L+TCG +FDRGSSKR+LD+FL+ FQRYILSKGA+PLD+EFD
Sbjct: 802  QDVLDPPEDCFRIRLIITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGALPLDIEFD 861

Query: 1266 LQDLFDDLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTE-GVKSSGATV 1090
            LQDLF DLRP MVR                    V ++K +S+ K+SDTE  +  + +T 
Sbjct: 862  LQDLFVDLRPNMVRHNSIEEVNAALVELEEHDRIVFADKASSE-KHSDTEKSLSRTTSTT 920

Query: 1089 LVTGNGKAVVNGTDELGIDYVDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXXXXXXX 910
             V GNG+++ NG +E G+   D +SE                   E+  D          
Sbjct: 921  TVVGNGQSIDNGMEENGVQD-DNDSETDSGSDTIDVEGHDDEELDEENHDDGCETEDDDD 979

Query: 909  XXXXXDPMASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLELRTRPTLN 730
                    AS+EE++V VRQK + +VDP EEA+F++EL+A++QES++ RR ELR RPTLN
Sbjct: 980  DDDDGPGPASDEEDEVHVRQKMT-QVDPLEEANFDQELKAVVQESMEQRRQELRGRPTLN 1038

Query: 729  MAIPMNIFEGSKE--HSRATEIESGDEVIDDESGNNS-VSVRVLVKRGNKQQAKQLYIPR 559
            M IPMN+FEGS +  H R    ESGDE +D+++G N  V VRVLVKRGNKQQ KQ++IPR
Sbjct: 1039 MMIPMNVFEGSAKDHHGRGVGGESGDEPLDEDTGGNKEVQVRVLVKRGNKQQTKQMFIPR 1098

Query: 558  DCSLVQSSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSGVPSRYHS 379
            + SLVQS+           +DIKRLVLEYN+REE++ +    Q  +W  + S        
Sbjct: 1099 NSSLVQSTKQKEAAELQEKEDIKRLVLEYNDREEEELNGLGTQATNW--MQSVGYKGGGR 1156

Query: 378  GRGLWDGYGRSHGGRQRYHH 319
            G  L    GR  G R R+H+
Sbjct: 1157 GSSLEGNSGRGSGSRHRHHN 1176


>ref|XP_004488277.1| PREDICTED: regulator of nonsense transcripts UPF2-like isoform X2
            [Cicer arietinum]
          Length = 1198

 Score = 1377 bits (3563), Expect = 0.0
 Identities = 721/1155 (62%), Positives = 859/1155 (74%), Gaps = 10/1155 (0%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            KS EAK ALR++NLN +RPD+GF RTLDSSI+RNTAVIKKLKQINEEQRE L+++L++VN
Sbjct: 38   KSIEAKMALRQSNLNPDRPDSGFFRTLDSSIKRNTAVIKKLKQINEEQRESLMDDLRSVN 97

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAVA+ICE+KLRSSDI AAVQ+CSLLHQRYKDF P LIQGLLKVFSP K+ D+ 
Sbjct: 98   LSKFVSEAVASICEAKLRSSDIQAAVQICSLLHQRYKDFVPTLIQGLLKVFSPGKSGDES 157

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            ++DR+ +AM++RS+LKLL+EL++VGV+ED GIF++I+KDLTS +  KDR+ TQ +L+LL 
Sbjct: 158  ESDRNLKAMKKRSSLKLLLELFFVGVIEDGGIFINIIKDLTSVEQLKDREATQTSLTLLS 217

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            SFARQGRIFLG  +   +  EE  K LNIT +QKK LRKA   FYDA+ +LLQ+EHSSLR
Sbjct: 218  SFARQGRIFLGLSVTGPEIHEEFLKGLNITADQKKVLRKACYSFYDAAAELLQSEHSSLR 277

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
             ME EN+K+LN+KGELS+EN ++YEKLRKSY+HL R+VSSLAEALDMQPPVMPED +TTR
Sbjct: 278  LMEHENSKILNAKGELSDENLSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDGHTTR 337

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEPKATEQANK 2674
            VTS EE   + A KD++ +E +WDD+DT+AFYE LPDLRAFVPAVLLGE EPK  EQ+ K
Sbjct: 338  VTSGEEAISSTAGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLLGETEPKVNEQSVK 397

Query: 2673 VSEQHQEQLPXXXXXXXXXXXXTPKEPEVK-------TAXXXXXXXXXXXXXXXXXXXXX 2515
              +Q  E LP                 E         T                      
Sbjct: 398  GQDQATEVLPESDKGQLVTLESGEASTESSVLTEGESTENVNDKEEKEKSKELDREKEKE 457

Query: 2514 XXXXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNSKSNRKKLVRA 2335
                          + L+GT++D LLQRLPG VSRDLIDQLTV+FCYLNSKSNRKKLVRA
Sbjct: 458  KENDKKGENEKEKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRA 517

Query: 2334 LFNVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIETKIRNI 2155
            LF+VPRTSLELLPYYSRMVATLSTCMKD++S+LLQMLEEEFNFLINKKDQMNIETKIRNI
Sbjct: 518  LFSVPRTSLELLPYYSRMVATLSTCMKDVSSLLLQMLEEEFNFLINKKDQMNIETKIRNI 577

Query: 2154 RFIGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRSPETTTRMTNM 1975
            RFIGEL KFKIAP G VF+CLKACLDDFTHHNIDVACNLLETCGRFL+RSPETT RM NM
Sbjct: 578  RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMGNM 637

Query: 1974 LEILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRKLLFSDLDKQS 1795
            LEILMRLKNVKNLD RHSTLVENAYYLCKPPE+SARVAKVRPPL QY+RKLLFSDLDK +
Sbjct: 638  LEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKST 697

Query: 1794 IEHVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQEAFSVAVVDEV 1615
            IEHV RQLRKLPWS+CE Y+LKCFMKVH+GKY Q+HLIASL A LSRY + F+VA+VDEV
Sbjct: 698  IEHVLRQLRKLPWSDCEWYLLKCFMKVHKGKYGQIHLIASLAAGLSRYHDEFAVAIVDEV 757

Query: 1614 LEEIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFFGHGTPEHDTL 1435
            LEEIRIGLE NEYG QQRR+A+MRFLGELYNY+  DSSVIF+TLYL+L FGHGTPE D L
Sbjct: 758  LEEIRIGLELNEYGMQQRRVANMRFLGELYNYKHADSSVIFETLYLILIFGHGTPEQDAL 817

Query: 1434 DPVEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIPLDVEFDLQDL 1255
            DP ED FR+R++IT L+TCG +FD GSSK++LD+FL+ FQRYILSKGA+PLDVEFDLQDL
Sbjct: 818  DPPEDFFRMRLIITLLETCGHYFDHGSSKKKLDRFLIHFQRYILSKGALPLDVEFDLQDL 877

Query: 1254 FDDLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKSSGATVLVTGN 1075
            F DLRP MVR+                   V ++K +S+ K+SDTE   S   +    GN
Sbjct: 878  FADLRPSMVRYASVDEVNAALVELEEHDRIVSTDKASSE-KHSDTEKPLSRTTSTTTVGN 936

Query: 1074 GKAVVNGTDELGIDYVDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXXXXXXXXXXXX 895
             +   NG +E G+   D  ++                       +H              
Sbjct: 937  RQNNDNGAEENGVQ--DDVNDGEHDSGSDVIDEEGHDDEELDEENHDDGCGSEDDEEDDD 994

Query: 894  DPMASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLELRTRPTLNMAIPM 715
             P AS++E++V VRQK + EVDP EEADF++EL+A++QES++ RR ELR RPTLNM IPM
Sbjct: 995  VP-ASDDEDEVHVRQKVT-EVDPLEEADFDQELKAVVQESMEQRRQELRGRPTLNMMIPM 1052

Query: 714  NIFEGSKE--HSRATEIESGDEVIDDESG-NNSVSVRVLVKRGNKQQAKQLYIPRDCSLV 544
            NIFEGS +  H R    ESGDE +D+++G N  V V+VLVKRGNKQQ KQ+YIP + SLV
Sbjct: 1053 NIFEGSAKDHHGRGNGGESGDEALDEDTGVNKEVQVKVLVKRGNKQQTKQMYIPGNSSLV 1112

Query: 543  QSSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSGVPSRYHSGRGLW 364
            QS+           +DIKRL+LEYN+REE++ +    QP +W  + SG       G G  
Sbjct: 1113 QSTKQKEAAELQEKEDIKRLILEYNDREEEELNGLGTQPTNW--IQSGGNKVGGRGNGFE 1170

Query: 363  DGYGRSHGGRQRYHH 319
               GR  G R R+H+
Sbjct: 1171 GTSGRGGGSRHRHHN 1185


>ref|XP_004488276.1| PREDICTED: regulator of nonsense transcripts UPF2-like isoform X1
            [Cicer arietinum]
          Length = 1199

 Score = 1377 bits (3563), Expect = 0.0
 Identities = 721/1155 (62%), Positives = 859/1155 (74%), Gaps = 10/1155 (0%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            KS EAK ALR++NLN +RPD+GF RTLDSSI+RNTAVIKKLKQINEEQRE L+++L++VN
Sbjct: 39   KSIEAKMALRQSNLNPDRPDSGFFRTLDSSIKRNTAVIKKLKQINEEQRESLMDDLRSVN 98

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAVA+ICE+KLRSSDI AAVQ+CSLLHQRYKDF P LIQGLLKVFSP K+ D+ 
Sbjct: 99   LSKFVSEAVASICEAKLRSSDIQAAVQICSLLHQRYKDFVPTLIQGLLKVFSPGKSGDES 158

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            ++DR+ +AM++RS+LKLL+EL++VGV+ED GIF++I+KDLTS +  KDR+ TQ +L+LL 
Sbjct: 159  ESDRNLKAMKKRSSLKLLLELFFVGVIEDGGIFINIIKDLTSVEQLKDREATQTSLTLLS 218

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            SFARQGRIFLG  +   +  EE  K LNIT +QKK LRKA   FYDA+ +LLQ+EHSSLR
Sbjct: 219  SFARQGRIFLGLSVTGPEIHEEFLKGLNITADQKKVLRKACYSFYDAAAELLQSEHSSLR 278

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
             ME EN+K+LN+KGELS+EN ++YEKLRKSY+HL R+VSSLAEALDMQPPVMPED +TTR
Sbjct: 279  LMEHENSKILNAKGELSDENLSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDGHTTR 338

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEPKATEQANK 2674
            VTS EE   + A KD++ +E +WDD+DT+AFYE LPDLRAFVPAVLLGE EPK  EQ+ K
Sbjct: 339  VTSGEEAISSTAGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLLGETEPKVNEQSVK 398

Query: 2673 VSEQHQEQLPXXXXXXXXXXXXTPKEPEVK-------TAXXXXXXXXXXXXXXXXXXXXX 2515
              +Q  E LP                 E         T                      
Sbjct: 399  GQDQATEVLPESDKGQLVTLESGEASTESSVLTEGESTENVNDKEEKEKSKELDREKEKE 458

Query: 2514 XXXXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNSKSNRKKLVRA 2335
                          + L+GT++D LLQRLPG VSRDLIDQLTV+FCYLNSKSNRKKLVRA
Sbjct: 459  KENDKKGENEKEKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRA 518

Query: 2334 LFNVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIETKIRNI 2155
            LF+VPRTSLELLPYYSRMVATLSTCMKD++S+LLQMLEEEFNFLINKKDQMNIETKIRNI
Sbjct: 519  LFSVPRTSLELLPYYSRMVATLSTCMKDVSSLLLQMLEEEFNFLINKKDQMNIETKIRNI 578

Query: 2154 RFIGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRSPETTTRMTNM 1975
            RFIGEL KFKIAP G VF+CLKACLDDFTHHNIDVACNLLETCGRFL+RSPETT RM NM
Sbjct: 579  RFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMGNM 638

Query: 1974 LEILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRKLLFSDLDKQS 1795
            LEILMRLKNVKNLD RHSTLVENAYYLCKPPE+SARVAKVRPPL QY+RKLLFSDLDK +
Sbjct: 639  LEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKST 698

Query: 1794 IEHVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQEAFSVAVVDEV 1615
            IEHV RQLRKLPWS+CE Y+LKCFMKVH+GKY Q+HLIASL A LSRY + F+VA+VDEV
Sbjct: 699  IEHVLRQLRKLPWSDCEWYLLKCFMKVHKGKYGQIHLIASLAAGLSRYHDEFAVAIVDEV 758

Query: 1614 LEEIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFFGHGTPEHDTL 1435
            LEEIRIGLE NEYG QQRR+A+MRFLGELYNY+  DSSVIF+TLYL+L FGHGTPE D L
Sbjct: 759  LEEIRIGLELNEYGMQQRRVANMRFLGELYNYKHADSSVIFETLYLILIFGHGTPEQDAL 818

Query: 1434 DPVEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIPLDVEFDLQDL 1255
            DP ED FR+R++IT L+TCG +FD GSSK++LD+FL+ FQRYILSKGA+PLDVEFDLQDL
Sbjct: 819  DPPEDFFRMRLIITLLETCGHYFDHGSSKKKLDRFLIHFQRYILSKGALPLDVEFDLQDL 878

Query: 1254 FDDLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKSSGATVLVTGN 1075
            F DLRP MVR+                   V ++K +S+ K+SDTE   S   +    GN
Sbjct: 879  FADLRPSMVRYASVDEVNAALVELEEHDRIVSTDKASSE-KHSDTEKPLSRTTSTTTVGN 937

Query: 1074 GKAVVNGTDELGIDYVDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXXXXXXXXXXXX 895
             +   NG +E G+   D  ++                       +H              
Sbjct: 938  RQNNDNGAEENGVQ--DDVNDGEHDSGSDVIDEEGHDDEELDEENHDDGCGSEDDEEDDD 995

Query: 894  DPMASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLELRTRPTLNMAIPM 715
             P AS++E++V VRQK + EVDP EEADF++EL+A++QES++ RR ELR RPTLNM IPM
Sbjct: 996  VP-ASDDEDEVHVRQKVT-EVDPLEEADFDQELKAVVQESMEQRRQELRGRPTLNMMIPM 1053

Query: 714  NIFEGSKE--HSRATEIESGDEVIDDESG-NNSVSVRVLVKRGNKQQAKQLYIPRDCSLV 544
            NIFEGS +  H R    ESGDE +D+++G N  V V+VLVKRGNKQQ KQ+YIP + SLV
Sbjct: 1054 NIFEGSAKDHHGRGNGGESGDEALDEDTGVNKEVQVKVLVKRGNKQQTKQMYIPGNSSLV 1113

Query: 543  QSSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSGVPSRYHSGRGLW 364
            QS+           +DIKRL+LEYN+REE++ +    QP +W  + SG       G G  
Sbjct: 1114 QSTKQKEAAELQEKEDIKRLILEYNDREEEELNGLGTQPTNW--IQSGGNKVGGRGNGFE 1171

Query: 363  DGYGRSHGGRQRYHH 319
               GR  G R R+H+
Sbjct: 1172 GTSGRGGGSRHRHHN 1186


>ref|XP_001770263.1| predicted protein [Physcomitrella patens] gi|162678480|gb|EDQ64938.1|
            predicted protein [Physcomitrella patens]
          Length = 1158

 Score = 1367 bits (3537), Expect = 0.0
 Identities = 727/1158 (62%), Positives = 864/1158 (74%), Gaps = 16/1158 (1%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            KS+EAK+ LR+ANL  ERPD  F +TLDSSI+RNTAVIKKLKQINEEQ+EGLLEEL+ VN
Sbjct: 8    KSAEAKHLLRQANLAPERPDASFFKTLDSSIKRNTAVIKKLKQINEEQKEGLLEELRVVN 67

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAV AI ++KL+SSDINAAVQVCSLLHQRYKDF+P L+ GLLKVF P+K  D+ 
Sbjct: 68   LSKFVSEAVTAITDAKLKSSDINAAVQVCSLLHQRYKDFAPTLLAGLLKVFFPAK-GDEI 126

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            D DRS+RAM++RSTL+LLMELY+ GV ED  +F+SI+KDL  ++H +DR+ TQ NLSLLV
Sbjct: 127  DGDRSSRAMKKRSTLRLLMELYFCGVFEDGSMFISIIKDLAGSEHLRDREATQTNLSLLV 186

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            SFARQGR  LG P+  QD Q+ELYK+L+++ +QKK LRK FQ F DA  +LLQTEH +LR
Sbjct: 187  SFARQGRGLLGLPLNGQDGQDELYKELSMSNDQKKLLRKMFQSFLDAVVELLQTEHGALR 246

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
            Q+EQENA+MLN+KGELSEENA  YEKLRKSYEHL R++SSLAEA+DMQPPVMPED +TTR
Sbjct: 247  QLEQENARMLNAKGELSEENATAYEKLRKSYEHLFRNISSLAEAIDMQPPVMPEDGHTTR 306

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEPKATEQANK 2674
            VTS ++G      K+  + E +WDD+DT++FYE+LPDLRAFVPAVLLGE EPK   +A  
Sbjct: 307  VTSGDDGPSQATGKEPASPEPIWDDEDTRSFYENLPDLRAFVPAVLLGEAEPKGVAEA-- 364

Query: 2673 VSEQHQEQLPXXXXXXXXXXXXTPKEPEVKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2494
             S +  EQ+              P  P+ K++                            
Sbjct: 365  -SSKAAEQVVDVLETEPQVSETVPTAPDDKSSFSVSEKAKDKDKDDKDRNRDVEKDKTKE 423

Query: 2493 XXXXXXXKC-----------LDGTSIDTLLQRLPGSVSRDLIDQLTV-DFCYLNSKSNRK 2350
                   K            ++G S+D+LLQRLPG VSRDLIDQLTV DFCYLNSKS+RK
Sbjct: 424  KDKESEKKADKESEKEKVKGVEGASLDSLLQRLPGCVSRDLIDQLTVVDFCYLNSKSSRK 483

Query: 2349 KLVRALFNVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIET 2170
            KLVR LFNVPR+SLEL+PYYSRM+ATLSTCMKD+A M+LQ+LEEEFNFL+NKKDQMNIET
Sbjct: 484  KLVRTLFNVPRSSLELIPYYSRMIATLSTCMKDVAPMILQLLEEEFNFLMNKKDQMNIET 543

Query: 2169 KIRNIRFIGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRSPETTT 1990
            KIRNIRF+GELAKFK+A PG +F+CLK+CLDDFTHHNIDVACNLLETCGRFL+R PET+ 
Sbjct: 544  KIRNIRFLGELAKFKVASPGLIFSCLKSCLDDFTHHNIDVACNLLETCGRFLYRFPETSL 603

Query: 1989 RMTNMLEILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRKLLFSD 1810
            RM NMLEI+MRLKNVKNLDARHSTLVENAYY CKPPE+SARV+KVRPPL QY+RKLLF+D
Sbjct: 604  RMGNMLEIIMRLKNVKNLDARHSTLVENAYYQCKPPERSARVSKVRPPLHQYIRKLLFAD 663

Query: 1809 LDKQSIEHVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQEAFSVA 1630
            LDK +IE V RQLRKLPWSECE Y+LKCFMKV++GKYSQVHLIASLTA LSRY +AF+V+
Sbjct: 664  LDKTTIERVLRQLRKLPWSECETYLLKCFMKVYKGKYSQVHLIASLTAGLSRYHDAFAVS 723

Query: 1629 VVDEVLEEIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFFGHGTP 1450
            VVDEVLE IR+GLE NEYG QQRRIA+MRFLGELY+YRL+DS VIFDTLYL++FFGHGT 
Sbjct: 724  VVDEVLEAIRVGLELNEYGMQQRRIAYMRFLGELYSYRLIDSPVIFDTLYLIIFFGHGTS 783

Query: 1449 EHDTLDPVEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIPLDVEF 1270
            E D LDP EDCFR+RMVIT L+TCGQFFDRGSSKRRLD+FL++FQRY+LSKG IPLDVEF
Sbjct: 784  EQDVLDPPEDCFRLRMVITLLETCGQFFDRGSSKRRLDRFLLYFQRYVLSKGVIPLDVEF 843

Query: 1269 DLQDLFDDLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKSSGATV 1090
            DLQDLF DLRPKMVR+                  H  +   N   +Y   +  ++ GA  
Sbjct: 844  DLQDLFADLRPKMVRY-ATYDEANQALLELEEVDHGEAHVNNPGSEY--VKDAQNIGAAP 900

Query: 1089 LVTGNGKAVVNGTDELGI-DYVDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXXXXXX 913
            L T       +G    G+ D  D+ESE                   +KY DH        
Sbjct: 901  LGTR-----ASGIHGAGLADDADSESETESGSMEADGQEEEEELEEDKYPDH---DDEVE 952

Query: 912  XXXXXXDPMASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLELRTRPTL 733
                  D   SEEEE V+V QKK  E DP EEA+F+RE RA+MQES+DSR+LE+R+RPTL
Sbjct: 953  EMEGGADTAGSEEEEKVKVMQKKMPETDPAEEAEFDREYRALMQESIDSRKLEMRSRPTL 1012

Query: 732  NMAIPMNIFEGSKEHSRA--TEIESGDEVIDDESGNNSVSVRVLVKRGNKQQAKQLYIPR 559
            NM IP+N+F+ SK+H R+  T+IESGDEV+DD++   SV  RVLVK+GNKQQ KQL IPR
Sbjct: 1013 NMTIPLNLFD-SKDHGRSGGTDIESGDEVVDDQTSGTSVQFRVLVKKGNKQQTKQLRIPR 1071

Query: 558  DCSLVQSSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSGVPSRYHS 379
            +CSLVQS+           QDIKRLVLEYNER+E+D + A  QP +W T + G P     
Sbjct: 1072 ECSLVQSTKQKEAAELEEKQDIKRLVLEYNERDEEDRAGAAPQPMNWAT-HQGAPG-LGR 1129

Query: 378  GRGLW-DGYGRSHGGRQR 328
            GRG W +G GR    RQR
Sbjct: 1130 GRGHWGEGGGRLGNARQR 1147


>ref|XP_002315268.1| hypothetical protein POPTR_0010s22310g [Populus trichocarpa]
            gi|222864308|gb|EEF01439.1| hypothetical protein
            POPTR_0010s22310g [Populus trichocarpa]
          Length = 1194

 Score = 1364 bits (3531), Expect = 0.0
 Identities = 722/1164 (62%), Positives = 854/1164 (73%), Gaps = 19/1164 (1%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            KS EAK ALR++NLN ERPD+GFLRTLDSSI+RNTAVIKKLKQINEEQ+EGL+EEL+ VN
Sbjct: 32   KSIEAKVALRQSNLNPERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQKEGLMEELRNVN 91

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAV +IC++KLR+SDI AAVQ+CSLLHQRYKDFSP+L+QGLLKVF P K+ +D 
Sbjct: 92   LSKFVSEAVTSICDAKLRTSDIQAAVQICSLLHQRYKDFSPSLVQGLLKVFFPVKSGEDL 151

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            D D++++AM++RSTLKLL+EL++VGV ED+ +F++I+KDLTS +H KDRDTTQ NL+LL 
Sbjct: 152  DVDKNSKAMKKRSTLKLLLELFFVGVTEDSSVFINIIKDLTSAEHLKDRDTTQTNLTLLA 211

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            SFARQGR+FLG P++ Q+  EE +K LNIT +QKK  RKAF  +YDA  +LLQ++H+SLR
Sbjct: 212  SFARQGRVFLGLPLSGQEIHEEFFKGLNITTDQKKIFRKAFHAYYDAVAELLQSDHASLR 271

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
            QME ENAK+LN+KGELS+EN ++YEKLRKSY+HL R+VSSLAEAL MQPPVMPED +TTR
Sbjct: 272  QMEHENAKILNAKGELSDENVSSYEKLRKSYDHLYRNVSSLAEALHMQPPVMPEDGHTTR 331

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEPKATEQANK 2674
            +TS E+ S   A KD++ LE+LWDD+DT+AFYE LPDLRAFVPAVLLGE EPKA + + K
Sbjct: 332  LTSGEDISSPAAGKDSSVLEALWDDEDTRAFYECLPDLRAFVPAVLLGEVEPKANDHSVK 391

Query: 2673 VS--------EQHQEQLPXXXXXXXXXXXXTPKEPEVKTAXXXXXXXXXXXXXXXXXXXX 2518
                      E  Q Q                +    +                      
Sbjct: 392  TQDQQSELAPESDQGQSTQDMAEVTAESGTLQEGKSTEKGKDKEEKDKEKVKDPEKEKGK 451

Query: 2517 XXXXXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNSKSNRKKLVR 2338
                           K L+GT++D LLQRLPG VSRDLIDQLTV+FCY NSKSNRKKLVR
Sbjct: 452  EKDAERKGENEKEKLKSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYFNSKSNRKKLVR 511

Query: 2337 ALFNVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIETKIRN 2158
            ALFNVPRTSLELLPYYSRMVATLSTCMKD++ MLLQ+LEEEFNFLINKKDQMNIETKIRN
Sbjct: 512  ALFNVPRTSLELLPYYSRMVATLSTCMKDVSFMLLQLLEEEFNFLINKKDQMNIETKIRN 571

Query: 2157 IRFIGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRSPETTTRMTN 1978
            IRFIGEL KF+IAP   VF+CLKACLDDFTHHNIDVACNLLETCGRFL+RSPETT RM N
Sbjct: 572  IRFIGELCKFRIAPASTVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMAN 631

Query: 1977 MLEILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRKLLFSDLDKQ 1798
            MLEILMRLKNVKNLD RHSTLVENAYYLCKPPE+SARV+KVRPPL QY+RKLLFSDLDK 
Sbjct: 632  MLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLYQYIRKLLFSDLDKS 691

Query: 1797 SIEHVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQEAFSVAVVDE 1618
            SIEHV RQLRKLPWSECE Y+LKCFMKVH+GKY Q+HLIASLTA LSRY + F+V+VVDE
Sbjct: 692  SIEHVLRQLRKLPWSECEAYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVSVVDE 751

Query: 1617 VLEEIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFFGHGTPEHDT 1438
            VLEEIR+GLE N+YG QQRRIAHMRFLGELYNY  VDSSVIF+TL L+L FGH TPE D 
Sbjct: 752  VLEEIRLGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFETLNLILVFGHDTPEQDV 811

Query: 1437 LDPVEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIPLDVEFDLQD 1258
            LDP EDCFRIRMVI  L+TCG +FDRGSSKR+LD+FL+ FQRYILSKGA+PLDVEFDLQD
Sbjct: 812  LDPPEDCFRIRMVIILLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGALPLDVEFDLQD 871

Query: 1257 LFDDLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKSSGATVLVTG 1078
            LF +LRP M+R+                   V ++K NS+ K+SD +   S   + +++ 
Sbjct: 872  LFVELRPNMIRYTSIEEVNAALIEHEENERIVSTDKANSE-KHSDIDKRLSRTTSSIIST 930

Query: 1077 NGKAVVNGTDELGIDYV---DTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXXXXXXXX 907
            NG+   NG +E G+  +   DT+S                        +H          
Sbjct: 931  NGQRTTNGNEENGLHDIGGSDTDS------GSGTIDQDGHDEEELDEENHDDRCDTEDED 984

Query: 906  XXXXDPMASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQES-----LDSRRLELRTR 742
                 P AS+E+++V VRQK + E DP E A FE+ELRA+MQ       ++ RR ELR R
Sbjct: 985  DGGGGP-ASDEDDEVHVRQKFA-EADPHEVASFEQELRAVMQARYKLLLMEQRRQELRGR 1042

Query: 741  PTLNMAIPMNIFEG--SKEHSRATEIESGDEVIDDESGNNSVSVRVLVKRGNKQQAKQLY 568
            P LNM IPMN+FEG     H R    ESGDE  +   GN  V V+VLVKRGNKQQ KQ+Y
Sbjct: 1043 PALNMVIPMNLFEGPPRDHHGRGVGGESGDE-DEGAGGNKDVQVKVLVKRGNKQQTKQMY 1101

Query: 567  IPRDCSLVQSSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSGVPSR 388
            IPRDCSLVQS+           +DIKRLVLEYN+REE++ +    Q  +W     G  SR
Sbjct: 1102 IPRDCSLVQSTKQKEAAEFEEKRDIKRLVLEYNDREEEENNGLGNQTLNW---MPGGTSR 1158

Query: 387  YHSGRGLWDG-YGRSHGGRQRYHH 319
              S    W+G  GR  G R  Y+H
Sbjct: 1159 VTSRSSTWEGSRGRGAGSRYGYYH 1182


>ref|XP_002312048.2| hypothetical protein POPTR_0008s04510g [Populus trichocarpa]
            gi|550332418|gb|EEE89415.2| hypothetical protein
            POPTR_0008s04510g [Populus trichocarpa]
          Length = 1171

 Score = 1357 bits (3512), Expect = 0.0
 Identities = 723/1161 (62%), Positives = 849/1161 (73%), Gaps = 16/1161 (1%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            KS EAK ALR++NLN ERPD+GFLRTLDSSI+RNTAVIKKLKQINEEQ+EGL+EEL+ VN
Sbjct: 32   KSIEAKVALRQSNLNPERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQKEGLMEELRNVN 91

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAV +IC++KLR+SDI AAVQ+CSLLHQRYKDFSP+L+QGLLKVF P K+ +D 
Sbjct: 92   LSKFVSEAVTSICDAKLRTSDIQAAVQICSLLHQRYKDFSPSLVQGLLKVFFPGKSGEDL 151

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            D D++++AM++RS+LKLL+ELY+VGV ED+ IF++I+KDLTS ++ KDRDTTQ NL+LL 
Sbjct: 152  DVDKNSKAMKKRSSLKLLLELYFVGVTEDSSIFINIIKDLTSIENLKDRDTTQTNLTLLA 211

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            SFARQGR+FLG P++ Q+ QEE  K L+IT +QKK  RKAF  +YD   +LL++EH+SLR
Sbjct: 212  SFARQGRVFLGLPLSGQETQEEFLKGLSITTDQKKIFRKAFHTYYDVVAELLKSEHASLR 271

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
            QME ENAKMLN+KGELS++N ++YEKLRKSY+ L R+VSSLAEALDMQPPVMPED +TTR
Sbjct: 272  QMEHENAKMLNAKGELSDDNVSSYEKLRKSYDQLYRNVSSLAEALDMQPPVMPEDGHTTR 331

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEPKATEQANK 2674
            VTS E+ S   A KD + LE+LWDD+DT+AFYE LPDLRAFVPAVLLGE EPKA E + K
Sbjct: 332  VTSGEDASSPAAGKDTSLLEALWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKANEHSAK 391

Query: 2673 VS--------EQHQEQLPXXXXXXXXXXXXTPKEPEVKTAXXXXXXXXXXXXXXXXXXXX 2518
                      E  Q Q                +    +                      
Sbjct: 392  TQDQPSELAPESDQGQPTQDMAEVSAESGPLQEGKSTEKGKDKEEKDKEKVKDSEKEKGK 451

Query: 2517 XXXXXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNSKSNRKKLVR 2338
                           K L+GT++D LLQRLPG VSRDLIDQLTVDFCYLNSKS+RKKLVR
Sbjct: 452  EKDAERKGENEKEKLKSLEGTNLDALLQRLPGCVSRDLIDQLTVDFCYLNSKSSRKKLVR 511

Query: 2337 ALFNVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIETKIRN 2158
            ALFNVPRTSLELLPYYSRMVATLSTCMKD++SMLLQ+LEEEFNFLINKKDQMNIETKIRN
Sbjct: 512  ALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFNFLINKKDQMNIETKIRN 571

Query: 2157 IRFIGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRSPETTTRMTN 1978
            IRFIGEL KF+IAP   VF+CLKACLDDFTHHNIDVACNLLETCGRFL+R+PETT RM N
Sbjct: 572  IRFIGELCKFRIAPASTVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRTPETTVRMAN 631

Query: 1977 MLEILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRKLLFSDLDKQ 1798
            MLEILMRLKNVKNLD RHSTLVENAYYLCKPPE+SARV+KVRPPL QY+RKLLFSDLDK 
Sbjct: 632  MLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLYQYIRKLLFSDLDKS 691

Query: 1797 SIEHVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQEAFSVAVVDE 1618
            SIEHV RQLRKLPWSECE Y+LKCFMKVH+GKY Q+HLIASLTA LSRY + F+VAVVDE
Sbjct: 692  SIEHVLRQLRKLPWSECEAYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDE 751

Query: 1617 VLEEIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFFGHGTPEHDT 1438
            VLEEIR+GLE N+YG QQRRIAHMRFLGELYNY  VDSSVIF+TLY +L FGH TPE D 
Sbjct: 752  VLEEIRLGLELNDYGMQQRRIAHMRFLGELYNYEHVDSSVIFETLYWILMFGHDTPEQDV 811

Query: 1437 LDPVEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIPLDVEFDLQD 1258
            LDP EDCFRIRMVIT L TCG +FDRGSSKR+L++FL+ FQRYILSKG +PLDVEFDLQD
Sbjct: 812  LDPPEDCFRIRMVITLLDTCGHYFDRGSSKRKLNRFLMHFQRYILSKGLLPLDVEFDLQD 871

Query: 1257 LFDDLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKSSGATVLVTG 1078
            LF +LRP M+R+                   V ++K NS+ K+SDT+       +  ++ 
Sbjct: 872  LFAELRPNMIRYSSIEEVNAALIELEENEQTVSTDKFNSE-KHSDTDKPLCRTTSSTISA 930

Query: 1077 NGKAVVNGTDELG----IDYVDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXXXXXXX 910
            NG++++NG +E G    I   DT+S                    +  VD          
Sbjct: 931  NGQSILNGNEENGSHEDIGGSDTDSGSGTIDQDGHDEEELDDENHDGGVDTEDEDDDGDG 990

Query: 909  XXXXXDPMASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLELRTRPTLN 730
                    ASEEE++V VRQK                   + +ES++ RR ELR RP LN
Sbjct: 991  P-------ASEEEDEVHVRQK-------------------VAEESMEQRRQELRGRPALN 1024

Query: 729  MAIPMNIFEGSKE--HSRATEIESGDEVIDDES-GNNSVSVRVLVKRGNKQQAKQLYIPR 559
            M IPMN+FEGS +  H RA   ESGDE  D+E+ GN  V V+VLVKRGNKQQ KQLYIPR
Sbjct: 1025 MVIPMNLFEGSAKDHHGRAVGGESGDE--DEEAGGNKDVQVKVLVKRGNKQQTKQLYIPR 1082

Query: 558  DCSLVQSSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSGVPSRYHS 379
            DCSLVQS+           QDIKRLVLEYN+REE++ +    Q  +W T   G  SR   
Sbjct: 1083 DCSLVQSTKQKEAAEFEEKQDIKRLVLEYNDREEEENNGLGTQTLNWMT---GGTSRVTG 1139

Query: 378  GRGLWDG-YGRSHGGRQRYHH 319
                W+G  GR  G R R+HH
Sbjct: 1140 RGSTWEGSSGRGTGSRYRHHH 1160


>gb|ABD32424.2| Initiation factor eIF-4 gamma, middle; Up-frameshift suppressor 2
            [Medicago truncatula]
          Length = 1212

 Score = 1351 bits (3496), Expect = 0.0
 Identities = 715/1175 (60%), Positives = 858/1175 (73%), Gaps = 30/1175 (2%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            KS EAK ALR+ NLN ERPDTGF RTLDSSI+RNTAVIKKLKQINEEQRE L+++L++VN
Sbjct: 32   KSIEAKMALRQTNLNPERPDTGFFRTLDSSIKRNTAVIKKLKQINEEQRESLMDDLRSVN 91

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAVAAICE+KLRSSDI AAVQ+CSLLHQRYKDF P LIQGLLKVFSP K+ D+ 
Sbjct: 92   LSKFVSEAVAAICEAKLRSSDIQAAVQICSLLHQRYKDFVPTLIQGLLKVFSPGKSGDET 151

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            D+D++ +AM++RS+LKLL+EL++VGV+ED GIF+SI+KDLTS +  KDR+ TQ +L+LL 
Sbjct: 152  DSDKNLKAMKKRSSLKLLLELFFVGVIEDGGIFISIIKDLTSVEQLKDREATQTSLTLLS 211

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            SFARQGRIFLG  +   +  EE  K LNIT +QKK +RKA   FYD + +LLQ+EHSSLR
Sbjct: 212  SFARQGRIFLGLSVTGPEIHEEFMKGLNITADQKKVIRKACYSFYDTAAELLQSEHSSLR 271

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
             ME EN+K+LN+KGELSEEN ++YEKLRKSY+HL R+VSSLAEALDMQPPVMPED +TTR
Sbjct: 272  LMEHENSKILNAKGELSEENLSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDGHTTR 331

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEP-------K 2695
            VTS EE   + A KD++ +E +WDD+DT+AFYE LPDLRAFVPAVLLGE EP       K
Sbjct: 332  VTSGEEAVSSAAGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLLGETEPKVNEQSVK 391

Query: 2694 ATEQANKV-SEQHQEQL-PXXXXXXXXXXXXTPKEPEVKTAXXXXXXXXXXXXXXXXXXX 2521
              +Q+ ++  E  + QL               P+    +                     
Sbjct: 392  GQDQSTEILPESDKSQLVTLDSGEVSTESSVLPEGESSEIVNDKEEKEKSKELDRDKEKE 451

Query: 2520 XXXXXXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNSKSNRKKLV 2341
                            + L+GT++D LLQRLPG VSRDLIDQLTV+FCYLNSKSNRKKLV
Sbjct: 452  KEKEGEKKGEHEKEKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLV 511

Query: 2340 RALFNVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIETKIR 2161
            RALF+VPRTSLELL YYSRMVATLSTCMKD++S+LLQMLEEEFNFLINKKDQMNIETKIR
Sbjct: 512  RALFSVPRTSLELLAYYSRMVATLSTCMKDVSSLLLQMLEEEFNFLINKKDQMNIETKIR 571

Query: 2160 NIRFIGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRSPETTTRMT 1981
            NIRFIGEL KFKIAP G VF+CLKACLDDF+HHNIDVACNLLETCGRFL+RSPET+ RM 
Sbjct: 572  NIRFIGELCKFKIAPAGLVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETSIRMG 631

Query: 1980 NMLEILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRKLLFSDLDK 1801
            NMLEILMRLKNVKNLD RHSTLVENAYYLCKPPE+SARVAKVRPPL QY+RKLLFSDLDK
Sbjct: 632  NMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDK 691

Query: 1800 QSIEHVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQEAFSVAVVD 1621
             +IEHV RQLRKLPWS+CE Y+LKCFMKVH+GKY Q+HL+ASL A LSRY + F+VA+VD
Sbjct: 692  TTIEHVLRQLRKLPWSDCELYLLKCFMKVHKGKYGQIHLVASLAAGLSRYHDEFAVAIVD 751

Query: 1620 EVLEEIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFFGHGTPEHD 1441
            EVLEEIRIGLE N+YG QQRR+A+MRFLGELYNY+  DSSVIF+TLYL++ FGHGTPE D
Sbjct: 752  EVLEEIRIGLELNDYGMQQRRVANMRFLGELYNYKHADSSVIFETLYLIIVFGHGTPEQD 811

Query: 1440 TLDPVEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIPLDVEFDLQ 1261
             LDP ED FRIR++IT L+TCG +FD GSSK++LD+FL+ FQRYILSKGA+PLDVEFDLQ
Sbjct: 812  VLDPPEDFFRIRLIITLLETCGHYFDHGSSKKKLDRFLMHFQRYILSKGALPLDVEFDLQ 871

Query: 1260 DLFDDLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKSSGATVLVT 1081
            DLF DLRP MVR+                   V ++K +S+ K+S T+   S   +  + 
Sbjct: 872  DLFADLRPSMVRYTSVDEVNAALVELEEHDRIVSTDKASSE-KHSHTDKPLSRSTSTTMV 930

Query: 1080 GNGKAVVNGTDELGIDYVDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXXXXXXXXXX 901
             NG+   NG +E G+   D  +E                       +H            
Sbjct: 931  SNGQNNDNGIEENGVQ--DNVNEGEHDSGSDVIDAEGHDDEELDEENHDDGGETEDDDED 988

Query: 900  XXDPMASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQ------------------ES 775
               P AS++E++V VRQK + EVDP EEADF++EL+A++Q                  ES
Sbjct: 989  EDGP-ASDDEDEVHVRQKVT-EVDPLEEADFDQELKAVVQARDYLFIMMGQRCSDVTDES 1046

Query: 774  LDSRRLELRTRPTLNMAIPMNIFEGSKE--HSRATEIESGDEVIDDESG-NNSVSVRVLV 604
            ++ RRLELR RPTLNM IPMN+FEGS +  H R T  ESGDE +D+++G +  V V+VLV
Sbjct: 1047 MEQRRLELRGRPTLNMMIPMNVFEGSAKDHHGRGTGGESGDEALDEDTGVSKEVQVKVLV 1106

Query: 603  KRGNKQQAKQLYIPRDCSLVQSSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPP 424
            KRGNKQQ KQ+YIP D SLVQS+           +DIKRL+LEYN+REE++ +    QP 
Sbjct: 1107 KRGNKQQTKQMYIPSDSSLVQSTKQKEAAELQEKEDIKRLILEYNDREEEELNGLGAQPS 1166

Query: 423  HWPTVNSGVPSRYHSGRGLWDGYGRSHGGRQRYHH 319
            +W  + SG       G       GR  G R R+HH
Sbjct: 1167 NW--MQSGGNRVGGRGNSFEGTSGRGGGSRHRHHH 1199


>ref|XP_002454211.1| hypothetical protein SORBIDRAFT_04g026740 [Sorghum bicolor]
            gi|241934042|gb|EES07187.1| hypothetical protein
            SORBIDRAFT_04g026740 [Sorghum bicolor]
          Length = 1193

 Score = 1340 bits (3469), Expect = 0.0
 Identities = 699/1153 (60%), Positives = 853/1153 (73%), Gaps = 9/1153 (0%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            K  + K +LRR+NLN ERPD  +LRTLDSSI+RNT VIKKLK IN+EQ++GL++ELK+VN
Sbjct: 35   KIIDQKTSLRRSNLNPERPDANYLRTLDSSIKRNTTVIKKLKTINDEQKDGLMDELKSVN 94

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAV+ ICE+KLRS+DI AAVQVCSLLHQRYKDFSP LIQGLLKVF P K+ DD 
Sbjct: 95   LSKFVSEAVSYICEAKLRSADIQAAVQVCSLLHQRYKDFSPCLIQGLLKVFFPGKSGDDL 154

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            D D+++RAM++RSTLKLL+ELY+VG+VEDA IF++I+KDLTS +H KDR+ TQ NLSLL 
Sbjct: 155  DADKNSRAMKKRSTLKLLIELYFVGIVEDASIFVNIIKDLTSAEHLKDREGTQTNLSLLS 214

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            +FARQG+ FLG     Q+  +E +KDLN+T EQKK  +KA   +YDA  +LLQ+EH+SLR
Sbjct: 215  TFARQGKFFLGLQSHGQEAYDEFFKDLNVTAEQKKFFKKALNSYYDAVAELLQSEHASLR 274

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
             ME ENAK+L++KGELS+EN  +YEKLRKS++ LLR VSSLAE+LDMQPPVMP+D NTTR
Sbjct: 275  LMEAENAKVLSAKGELSDENTASYEKLRKSFDQLLRGVSSLAESLDMQPPVMPDDGNTTR 334

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEPKATEQANK 2674
            VT T   +  ++ K+++ALE +WDD+DTKAFYESLPDLRAFVPAVLLGE EPK  EQ  K
Sbjct: 335  VT-TGTDALPSSGKESSALEPIWDDEDTKAFYESLPDLRAFVPAVLLGEVEPKLNEQHAK 393

Query: 2673 VSEQHQEQLPXXXXXXXXXXXXTPKEPEVKT-----AXXXXXXXXXXXXXXXXXXXXXXX 2509
              EQ  E               +  E +++                              
Sbjct: 394  GREQSSESTSEQDTELHDNVQTSATEHQLEVKVDDVVKESEDKDKEKGKDGEKEKSKEKD 453

Query: 2508 XXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNSKSNRKKLVRALF 2329
                        + LDG S+D LLQRLPG VSRDLIDQLTV+FCYLNSK+NRKKLVRALF
Sbjct: 454  LDKKNEREKEKGRALDGASLDNLLQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVRALF 513

Query: 2328 NVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIETKIRNIRF 2149
            NV RTSLELLPYYSR+VATLSTCMKD+ SMLL MLEEEFNFLINKKDQ+NIETKI+NIRF
Sbjct: 514  NVNRTSLELLPYYSRLVATLSTCMKDVPSMLLSMLEEEFNFLINKKDQINIETKIKNIRF 573

Query: 2148 IGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRSPETTTRMTNMLE 1969
            IGEL KFK+APP  VF+CLKACLDDF+HHNIDVACNLLETCGRFL+RSPETT RM NMLE
Sbjct: 574  IGELCKFKMAPPALVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANMLE 633

Query: 1968 ILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRKLLFSDLDKQSIE 1789
            ILMRLKNVKNLD RHSTLVENAYYLCKPPE+SAR++KVRPPL QY+RKLLFSDLDK S+E
Sbjct: 634  ILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARISKVRPPLHQYIRKLLFSDLDKSSVE 693

Query: 1788 HVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQEAFSVAVVDEVLE 1609
            HV RQLRKLPW+EC+ Y+LKCF+KVH+GKYSQVHLIA LTA LSRY + F+VAVVDEVLE
Sbjct: 694  HVLRQLRKLPWAECQQYLLKCFLKVHKGKYSQVHLIALLTASLSRYHDDFAVAVVDEVLE 753

Query: 1608 EIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFFGHGTPEHDTLDP 1429
            EIR+GLE N+YG QQRR+AHMRFLGELY+Y+ +DSSV+FDTLYL++ FGHGTPE D LDP
Sbjct: 754  EIRVGLELNDYGMQQRRLAHMRFLGELYSYKHIDSSVVFDTLYLIIVFGHGTPEQDVLDP 813

Query: 1428 VEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIPLDVEFDLQDLFD 1249
             EDCFRIR++IT LQTCG +F +GSSKR+LDKFL+ FQRYI+SKG +PLD+EFD+QDLF 
Sbjct: 814  PEDCFRIRLIITLLQTCGHYFSKGSSKRKLDKFLLHFQRYIISKGPLPLDIEFDIQDLFA 873

Query: 1248 DLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKSSGATVLVTGNGK 1069
            +LRP M R+                      EK  S+ ++SD E  K        + NG+
Sbjct: 874  ELRPNMSRYSSIEELVAALVELEENERSAPVEKVESE-RHSDNESQKRQPRDAGPSVNGE 932

Query: 1068 AVVNGTDELGIDYVDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXXXXXXXXXXXXDP 889
            +  NG +E G D+   +SE                   +K  D                P
Sbjct: 933  SAANGVEENGKDHEVADSESYSDSGSIDGREEEDILSEDKSND---GSDNEGDDEDDGIP 989

Query: 888  MASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLELRTRPTLNMAIPMNI 709
            + S+E+E+V+VRQ K ++VDPKE+ DF+REL+A++QESL+SR+ E R+R  LNM +PMN+
Sbjct: 990  VGSDEDENVEVRQ-KVMKVDPKEQEDFDRELKALLQESLESRKSEARSRLPLNMMVPMNV 1048

Query: 708  FEGSKEHSRATEIESGDEVIDDESGN----NSVSVRVLVKRGNKQQAKQLYIPRDCSLVQ 541
             EGSK+ SRATE ESG+E +D+E GN    + V V+VL+K+G+KQQ +Q+ IP D S+VQ
Sbjct: 1049 LEGSKD-SRATESESGEETVDEEGGNAGSSSKVRVKVLMKKGHKQQTRQMLIPADSSIVQ 1107

Query: 540  SSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSGVPSRYHSGRGLWD 361
            S+           Q IKR +LEYNEREE++ + A+ Q  +W    +   S    GRG WD
Sbjct: 1108 STKQQEAAELEEKQSIKRRILEYNEREEEELNGAS-QMGNWGQGATNTSSIRSGGRGSWD 1166

Query: 360  GYGRSHGGRQRYH 322
            G  R  GGRQR+H
Sbjct: 1167 GSTRG-GGRQRHH 1178


>ref|XP_003595517.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355484565|gb|AES65768.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1705

 Score = 1339 bits (3465), Expect = 0.0
 Identities = 715/1195 (59%), Positives = 858/1195 (71%), Gaps = 50/1195 (4%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            KS EAK ALR+ NLN ERPDTGF RTLDSSI+RNTAVIKKLKQINEEQRE L+++L++VN
Sbjct: 32   KSIEAKMALRQTNLNPERPDTGFFRTLDSSIKRNTAVIKKLKQINEEQRESLMDDLRSVN 91

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAVAAICE+KLRSSDI AAVQ+CSLLHQRYKDF P LIQGLLKVFSP K+ D+ 
Sbjct: 92   LSKFVSEAVAAICEAKLRSSDIQAAVQICSLLHQRYKDFVPTLIQGLLKVFSPGKSGDET 151

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            D+D++ +AM++RS+LKLL+EL++VGV+ED GIF+SI+KDLTS +  KDR+ TQ +L+LL 
Sbjct: 152  DSDKNLKAMKKRSSLKLLLELFFVGVIEDGGIFISIIKDLTSVEQLKDREATQTSLTLLS 211

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            SFARQGRIFLG  +   +  EE  K LNIT +QKK +RKA   FYD + +LLQ+EHSSLR
Sbjct: 212  SFARQGRIFLGLSVTGPEIHEEFMKGLNITADQKKVIRKACYSFYDTAAELLQSEHSSLR 271

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
             ME EN+K+LN+KGELSEEN ++YEKLRKSY+HL R+VSSLAEALDMQPPVMPED +TTR
Sbjct: 272  LMEHENSKILNAKGELSEENLSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDGHTTR 331

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEP-------K 2695
            VTS EE   + A KD++ +E +WDD+DT+AFYE LPDLRAFVPAVLLGE EP       K
Sbjct: 332  VTSGEEAVSSAAGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLLGETEPKVNEQSVK 391

Query: 2694 ATEQANKV-SEQHQEQL-PXXXXXXXXXXXXTPKEPEVKTAXXXXXXXXXXXXXXXXXXX 2521
              +Q+ ++  E  + QL               P+    +                     
Sbjct: 392  GQDQSTEILPESDKSQLVTLDSGEVSTESSVLPEGESSEIVNDKEEKEKSKELDRDKEKE 451

Query: 2520 XXXXXXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNSKSNRKKLV 2341
                            + L+GT++D LLQRLPG VSRDLIDQLTV+FCYLNSKSNRKKLV
Sbjct: 452  KEKEGEKKGEHEKEKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLV 511

Query: 2340 RALFNVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIETKIR 2161
            RALF+VPRTSLELL YYSRMVATLSTCMKD++S+LLQMLEEEFNFLINKKDQMNIETKIR
Sbjct: 512  RALFSVPRTSLELLAYYSRMVATLSTCMKDVSSLLLQMLEEEFNFLINKKDQMNIETKIR 571

Query: 2160 NIRFIGELAKFKIAPPGFVFTCLK-----------------------ACLDDFTHHNIDV 2050
            NIRFIGEL KFKIAP G VF+CLK                       ACLDDF+HHNIDV
Sbjct: 572  NIRFIGELCKFKIAPAGLVFSCLKNEYMYCDVAYKLLNPQFMLLSFQACLDDFSHHNIDV 631

Query: 2049 ACNLLETCGRFLFRSPETTTRMTNMLEILMRLKNVKNLDARHSTLVENAYYLCKPPEKSA 1870
            ACNLLETCGRFL+RSPET+ RM NMLEILMRLKNVKNLD RHSTLVENAYYLCKPPE+SA
Sbjct: 632  ACNLLETCGRFLYRSPETSIRMGNMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSA 691

Query: 1869 RVAKVRPPLQQYVRKLLFSDLDKQSIEHVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQV 1690
            RVAKVRPPL QY+RKLLFSDLDK +IEHV RQLRKLPWS+CE Y+LKCFMKVH+GKY Q+
Sbjct: 692  RVAKVRPPLHQYIRKLLFSDLDKTTIEHVLRQLRKLPWSDCELYLLKCFMKVHKGKYGQI 751

Query: 1689 HLIASLTAVLSRYQEAFSVAVVDEVLEEIRIGLETNEYGTQQRRIAHMRFLGELYNYRLV 1510
            HL+ASL A LSRY + F+VA+VDEVLEEIRIGLE N+YG QQRR+A+MRFLGELYNY+  
Sbjct: 752  HLVASLAAGLSRYHDEFAVAIVDEVLEEIRIGLELNDYGMQQRRVANMRFLGELYNYKHA 811

Query: 1509 DSSVIFDTLYLVLFFGHGTPEHDTLDPVEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKF 1330
            DSSVIF+TLYL++ FGHGTPE D LDP ED FRIR++IT L+TCG +FD GSSK++LD+F
Sbjct: 812  DSSVIFETLYLIIVFGHGTPEQDVLDPPEDFFRIRLIITLLETCGHYFDHGSSKKKLDRF 871

Query: 1329 LVFFQRYILSKGAIPLDVEFDLQDLFDDLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEK 1150
            L+ FQRYILSKGA+PLDVEFDLQDLF DLRP MVR+                   V ++K
Sbjct: 872  LMHFQRYILSKGALPLDVEFDLQDLFADLRPSMVRYTSVDEVNAALVELEEHDRIVSTDK 931

Query: 1149 TNSDHKYSDTEGVKSSGATVLVTGNGKAVVNGTDELGIDYVDTESELXXXXXXXXXXXXX 970
             +S+ K+S T+   S   +  +  NG+   NG +E G+   D  +E              
Sbjct: 932  ASSE-KHSHTDKPLSRSTSTTMVSNGQNNDNGIEENGVQ--DNVNEGEHDSGSDVIDAEG 988

Query: 969  XXXXXEKYVDHXXXXXXXXXXXXXXDPMASEEEEDVQVRQKKSLEVDPKEEADFERELRA 790
                     +H               P AS++E++V VRQK + EVDP EEADF++EL+A
Sbjct: 989  HDDEELDEENHDDGGETEDDDEDEDGP-ASDDEDEVHVRQKVT-EVDPLEEADFDQELKA 1046

Query: 789  IMQ---------------ESLDSRRLELRTRPTLNMAIPMNIFEGSKE--HSRATEIESG 661
            ++Q               ES++ RRLELR RPTLNM IPMN+FEGS +  H R T  ESG
Sbjct: 1047 VVQIFFGRMGQRCSDVTDESMEQRRLELRGRPTLNMMIPMNVFEGSAKDHHGRGTGGESG 1106

Query: 660  DEVIDDESG-NNSVSVRVLVKRGNKQQAKQLYIPRDCSLVQSSXXXXXXXXXXXQDIKRL 484
            DE +D+++G +  V V+VLVKRGNKQQ KQ+YIP D SLVQS+           +DIKRL
Sbjct: 1107 DEALDEDTGVSKEVQVKVLVKRGNKQQTKQMYIPSDSSLVQSTKQKEAAELQEKEDIKRL 1166

Query: 483  VLEYNEREEDDASAATMQPPHWPTVNSGVPSRYHSGRGLWDGYGRSHGGRQRYHH 319
            +LEYN+REE++ +    QP +W  + SG       G       GR  G R R+HH
Sbjct: 1167 ILEYNDREEEELNGLGAQPSNW--MQSGGNRVGGRGNSFEGTSGRGGGSRHRHHH 1219


>ref|XP_004953184.1| PREDICTED: regulator of nonsense transcripts UPF2-like isoform X1
            [Setaria italica] gi|514715195|ref|XP_004953185.1|
            PREDICTED: regulator of nonsense transcripts UPF2-like
            isoform X2 [Setaria italica]
          Length = 1194

 Score = 1330 bits (3443), Expect = 0.0
 Identities = 694/1152 (60%), Positives = 847/1152 (73%), Gaps = 8/1152 (0%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            K  + K +LRR+NLN ERPD  +LRTLDSSI+RNT VIKKLK IN+EQ++GL++ELK+VN
Sbjct: 35   KIIDQKTSLRRSNLNPERPDANYLRTLDSSIKRNTTVIKKLKTINDEQKDGLMDELKSVN 94

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAV+ ICE+KLRS+DI AAVQVCSLLHQRYKDFSP LIQGLLKVF P K+ DD 
Sbjct: 95   LSKFVSEAVSYICEAKLRSADIQAAVQVCSLLHQRYKDFSPCLIQGLLKVFFPGKSGDDL 154

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            D D+++RAM++RSTLKLL+ELY+VG+VEDA IF++I+KDLTS +H KDR+ TQ NLSLL 
Sbjct: 155  DADKNSRAMKKRSTLKLLIELYFVGIVEDASIFVNIIKDLTSAEHLKDREATQTNLSLLS 214

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            +FARQGR  +G     Q+  +E +KDLN+T +QKK  +KA   +YDA  +LLQ+EH+SLR
Sbjct: 215  TFARQGRFLVGLQSHGQEAYDEFFKDLNVTADQKKFFKKALNSYYDAVAELLQSEHASLR 274

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
             ME ENAK+L++KGELS+EN  +YEKLRKS++ LLR VSSLAEALDMQPPVMP+D NTTR
Sbjct: 275  LMEAENAKVLSAKGELSDENTASYEKLRKSFDQLLRGVSSLAEALDMQPPVMPDDGNTTR 334

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEPKATEQANK 2674
            VT+  + S ++  K+++ALE +WDDDDTKAFYESLPDLRAFVPAVLLGE EPK+ EQ  K
Sbjct: 335  VTTGTDVSPSSG-KESSALEPIWDDDDTKAFYESLPDLRAFVPAVLLGEVEPKSNEQHAK 393

Query: 2673 VSEQHQEQLPXXXXXXXXXXXXTPKEPEVKT-----AXXXXXXXXXXXXXXXXXXXXXXX 2509
              EQ  E               +  E +++      A                       
Sbjct: 394  GREQSSESTSEQEIELHDNAQTSANEHQLEVKVDDGAKDNEDKDKERGKDGEKEKFKEKD 453

Query: 2508 XXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNSKSNRKKLVRALF 2329
                        + LDG S+D LLQRLPG VSRDLIDQLTV+FCYLNSK+NRKKLVRALF
Sbjct: 454  LDKKNEREKEKVRGLDGASLDNLLQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVRALF 513

Query: 2328 NVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIETKIRNIRF 2149
            NV RTSLELLPYYSR+VATLSTCMKD+ SMLL MLEEEFNFLINKKDQ+NIETKI+NIRF
Sbjct: 514  NVNRTSLELLPYYSRLVATLSTCMKDVPSMLLSMLEEEFNFLINKKDQINIETKIKNIRF 573

Query: 2148 IGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRSPETTTRMTNMLE 1969
            IGEL KFK+APP  VF+CLKACLDDF+HHNIDVACNLLETCGRFL+RSPETT RM NMLE
Sbjct: 574  IGELCKFKMAPPALVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANMLE 633

Query: 1968 ILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRKLLFSDLDKQSIE 1789
            ILMRLKNVKNLD RHSTLVENAYYLCKPPE+SAR++KVRPPL QY+RKLLFSDLDK S+E
Sbjct: 634  ILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARISKVRPPLHQYIRKLLFSDLDKSSVE 693

Query: 1788 HVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQEAFSVAVVDEVLE 1609
            HV RQLRKLPW+EC+ Y+LKCF+KVH+GKYSQVHLIA LTA LSRY + F+VAVVDEVLE
Sbjct: 694  HVLRQLRKLPWAECQQYLLKCFLKVHKGKYSQVHLIALLTASLSRYHDDFAVAVVDEVLE 753

Query: 1608 EIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFFGHGTPEHDTLDP 1429
            EIR+GLE N+YG QQRR+AHMRFLGELY+Y+ +DSSV+F+TLYL++ FG+GTPE D LDP
Sbjct: 754  EIRVGLELNDYGMQQRRLAHMRFLGELYSYKHIDSSVVFETLYLIIVFGYGTPEQDVLDP 813

Query: 1428 VEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIPLDVEFDLQDLFD 1249
             EDCFRIR++IT LQTCG +F +GSSKR+LDKFL+ FQRYI+SKG +PLD+EFD+QDLF 
Sbjct: 814  PEDCFRIRLIITLLQTCGHYFSKGSSKRKLDKFLLHFQRYIMSKGPLPLDIEFDIQDLFA 873

Query: 1248 DLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKSSGATVLVTGNGK 1069
            ++RP M R+                      EK  ++ ++SD E  K        + NG+
Sbjct: 874  EIRPNMTRYSSIEELNAALVELEENERSAPVEKAENE-RHSDNESQKRQPRDAAPSVNGQ 932

Query: 1068 AVVNGTDELGIDYVDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXXXXXXXXXXXXDP 889
            +  NG +E G D+   +SE                   E                    P
Sbjct: 933  STTNGVEENGKDHEVADSESYSGSGSIDGREDEEDILSED--KSNDGSDNEGDDEDDGIP 990

Query: 888  MASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLELRTRPTLNMAIPMNI 709
            + S+E+E+V VRQ K ++VD KE+ DF+REL+A++QESL+SR+ E R+R  LNM +PMN+
Sbjct: 991  VGSDEDENVGVRQ-KVVQVDLKEQEDFDRELKALLQESLESRKSEARSRLPLNMMVPMNV 1049

Query: 708  FEGSKEHSRATEIESGDEVIDDESGN---NSVSVRVLVKRGNKQQAKQLYIPRDCSLVQS 538
             EGSK+  RATE ESG+E +D+E GN   + V V+VL+K+G+KQQ KQ+ IP D SLV S
Sbjct: 1050 LEGSKD-QRATESESGEETVDEEGGNVGSSKVRVKVLMKKGHKQQTKQMLIPADSSLVLS 1108

Query: 537  SXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSGVPSRYHSGRGLWDG 358
            +           Q IKR +LEYNEREE++ +    Q  +W    S   S    GRG WDG
Sbjct: 1109 TKQQEAAELEEKQSIKRRILEYNEREEEELNGGVSQMGNWGQGASTTSSIRSGGRGTWDG 1168

Query: 357  YGRSHGGRQRYH 322
              R  GGRQR+H
Sbjct: 1169 STRG-GGRQRHH 1179


>ref|XP_006647557.1| PREDICTED: regulator of nonsense transcripts UPF2-like isoform X1
            [Oryza brachyantha] gi|573919899|ref|XP_006647558.1|
            PREDICTED: regulator of nonsense transcripts UPF2-like
            isoform X2 [Oryza brachyantha]
          Length = 1190

 Score = 1323 bits (3423), Expect = 0.0
 Identities = 689/1153 (59%), Positives = 841/1153 (72%), Gaps = 9/1153 (0%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            K  + K ALRR+NL  ERPD  +LRTLDSSI+RNT VIKKLK IN+EQ++GL++ELK+VN
Sbjct: 35   KLIDQKTALRRSNLTPERPDANYLRTLDSSIKRNTTVIKKLKTINDEQKDGLMDELKSVN 94

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAV+ ICE+KLRS+DI AAVQVCSLLHQRYKDFSP L+QGLLKVF P K+ DD 
Sbjct: 95   LSKFVSEAVSYICEAKLRSADIQAAVQVCSLLHQRYKDFSPCLVQGLLKVFFPGKSGDDL 154

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            D D+++RAM++RSTLKLL+ELY+VG+VEDA IF++I+KDLTS +H KDR+ TQ NLSLL 
Sbjct: 155  DADKNSRAMKKRSTLKLLIELYFVGIVEDASIFVNIIKDLTSLEHLKDREATQANLSLLS 214

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            +FARQGR F+G     Q+  +EL+KDLN+T +QKK  +KA   +YDA  +LLQ+EH+SLR
Sbjct: 215  AFARQGRFFIGLQSHGQEAYDELFKDLNVTADQKKFFKKALHSYYDAVAELLQSEHASLR 274

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
             ME ENAK+L +KGELS+EN  +YEKLRKS++ L R VSSLAEALDMQPPVMP+D NTTR
Sbjct: 275  LMEAENAKVLTAKGELSDENTASYEKLRKSFDQLQRGVSSLAEALDMQPPVMPDDGNTTR 334

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEPKATEQANK 2674
            VT+  + +  +  K+ +ALE +WDD+DTKAFYESLPDLRAFVPAVLLGE EPK  E+  +
Sbjct: 335  VTTGSDVAPPST-KEPSALEPIWDDEDTKAFYESLPDLRAFVPAVLLGEAEPKLNEKGRE 393

Query: 2673 VSEQHQEQ-LPXXXXXXXXXXXXTPKEPEVKTAXXXXXXXXXXXXXXXXXXXXXXXXXXX 2497
              E   EQ +                E +                               
Sbjct: 394  QPESIAEQDIEVHDTAQTSSITEYQLEGKADDGVKDSEEKDKDKGKGADKEKSKEKDFDR 453

Query: 2496 XXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNSKSNRKKLVRALFNVPR 2317
                    + +DG S+D LLQRLPG VSRDLIDQLTV+FCYLNSK++RKKLVR LFNVPR
Sbjct: 454  KEREKEKIRAVDGASLDNLLQRLPGCVSRDLIDQLTVEFCYLNSKASRKKLVRTLFNVPR 513

Query: 2316 TSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGEL 2137
            TSLELLPYYSR+VATLSTCMKD+ SML+ MLEEEFNFLINKKDQ+NIETKI+NIRFIGEL
Sbjct: 514  TSLELLPYYSRLVATLSTCMKDVPSMLISMLEEEFNFLINKKDQINIETKIKNIRFIGEL 573

Query: 2136 AKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRSPETTTRMTNMLEILMR 1957
             KFKIAP   VF+CLK+CLDDF+HHNIDVACNLLETCGRFL+RSPETT RM NMLEILMR
Sbjct: 574  CKFKIAPAALVFSCLKSCLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMR 633

Query: 1956 LKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRKLLFSDLDKQSIEHVCR 1777
            LKNVKNLD RHSTLVENAYYLCKPPE+SARV+KVRPPL QY+RKLLFSDLDK S+EH+ R
Sbjct: 634  LKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSVEHILR 693

Query: 1776 QLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQEAFSVAVVDEVLEEIRI 1597
            QLRKLPW EC+ Y++KCF+KVH+GKYS VHLIA LTA LSR+ + F+VAVVDEVLEEIR+
Sbjct: 694  QLRKLPWVECQQYLIKCFLKVHKGKYSHVHLIALLTAGLSRHHDDFAVAVVDEVLEEIRV 753

Query: 1596 GLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFFGHGTPEHDTLDPVEDC 1417
            GLE N+YG QQRR+AHMRFLGELY+Y+ +DSSV+F+TLYL++ FGHGTPE D LDP EDC
Sbjct: 754  GLELNDYGMQQRRLAHMRFLGELYSYKHIDSSVVFETLYLIIVFGHGTPEQDVLDPPEDC 813

Query: 1416 FRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIPLDVEFDLQDLFDDLRP 1237
            FRIR++IT LQTCG +F+RGSSKR+LDKFL+ FQRYI+SKG +PLD+EFD+QDLF +LRP
Sbjct: 814  FRIRLIITLLQTCGHYFNRGSSKRKLDKFLLHFQRYIISKGPLPLDIEFDVQDLFSELRP 873

Query: 1236 KMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKSSGATVLVTGNGKAVVN 1057
             M R+                      EK  S+ K SD+E  K        + NG+   N
Sbjct: 874  NMARYSSLEELDAALAELEESERAASVEKPESE-KLSDSESQKVQPHDTAFSANGRGSAN 932

Query: 1056 GTDELGIDY---VDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXXXXXXXXXXXXDPM 886
            G +E G D+    DTES                    +                    P 
Sbjct: 933  GAEENGKDHEEGADTESYSGSGSTDGHEDEEDLMFEEKS----NDASENEGDDEDDGMPA 988

Query: 885  ASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLELRTRPTLNMAIPMNIF 706
             S+E+E V+VR  K ++VDPKE+ DF+REL+A++QESL+SR+ E+R R TLNM +PMN+ 
Sbjct: 989  GSDEDEGVEVRH-KVVQVDPKEQEDFDRELKALLQESLESRKSEVRPRATLNMMVPMNVL 1047

Query: 705  EGSKEHSRATEIESGDEVIDDESGN----NSVSVRVLVKRGNKQQAKQLYIPRDCSLVQS 538
            EGSK+  RA E ESG+E +D+E G+    + V V+VL+K+G+KQQ KQ++IP DCSLVQS
Sbjct: 1048 EGSKD-PRAVESESGEETVDEEGGSAGGGSKVRVKVLMKKGHKQQTKQMFIPGDCSLVQS 1106

Query: 537  SXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSGVPSRYHS-GRGLWD 361
            +           Q IKR +LEYNEREE++ +  + Q  +W    S   S   S GRG WD
Sbjct: 1107 TKQQEAAELEEKQSIKRRILEYNEREEEEMNGGSSQMGNWSQGGSSTGSSIRSGGRGSWD 1166

Query: 360  GYGRSHGGRQRYH 322
            G  R  G RQR+H
Sbjct: 1167 GSIR--GARQRHH 1177


>ref|XP_003575417.1| PREDICTED: regulator of nonsense transcripts 2-like [Brachypodium
            distachyon]
          Length = 1195

 Score = 1301 bits (3367), Expect = 0.0
 Identities = 682/1157 (58%), Positives = 842/1157 (72%), Gaps = 16/1157 (1%)
 Frame = -1

Query: 3744 EAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVNLSK 3565
            + K  LRR+N N ERPD  +LRTLDSSI+RNT VIKKLK IN+EQ++GL++ELK+VNLSK
Sbjct: 38   DQKTTLRRSNQNPERPDANYLRTLDSSIKRNTTVIKKLKTINDEQKDGLMDELKSVNLSK 97

Query: 3564 FVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQDTD 3385
            FV+EAV+ ICE+KLRS+DI AAVQVCSLLH+RYKDFSP LIQGLLKVF P K+ DD D D
Sbjct: 98   FVSEAVSYICEAKLRSADIQAAVQVCSLLHRRYKDFSPCLIQGLLKVFFPGKSGDDMDVD 157

Query: 3384 RSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLVSFA 3205
            +++RAM++RSTLKLL+ELY+VG+VEDA IF++I+KDLTS +H KDR+ TQ NLSLL +F 
Sbjct: 158  KNSRAMKKRSTLKLLIELYFVGIVEDASIFVNIIKDLTSLEHLKDREATQTNLSLLSTFV 217

Query: 3204 RQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLRQME 3025
            RQGR+F+G      +  +E +KDLN+T +QKK  +KA   +YDA ++LLQ+EH+SL  ME
Sbjct: 218  RQGRLFIGLQSHGHEPYDEFFKDLNVTADQKKFFKKALNSYYDAVSELLQSEHASLHLME 277

Query: 3024 QENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTRVTS 2845
             ENAK+L++KGELS+EN  +YEKLRKS++ LLR VSSLAEA+D+QPPVMP+D NTTRVT+
Sbjct: 278  AENAKVLSAKGELSDENTASYEKLRKSFDQLLRGVSSLAEAIDLQPPVMPDDGNTTRVTT 337

Query: 2844 TEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEPKATEQANK--- 2674
              + + ++  K+++ LE +WDDDDTK FYESLPDLRAFVPAVLLGE E K  EQ  K   
Sbjct: 338  GTDVTPSSG-KESSVLEPIWDDDDTKTFYESLPDLRAFVPAVLLGEAEQKLNEQHAKGRE 396

Query: 2673 -----VSEQHQEQLPXXXXXXXXXXXXTPKEPEVKTAXXXXXXXXXXXXXXXXXXXXXXX 2509
                  +EQ  E                 K  +V  A                       
Sbjct: 397  QSNESSAEQETEAHDNAQTSSATEDQLEGKTDDV--AKDNEDKDKDKGKDPEKEKTKDKD 454

Query: 2508 XXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNSKSNRKKLVRALF 2329
                        +  DG S+D LLQRLPG VSRDLIDQLTV+FCYLNSK++RKKLVRA+F
Sbjct: 455  LDRKTEKEKEKVRASDGGSLDNLLQRLPGCVSRDLIDQLTVEFCYLNSKASRKKLVRAVF 514

Query: 2328 NVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQMNIETKIRNIRF 2149
            +VPRTSLELLPYYSR+VATLS CMKD+ SMLL MLEEEFNFLINKKDQ+NIETKI+NIRF
Sbjct: 515  SVPRTSLELLPYYSRLVATLSLCMKDVPSMLLSMLEEEFNFLINKKDQINIETKIKNIRF 574

Query: 2148 IGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRSPETTTRMTNMLE 1969
            IGEL KFKIAP   VF+CLKACLDDF+HHNIDVACNLLETCGRFL+RSPETT RM NMLE
Sbjct: 575  IGELCKFKIAPAALVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANMLE 634

Query: 1968 ILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRKLLFSDLDKQSIE 1789
            ILMRLKNVKNLD RHSTLVENAYYLCKPPE+SARV+KVRPPL QY+RKLLFSDLDK S+E
Sbjct: 635  ILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSKVRPPLYQYIRKLLFSDLDKSSVE 694

Query: 1788 HVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQEAFSVAVVDEVLE 1609
            HV RQLRKLPW+EC+ Y++KCF+KVH+GKYSQVHLIA LTA LSRY + F+VAVVDEVLE
Sbjct: 695  HVLRQLRKLPWAECQQYLVKCFLKVHKGKYSQVHLIALLTAGLSRYHDDFAVAVVDEVLE 754

Query: 1608 EIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFFGHGTPEHDTLDP 1429
            EIR+GLE N+Y  QQRR+AHMRFLGELY+Y+ +DSSV+F+TLYL++ FGHGT E D LDP
Sbjct: 755  EIRVGLELNDYAMQQRRLAHMRFLGELYSYKHIDSSVVFETLYLIILFGHGTQEQDVLDP 814

Query: 1428 VEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIPLDVEFDLQDLFD 1249
             EDCFRIR++IT LQTCG +F RGSSKR+LDKFL+ FQRYI+ KG +PLD+EFD+QDLF 
Sbjct: 815  PEDCFRIRLIITLLQTCGHYFTRGSSKRKLDKFLLHFQRYIIMKGPLPLDIEFDIQDLFV 874

Query: 1248 DLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKSSGATVLVTGNGK 1069
            +LRP M R+                   V +EK  S+ ++SD E  K        + NG+
Sbjct: 875  ELRPNMTRYSSIDELNSALVELEEHERAVSAEKIESE-RHSDNESQKKQPHDAAFSVNGR 933

Query: 1068 AVVNGTDELGIDY---VDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXXXXXXXXXXX 898
              VNG +  G ++    D+ES                    +                  
Sbjct: 934  GSVNGAEGNGREHGEAADSESYSDSGSIDGHEDEEDLLSDNKS----NDASENEGDDEDD 989

Query: 897  XDPMASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLELRTRPTLNMAIP 718
              P+ S+E+E V+VRQ K ++VDPKE+ DF+REL+A++QESL+SR+ E+RTR TLNM +P
Sbjct: 990  GIPVGSDEDEGVEVRQ-KVVQVDPKEQEDFDRELKALLQESLESRKSEVRTRSTLNMKVP 1048

Query: 717  MNIFEGSKEHSRATEIESGDEVIDDESGN----NSVSVRVLVKRGNKQQAKQLYIPRDCS 550
            MN+ EGSK+  RA E ESG+E +D+E GN    + V V+VL+K+G+KQQ +Q++IP DC 
Sbjct: 1049 MNVLEGSKD-QRAGESESGEETMDEEGGNAGGGSKVRVKVLMKKGHKQQTRQMFIPGDCP 1107

Query: 549  LVQSSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSGVPSRYHS-GR 373
            LVQS+           Q IKR +LEYNEREE++ +  + Q  +W    S   S   S GR
Sbjct: 1108 LVQSTKEQEAAELEEKQSIKRRILEYNEREEEEMNGGSSQMGNWGQGGSSTGSSIRSGGR 1167

Query: 372  GLWDGYGRSHGGRQRYH 322
            G WDG+ R  GG +R+H
Sbjct: 1168 GNWDGWIR--GGARRHH 1182


>ref|XP_006293584.1| hypothetical protein CARUB_v10022530mg [Capsella rubella]
            gi|482562292|gb|EOA26482.1| hypothetical protein
            CARUB_v10022530mg [Capsella rubella]
          Length = 1184

 Score = 1283 bits (3321), Expect = 0.0
 Identities = 687/1167 (58%), Positives = 846/1167 (72%), Gaps = 22/1167 (1%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            K  EAK  LR+ NLN ERPD+ +LRTLDSSI+RNTAVIKKLKQINEEQREGL+++L+ VN
Sbjct: 27   KLVEAKMTLRQNNLNPERPDSAYLRTLDSSIKRNTAVIKKLKQINEEQREGLMDDLRGVN 86

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAV AICE+KL+SSDI AAVQ+CSLLHQRYK+FSP+L QGLLK+F P K+ +D 
Sbjct: 87   LSKFVSEAVTAICEAKLKSSDIQAAVQICSLLHQRYKEFSPSLTQGLLKIFFPGKSAEDL 146

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            + D++++AM++RSTLKLL+ELYYVGV+ED+ IF++I+KDLTS +  KDRDTTQ NL+LL 
Sbjct: 147  EADKNSKAMKKRSTLKLLLELYYVGVIEDSNIFINIIKDLTSIEQLKDRDTTQTNLTLLA 206

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            SFARQGRIFLG PI+ QD  EE +K L++T +QKK+ +KAF  +YDA  DLLQ+EH  L 
Sbjct: 207  SFARQGRIFLGLPISGQD--EEFFKGLDVTADQKKSFKKAFNTYYDALADLLQSEHQLLH 264

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
            QME++NAK++N+KGELSE++A++YEKLRKSY+HL R++SSLAE+LDMQPP MPED  TTR
Sbjct: 265  QMEKDNAKLVNAKGELSEDSASSYEKLRKSYDHLYRNISSLAESLDMQPPAMPEDG-TTR 323

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEPKA------ 2692
            +T+ +E S + A KD +  E +WDD+DTK FYE LPDLRAFVPAVLLGE E K+      
Sbjct: 324  LTAGDEASPSGAVKDTSVPEPIWDDEDTKTFYECLPDLRAFVPAVLLGETESKSSEQSTK 383

Query: 2691 -----TEQANKVSEQHQ-------EQLPXXXXXXXXXXXXTPKEPEVKTAXXXXXXXXXX 2548
                 +E +++V E  Q       E                PKE E              
Sbjct: 384  AKDKSSESSSEVVESQQTTEDAITEGPADSGSMADGSNTEQPKEKE--------EVDKEK 435

Query: 2547 XXXXXXXXXXXXXXXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLN 2368
                                     K LD  + D LLQRLPG VSRDLIDQLTV++CYLN
Sbjct: 436  AKDAKKEKGKEKDSEKKLENEKDKGKSLDVANFDRLLQRLPGCVSRDLIDQLTVEYCYLN 495

Query: 2367 SKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKD 2188
            SK+NRKKLV+ALFNVPRTSLELL YYSRMVATL+TCMKDI SML+QMLE+EFN L++KKD
Sbjct: 496  SKTNRKKLVKALFNVPRTSLELLAYYSRMVATLATCMKDIPSMLVQMLEDEFNSLVHKKD 555

Query: 2187 QMNIETKIRNIRFIGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFR 2008
            QMNIETKIRNIRFIGEL KFKI P G VF+CLKACLD+FTHHNIDVACNLLETCGRFL+R
Sbjct: 556  QMNIETKIRNIRFIGELCKFKIVPAGLVFSCLKACLDEFTHHNIDVACNLLETCGRFLYR 615

Query: 2007 SPETTTRMTNMLEILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVR 1828
            SPETT RMTNML+ILMRLKNVKNLD R STLVENAYYLCKPPE+SAR++KVRPPL QY+R
Sbjct: 616  SPETTLRMTNMLDILMRLKNVKNLDPRQSTLVENAYYLCKPPERSARISKVRPPLHQYIR 675

Query: 1827 KLLFSDLDKQSIEHVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQ 1648
            KLLFSDLDK+SI +V +QLRKLPWSECE Y+LKCFMKVH+GKY Q+HLIASLT+ LSRY 
Sbjct: 676  KLLFSDLDKESIANVLKQLRKLPWSECEQYILKCFMKVHKGKYGQIHLIASLTSGLSRYH 735

Query: 1647 EAFSVAVVDEVLEEIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLF 1468
            + F+VAVVDEVLEEIR+GLE NEYG QQ+R+AHMRFLGELYNY   DSSVIF+TLYL L 
Sbjct: 736  DEFAVAVVDEVLEEIRVGLELNEYGAQQKRLAHMRFLGELYNYEHADSSVIFETLYLTLL 795

Query: 1467 FGHGTPEHDTLDPVEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAI 1288
            +GHGT E + LDP ED FRIRMVI  L+TCG +FDRGSSK+RLD+FL+ FQRYIL+KG +
Sbjct: 796  YGHGTSEQEVLDPPEDLFRIRMVIILLETCGHYFDRGSSKKRLDQFLIHFQRYILNKGHL 855

Query: 1287 PLDVEFDLQDLFDDLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVK 1108
            PLD+EFDLQDLF +LRP M R+                  H  S    S  + SDT+   
Sbjct: 856  PLDIEFDLQDLFANLRPNMTRY-ATIDEVNAAILKLEEREHASSGDKFSVERDSDTK-PP 913

Query: 1107 SSGATVLVTGNGKAVVNGTDELGIDYVDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXX 928
            S  ++V+++ NGK+      E G  + + ES+                     + D    
Sbjct: 914  SRSSSVVISSNGKSAAKDIGENGEAHGE-ESDSDSGSGSVVRDGQNEELDDGNH-DRGSE 971

Query: 927  XXXXXXXXXXXDPMASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLELR 748
                        P  S++  + +V+Q K + VDP+E ADF++EL+A++QES++ R+LELR
Sbjct: 972  SDDGDGYDDGDGP-GSDDGNEFRVKQ-KVVTVDPEELADFDKELKALLQESMEQRKLELR 1029

Query: 747  TRPTLNMAIPMNIFEGS-KEHSRATEI--ESGDEVIDDESG-NNSVSVRVLVKRGNKQQA 580
             RP LNM IPM++FEGS K+H     +  E+G+EV+D+E+G    V V+VLVKRGNKQQ 
Sbjct: 1030 GRPALNMTIPMSVFEGSGKDHHHFGRVVDENGEEVMDEENGEQREVQVKVLVKRGNKQQT 1089

Query: 579  KQLYIPRDCSLVQSSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSG 400
            +Q+ IP DCSLVQS+           QDIKRLVLEYNER+E++A+    Q  +W T   G
Sbjct: 1090 RQMLIPSDCSLVQSTKQKEAAELEEKQDIKRLVLEYNERDEEEANGLGTQILNW-TPGGG 1148

Query: 399  VPSRYHSGRGLWDGYGRSHGGRQRYHH 319
                  S RG  +G G+S G R R+++
Sbjct: 1149 ----RGSTRGTGEGSGKSGGSRHRFYY 1171


>ref|NP_181459.4| RNA binding protein [Arabidopsis thaliana]
            gi|476007187|sp|F4IUX6.1|RENT2_ARATH RecName:
            Full=Regulator of nonsense transcripts UPF2; AltName:
            Full=Nonsense mRNA reducing factor UPF2; AltName:
            Full=Up-frameshift suppressor 2 homolog; Short=AtUpf2
            gi|330254557|gb|AEC09651.1| RNA binding protein
            [Arabidopsis thaliana]
          Length = 1181

 Score = 1276 bits (3301), Expect = 0.0
 Identities = 681/1166 (58%), Positives = 838/1166 (71%), Gaps = 21/1166 (1%)
 Frame = -1

Query: 3753 KSSEAKYALRRANLNTERPDTGFLRTLDSSIRRNTAVIKKLKQINEEQREGLLEELKAVN 3574
            KS EAK  LR+ NLN ERPD+ +LRTLDSSI+RNTAVIKKLKQINEEQREGL+++L+ VN
Sbjct: 27   KSIEAKLTLRQNNLNPERPDSAYLRTLDSSIKRNTAVIKKLKQINEEQREGLMDDLRGVN 86

Query: 3573 LSKFVTEAVAAICESKLRSSDINAAVQVCSLLHQRYKDFSPNLIQGLLKVFSPSKTNDDQ 3394
            LSKFV+EAV AICE+KL+SSDI AAVQ+CSLLHQRYK+FS +L QGLLKVF P K+ +D 
Sbjct: 87   LSKFVSEAVTAICEAKLKSSDIQAAVQICSLLHQRYKEFSASLTQGLLKVFFPGKSAEDL 146

Query: 3393 DTDRSTRAMRRRSTLKLLMELYYVGVVEDAGIFLSIVKDLTSTDHFKDRDTTQMNLSLLV 3214
            + D++++AM++RSTLKLL+ELYYVGV+ED+ IF++I+KDLTS +  KDRDTTQ NL+LL 
Sbjct: 147  EADKNSKAMKKRSTLKLLLELYYVGVIEDSNIFINIIKDLTSVEQLKDRDTTQTNLTLLT 206

Query: 3213 SFARQGRIFLGFPIASQDFQEELYKDLNITMEQKKTLRKAFQQFYDASTDLLQTEHSSLR 3034
            SFARQGRIFLG PI+ QD  E+ +K L++T +QKK+ +KAF  +YDA  DLLQ+EH  L 
Sbjct: 207  SFARQGRIFLGLPISGQD--EDFFKGLDVTADQKKSFKKAFNTYYDALADLLQSEHKLLL 264

Query: 3033 QMEQENAKMLNSKGELSEENANTYEKLRKSYEHLLRSVSSLAEALDMQPPVMPEDSNTTR 2854
            QME+ENAK++N+KGELSE++A++YEKLRKSY+HL R++SSLAEALDMQPPVMPED  TTR
Sbjct: 265  QMEKENAKLVNAKGELSEDSASSYEKLRKSYDHLYRNISSLAEALDMQPPVMPEDG-TTR 323

Query: 2853 VTSTEEGSQANAAKDANALESLWDDDDTKAFYESLPDLRAFVPAVLLGEPEPKA------ 2692
            +T+ +E S +   KD +  E +WDD+DTK FYE LPDLRAFVPAVLLGE EPK+      
Sbjct: 324  LTAGDEASPSGTVKDTSVPEPIWDDEDTKTFYECLPDLRAFVPAVLLGEAEPKSNEQSAK 383

Query: 2691 -----TEQANKVSEQHQ------EQLPXXXXXXXXXXXXTPKEPEVKTAXXXXXXXXXXX 2545
                 +E +++V E  Q      E                PKE E               
Sbjct: 384  AKEKLSESSSEVVENQQTTEDTTEVSADSASMDDRSNAEQPKEKE--------EVEKEKA 435

Query: 2544 XXXXXXXXXXXXXXXXXXXXXXXXKCLDGTSIDTLLQRLPGSVSRDLIDQLTVDFCYLNS 2365
                                    K LD  + + LLQRLPG VSRDLIDQLTV++CYLNS
Sbjct: 436  KDTKKEKGKEKDSEKKMEHEKEKGKSLDVANFERLLQRLPGCVSRDLIDQLTVEYCYLNS 495

Query: 2364 KSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDIASMLLQMLEEEFNFLINKKDQ 2185
            K+NRKKLV+ALFNVPRTSLELL YYSRMVATL++CMKDI SML+QMLE+EFN L++KKDQ
Sbjct: 496  KTNRKKLVKALFNVPRTSLELLAYYSRMVATLASCMKDIPSMLVQMLEDEFNSLVHKKDQ 555

Query: 2184 MNIETKIRNIRFIGELAKFKIAPPGFVFTCLKACLDDFTHHNIDVACNLLETCGRFLFRS 2005
            MNIETKIRNIRFIGEL KFKI P G VF+CLKACLD+FTHHNIDVACNLLETCGRFL+RS
Sbjct: 556  MNIETKIRNIRFIGELCKFKIVPAGLVFSCLKACLDEFTHHNIDVACNLLETCGRFLYRS 615

Query: 2004 PETTTRMTNMLEILMRLKNVKNLDARHSTLVENAYYLCKPPEKSARVAKVRPPLQQYVRK 1825
            PETT RMTNML+ILMRLKNVKNLD R STLVENAYYLCKPPE+SAR++KVRPPL QYVRK
Sbjct: 616  PETTLRMTNMLDILMRLKNVKNLDPRQSTLVENAYYLCKPPERSARISKVRPPLHQYVRK 675

Query: 1824 LLFSDLDKQSIEHVCRQLRKLPWSECEPYVLKCFMKVHRGKYSQVHLIASLTAVLSRYQE 1645
            LLFSDLDK SI +V +QLRKLPWSECE Y+LKCFMKVH+GKY Q+HLIASLT+ LSR+ +
Sbjct: 676  LLFSDLDKDSIANVLKQLRKLPWSECEQYILKCFMKVHKGKYGQIHLIASLTSGLSRHHD 735

Query: 1644 AFSVAVVDEVLEEIRIGLETNEYGTQQRRIAHMRFLGELYNYRLVDSSVIFDTLYLVLFF 1465
             F VAVVDEVLEEIR+GLE NEYG QQ+R+AHMRFLGELYNY  VDSSVIF+TLYL L +
Sbjct: 736  EFVVAVVDEVLEEIRVGLELNEYGAQQKRLAHMRFLGELYNYEHVDSSVIFETLYLTLLY 795

Query: 1464 GHGTPEHDTLDPVEDCFRIRMVITTLQTCGQFFDRGSSKRRLDKFLVFFQRYILSKGAIP 1285
            GH T E + LDP ED FR+RMVI  L+TCG +FDRGSSK+RLD+FL+ FQRYILSKG +P
Sbjct: 796  GHDTSEQEVLDPPEDFFRVRMVIILLETCGHYFDRGSSKKRLDQFLIHFQRYILSKGHLP 855

Query: 1284 LDVEFDLQDLFDDLRPKMVRFXXXXXXXXXXXXXXXXXSHVCSEKTNSDHKYSDTEGVKS 1105
            LD+EFDLQDLF +LRP M R+                  H  S    S  ++SDT+    
Sbjct: 856  LDIEFDLQDLFANLRPNMTRY-STIDEVNAAILQLEEREHASSGDKVSIERHSDTKPSNK 914

Query: 1104 SGATVLVTGNGKAVVNGTDELGIDYVDTESELXXXXXXXXXXXXXXXXXXEKYVDHXXXX 925
            S + V ++ NGK+      E G    +   E                       +H    
Sbjct: 915  SSSDV-ISSNGKSTAKDIRENG----EAHGEESDSDSGSGSVVRDGQNEELDDGNHERGS 969

Query: 924  XXXXXXXXXXDPMASEEEEDVQVRQKKSLEVDPKEEADFERELRAIMQESLDSRRLELRT 745
                            +++  +VRQ K + VD +E+ADF++EL+A++QES++ R+LELR 
Sbjct: 970  ESGDGDDYDDGDGPGSDDDKFRVRQ-KVVTVDLEEQADFDQELKALLQESMEQRKLELRG 1028

Query: 744  RPTLNMAIPMNIFEGS-KEHSRATEI--ESGDEVIDDESG-NNSVSVRVLVKRGNKQQAK 577
            RP LNM IPM++FEGS K+H     +  E+G+EV+D+E+G    V V+VLVKRGNKQQ +
Sbjct: 1029 RPALNMTIPMSVFEGSGKDHHHFGRVVGENGEEVLDEENGEQREVQVKVLVKRGNKQQTR 1088

Query: 576  QLYIPRDCSLVQSSXXXXXXXXXXXQDIKRLVLEYNEREEDDASAATMQPPHWPTVNSGV 397
            Q+ IP DC+LVQS+           QDIKRLVLEYNER+E++A+    Q  +W +  S  
Sbjct: 1089 QMLIPSDCALVQSTKQKEAAELEEKQDIKRLVLEYNERDEEEANGLGTQILNWTSGGSRG 1148

Query: 396  PSRYHSGRGLWDGYGRSHGGRQRYHH 319
             +R        +G G+S G R R+++
Sbjct: 1149 STR------TGEGSGKSGGSRHRFYY 1168