BLASTX nr result
ID: Ephedra28_contig00016497
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00016497
(395 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE76957.1| unknown [Picea sitchensis] 64 2e-08
ref|XP_006856503.1| hypothetical protein AMTR_s00046p00089870 [A... 62 6e-08
ref|XP_006465317.1| PREDICTED: pre-mRNA-processing-splicing fact... 62 8e-08
ref|XP_006427298.1| hypothetical protein CICLE_v10024683mg [Citr... 62 8e-08
ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact... 62 1e-07
ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing fact... 62 1e-07
ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putativ... 62 1e-07
ref|XP_002327417.1| predicted protein [Populus trichocarpa] gi|5... 62 1e-07
emb|CAN66492.1| hypothetical protein VITISV_019851 [Vitis vinifera] 62 1e-07
ref|XP_006389749.1| hypothetical protein EUTSA_v10017992mg [Eutr... 59 7e-07
ref|XP_006300376.1| hypothetical protein CARUB_v10019647mg [Caps... 59 7e-07
ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro... 59 7e-07
ref|XP_004135844.1| PREDICTED: pre-mRNA-processing-splicing fact... 59 7e-07
ref|NP_178124.2| putative splicing factor Prp8 [Arabidopsis thal... 59 7e-07
ref|XP_006361638.1| PREDICTED: pre-mRNA-processing-splicing fact... 59 9e-07
ref|XP_004242824.1| PREDICTED: pre-mRNA-processing-splicing fact... 59 9e-07
gb|EMJ16092.1| hypothetical protein PRUPE_ppa000032mg [Prunus pe... 58 1e-06
ref|XP_002889313.1| hypothetical protein ARALYDRAFT_477251 [Arab... 58 1e-06
ref|XP_001768223.1| predicted protein [Physcomitrella patens] gi... 58 1e-06
ref|XP_001785044.1| predicted protein [Physcomitrella patens] gi... 58 1e-06
>gb|ADE76957.1| unknown [Picea sitchensis]
Length = 422
Score = 64.3 bits (155), Expect = 2e-08
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HTVSM+YG++ G PRDFYHE+H PTHFLEFSNL
Sbjct: 375 HTVSMKYGIKLGAPRDFYHEDHRPTHFLEFSNL 407
>ref|XP_006856503.1| hypothetical protein AMTR_s00046p00089870 [Amborella trichopoda]
gi|548860384|gb|ERN17970.1| hypothetical protein
AMTR_s00046p00089870 [Amborella trichopoda]
Length = 2348
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HTVSM+Y V+ G PRDFYHE+H PTHFLEFSNL
Sbjct: 2301 HTVSMKYNVKLGTPRDFYHEDHRPTHFLEFSNL 2333
>ref|XP_006465317.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform X1
[Citrus sinensis] gi|568821763|ref|XP_006465318.1|
PREDICTED: pre-mRNA-processing-splicing factor 8-like
isoform X2 [Citrus sinensis]
Length = 2357
Score = 62.0 bits (149), Expect = 8e-08
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HTVSM+YGV+ G PR++YHE+H PTHFLEFSNL
Sbjct: 2310 HTVSMKYGVKLGTPREYYHEDHRPTHFLEFSNL 2342
>ref|XP_006427298.1| hypothetical protein CICLE_v10024683mg [Citrus clementina]
gi|557529288|gb|ESR40538.1| hypothetical protein
CICLE_v10024683mg [Citrus clementina]
Length = 2357
Score = 62.0 bits (149), Expect = 8e-08
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HTVSM+YGV+ G PR++YHE+H PTHFLEFSNL
Sbjct: 2310 HTVSMKYGVKLGTPREYYHEDHRPTHFLEFSNL 2342
>ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1
[Vitis vinifera]
Length = 2367
Score = 61.6 bits (148), Expect = 1e-07
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HTVSM+YG++ G PR++YHE+H PTHFLEFSNL
Sbjct: 2320 HTVSMKYGIKLGTPREYYHEDHRPTHFLEFSNL 2352
>ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 2
[Vitis vinifera] gi|297743472|emb|CBI36339.3| unnamed
protein product [Vitis vinifera]
Length = 2347
Score = 61.6 bits (148), Expect = 1e-07
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HTVSM+YG++ G PR++YHE+H PTHFLEFSNL
Sbjct: 2300 HTVSMKYGIKLGTPREYYHEDHRPTHFLEFSNL 2332
>ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putative [Ricinus communis]
gi|223543286|gb|EEF44818.1| Pre-mRNA-processing-splicing
factor, putative [Ricinus communis]
Length = 2376
Score = 61.6 bits (148), Expect = 1e-07
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HTVSM+YG++ G PR++YHE+H PTHFLEFSNL
Sbjct: 2329 HTVSMKYGIKLGTPREYYHEDHRPTHFLEFSNL 2361
>ref|XP_002327417.1| predicted protein [Populus trichocarpa]
gi|566160511|ref|XP_006385305.1| embryo defective 14
family protein [Populus trichocarpa]
gi|550342246|gb|ERP63102.1| embryo defective 14 family
protein [Populus trichocarpa]
Length = 2357
Score = 61.6 bits (148), Expect = 1e-07
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HTVSM+YG++ G PR++YHE+H PTHFLEFSNL
Sbjct: 2310 HTVSMKYGIKLGTPREYYHEDHRPTHFLEFSNL 2342
>emb|CAN66492.1| hypothetical protein VITISV_019851 [Vitis vinifera]
Length = 2294
Score = 61.6 bits (148), Expect = 1e-07
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HTVSM+YG++ G PR++YHE+H PTHFLEFSNL
Sbjct: 2247 HTVSMKYGIKLGTPREYYHEDHRPTHFLEFSNL 2279
>ref|XP_006389749.1| hypothetical protein EUTSA_v10017992mg [Eutrema salsugineum]
gi|557086183|gb|ESQ27035.1| hypothetical protein
EUTSA_v10017992mg [Eutrema salsugineum]
Length = 2361
Score = 58.9 bits (141), Expect = 7e-07
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HTVSM+Y V+ G P+++YHEEH PTHFLEFSN+
Sbjct: 2314 HTVSMKYNVKLGSPKEYYHEEHRPTHFLEFSNM 2346
>ref|XP_006300376.1| hypothetical protein CARUB_v10019647mg [Capsella rubella]
gi|482569086|gb|EOA33274.1| hypothetical protein
CARUB_v10019647mg [Capsella rubella]
Length = 2361
Score = 58.9 bits (141), Expect = 7e-07
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HTVSM+Y V+ G P+++YHEEH PTHFLEFSN+
Sbjct: 2314 HTVSMKYSVKLGSPKEYYHEEHRPTHFLEFSNM 2346
>ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor
8-like [Cucumis sativus]
Length = 2347
Score = 58.9 bits (141), Expect = 7e-07
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HT M+YGV+ G PR++YHE+H PTHFLEFSNL
Sbjct: 2300 HTAGMKYGVKLGTPREYYHEDHRPTHFLEFSNL 2332
>ref|XP_004135844.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Cucumis
sativus]
Length = 2347
Score = 58.9 bits (141), Expect = 7e-07
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HT M+YGV+ G PR++YHE+H PTHFLEFSNL
Sbjct: 2300 HTAGMKYGVKLGTPREYYHEDHRPTHFLEFSNL 2332
>ref|NP_178124.2| putative splicing factor Prp8 [Arabidopsis thaliana]
gi|5902365|gb|AAD55467.1|AC009322_7 Putative splicing
factor Prp8 [Arabidopsis thaliana]
gi|332198232|gb|AEE36353.1| Pre-mRNA-processing-splicing
factor [Arabidopsis thaliana]
Length = 2359
Score = 58.9 bits (141), Expect = 7e-07
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HT+SM+Y V+ G P++FYHEEH PTHFLEFSN+
Sbjct: 2312 HTLSMKYSVKLGSPKEFYHEEHRPTHFLEFSNM 2344
>ref|XP_006361638.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Solanum
tuberosum]
Length = 2389
Score = 58.5 bits (140), Expect = 9e-07
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HTVSM+YGV+ G PR++Y+E+H PTHFLEFSN+
Sbjct: 2342 HTVSMKYGVKLGTPREYYNEDHRPTHFLEFSNM 2374
>ref|XP_004242824.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Solanum
lycopersicum]
Length = 2384
Score = 58.5 bits (140), Expect = 9e-07
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HTVSM+YGV+ G PR++Y+E+H PTHFLEFSN+
Sbjct: 2337 HTVSMKYGVKLGTPREYYNEDHRPTHFLEFSNM 2369
>gb|EMJ16092.1| hypothetical protein PRUPE_ppa000032mg [Prunus persica]
Length = 2310
Score = 58.2 bits (139), Expect = 1e-06
Identities = 22/33 (66%), Positives = 29/33 (87%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HT SM+YG++ G PR++YHE+H PTH+LEFSNL
Sbjct: 2263 HTPSMKYGIKLGTPREYYHEDHRPTHYLEFSNL 2295
>ref|XP_002889313.1| hypothetical protein ARALYDRAFT_477251 [Arabidopsis lyrata subsp.
lyrata] gi|297335154|gb|EFH65572.1| hypothetical protein
ARALYDRAFT_477251 [Arabidopsis lyrata subsp. lyrata]
Length = 2381
Score = 58.2 bits (139), Expect = 1e-06
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
HTVSM Y V+ G P+++YHEEH PTHFLEFSN+
Sbjct: 2334 HTVSMNYSVKLGSPKEYYHEEHRPTHFLEFSNM 2366
>ref|XP_001768223.1| predicted protein [Physcomitrella patens] gi|162680401|gb|EDQ66837.1|
predicted protein [Physcomitrella patens]
Length = 2358
Score = 57.8 bits (138), Expect = 1e-06
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
H+V M+YG++ PR+FYHE+H PTHFLEFSNL
Sbjct: 2311 HSVGMKYGIKLSIPREFYHEDHRPTHFLEFSNL 2343
>ref|XP_001785044.1| predicted protein [Physcomitrella patens] gi|162663393|gb|EDQ50159.1|
predicted protein [Physcomitrella patens]
Length = 2334
Score = 57.8 bits (138), Expect = 1e-06
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = +1
Query: 1 HTVSMRYGVRPGYPRDFYHEEHMPTHFLEFSNL 99
H+V M+YG++ PR+FYHE+H PTHFLEFSNL
Sbjct: 2287 HSVGMKYGIKLSIPREFYHEDHRPTHFLEFSNL 2319