BLASTX nr result
ID: Ephedra28_contig00016496
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00016496
(511 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE76957.1| unknown [Picea sitchensis] 88 1e-15
ref|XP_006856503.1| hypothetical protein AMTR_s00046p00089870 [A... 86 4e-15
ref|XP_006465317.1| PREDICTED: pre-mRNA-processing-splicing fact... 86 5e-15
ref|XP_006427298.1| hypothetical protein CICLE_v10024683mg [Citr... 86 5e-15
ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact... 86 7e-15
ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing fact... 86 7e-15
ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putativ... 86 7e-15
ref|XP_002327417.1| predicted protein [Populus trichocarpa] gi|5... 86 7e-15
emb|CAN66492.1| hypothetical protein VITISV_019851 [Vitis vinifera] 86 7e-15
ref|XP_006389749.1| hypothetical protein EUTSA_v10017992mg [Eutr... 83 4e-14
ref|XP_006300376.1| hypothetical protein CARUB_v10019647mg [Caps... 83 4e-14
ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro... 83 4e-14
ref|XP_004135844.1| PREDICTED: pre-mRNA-processing-splicing fact... 83 4e-14
ref|XP_006361638.1| PREDICTED: pre-mRNA-processing-splicing fact... 82 6e-14
ref|XP_004242824.1| PREDICTED: pre-mRNA-processing-splicing fact... 82 6e-14
gb|EMJ16092.1| hypothetical protein PRUPE_ppa000032mg [Prunus pe... 82 7e-14
ref|XP_002889313.1| hypothetical protein ARALYDRAFT_477251 [Arab... 82 7e-14
ref|XP_001768223.1| predicted protein [Physcomitrella patens] gi... 82 1e-13
ref|XP_001785044.1| predicted protein [Physcomitrella patens] gi... 82 1e-13
gb|EOY25843.1| Pre-mRNA-processing-splicing factor isoform 1 [Th... 81 1e-13
>gb|ADE76957.1| unknown [Picea sitchensis]
Length = 422
Score = 88.2 bits (217), Expect = 1e-15
Identities = 36/42 (85%), Positives = 40/42 (95%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHTVSM+YG++ G PRDFYHE+HRPTHFLEFSNL
Sbjct: 366 WNYNFMGVKHTVSMKYGIKLGAPRDFYHEDHRPTHFLEFSNL 407
>ref|XP_006856503.1| hypothetical protein AMTR_s00046p00089870 [Amborella trichopoda]
gi|548860384|gb|ERN17970.1| hypothetical protein
AMTR_s00046p00089870 [Amborella trichopoda]
Length = 2348
Score = 86.3 bits (212), Expect = 4e-15
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHTVSM+Y V+ G PRDFYHE+HRPTHFLEFSNL
Sbjct: 2292 WNYNFMGVKHTVSMKYNVKLGTPRDFYHEDHRPTHFLEFSNL 2333
>ref|XP_006465317.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform X1
[Citrus sinensis] gi|568821763|ref|XP_006465318.1|
PREDICTED: pre-mRNA-processing-splicing factor 8-like
isoform X2 [Citrus sinensis]
Length = 2357
Score = 85.9 bits (211), Expect = 5e-15
Identities = 35/42 (83%), Positives = 40/42 (95%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHTVSM+YGV+ G PR++YHE+HRPTHFLEFSNL
Sbjct: 2301 WNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRPTHFLEFSNL 2342
>ref|XP_006427298.1| hypothetical protein CICLE_v10024683mg [Citrus clementina]
gi|557529288|gb|ESR40538.1| hypothetical protein
CICLE_v10024683mg [Citrus clementina]
Length = 2357
Score = 85.9 bits (211), Expect = 5e-15
Identities = 35/42 (83%), Positives = 40/42 (95%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHTVSM+YGV+ G PR++YHE+HRPTHFLEFSNL
Sbjct: 2301 WNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRPTHFLEFSNL 2342
>ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1
[Vitis vinifera]
Length = 2367
Score = 85.5 bits (210), Expect = 7e-15
Identities = 34/42 (80%), Positives = 40/42 (95%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHTVSM+YG++ G PR++YHE+HRPTHFLEFSNL
Sbjct: 2311 WNYNFMGVKHTVSMKYGIKLGTPREYYHEDHRPTHFLEFSNL 2352
>ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 2
[Vitis vinifera] gi|297743472|emb|CBI36339.3| unnamed
protein product [Vitis vinifera]
Length = 2347
Score = 85.5 bits (210), Expect = 7e-15
Identities = 34/42 (80%), Positives = 40/42 (95%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHTVSM+YG++ G PR++YHE+HRPTHFLEFSNL
Sbjct: 2291 WNYNFMGVKHTVSMKYGIKLGTPREYYHEDHRPTHFLEFSNL 2332
>ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putative [Ricinus communis]
gi|223543286|gb|EEF44818.1| Pre-mRNA-processing-splicing
factor, putative [Ricinus communis]
Length = 2376
Score = 85.5 bits (210), Expect = 7e-15
Identities = 34/42 (80%), Positives = 40/42 (95%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHTVSM+YG++ G PR++YHE+HRPTHFLEFSNL
Sbjct: 2320 WNYNFMGVKHTVSMKYGIKLGTPREYYHEDHRPTHFLEFSNL 2361
>ref|XP_002327417.1| predicted protein [Populus trichocarpa]
gi|566160511|ref|XP_006385305.1| embryo defective 14
family protein [Populus trichocarpa]
gi|550342246|gb|ERP63102.1| embryo defective 14 family
protein [Populus trichocarpa]
Length = 2357
Score = 85.5 bits (210), Expect = 7e-15
Identities = 34/42 (80%), Positives = 40/42 (95%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHTVSM+YG++ G PR++YHE+HRPTHFLEFSNL
Sbjct: 2301 WNYNFMGVKHTVSMKYGIKLGTPREYYHEDHRPTHFLEFSNL 2342
>emb|CAN66492.1| hypothetical protein VITISV_019851 [Vitis vinifera]
Length = 2294
Score = 85.5 bits (210), Expect = 7e-15
Identities = 34/42 (80%), Positives = 40/42 (95%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHTVSM+YG++ G PR++YHE+HRPTHFLEFSNL
Sbjct: 2238 WNYNFMGVKHTVSMKYGIKLGTPREYYHEDHRPTHFLEFSNL 2279
>ref|XP_006389749.1| hypothetical protein EUTSA_v10017992mg [Eutrema salsugineum]
gi|557086183|gb|ESQ27035.1| hypothetical protein
EUTSA_v10017992mg [Eutrema salsugineum]
Length = 2361
Score = 82.8 bits (203), Expect = 4e-14
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHTVSM+Y V+ G P+++YHEEHRPTHFLEFSN+
Sbjct: 2305 WNYNFMGVKHTVSMKYNVKLGSPKEYYHEEHRPTHFLEFSNM 2346
>ref|XP_006300376.1| hypothetical protein CARUB_v10019647mg [Capsella rubella]
gi|482569086|gb|EOA33274.1| hypothetical protein
CARUB_v10019647mg [Capsella rubella]
Length = 2361
Score = 82.8 bits (203), Expect = 4e-14
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHTVSM+Y V+ G P+++YHEEHRPTHFLEFSN+
Sbjct: 2305 WNYNFMGVKHTVSMKYSVKLGSPKEYYHEEHRPTHFLEFSNM 2346
>ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor
8-like [Cucumis sativus]
Length = 2347
Score = 82.8 bits (203), Expect = 4e-14
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHT M+YGV+ G PR++YHE+HRPTHFLEFSNL
Sbjct: 2291 WNYNFMGVKHTAGMKYGVKLGTPREYYHEDHRPTHFLEFSNL 2332
>ref|XP_004135844.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Cucumis
sativus]
Length = 2347
Score = 82.8 bits (203), Expect = 4e-14
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHT M+YGV+ G PR++YHE+HRPTHFLEFSNL
Sbjct: 2291 WNYNFMGVKHTAGMKYGVKLGTPREYYHEDHRPTHFLEFSNL 2332
>ref|XP_006361638.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Solanum
tuberosum]
Length = 2389
Score = 82.4 bits (202), Expect = 6e-14
Identities = 33/42 (78%), Positives = 40/42 (95%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHTVSM+YGV+ G PR++Y+E+HRPTHFLEFSN+
Sbjct: 2333 WNYNFMGVKHTVSMKYGVKLGTPREYYNEDHRPTHFLEFSNM 2374
>ref|XP_004242824.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Solanum
lycopersicum]
Length = 2384
Score = 82.4 bits (202), Expect = 6e-14
Identities = 33/42 (78%), Positives = 40/42 (95%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHTVSM+YGV+ G PR++Y+E+HRPTHFLEFSN+
Sbjct: 2328 WNYNFMGVKHTVSMKYGVKLGTPREYYNEDHRPTHFLEFSNM 2369
>gb|EMJ16092.1| hypothetical protein PRUPE_ppa000032mg [Prunus persica]
Length = 2310
Score = 82.0 bits (201), Expect = 7e-14
Identities = 32/42 (76%), Positives = 39/42 (92%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHT SM+YG++ G PR++YHE+HRPTH+LEFSNL
Sbjct: 2254 WNYNFMGVKHTPSMKYGIKLGTPREYYHEDHRPTHYLEFSNL 2295
>ref|XP_002889313.1| hypothetical protein ARALYDRAFT_477251 [Arabidopsis lyrata subsp.
lyrata] gi|297335154|gb|EFH65572.1| hypothetical protein
ARALYDRAFT_477251 [Arabidopsis lyrata subsp. lyrata]
Length = 2381
Score = 82.0 bits (201), Expect = 7e-14
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHTVSM Y V+ G P+++YHEEHRPTHFLEFSN+
Sbjct: 2325 WNYNFMGVKHTVSMNYSVKLGSPKEYYHEEHRPTHFLEFSNM 2366
>ref|XP_001768223.1| predicted protein [Physcomitrella patens] gi|162680401|gb|EDQ66837.1|
predicted protein [Physcomitrella patens]
Length = 2358
Score = 81.6 bits (200), Expect = 1e-13
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKH+V M+YG++ PR+FYHE+HRPTHFLEFSNL
Sbjct: 2302 WNYNFMGVKHSVGMKYGIKLSIPREFYHEDHRPTHFLEFSNL 2343
>ref|XP_001785044.1| predicted protein [Physcomitrella patens] gi|162663393|gb|EDQ50159.1|
predicted protein [Physcomitrella patens]
Length = 2334
Score = 81.6 bits (200), Expect = 1e-13
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKH+V M+YG++ PR+FYHE+HRPTHFLEFSNL
Sbjct: 2278 WNYNFMGVKHSVGMKYGIKLSIPREFYHEDHRPTHFLEFSNL 2319
>gb|EOY25843.1| Pre-mRNA-processing-splicing factor isoform 1 [Theobroma cacao]
gi|508778588|gb|EOY25844.1| Pre-mRNA-processing-splicing
factor isoform 1 [Theobroma cacao]
Length = 2354
Score = 81.3 bits (199), Expect = 1e-13
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +3
Query: 3 WNYNFMGVKHTVSMRYGVRPGYPRDFYHEEHRPTHFLEFSNL 128
WNYNFMGVKHTVSM+YGV+ G PR++Y E+HRPTH+LEFSNL
Sbjct: 2298 WNYNFMGVKHTVSMKYGVKLGPPREYYQEDHRPTHYLEFSNL 2339