BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00016261
         (471 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006849443.1| hypothetical protein AMTR_s00024p00059840 [A...    72   1e-10
ref|XP_006854080.1| hypothetical protein AMTR_s00048p00122750 [A...    71   2e-10
emb|CCA61109.1| RCD1 protein [Hordeum vulgare]                         60   4e-07
dbj|BAJ95231.1| predicted protein [Hordeum vulgare subsp. vulgar...    60   4e-07
ref|XP_004165873.1| PREDICTED: inactive poly [ADP-ribose] polyme...    58   1e-06
ref|XP_004150664.1| PREDICTED: inactive poly [ADP-ribose] polyme...    58   1e-06
ref|XP_006361265.1| PREDICTED: inactive poly [ADP-ribose] polyme...    57   2e-06
ref|XP_006844999.1| hypothetical protein AMTR_s00058p00198960 [A...    57   2e-06
gb|AEK94072.1| SRO1 [Thinopyrum ponticum x Triticum aestivum]          57   3e-06

>ref|XP_006849443.1| hypothetical protein AMTR_s00024p00059840 [Amborella trichopoda]
            gi|548853018|gb|ERN11024.1| hypothetical protein
            AMTR_s00024p00059840 [Amborella trichopoda]
          Length = 733

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
 Frame = -1

Query: 468  ATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNASNPTCYFLRRES 289
            A Y  V+++G Q M+  ++I+G++ +    +EQ    + ++ +  D+  NP  Y +    
Sbjct: 525  ANYCDVDENGVQHMVLCRIIMGNMEQVQPGAEQFHPSSEKFDSGVDDLQNPKHYIIWSTH 584

Query: 288  IRARFMPEYVIIFKISPLETEYWAKAQEIARTVN-PHDNAPNDKLDREPT-------GEM 133
            +     PEYV+ FK+ P   EYW   +     V  P     + +L  E +       G+ 
Sbjct: 585  MNTHIYPEYVVSFKVPPNIQEYWGGLKGTWSPVGVPRVPLRDSQLKHEASSVDLARDGQK 644

Query: 132  EKKPKDSREDVQKTTVNPKKRPRSAWMSFPLLLSEVERFLTTAE 1
                K S E +Q+      K P SAWM FP+L + +E+ ++  +
Sbjct: 645  SDILKGSEEKLQENVPKTVKMPTSAWMPFPVLFAAIEKNISPVD 688


>ref|XP_006854080.1| hypothetical protein AMTR_s00048p00122750 [Amborella trichopoda]
           gi|548857749|gb|ERN15547.1| hypothetical protein
           AMTR_s00048p00122750 [Amborella trichopoda]
          Length = 607

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
 Frame = -1

Query: 468 ATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNASNPTCYFLRRES 289
           A    V+++G Q M+   +I+G++ +  S SEQ    N  + +  DN  NP CY +    
Sbjct: 392 ARSCDVDENGMQHMVLCCVIMGNMEQVQSGSEQFHPGNENFDSGVDNHENPKCYIVWNTH 451

Query: 288 IRARFMPEYVIIFKISPLETEYWAKAQE---IARTVNPHDNAP-NDKLDREP-TGEMEKK 124
           +     PEYV+ FK+ P   EY A  +E    A T    D+   N K  +EP T ++ + 
Sbjct: 452 MNTHIYPEYVVSFKVPPSAREYLAGIRENESKADTSRVADSTVFNSKSQQEPFTVDLARN 511

Query: 123 PKDSREDVQKT-------TVNPKKRPRSAWMSFPLLLSEVERFLTTAE 1
            ++    V+K+        +  ++ P SAWM FP+L + V   ++ ++
Sbjct: 512 SQNLASHVEKSQEKSRGIALGARRMPLSAWMPFPVLFAAVSNKISPSD 559


>emb|CCA61109.1| RCD1 protein [Hordeum vulgare]
          Length = 579

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/148 (19%), Positives = 67/148 (45%)
 Frame = -1

Query: 468 ATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNASNPTCYFLRRES 289
           A+Y+ ++++G   MM  ++I+G++      S+Q    NG + +  D+   P  Y +   +
Sbjct: 355 ASYSDIDENGIMRMMLCRVIMGNVEVVLPGSKQFQPTNGTFDSGVDDLQKPKHYIIWDAN 414

Query: 288 IRARFMPEYVIIFKISPLETEYWAKAQEIARTVNPHDNAPNDKLDREPTGEMEKKPKDSR 109
           +      EY ++ K   +  EY A+    +      ++   + + ++ + E    P D +
Sbjct: 415 VHRHIYAEYAVLIKAPSMTNEYLAREDTASNVSEIRNSGSEESVIKDDSSESLASPADKQ 474

Query: 108 EDVQKTTVNPKKRPRSAWMSFPLLLSEV 25
           +  +      ++ P S WM  P+L + +
Sbjct: 475 QAPRFGRAPTRRPPTSPWMPLPMLFAAI 502


>dbj|BAJ95231.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326527769|dbj|BAJ88957.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 579

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/148 (19%), Positives = 67/148 (45%)
 Frame = -1

Query: 468 ATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNASNPTCYFLRRES 289
           A+Y+ ++++G   MM  ++I+G++      S+Q    NG + +  D+   P  Y +   +
Sbjct: 355 ASYSDIDENGIMRMMLCRVIMGNVEVVLPGSKQFQPTNGTFDSGVDDLQKPKHYIIWDAN 414

Query: 288 IRARFMPEYVIIFKISPLETEYWAKAQEIARTVNPHDNAPNDKLDREPTGEMEKKPKDSR 109
           +      EY ++ K   +  EY A+    +      ++   + + ++ + E    P D +
Sbjct: 415 VHRHIYAEYAVLIKAPSMTNEYLAREDTASNVSEIRNSGSEESVIKDDSSESLASPADKQ 474

Query: 108 EDVQKTTVNPKKRPRSAWMSFPLLLSEV 25
           +  +      ++ P S WM  P+L + +
Sbjct: 475 QAPRFGRAPTRRPPTSPWMPLPMLFAAI 502


>ref|XP_004165873.1| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Cucumis
           sativus]
          Length = 601

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
 Frame = -1

Query: 468 ATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNASNPTCYFLRRES 289
           A++  ++ +G Q ++F ++ILG++    S S Q    +  + +  DN + PT Y + R +
Sbjct: 390 ASHCDIDDNGVQHLVFCRVILGNMELLRSGSRQFYPSSKDFDSGVDNLTKPTYYVIWRMN 449

Query: 288 IRARFMPEYVIIFKISPLETEYWAKAQEIARTVNPHDNAPND-KLDREPTGEM--EKKPK 118
           +     PE V+ FK++P   +  ++  ++         +PN  +L+      +  + +P 
Sbjct: 450 MNTHIYPESVVTFKVAP-NPKVESRTNDVLGITASRQGSPNQIQLESSVVNAVCGDGQPS 508

Query: 117 D---SREDVQKTTVNPKKRPRSAWMSFPLLLSEV 25
           D   S E       N  K P+S WMSF +L + +
Sbjct: 509 DVCRSNERAVSVGSNSVKTPKSPWMSFSMLFAAI 542


>ref|XP_004150664.1| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Cucumis
           sativus]
          Length = 601

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
 Frame = -1

Query: 468 ATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNASNPTCYFLRRES 289
           A++  ++ +G Q ++F ++ILG++    S S Q    +  + +  DN + PT Y + R +
Sbjct: 390 ASHCDIDDNGVQHLVFCRVILGNMELLRSGSRQFYPSSKDFDSGVDNLTKPTYYVIWRMN 449

Query: 288 IRARFMPEYVIIFKISPLETEYWAKAQEIARTVNPHDNAPND-KLDREPTGEM--EKKPK 118
           +     PE V+ FK++P   +  ++  ++         +PN  +L+      +  + +P 
Sbjct: 450 MNTHIYPESVVTFKVAP-NPKVESRTNDVLGITASRQGSPNQIQLESSVVNAVCGDGQPS 508

Query: 117 D---SREDVQKTTVNPKKRPRSAWMSFPLLLSEV 25
           D   S E       N  K P+S WMSF +L + +
Sbjct: 509 DVCRSNERAVSVGSNSVKTPKSPWMSFSMLFAAI 542


>ref|XP_006361265.1| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like isoform
           X1 [Solanum tuberosum] gi|565391106|ref|XP_006361266.1|
           PREDICTED: inactive poly [ADP-ribose] polymerase
           RCD1-like isoform X2 [Solanum tuberosum]
          Length = 600

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 5/155 (3%)
 Frame = -1

Query: 468 ATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNASNPTCYFLRRES 289
           A Y+ V+++G Q M+  ++I+G++      S Q    +  +    D+  NP CY +   +
Sbjct: 381 AKYSDVDENGVQYMILCRVIMGNMELVCPGSNQFHPSSEDFDNGVDSVENPKCYVVWTMN 440

Query: 288 IRARFMPEYVIIFKISPLETEYWA-----KAQEIARTVNPHDNAPNDKLDREPTGEMEKK 124
           +     PEYV+ FK SP    Y           +     P D  P D L      +    
Sbjct: 441 MSTHIFPEYVVSFKFSPDSEGYLVGNKSPNVSAVTSCQGPVDQLPADTLPAVLGSDC--- 497

Query: 123 PKDSREDVQKTTVNPKKRPRSAWMSFPLLLSEVER 19
               +  +   +    + P+S WM FP+L + + R
Sbjct: 498 ---YQNSLGLASKKASRTPKSPWMPFPMLFAAISR 529


>ref|XP_006844999.1| hypothetical protein AMTR_s00058p00198960 [Amborella trichopoda]
           gi|548847490|gb|ERN06674.1| hypothetical protein
           AMTR_s00058p00198960 [Amborella trichopoda]
          Length = 409

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
 Frame = -1

Query: 462 YASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNASNPTCYFLRRESIR 283
           Y++V+  G+Q M+  ++I+G++    + SEQ    + ++ +  DN   P+ Y +    + 
Sbjct: 168 YSNVDDDGQQHMLLCRVIMGNMELVPTGSEQFHPSSEEFDSGVDNPITPSRYIVWSTHMN 227

Query: 282 ARFMPEYVIIFKISP------LETEYW-AKAQEIARTVNPH--DNAPNDKLDREPTGEME 130
              +PEYV+ FK+S       L    W A + E     NPH   N+P   +  +     +
Sbjct: 228 THILPEYVVSFKVSHPHLTKLLSLRNWKADSMESLIASNPHVFGNSPGKWMQLQ-----Q 282

Query: 129 KKPKDSREDVQKTT--VNPKKRPRSAWMSFPLLLS 31
           KKP      V       +  ++P SAWM FP L+S
Sbjct: 283 KKPAKVPFVVAHHVKGESAARKPSSAWMPFPRLIS 317


>gb|AEK94072.1| SRO1 [Thinopyrum ponticum x Triticum aestivum]
          Length = 578

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/148 (18%), Positives = 67/148 (45%)
 Frame = -1

Query: 468 ATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNASNPTCYFLRRES 289
           A+Y+ ++++G   MM  ++I+G++      S+Q    N ++ +  D+   P  Y +   +
Sbjct: 355 ASYSDIDENGIMRMMLCRVIMGNVEVVLPGSKQFQPTNERFDSGVDDLQKPKHYIIWDAN 414

Query: 288 IRARFMPEYVIIFKISPLETEYWAKAQEIARTVNPHDNAPNDKLDREPTGEMEKKPKDSR 109
           +      EY ++ K   +  EY A+    +      ++   + + ++ + E    P D +
Sbjct: 415 VHRHIYAEYAVVIKAPSMTNEYLAREDTASNISEIRNSGSAESVIKDDSSETMASPADKQ 474

Query: 108 EDVQKTTVNPKKRPRSAWMSFPLLLSEV 25
           +  +      ++ P S WM  P+L + +
Sbjct: 475 QAPRFGRAPTRRPPTSPWMPLPMLFAAI 502